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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G29180 |
| fragaria_vesca | FvH4_3g36880 |
| malus_domestica | MD03G1086900.v1.1 MD11G1096000.v1.1 |
| prunus_persica | Prupe.6G071500_v2.0.a1 |
| pyrus_communis | pycom03g06880 pycom11g08130 |
| rosa_chinensis | RchiOBHm_Chr5g0066101 |
| rosa_laevigata | RLG00000035842 |
| rosa_multiflora | Rmu_sc0002406.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00014910 |
| rosa_rugosa | Rorug05G0376300 |
| rosa_samantha | Rh5AG434800 Rh5BG451100 Rh5CG473400 Rh5DG464700 |
| rosa_wichuraiana | Rw5G040720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 258 |
| AcoI | YGGCCR | 1 cut(s) | 270 |
| AcsI | RAATTY | 2 cut(s) | 97, 512 |
| AcuI | CTGAAG | 1 cut(s) | 216 |
| AfaI | GTAC | 1 cut(s) | 365 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 195 |
| AgsI | TTSAA | 4 cut(s) | 132, 221, 503, 512 |
| AhlI | ACTAGT | 1 cut(s) | 278 |
| AluBI | AGCT | 3 cut(s) | 409, 428, 473 |
| AluI | AGCT | 3 cut(s) | 409, 428, 473 |
| Alw26I | GTCTC | 4 cut(s) | 245, 298, 341, 451 |
| AoxI | GGCC | 2 cut(s) | 270, 476 |
| ApoI | RAATTY | 2 cut(s) | 97, 512 |
| AspA2I | CCTAGG | 1 cut(s) | 367 |
| AspLEI | GCGC | 1 cut(s) | 259 |
| AspS9I | GGNCC | 1 cut(s) | 476 |
| AsuHPI | GGTGA | 2 cut(s) | 292, 331 |
| AvrII | CCTAGG | 1 cut(s) | 367 |
| AxyI | CCTNAGG | 1 cut(s) | 480 |
| BalI | TGGCCA | 1 cut(s) | 272 |
| BccI | CCATC | 2 cut(s) | 43, 281 |
| BcoDI | GTCTC | 4 cut(s) | 245, 298, 341, 451 |
| BcuI | ACTAGT | 1 cut(s) | 278 |
| BfaI | CTAG | 2 cut(s) | 279, 368 |
| BlnI | CCTAGG | 1 cut(s) | 367 |
| BmgT120I | GGNCC | 1 cut(s) | 476 |
| BmsI | GCATC | 1 cut(s) | 508 |
| BpuEI | CTTGAG | 1 cut(s) | 431 |
| BsaI | GGTCTC | 1 cut(s) | 341 |
| BsaJI | CCNNGG | 1 cut(s) | 367 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 195 |
| Bse21I | CCTNAGG | 1 cut(s) | 480 |
| Bse3DI | GCAATG | 1 cut(s) | 67 |
| BseDI | CCNNGG | 1 cut(s) | 367 |
| BseGI | GGATG | 1 cut(s) | 17 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 195 |
| BseMI | GCAATG | 1 cut(s) | 67 |
| BseMII | CTCAG | 2 cut(s) | 94, 228 |
| BseRI | GAGGAG | 1 cut(s) | 469 |
| BseYI | CCCAGC | 1 cut(s) | 473 |
| BshFI | GGCC | 2 cut(s) | 272, 478 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 195 |
| BsmAI | GTCTC | 4 cut(s) | 245, 298, 341, 451 |
| BsnI | GGCC | 2 cut(s) | 272, 478 |
| Bso31I | GGTCTC | 1 cut(s) | 341 |
| BspANI | GGCC | 2 cut(s) | 272, 478 |
| BspCNI | CTCAG | 2 cut(s) | 93, 227 |
| BspTNI | GGTCTC | 1 cut(s) | 341 |
| BsrDI | GCAATG | 1 cut(s) | 67 |
| BssECI | CCNNGG | 1 cut(s) | 367 |
| BssT1I | CCWWGG | 1 cut(s) | 367 |
| Bst6I | CTCTTC | 4 cut(s) | 386, 414, 446, 498 |
| BstDEI | CTNAG | 4 cut(s) | 80, 214, 461, 480 |
| BstF5I | GGATG | 1 cut(s) | 17 |
| BstHHI | GCGC | 1 cut(s) | 259 |
| BstMAI | GTCTC | 4 cut(s) | 245, 298, 341, 451 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 236 |
| Bsu36I | CCTNAGG | 1 cut(s) | 480 |
| BsuRI | GGCC | 2 cut(s) | 272, 478 |
| BtsCI | GGATG | 1 cut(s) | 17 |
| CfoI | GCGC | 1 cut(s) | 259 |
| Cfr13I | GGNCC | 1 cut(s) | 476 |
| Csp6I | GTAC | 1 cut(s) | 364 |
| CviAII | CATG | 1 cut(s) | 164 |
| CviJI | RGCY | 7 cut(s) | 11, 230, 272, 409, 428, 473, 478 |
| CviKI_1 | RGCY | 7 cut(s) | 11, 230, 272, 409, 428, 473, 478 |
| CviQI | GTAC | 1 cut(s) | 364 |
| DdeI | CTNAG | 4 cut(s) | 80, 214, 461, 480 |
| EaeI | YGGCCR | 1 cut(s) | 270 |
| Eam1104I | CTCTTC | 4 cut(s) | 386, 414, 446, 498 |
| EarI | CTCTTC | 4 cut(s) | 386, 414, 446, 498 |
| Eco130I | CCWWGG | 1 cut(s) | 367 |
| Eco31I | GGTCTC | 1 cut(s) | 341 |
| Eco57I | CTGAAG | 1 cut(s) | 216 |
| Eco81I | CCTNAGG | 1 cut(s) | 480 |
| EcoT14I | CCWWGG | 1 cut(s) | 367 |
| ErhI | CCWWGG | 1 cut(s) | 367 |
| FaeI | CATG | 1 cut(s) | 167 |
| FaiI | YATR | 3 cut(s) | 23, 165, 207 |
| FatI | CATG | 1 cut(s) | 163 |
| FokI | GGATG | 1 cut(s) | 4 |
| FspBI | CTAG | 2 cut(s) | 279, 368 |
| FspI | TGCGCA | 1 cut(s) | 258 |
| GlaI | GCGC | 1 cut(s) | 258 |
| GsaI | CCCAGC | 1 cut(s) | 477 |
| HaeIII | GGCC | 2 cut(s) | 272, 478 |
| HhaI | GCGC | 1 cut(s) | 259 |
| Hin1II | CATG | 1 cut(s) | 167 |
| Hin6I | GCGC | 1 cut(s) | 257 |
| HinP1I | GCGC | 1 cut(s) | 257 |
| HindIII | AAGCTT | 1 cut(s) | 407 |
| HinfI | GANTC | 1 cut(s) | 221 |
| HphI | GGTGA | 2 cut(s) | 292, 331 |
| Hpy166II | GTNNAC | 1 cut(s) | 364 |
| Hpy188I | TCNGA | 2 cut(s) | 83, 235 |
| Hpy8I | GTNNAC | 1 cut(s) | 364 |
| HpyAV | CCTTC | 1 cut(s) | 433 |
| HpyCH4V | TGCA | 4 cut(s) | 209, 326, 388, 521 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 236 |
| HpyF3I | CTNAG | 4 cut(s) | 80, 214, 461, 480 |
| Hsp92II | CATG | 1 cut(s) | 167 |
| HspAI | GCGC | 1 cut(s) | 257 |
| LpnPI | CCDG | 3 cut(s) | 101, 245, 459 |
| LweI | GCATC | 1 cut(s) | 508 |
| MaeI | CTAG | 2 cut(s) | 279, 368 |
| MaeIII | GTNAC | 2 cut(s) | 298, 373 |
| MboII | GAAGA | 6 cut(s) | 305, 403, 431, 448, 463, 515 |
| MfeI | CAATTG | 1 cut(s) | 246 |
| MlsI | TGGCCA | 1 cut(s) | 272 |
| MluCI | AATT | 7 cut(s) | 51, 74, 97, 124, 192, 246, 512 |
| MluNI | TGGCCA | 1 cut(s) | 272 |
| MnlI | CCTC | 7 cut(s) | 124, 154, 223, 387, 393, 415, 447 |
| Mox20I | TGGCCA | 1 cut(s) | 272 |
| MscI | TGGCCA | 1 cut(s) | 272 |
| MseI | TTAA | 1 cut(s) | 529 |
| Msp20I | TGGCCA | 1 cut(s) | 272 |
| MunI | CAATTG | 1 cut(s) | 246 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 236 |
| NlaIII | CATG | 1 cut(s) | 167 |
| NmuCI | GTSAC | 2 cut(s) | 298, 373 |
| NsbI | TGCGCA | 1 cut(s) | 258 |
| PfeI | GAWTC | 1 cut(s) | 221 |
| PspFI | CCCAGC | 1 cut(s) | 473 |
| PspPI | GGNCC | 1 cut(s) | 476 |
| RsaI | GTAC | 1 cut(s) | 365 |
| RsaNI | GTAC | 1 cut(s) | 364 |
| SaqAI | TTAA | 1 cut(s) | 529 |
| Sau96I | GGNCC | 1 cut(s) | 476 |
| SetI | ASST | 9 cut(s) | 146, 206, 215, 369, 373, 411, 430, 475, 501 |
| SfaNI | GCATC | 1 cut(s) | 508 |
| SmlI | CTYRAG | 1 cut(s) | 410 |
| SmoI | CTYRAG | 1 cut(s) | 410 |
| SpeI | ACTAGT | 1 cut(s) | 278 |
| Sse9I | AATT | 7 cut(s) | 51, 74, 97, 124, 192, 246, 512 |
| SspMI | CTAG | 2 cut(s) | 279, 368 |
| StyI | CCWWGG | 1 cut(s) | 367 |
| TasI | AATT | 7 cut(s) | 51, 74, 97, 124, 192, 246, 512 |
| TfiI | GAWTC | 1 cut(s) | 221 |
| Tru1I | TTAA | 1 cut(s) | 529 |
| Tru9I | TTAA | 1 cut(s) | 529 |
| TseFI | GTSAC | 2 cut(s) | 298, 373 |
| Tsp45I | GTSAC | 2 cut(s) | 298, 373 |
| XapI | RAATTY | 2 cut(s) | 97, 512 |
| XmaJI | CCTAGG | 1 cut(s) | 367 |
| XspI | CTAG | 2 cut(s) | 279, 368 |