No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G29180 |
| fragaria_vesca | FvH4_3g36880 |
| malus_domestica | MD03G1086900.v1.1 MD11G1096000.v1.1 |
| prunus_persica | Prupe.6G071500_v2.0.a1 |
| pyrus_communis | pycom03g06880 pycom11g08130 |
| rosa_chinensis | RchiOBHm_Chr5g0066101 |
| rosa_laevigata | RLG00000035842 |
| rosa_multiflora | Rmu_sc0002406.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00014910 |
| rosa_rugosa | Rorug05G0376300 |
| rosa_samantha | Rh5AG434800 Rh5BG451100 Rh5CG473400 Rh5DG464700 |
| rosa_wichuraiana | Rw5G040720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 264 |
| AciI | CCGC | 2 cut(s) | 189, 213 |
| AcoI | YGGCCR | 1 cut(s) | 493 |
| AluBI | AGCT | 2 cut(s) | 412, 476 |
| AluI | AGCT | 2 cut(s) | 412, 476 |
| Alw26I | GTCTC | 3 cut(s) | 251, 344, 399 |
| AoxI | GGCC | 3 cut(s) | 276, 478, 493 |
| AspA2I | CCTAGG | 1 cut(s) | 370 |
| AspLEI | GCGC | 2 cut(s) | 209, 265 |
| AspS9I | GGNCC | 2 cut(s) | 141, 479 |
| AsuHPI | GGTGA | 5 cut(s) | 30, 148, 166, 373, 475 |
| AvaII | GGWCC | 1 cut(s) | 141 |
| AvrII | CCTAGG | 1 cut(s) | 370 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 36 |
| BccI | CCATC | 4 cut(s) | 43, 60, 109, 353 |
| BcoDI | GTCTC | 3 cut(s) | 251, 344, 399 |
| BfaI | CTAG | 2 cut(s) | 282, 371 |
| BfmI | CTRYAG | 2 cut(s) | 234, 389 |
| BfoI | RGCGCY | 1 cut(s) | 210 |
| BlnI | CCTAGG | 1 cut(s) | 370 |
| Bme18I | GGWCC | 1 cut(s) | 141 |
| BmgT120I | GGNCC | 2 cut(s) | 141, 479 |
| BpuEI | CTTGAG | 3 cut(s) | 44, 275, 434 |
| BsaI | GGTCTC | 1 cut(s) | 344 |
| BsaJI | CCNNGG | 1 cut(s) | 370 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 285, 315 |
| BseDI | CCNNGG | 1 cut(s) | 370 |
| BseGI | GGATG | 4 cut(s) | 14, 101, 345, 517 |
| BseMII | CTCAG | 1 cut(s) | 97 |
| BshFI | GGCC | 3 cut(s) | 278, 480, 495 |
| BsmAI | GTCTC | 3 cut(s) | 251, 344, 399 |
| BsnI | GGCC | 3 cut(s) | 278, 480, 495 |
| Bso31I | GGTCTC | 1 cut(s) | 344 |
| BspACI | CCGC | 2 cut(s) | 189, 213 |
| BspANI | GGCC | 3 cut(s) | 278, 480, 495 |
| BspCNI | CTCAG | 1 cut(s) | 96 |
| BspMAI | CTGCAG | 2 cut(s) | 238, 393 |
| BspTNI | GGTCTC | 1 cut(s) | 344 |
| BssECI | CCNNGG | 1 cut(s) | 370 |
| BssT1I | CCWWGG | 1 cut(s) | 370 |
| Bst6I | CTCTTC | 3 cut(s) | 389, 437, 452 |
| BstC8I | GCNNGC | 2 cut(s) | 234, 478 |
| BstDEI | CTNAG | 1 cut(s) | 83 |
| BstF5I | GGATG | 4 cut(s) | 14, 101, 345, 517 |
| BstH2I | RGCGCY | 1 cut(s) | 210 |
| BstHHI | GCGC | 2 cut(s) | 209, 265 |
| BstMAI | GTCTC | 3 cut(s) | 251, 344, 399 |
| BstSFI | CTRYAG | 2 cut(s) | 234, 389 |
| BsuRI | GGCC | 3 cut(s) | 278, 480, 495 |
| BtsCI | GGATG | 4 cut(s) | 14, 101, 345, 517 |
| Cac8I | GCNNGC | 2 cut(s) | 234, 478 |
| CfoI | GCGC | 2 cut(s) | 209, 265 |
| Cfr13I | GGNCC | 2 cut(s) | 141, 479 |
| CviJI | RGCY | 9 cut(s) | 5, 64, 69, 242, 278, 412, 476, 480, 495 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 64, 69, 242, 278, 412, 476, 480, 495 |
| DdeI | CTNAG | 1 cut(s) | 83 |
| EaeI | YGGCCR | 1 cut(s) | 493 |
| Eam1104I | CTCTTC | 3 cut(s) | 389, 437, 452 |
| EarI | CTCTTC | 3 cut(s) | 389, 437, 452 |
| Eco130I | CCWWGG | 1 cut(s) | 370 |
| Eco31I | GGTCTC | 1 cut(s) | 344 |
| Eco47I | GGWCC | 1 cut(s) | 141 |
| EcoT14I | CCWWGG | 1 cut(s) | 370 |
| ErhI | CCWWGG | 1 cut(s) | 370 |
| FaiI | YATR | 2 cut(s) | 367, 509 |
| FokI | GGATG | 3 cut(s) | 88, 332, 524 |
| FspBI | CTAG | 2 cut(s) | 282, 371 |
| FspI | TGCGCA | 1 cut(s) | 264 |
| GlaI | GCGC | 2 cut(s) | 208, 264 |
| HaeII | RGCGCY | 1 cut(s) | 210 |
| HaeIII | GGCC | 3 cut(s) | 278, 480, 495 |
| HhaI | GCGC | 2 cut(s) | 209, 265 |
| Hin6I | GCGC | 2 cut(s) | 207, 263 |
| HinP1I | GCGC | 2 cut(s) | 207, 263 |
| HindIII | AAGCTT | 1 cut(s) | 410 |
| HinfI | GANTC | 2 cut(s) | 224, 489 |
| HphI | GGTGA | 5 cut(s) | 30, 148, 166, 373, 475 |
| Hpy188I | TCNGA | 1 cut(s) | 86 |
| Hpy99I | CGWCG | 1 cut(s) | 329 |
| HpyAV | CCTTC | 2 cut(s) | 115, 284 |
| HpyCH4V | TGCA | 2 cut(s) | 236, 391 |
| HpyF3I | CTNAG | 1 cut(s) | 83 |
| HspAI | GCGC | 2 cut(s) | 207, 263 |
| LpnPI | CCDG | 5 cut(s) | 107, 191, 246, 251, 462 |
| MaeI | CTAG | 2 cut(s) | 282, 371 |
| MaeIII | GTNAC | 2 cut(s) | 284, 376 |
| MluCI | AATT | 1 cut(s) | 77 |
| MnlI | CCTC | 8 cut(s) | 92, 127, 226, 253, 289, 359, 418, 453 |
| MseI | TTAA | 1 cut(s) | 146 |
| NmuCI | GTSAC | 2 cut(s) | 284, 376 |
| NsbI | TGCGCA | 1 cut(s) | 264 |
| PfeI | GAWTC | 2 cut(s) | 224, 489 |
| PspPI | GGNCC | 2 cut(s) | 141, 479 |
| PstI | CTGCAG | 2 cut(s) | 238, 393 |
| SaqAI | TTAA | 1 cut(s) | 146 |
| Sau96I | GGNCC | 2 cut(s) | 141, 479 |
| SetI | ASST | 5 cut(s) | 146, 372, 376, 414, 478 |
| SfcI | CTRYAG | 2 cut(s) | 234, 389 |
| SinI | GGWCC | 1 cut(s) | 141 |
| SmlI | CTYRAG | 3 cut(s) | 59, 254, 413 |
| SmoI | CTYRAG | 3 cut(s) | 59, 254, 413 |
| Sse9I | AATT | 1 cut(s) | 77 |
| SsiI | CCGC | 2 cut(s) | 189, 213 |
| SspMI | CTAG | 2 cut(s) | 282, 371 |
| StyI | CCWWGG | 1 cut(s) | 370 |
| TasI | AATT | 1 cut(s) | 77 |
| TfiI | GAWTC | 2 cut(s) | 224, 489 |
| Tru1I | TTAA | 1 cut(s) | 146 |
| Tru9I | TTAA | 1 cut(s) | 146 |
| TseFI | GTSAC | 2 cut(s) | 284, 376 |
| Tsp45I | GTSAC | 2 cut(s) | 284, 376 |
| TspDTI | ATGAA | 2 cut(s) | 142, 528 |
| TspGWI | ACGGA | 4 cut(s) | 7, 154, 217, 235 |
| VpaK11BI | GGWCC | 1 cut(s) | 141 |
| XmaJI | CCTAGG | 1 cut(s) | 370 |
| XspI | CTAG | 2 cut(s) | 282, 371 |