Ubiquitin domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16960 AT1G53400 AT5G45740 |
| fragaria_vesca | FvH4_3g18130 |
| malus_domestica | MD11G1265800.v1.1 |
| prunus_persica | Prupe.4G160100_v2.0.a1 |
| pyrus_communis | pycom03g19390 pycom11g23370 |
| rosa_chinensis | RchiOBHm_Chr5g0030541 |
| rosa_laevigata | RLG00000033224 |
| rosa_multiflora | Rmu_sc0013101.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00049770 |
| rosa_rugosa | Rorug05G0118300 |
| rosa_samantha | Rh5BG209700 Rh5CG233100 Rh5DG214200 |
| rosa_wichuraiana | Rw5G019240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 22 |
| AcuI | CTGAAG | 1 cut(s) | 210 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 146 |
| AgsI | TTSAA | 3 cut(s) | 46, 245, 335 |
| AluBI | AGCT | 3 cut(s) | 103, 182, 342 |
| AluI | AGCT | 3 cut(s) | 103, 182, 342 |
| Alw26I | GTCTC | 2 cut(s) | 27, 102 |
| AlwI | GGATC | 1 cut(s) | 22 |
| ApeKI | GCWGC | 1 cut(s) | 182 |
| AsuHPI | GGTGA | 1 cut(s) | 247 |
| BbvCI | CCTCAGC | 1 cut(s) | 81 |
| BbvI | GCAGC | 1 cut(s) | 169 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 263, 297 |
| BcoDI | GTCTC | 2 cut(s) | 27, 102 |
| BisI | GCNGC | 1 cut(s) | 183 |
| BlsI | GCNGC | 1 cut(s) | 184 |
| BmsI | GCATC | 2 cut(s) | 85, 160 |
| Bpu10I | CCTNAGC | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 1 cut(s) | 68 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 146 |
| BseDI | CCNNGG | 1 cut(s) | 68 |
| BseGI | GGATG | 2 cut(s) | 76, 175 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 146 |
| BseMII | CTCAG | 2 cut(s) | 95, 113 |
| BseRI | GAGGAG | 1 cut(s) | 129 |
| BseXI | GCAGC | 1 cut(s) | 169 |
| BseYI | CCCAGC | 1 cut(s) | 230 |
| BslFI | GGGAC | 2 cut(s) | 52, 143 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 146 |
| BsmAI | GTCTC | 2 cut(s) | 27, 102 |
| BsmBI | CGTCTC | 1 cut(s) | 27 |
| BsmFI | GGGAC | 2 cut(s) | 52, 143 |
| Bsp143I | GATC | 1 cut(s) | 14 |
| BspCNI | CTCAG | 2 cut(s) | 94, 112 |
| BspPI | GGATC | 1 cut(s) | 22 |
| BssECI | CCNNGG | 1 cut(s) | 68 |
| BssMI | GATC | 1 cut(s) | 14 |
| BssT1I | CCWWGG | 1 cut(s) | 68 |
| Bst4CI | ACNGT | 1 cut(s) | 227 |
| Bst6I | CTCTTC | 1 cut(s) | 114 |
| BstDEI | CTNAG | 2 cut(s) | 81, 99 |
| BstF5I | GGATG | 2 cut(s) | 76, 175 |
| BstKTI | GATC | 1 cut(s) | 17 |
| BstMAI | GTCTC | 2 cut(s) | 27, 102 |
| BstMBI | GATC | 1 cut(s) | 14 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 82, 179, 191 |
| BstV1I | GCAGC | 1 cut(s) | 169 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 69 |
| BtsCI | GGATG | 2 cut(s) | 76, 175 |
| BtsI | GCAGTG | 1 cut(s) | 132 |
| BtsIMutI | CAGTG | 2 cut(s) | 132, 232 |
| CviJI | RGCY | 6 cut(s) | 61, 85, 103, 182, 204, 342 |
| CviKI_1 | RGCY | 6 cut(s) | 61, 85, 103, 182, 204, 342 |
| DdeI | CTNAG | 2 cut(s) | 81, 99 |
| DpnI | GATC | 1 cut(s) | 16 |
| DpnII | GATC | 1 cut(s) | 14 |
| Eam1104I | CTCTTC | 1 cut(s) | 114 |
| EarI | CTCTTC | 1 cut(s) | 114 |
| Eco130I | CCWWGG | 1 cut(s) | 68 |
| Eco57I | CTGAAG | 1 cut(s) | 210 |
| EcoT14I | CCWWGG | 1 cut(s) | 68 |
| ErhI | CCWWGG | 1 cut(s) | 68 |
| Esp3I | CGTCTC | 1 cut(s) | 27 |
| FaiI | YATR | 5 cut(s) | 147, 200, 270, 291, 306 |
| FaqI | GGGAC | 2 cut(s) | 52, 143 |
| Fnu4HI | GCNGC | 1 cut(s) | 183 |
| FokI | GGATG | 2 cut(s) | 63, 182 |
| Fsp4HI | GCNGC | 1 cut(s) | 183 |
| GluI | GCNGC | 1 cut(s) | 183 |
| GsaI | CCCAGC | 1 cut(s) | 234 |
| HphI | GGTGA | 1 cut(s) | 247 |
| Hpy166II | GTNNAC | 1 cut(s) | 223 |
| Hpy188I | TCNGA | 2 cut(s) | 57, 190 |
| Hpy188III | TCNNGA | 1 cut(s) | 335 |
| Hpy8I | GTNNAC | 1 cut(s) | 223 |
| HpyAV | CCTTC | 1 cut(s) | 43 |
| HpyCH4III | ACNGT | 1 cut(s) | 227 |
| HpyCH4V | TGCA | 4 cut(s) | 109, 173, 209, 284 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 82, 179, 191 |
| HpyF3I | CTNAG | 2 cut(s) | 81, 99 |
| Kzo9I | GATC | 1 cut(s) | 14 |
| LmnI | GCTCC | 1 cut(s) | 142 |
| LpnPI | CCDG | 2 cut(s) | 139, 216 |
| Lsp1109I | GCAGC | 1 cut(s) | 169 |
| LweI | GCATC | 2 cut(s) | 85, 160 |
| MaeIII | GTNAC | 1 cut(s) | 18 |
| MalI | GATC | 1 cut(s) | 16 |
| MboI | GATC | 1 cut(s) | 14 |
| MboII | GAAGA | 2 cut(s) | 58, 131 |
| MluCI | AATT | 2 cut(s) | 261, 330 |
| MnlI | CCTC | 4 cut(s) | 90, 143, 150, 272 |
| MseI | TTAA | 3 cut(s) | 89, 257, 329 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 82, 179, 191 |
| NdeII | GATC | 1 cut(s) | 14 |
| NmuCI | GTSAC | 1 cut(s) | 18 |
| PkrI | GCNGC | 1 cut(s) | 184 |
| PspFI | CCCAGC | 1 cut(s) | 230 |
| SaqAI | TTAA | 3 cut(s) | 89, 257, 329 |
| SatI | GCNGC | 1 cut(s) | 183 |
| Sau3AI | GATC | 1 cut(s) | 14 |
| SetI | ASST | 6 cut(s) | 54, 70, 105, 184, 283, 344 |
| SfaNI | GCATC | 2 cut(s) | 85, 160 |
| SgeI | CNNG | 9 cut(s) | 24, 49, 81, 128, 166, 191, 218, 224, 243 |
| Sse9I | AATT | 2 cut(s) | 261, 330 |
| StyI | CCWWGG | 1 cut(s) | 68 |
| TaaI | ACNGT | 1 cut(s) | 227 |
| TaqI | TCGA | 1 cut(s) | 178 |
| TasI | AATT | 2 cut(s) | 261, 330 |
| Tru1I | TTAA | 3 cut(s) | 89, 257, 329 |
| Tru9I | TTAA | 3 cut(s) | 89, 257, 329 |
| TscAI | CASTG | 2 cut(s) | 139, 232 |
| TseFI | GTSAC | 1 cut(s) | 18 |
| TseI | GCWGC | 1 cut(s) | 182 |
| Tsp45I | GTSAC | 1 cut(s) | 18 |
| TspDTI | ATGAA | 1 cut(s) | 306 |
| TspRI | CASTG | 2 cut(s) | 139, 232 |