Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001418.1

Orthogroup ID

OG0008410

Physical Location & Seq

Genomic Coordinates Forward (+)

70022 .. 75230

Gene Structure 5209 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001418.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

atggagaaaccgaaaggcgaagcctcgaagattccggcagcggcgaatcctctggccgaggaaccgattaagattgcgtccaacatcaattaccacgcgaatttcagccctcacttctcgccgttcaagttcgagccggagcaagcctactacgccaccgccgagagcgtccgtgaccgtctgatccgaaattggaacgagacgtacctgcatttccacaggaagaatccgaagcagacctactacttgtccatggagtatcttcaaggacgagccttgaccaatgccattgggaatttgaacgttcagagtgcctatgctgaagctttgaataagttgggccatgagctcgagaatataaccgagcaggaaaaagatgctgcacttggaaatggtggcctgggaaggcttgcttcgtgctttctagactccatggcaacattaaatttgccggcttgggggtatggtttgaggtacagatacgggctgttcaagcaacggattggcaaggatggccaagaagaaactgctgaggattggctagagaaatttagcccttgggaagtagtcaggcatgatgttgtatatccagtcaggttctttggtcaagttcatgttaatcctgatggatcgcgaaaatgggttgagggagaggttctgcaagctctggcttatgatgccaatacttttgaatttatgcagaaatttagcccttgggaagtagtcaggcatgatgttgtatatccagtcaggttctttggtcatgttcatgttaatcctgatggatcgcgaaaatgggttgagggagaggttctgcaagctctggcttatgatgtgccaattccaggatacaaaaccaagaacactattagtcttcgtctatgggacgccaaagcatcttccgaggattttaacctctttaagtttaatgatggtcaatatgaacctgctgctcagcttcattctcgagctcaacagatttgtgctgttttatatcctggagatgctacagaagaagggaaacttttacgtctgaagcaacaattcttcctctgcagtgcatcgcttcaggacattattttcagattcaaggagaggaaacaaggggcggaattgaaatggtccgagtttccaaccaaggttgctgtccaaatgaatgatactcatcctacacttgcaattccggagctaatgcgattgctcttggatgaggaaggacttgggtgggatgaggcatgggatgtgacaacaaggactgttgcttatactaatcacacagtccttcctgaagcacttgagaaatggtcacagactgtcatgtggaagcttcttcctcgccatatggaaatcatacaagaaattgacaaaaggttcattgacatggtgcgtgctacacggacagatcttgagagtaaaattcccactatgtgcgtcttggataacaatccccaaaagcctgttgtcaggatggctaatttatgtgtggtgtctggacatacggttaatggtgttgctgagttgcatagtgacattttaaagaatgagttatttgcagactatgtctcactatggccatccaagttccagaacaaaactaacgggattactcctcggcggtggctgaagttctgcagtcctgagctcagtgatataatcaccaaatggttaaaaacggatgaatgggcaaccaacctggacctacttgtcggtcttcgaaagttagctgatgatgcaaaattacaagaggaatgggcgtctgccaagatggctaataagaagcgtttggcacagtacatagagcatgtgacaggtgtcaagattgacccaaacactctttttgacatacaagtgaagcggattcatgagtataaaagacagttgcttaatattctgggtgcaatttatagatataagaagctaaaggagatgagccctgaagagcgtaagaaagcaactccacgcacagtcatgattggaggaaaagcatttgcaacatatacaaatgcaaaaagaatagtgaagctggtgaatgatgtaggtgcggtggtcaatactgatcctgaggtcaatagctatttgaaggttgtgtttgttccaaattacaatgtatctgtggctgagctacttatcccaggaagtgagctgtcacaacatatcagcactgcaggcatggaggcaagtggcacaagcaacatgaagttctctttgaatggttgcctcataataggaacactggacggagctaatgttgaaatccgtgaggaaattggacaggaaaactttttcctttttggtgccacagctgatgaagtccctaagctccgcaaggatagagagaacggactgttcaaaccagatcctcggttcgaagaagcaaagaagtttattaggagtggagcatttggtagctacgactacaatccacttcttgactctctggaggggaacagcggttatggtcgtgctgattattttcttgtcggccatgacttcgcaggctatctagatgctcaagcaagagttgatgaagcttacaaggataggaggaagtggcttaagatgtccatattgagcactgcagggtccggcaagttcagcagcgaccggacaattgctcagtatgccaaggaaatctggaagatcgaggagtgccgtgtaccatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001101 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009414 GO:0009415 GO:0009507 GO:0009536 GO:0009628 GO:0009987 GO:0010035 GO:0010038 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048037 GO:0050662 GO:0050896 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

887

Amino Acids

101.16

Weight (kDa)

6.73

Isoelectric Point (pI)

35.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46970
fragaria_vesca	FvH4_3g37910 FvH4_3g37910 FvH4_3g37910 FvH4_3g37910 FvH4_3g37910
malus_domestica	MD03G1077800.v1.1 MD05G1167500.v1.1 MD11G1082200.v1.1
prunus_persica	Prupe.6G062600_v2.0.a1
pyrus_communis	pycom03g06170 pycom11g07050
rosa_chinensis	RchiOBHm_Chr5g0068321
rosa_laevigata	RLG00000035965
rosa_multiflora	Rmu_sc0001418.1_g000022
rosa_roxburghii	Rroxscaffold_1G00012440 Rroxscaffold_1G00013180
rosa_rugosa	Rorug05G0388800
rosa_samantha	Rh5AG447300 Rh5BG465400 Rh5CG487000 Rh5DG479000
rosa_wichuraiana	Rw5G041770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1703
Acc36I	ACCTGC	2 cut(s)	216, 955
AccB1I	GGYRCC	1 cut(s)	2294
AccII	CGCG	3 cut(s)	98, 634, 790
AccIII	TCCGGA	1 cut(s)	1183
AciI	CCGC	8 cut(s)	41, 159, 1109, 1615, 1855, 2042, 2323, 2451
AclI	AACGTT	1 cut(s)	303
AclWI	GGATC	5 cut(s)	178, 637, 793, 2051, 2351
AcoI	YGGCCR	4 cut(s)	54, 514, 1571, 2482
AcsI	RAATTY	7 cut(s)	100, 295, 445, 548, 692, 704, 1416
AcuI	CTGAAG	6 cut(s)	342, 1052, 1055, 1308, 1643, 1956
AcyI	GRCGYC	2 cut(s)	888, 1754
AdeI	CACNNNGTG	1 cut(s)	1428
AfaI	GTAC	4 cut(s)	206, 476, 1793, 2658
AfiI	CCNNNNNNNGG	2 cut(s)	458, 845
AflII	CTTAAG	1 cut(s)	2555
AjnI	CCWGG	5 cut(s)	399, 844, 997, 1692, 2131
Alw21I	GWGCWC	4 cut(s)	351, 973, 1644, 2576
Alw26I	GTCTC	2 cut(s)	194, 1567
AlwI	GGATC	5 cut(s)	178, 637, 793, 2051, 2351
Ama87I	CYCGRG	2 cut(s)	350, 966
Aor13HI	TCCGGA	1 cut(s)	1183
AoxI	GGCC	6 cut(s)	54, 340, 397, 514, 1571, 2482
ApeKI	GCWGC	4 cut(s)	38, 380, 950, 2598
ApoI	RAATTY	7 cut(s)	100, 295, 445, 548, 692, 704, 1416
AspS9I	GGNCC	4 cut(s)	340, 1122, 1696, 2583
AsuHPI	GGTGA	2 cut(s)	1648, 2038
AsuII	TTCGAA	2 cut(s)	1714, 2367
AvaI	CYCGRG	2 cut(s)	350, 966
AvaII	GGWCC	3 cut(s)	1122, 1696, 2583
AxyI	CCTNAGG	1 cut(s)	2061
BalI	TGGCCA	2 cut(s)	516, 1573
BanI	GGYRCC	1 cut(s)	2294
BanII	GRGCYC	4 cut(s)	351, 973, 1644, 1934
BarI	GAAGNNNNNNTAC	2 cut(s)	224, 256
BbsI	GAAGAC	2 cut(s)	866, 1703
Bbv12I	GWGCWC	4 cut(s)	351, 973, 1644, 2576
BbvCI	CCTCAGC	1 cut(s)	531
BbvI	GCAGC	4 cut(s)	50, 367, 937, 2610
BccI	CCATC	7 cut(s)	506, 620, 776, 926, 1462, 1582, 1759
BceAI	ACGGC	2 cut(s)	106, 2637
BciT130I	CCWGG	5 cut(s)	401, 846, 999, 1694, 2133
BciVI	GTATCC	1 cut(s)	842
BcoDI	GTCTC	2 cut(s)	194, 1567
BfaI	CTAG	3 cut(s)	425, 542, 2504
BfmI	CTRYAG	5 cut(s)	1008, 1054, 1630, 2163, 2577
BfrI	CTTAAG	1 cut(s)	2555
BfuAI	ACCTGC	2 cut(s)	216, 955
BfuI	GTATCC	1 cut(s)	842
BglI	GCCNNNNNGGC	1 cut(s)	1766
BglII	AGATCT	1 cut(s)	1402
BisI	GCNGC	5 cut(s)	39, 42, 381, 951, 2599
BlpI	GCTNAGC	2 cut(s)	954, 2118
BlsI	GCNGC	5 cut(s)	40, 43, 382, 952, 2600
Bme1390I	CCNGG	5 cut(s)	401, 846, 999, 1694, 2133
Bme18I	GGWCC	3 cut(s)	1122, 1696, 2583
BmeT110I	CYCGRG	2 cut(s)	350, 966
BmgT120I	GGNCC	4 cut(s)	340, 1122, 1696, 2583
BmiI	GGNNCC	3 cut(s)	63, 2296, 2584
BmrFI	CCNGG	5 cut(s)	401, 846, 999, 1694, 2133
BmsI	GCATC	7 cut(s)	367, 667, 905, 994, 1070, 1720, 2497
BoxI	GACNNNNGTC	1 cut(s)	1811
BpiI	GAAGAC	2 cut(s)	866, 1703
BpmI	CTGGAG	2 cut(s)	1020, 2459
Bpu10I	CCTNAGC	3 cut(s)	531, 1638, 2316
Bpu1102I	GCTNAGC	2 cut(s)	954, 2118
Bpu14I	TTCGAA	2 cut(s)	1714, 2367
BpuEI	CTTGAG	3 cut(s)	1316, 1427, 2496
BsaBI	GATNNNNATC	2 cut(s)	1164, 1443
BsaHI	GRCGYC	2 cut(s)	888, 1754
BsaWI	WCCGGW	2 cut(s)	1183, 2604
BsaXI	ACNNNNNCTCC	2 cut(s)	2232, 2262
Bsc4I	CCNNNNNNNGG	2 cut(s)	458, 845
Bse118I	RCCGGY	1 cut(s)	451
Bse1I	ACTGG	3 cut(s)	590, 746, 2238
Bse21I	CCTNAGG	1 cut(s)	2061
Bse8I	GATNNNNATC	2 cut(s)	1164, 1443
BseAI	TCCGGA	1 cut(s)	1183
BseBI	CCWGG	5 cut(s)	401, 846, 999, 1694, 2133
BseGI	GGATG	8 cut(s)	517, 1165, 1213, 1234, 1246, 1473, 1574, 1681
BseJI	GATNNNNATC	2 cut(s)	1164, 1443
BseLI	CCNNNNNNNGG	2 cut(s)	458, 845
BseMII	CTCAG	8 cut(s)	522, 968, 1506, 1629, 1657, 2052, 2109, 2630
BseNI	ACTGG	3 cut(s)	590, 746, 2238
BseRI	GAGGAG	2 cut(s)	1599, 2660
BseXI	GCAGC	4 cut(s)	50, 367, 937, 2610
BsgI	GTGCAG	1 cut(s)	366
Bsh1236I	CGCG	3 cut(s)	98, 634, 790
Bsh1285I	CGRYCG	1 cut(s)	2605
BshFI	GGCC	6 cut(s)	56, 342, 399, 516, 1573, 2484
BshNI	GGYRCC	1 cut(s)	2294
BsiEI	CGRYCG	1 cut(s)	2605
BsiHKAI	GWGCWC	4 cut(s)	351, 973, 1644, 2576
BsiHKCI	CYCGRG	2 cut(s)	350, 966
BsiSI	CCGG	6 cut(s)	35, 137, 452, 1184, 2586, 2605
BslFI	GGGAC	2 cut(s)	899, 2297
BslI	CCNNNNNNNGG	2 cut(s)	458, 845
BsmAI	GTCTC	2 cut(s)	194, 1567
BsmBI	CGTCTC	1 cut(s)	194
BsmFI	GGGAC	2 cut(s)	899, 2297
BsnI	GGCC	6 cut(s)	56, 342, 399, 516, 1573, 2484
BsoBI	CYCGRG	2 cut(s)	350, 966
Bsp119I	TTCGAA	2 cut(s)	1714, 2367
Bsp1286I	GDGCHC	5 cut(s)	351, 973, 1644, 1934, 2576
Bsp13I	TCCGGA	1 cut(s)	1183
Bsp143I	GATC	7 cut(s)	183, 629, 785, 1402, 2056, 2356, 2640
Bsp1720I	GCTNAGC	2 cut(s)	954, 2118
Bsp19I	CCATGG	2 cut(s)	252, 432
Bsp68I	TCGCGA	2 cut(s)	634, 790
BspACI	CCGC	8 cut(s)	41, 159, 1109, 1615, 1855, 2042, 2323, 2451
BspANI	GGCC	6 cut(s)	56, 342, 399, 516, 1573, 2484
BspCNI	CTCAG	8 cut(s)	523, 967, 1507, 1630, 1656, 2053, 2110, 2629
BspEI	TCCGGA	1 cut(s)	1183
BspFNI	CGCG	3 cut(s)	98, 634, 790
BspHI	TCATGA	2 cut(s)	1861, 1968
BspLI	GGNNCC	3 cut(s)	63, 2296, 2584
BspMAI	CTGCAG	4 cut(s)	1058, 1634, 2167, 2581
BspMI	ACCTGC	2 cut(s)	216, 955
BspPI	GGATC	5 cut(s)	178, 637, 793, 2051, 2351
BspQI	GCTCTTC	1 cut(s)	1932
BspT104I	TTCGAA	2 cut(s)	1714, 2367
BspT107I	GGYRCC	1 cut(s)	2294
BspTI	CTTAAG	1 cut(s)	2555
BsrFI	RCCGGY	1 cut(s)	451
BsrI	ACTGG	3 cut(s)	590, 746, 2238
BssAI	RCCGGY	1 cut(s)	451
BssMI	GATC	7 cut(s)	183, 629, 785, 1402, 2056, 2356, 2640
BssNI	GRCGYC	2 cut(s)	888, 1754
BssT1I	CCWWGG	6 cut(s)	252, 432, 557, 713, 1137, 2625
Bst2UI	CCWGG	5 cut(s)	401, 846, 999, 1694, 2133
Bst4CI	ACNGT	9 cut(s)	179, 1258, 1279, 1315, 1501, 1791, 1878, 1966, 2346
Bst6I	CTCTTC	1 cut(s)	1932
BstACI	GRCGYC	2 cut(s)	888, 1754
BstAFI	CTTAAG	1 cut(s)	2555
BstBI	TTCGAA	2 cut(s)	1714, 2367
BstC8I	GCNNGC	8 cut(s)	144, 411, 453, 663, 819, 1389, 2167, 2497
BstDEI	CTNAG	9 cut(s)	531, 954, 1515, 1638, 1643, 2061, 2118, 2316, 2616
BstDSI	CCRYGG	2 cut(s)	252, 432
BstF5I	GGATG	8 cut(s)	517, 1165, 1213, 1234, 1246, 1473, 1574, 1681
BstFNI	CGCG	3 cut(s)	98, 634, 790
BstKTI	GATC	7 cut(s)	186, 632, 788, 1405, 2059, 2359, 2643
BstMAI	GTCTC	2 cut(s)	194, 1567
BstMBI	GATC	7 cut(s)	183, 629, 785, 1402, 2056, 2356, 2640
BstMCI	CGRYCG	1 cut(s)	2605
BstMWI	GCNNNNNNNGC	9 cut(s)	152, 493, 513, 677, 1730, 1766, 2166, 2595, 2621
BstNI	CCWGG	5 cut(s)	401, 846, 999, 1694, 2133
BstNSI	RCATGY	1 cut(s)	1805
BstPAI	GACNNNNGTC	1 cut(s)	1811
BstSCI	CCNGG	5 cut(s)	399, 844, 997, 1692, 2131
BstSFI	CTRYAG	5 cut(s)	1008, 1054, 1630, 2163, 2577
BstUI	CGCG	3 cut(s)	98, 634, 790
BstV1I	GCAGC	4 cut(s)	50, 367, 937, 2610
BstV2I	GAAGAC	2 cut(s)	866, 1703
BstX2I	RGATCY	2 cut(s)	1402, 2356
BstYI	RGATCY	2 cut(s)	1402, 2356
Bsu36I	CCTNAGG	1 cut(s)	2061
BsuI	GTATCC	1 cut(s)	842
BsuRI	GGCC	6 cut(s)	56, 342, 399, 516, 1573, 2484
BtgI	CCRYGG	2 cut(s)	252, 432
BtgZI	GCGATG	1 cut(s)	1047
BtsCI	GGATG	8 cut(s)	517, 1165, 1213, 1234, 1246, 1473, 1574, 1681
BtsI	GCAGTG	3 cut(s)	1063, 2160, 2574
BtsIMutI	CAGTG	5 cut(s)	1063, 1651, 2160, 2231, 2574
BtuMI	TCGCGA	2 cut(s)	634, 790
BveI	ACCTGC	2 cut(s)	216, 955
Cac8I	GCNNGC	8 cut(s)	144, 411, 453, 663, 819, 1389, 2167, 2497
CciI	TCATGA	2 cut(s)	1861, 1968
Cfr10I	RCCGGY	1 cut(s)	451
Cfr13I	GGNCC	4 cut(s)	340, 1122, 1696, 2583
CseI	GACGC	5 cut(s)	66, 157, 896, 1420, 1743
Csp6I	GTAC	4 cut(s)	205, 475, 1792, 2657
CviQI	GTAC	4 cut(s)	205, 475, 1792, 2657
DdeI	CTNAG	9 cut(s)	531, 954, 1515, 1638, 1643, 2061, 2118, 2316, 2616
DpnI	GATC	7 cut(s)	185, 631, 787, 1404, 2058, 2358, 2642
DpnII	GATC	7 cut(s)	183, 629, 785, 1402, 2056, 2356, 2640
DraI	TTTAAA	1 cut(s)	1536
DraIII	CACNNNGTG	1 cut(s)	1428
DrdI	GACNNNNNNGTC	1 cut(s)	1703
DseDI	GACNNNNNNGTC	1 cut(s)	1703
EaeI	YGGCCR	4 cut(s)	54, 514, 1571, 2482
Eam1104I	CTCTTC	1 cut(s)	1932
EarI	CTCTTC	1 cut(s)	1932
EciI	GGCGGA	1 cut(s)	1124
Ecl136II	GAGCTC	3 cut(s)	349, 971, 1642
Eco130I	CCWWGG	6 cut(s)	252, 432, 557, 713, 1137, 2625
Eco24I	GRGCYC	4 cut(s)	351, 973, 1644, 1934
Eco47I	GGWCC	3 cut(s)	1122, 1696, 2583
Eco53kI	GAGCTC	3 cut(s)	349, 971, 1642
Eco57I	CTGAAG	6 cut(s)	342, 1052, 1055, 1308, 1643, 1956
Eco81I	CCTNAGG	1 cut(s)	2061
Eco88I	CYCGRG	2 cut(s)	350, 966
EcoICRI	GAGCTC	3 cut(s)	349, 971, 1642
EcoRII	CCWGG	5 cut(s)	399, 844, 997, 1692, 2131
EcoT14I	CCWWGG	6 cut(s)	252, 432, 557, 713, 1137, 2625
EcoT38I	GRGCYC	4 cut(s)	351, 973, 1644, 1934
ErhI	CCWWGG	6 cut(s)	252, 432, 557, 713, 1137, 2625
Esp3I	CGTCTC	1 cut(s)	194
FalI	AAGNNNNNCTT	4 cut(s)	397, 429, 1008, 1040
FaqI	GGGAC	2 cut(s)	899, 2297
FauNDI	CATATG	1 cut(s)	1341
Fnu4HI	GCNGC	5 cut(s)	39, 42, 381, 951, 2599
FokI	GGATG	8 cut(s)	524, 1152, 1220, 1241, 1253, 1480, 1561, 1688
FriOI	GRGCYC	4 cut(s)	351, 973, 1644, 1934
Fsp4HI	GCNGC	5 cut(s)	39, 42, 381, 951, 2599
FspBI	CTAG	3 cut(s)	425, 542, 2504
GluI	GCNGC	5 cut(s)	39, 42, 381, 951, 2599
GsuI	CTGGAG	2 cut(s)	1020, 2459
HaeIII	GGCC	6 cut(s)	56, 342, 399, 516, 1573, 2484
HapII	CCGG	6 cut(s)	35, 137, 452, 1184, 2586, 2605
HgaI	GACGC	5 cut(s)	66, 157, 896, 1420, 1743
Hin1I	GRCGYC	2 cut(s)	888, 1754
HindIII	AAGCTT	3 cut(s)	324, 1325, 2529
HinfI	GANTC	7 cut(s)	31, 46, 226, 428, 1086, 1858, 2432
HpaII	CCGG	6 cut(s)	35, 137, 452, 1184, 2586, 2605
HphI	GGTGA	2 cut(s)	1648, 2038
Hpy166II	GTNNAC	1 cut(s)	2657
Hpy188I	TCNGA	8 cut(s)	183, 188, 231, 309, 904, 1035, 1085, 1126
Hpy8I	GTNNAC	1 cut(s)	2657
HpyAV	CCTTC	5 cut(s)	399, 1010, 1208, 1292, 2074
HpyCH4III	ACNGT	9 cut(s)	179, 1258, 1279, 1315, 1501, 1791, 1878, 1966, 2346
HpyCH4IV	ACGT	3 cut(s)	203, 303, 1030
HpyF10VI	GCNNNNNNNGC	9 cut(s)	152, 493, 513, 677, 1730, 1766, 2166, 2595, 2621
HpyF3I	CTNAG	9 cut(s)	531, 954, 1515, 1638, 1643, 2061, 2118, 2316, 2616
HpySE526I	ACGT	3 cut(s)	203, 303, 1030
Hsp92I	GRCGYC	2 cut(s)	888, 1754
Kpn2I	TCCGGA	1 cut(s)	1183
KroI	GCCGGC	1 cut(s)	451
KroNI	GCCGGC	1 cut(s)	453
Kzo9I	GATC	7 cut(s)	183, 629, 785, 1402, 2056, 2356, 2640
LguI	GCTCTTC	1 cut(s)	1932
LmnI	GCTCC	5 cut(s)	139, 1186, 2240, 2325, 2396
Lsp1109I	GCAGC	4 cut(s)	50, 367, 937, 2610
LweI	GCATC	7 cut(s)	367, 667, 905, 994, 1070, 1720, 2497
MaeI	CTAG	3 cut(s)	425, 542, 2504
MaeII	ACGT	3 cut(s)	203, 303, 1030
MaeIII	GTNAC	6 cut(s)	173, 1243, 1305, 1526, 1804, 2145
MalI	GATC	7 cut(s)	185, 631, 787, 1404, 2058, 2358, 2642
MboI	GATC	7 cut(s)	183, 629, 785, 1402, 2056, 2356, 2640
MfeI	CAATTG	1 cut(s)	2610
MflI	RGATCY	2 cut(s)	1402, 2356
MhlI	GDGCHC	5 cut(s)	351, 973, 1644, 1934, 2576
MlsI	TGGCCA	2 cut(s)	516, 1573
MluNI	TGGCCA	2 cut(s)	516, 1573
MlyI	GAGTC	2 cut(s)	422, 2426
MmeI	TCCRAC	2 cut(s)	105, 1157
Mox20I	TGGCCA	2 cut(s)	516, 1573
MroI	TCCGGA	1 cut(s)	1183
MroNI	GCCGGC	1 cut(s)	451
MscI	TGGCCA	2 cut(s)	516, 1573
MslI	CAYNNNNRTG	4 cut(s)	768, 1379, 1847, 1967
Msp20I	TGGCCA	2 cut(s)	516, 1573
MspA1I	CMGCKG	3 cut(s)	41, 2303, 2451
MspCI	CTTAAG	1 cut(s)	2555
MspI	CCGG	6 cut(s)	35, 137, 452, 1184, 2586, 2605
MspR9I	CCNGG	5 cut(s)	401, 846, 999, 1694, 2133
MunI	CAATTG	1 cut(s)	2610
MvaI	CCWGG	5 cut(s)	401, 846, 999, 1694, 2133
MvnI	CGCG	3 cut(s)	98, 634, 790
MwoI	GCNNNNNNNGC	9 cut(s)	152, 493, 513, 677, 1730, 1766, 2166, 2595, 2621
NaeI	GCCGGC	1 cut(s)	453
NcoI	CCATGG	2 cut(s)	252, 432
NdeI	CATATG	1 cut(s)	1341
NdeII	GATC	7 cut(s)	183, 629, 785, 1402, 2056, 2356, 2640
NgoMIV	GCCGGC	1 cut(s)	451
NlaIV	GGNNCC	3 cut(s)	63, 2296, 2584
NmeAIII	GCCGAG	3 cut(s)	82, 187, 1591
NmuCI	GTSAC	6 cut(s)	173, 1243, 1305, 1526, 1804, 2145
NruI	TCGCGA	2 cut(s)	634, 790
NspI	RCATGY	1 cut(s)	1805
NspV	TTCGAA	2 cut(s)	1714, 2367
PaeR7I	CTCGAG	2 cut(s)	350, 966
PagI	TCATGA	2 cut(s)	1861, 1968
PciSI	GCTCTTC	1 cut(s)	1932
PcsI	WCGNNNNNNNCGW	1 cut(s)	159
PdiI	GCCGGC	1 cut(s)	453
PfeI	GAWTC	5 cut(s)	31, 46, 226, 1086, 1858
PflFI	GACNNNGTC	1 cut(s)	1559
PfoI	TCCNGGA	2 cut(s)	844, 997
PkrI	GCNGC	5 cut(s)	40, 43, 382, 952, 2600
PleI	GAGTC	2 cut(s)	422, 2426
PpsI	GAGTC	2 cut(s)	422, 2426
PshAI	GACNNNNGTC	1 cut(s)	1811
Psp124BI	GAGCTC	3 cut(s)	351, 973, 1644
Psp1406I	AACGTT	1 cut(s)	303
Psp6I	CCWGG	5 cut(s)	399, 844, 997, 1692, 2131
PspGI	CCWGG	5 cut(s)	399, 844, 997, 1692, 2131
PspN4I	GGNNCC	3 cut(s)	63, 2296, 2584
PspPI	GGNCC	4 cut(s)	340, 1122, 1696, 2583
PsrI	GAACNNNNNNTAC	2 cut(s)	188, 220
PstI	CTGCAG	4 cut(s)	1058, 1634, 2167, 2581
PsuI	RGATCY	2 cut(s)	1402, 2356
PsyI	GACNNNGTC	1 cut(s)	1559
PvuII	CAGCTG	1 cut(s)	2303
RruI	TCGCGA	2 cut(s)	634, 790
RsaI	GTAC	4 cut(s)	206, 476, 1793, 2658
RsaNI	GTAC	4 cut(s)	205, 475, 1792, 2657
RseI	CAYNNNNRTG	4 cut(s)	768, 1379, 1847, 1967
SacI	GAGCTC	3 cut(s)	351, 973, 1644
SapI	GCTCTTC	1 cut(s)	1932
SatI	GCNGC	5 cut(s)	39, 42, 381, 951, 2599
Sau3AI	GATC	7 cut(s)	183, 629, 785, 1402, 2056, 2356, 2640
Sau96I	GGNCC	4 cut(s)	340, 1122, 1696, 2583
SchI	GAGTC	2 cut(s)	422, 2426
ScrFI	CCNGG	5 cut(s)	401, 846, 999, 1694, 2133
SduI	GDGCHC	5 cut(s)	351, 973, 1644, 1934, 2576
SfaNI	GCATC	7 cut(s)	367, 667, 905, 994, 1070, 1720, 2497
SfcI	CTRYAG	5 cut(s)	1008, 1054, 1630, 2163, 2577
Sfr274I	CTCGAG	2 cut(s)	350, 966
SfuI	TTCGAA	2 cut(s)	1714, 2367
SinI	GGWCC	3 cut(s)	1122, 1696, 2583
SlaI	CTCGAG	2 cut(s)	350, 966
SmiMI	CAYNNNNRTG	4 cut(s)	768, 1379, 1847, 1967
SmlI	CTYRAG	6 cut(s)	350, 966, 1295, 1406, 2511, 2555
SmoI	CTYRAG	6 cut(s)	350, 966, 1295, 1406, 2511, 2555
SsiI	CCGC	8 cut(s)	41, 159, 1109, 1615, 1855, 2042, 2323, 2451
SspI	AATATT	1 cut(s)	1888
SspMI	CTAG	3 cut(s)	425, 542, 2504
SstI	GAGCTC	3 cut(s)	351, 973, 1644
StyD4I	CCNGG	5 cut(s)	399, 844, 997, 1692, 2131
StyI	CCWWGG	6 cut(s)	252, 432, 557, 713, 1137, 2625
TaaI	ACNGT	9 cut(s)	179, 1258, 1279, 1315, 1501, 1791, 1878, 1966, 2346
TaiI	ACGT	3 cut(s)	206, 306, 1033
TaqI	TCGA	7 cut(s)	26, 132, 351, 967, 1714, 2367, 2643
TaqII	GACCGA	1 cut(s)	1697
TatI	WGTACW	1 cut(s)	1791
TauI	GCSGC	1 cut(s)	44
TfiI	GAWTC	5 cut(s)	31, 46, 226, 1086, 1858
TscAI	CASTG	5 cut(s)	1063, 1651, 2167, 2238, 2581
TseFI	GTSAC	6 cut(s)	173, 1243, 1305, 1526, 1804, 2145
TseI	GCWGC	4 cut(s)	38, 380, 950, 2598
Tsp45I	GTSAC	6 cut(s)	173, 1243, 1305, 1526, 1804, 2145
TspGWI	ACGGA	7 cut(s)	161, 514, 1411, 1688, 2246, 2253, 2355
TspRI	CASTG	5 cut(s)	1063, 1651, 2167, 2238, 2581
Tth111I	GACNNNGTC	1 cut(s)	1559
Vha464I	CTTAAG	1 cut(s)	2555
VpaK11BI	GGWCC	3 cut(s)	1122, 1696, 2583
XapI	RAATTY	7 cut(s)	100, 295, 445, 548, 692, 704, 1416
XbaI	TCTAGA	2 cut(s)	424, 2503
XceI	RCATGY	1 cut(s)	1805
XhoI	CTCGAG	2 cut(s)	350, 966
XspI	CTAG	3 cut(s)	425, 542, 2504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.