No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G58100 AT5G58100 |
| fragaria_vesca | FvH4_4g03800 |
| malus_domestica | MD04G1001000.v1.1 |
| prunus_persica | Prupe.1G001000_v2.0.a1 |
| pyrus_communis | pycom04g00160 |
| rosa_chinensis | RchiOBHm_Chr4g0393651 |
| rosa_laevigata | RLG00000009738 |
| rosa_multiflora | Rmu_sc0010124.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00338820 |
| rosa_rugosa | Rorug03G0371900.1 |
| rosa_samantha | Rh4AG048400 Rh4BG044800 Rh4CG051800 |
| rosa_wichuraiana | Rw4G003840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 1205, 1879 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1241 |
| AccBSI | CCGCTC | 1 cut(s) | 406 |
| AccI | GTMKAC | 1 cut(s) | 2087 |
| AciI | CCGC | 3 cut(s) | 406, 1046, 1412 |
| AclWI | GGATC | 3 cut(s) | 43, 118, 1901 |
| AcsI | RAATTY | 6 cut(s) | 337, 821, 841, 1311, 1361, 1603 |
| AcuI | CTGAAG | 1 cut(s) | 981 |
| AcvI | CACGTG | 2 cut(s) | 1652, 2758 |
| AdeI | CACNNNGTG | 1 cut(s) | 2761 |
| AfaI | GTAC | 7 cut(s) | 320, 920, 986, 1956, 1999, 2776, 2808 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 458, 1241, 2082, 2682 |
| AjiI | CACGTC | 1 cut(s) | 1138 |
| AjnI | CCWGG | 2 cut(s) | 238, 2204 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1582, 1614 |
| AleI | CACNNNNGTG | 1 cut(s) | 2242 |
| Alw21I | GWGCWC | 2 cut(s) | 1524, 2757 |
| Alw26I | GTCTC | 5 cut(s) | 904, 1128, 1693, 2032, 2556 |
| Alw44I | GTGCAC | 1 cut(s) | 2753 |
| AlwI | GGATC | 3 cut(s) | 43, 118, 1901 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 332, 2041 |
| AoxI | GGCC | 5 cut(s) | 1392, 1923, 2258, 2673, 2825 |
| ApaLI | GTGCAC | 1 cut(s) | 2753 |
| ApeKI | GCWGC | 7 cut(s) | 135, 1946, 1949, 2233, 2270, 2279, 2282 |
| ApoI | RAATTY | 6 cut(s) | 337, 821, 841, 1311, 1361, 1603 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 885, 1254, 1607, 2544 |
| AspS9I | GGNCC | 4 cut(s) | 1217, 1232, 1816, 2259 |
| AsuHPI | GGTGA | 7 cut(s) | 221, 380, 1166, 1388, 1550, 1704, 2135 |
| AvaII | GGWCC | 3 cut(s) | 1217, 1232, 1816 |
| AxyI | CCTNAGG | 1 cut(s) | 393 |
| BaeGI | GKGCMC | 1 cut(s) | 2757 |
| BanII | GRGCYC | 1 cut(s) | 1524 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1323, 1355, 2460, 2492 |
| BauI | CACGAG | 1 cut(s) | 1225 |
| BbrPI | CACGTG | 2 cut(s) | 1652, 2758 |
| BbsI | GAAGAC | 3 cut(s) | 5, 142, 969 |
| Bbv12I | GWGCWC | 2 cut(s) | 1524, 2757 |
| BbvI | GCAGC | 7 cut(s) | 147, 1958, 1961, 2245, 2257, 2266, 2269 |
| BccI | CCATC | 9 cut(s) | 353, 522, 679, 1721, 1727, 1829, 2223, 2270, 2399 |
| BceAI | ACGGC | 1 cut(s) | 1937 |
| BciT130I | CCWGG | 2 cut(s) | 240, 2206 |
| BclI | TGATCA | 2 cut(s) | 424, 2047 |
| BcoDI | GTCTC | 5 cut(s) | 904, 1128, 1693, 2032, 2556 |
| BfaI | CTAG | 8 cut(s) | 120, 702, 1967, 2093, 2297, 2321, 2507, 2567 |
| BfmI | CTRYAG | 1 cut(s) | 860 |
| BfuAI | ACCTGC | 2 cut(s) | 1205, 1879 |
| BisI | GCNGC | 7 cut(s) | 136, 1947, 1950, 2234, 2271, 2280, 2283 |
| BlsI | GCNGC | 7 cut(s) | 137, 1948, 1951, 2235, 2272, 2281, 2284 |
| Bme1390I | CCNGG | 2 cut(s) | 240, 2206 |
| Bme18I | GGWCC | 3 cut(s) | 1217, 1232, 1816 |
| BmgBI | CACGTC | 1 cut(s) | 1138 |
| BmgT120I | GGNCC | 4 cut(s) | 1217, 1232, 1816, 2259 |
| BmiI | GGNNCC | 2 cut(s) | 450, 1233 |
| BmrFI | CCNGG | 2 cut(s) | 240, 2206 |
| BmrI | ACTGGG | 1 cut(s) | 320 |
| BmsI | GCATC | 6 cut(s) | 110, 937, 1336, 2035, 2366, 2632 |
| BmuI | ACTGGG | 1 cut(s) | 320 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1554 |
| BpiI | GAAGAC | 3 cut(s) | 5, 142, 969 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 453, 485, 2660, 2692 |
| BpmI | CTGGAG | 1 cut(s) | 1152 |
| BpuEI | CTTGAG | 4 cut(s) | 278, 422, 1805, 2385 |
| BsaAI | YACGTR | 3 cut(s) | 206, 1652, 2758 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1383 |
| BsaI | GGTCTC | 1 cut(s) | 904 |
| BsaJI | CCNNGG | 3 cut(s) | 373, 2205, 2800 |
| BsaWI | WCCGGW | 1 cut(s) | 792 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 458, 1241, 2082, 2682 |
| Bse118I | RCCGGY | 1 cut(s) | 2082 |
| Bse1I | ACTGG | 4 cut(s) | 130, 234, 326, 2363 |
| Bse21I | CCTNAGG | 1 cut(s) | 393 |
| Bse3DI | GCAATG | 3 cut(s) | 1447, 1926, 2228 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1383 |
| BseBI | CCWGG | 2 cut(s) | 240, 2206 |
| BseDI | CCNNGG | 3 cut(s) | 373, 2205, 2800 |
| BseJI | GATNNNNATC | 1 cut(s) | 1383 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 458, 1241, 2082, 2682 |
| BseMI | GCAATG | 3 cut(s) | 1447, 1926, 2228 |
| BseMII | CTCAG | 2 cut(s) | 384, 2567 |
| BseNI | ACTGG | 4 cut(s) | 130, 234, 326, 2363 |
| BseRI | GAGGAG | 4 cut(s) | 36, 1640, 2269, 2684 |
| BseSI | GKGCMC | 1 cut(s) | 2757 |
| BseXI | GCAGC | 7 cut(s) | 147, 1958, 1961, 2245, 2257, 2266, 2269 |
| BsgI | GTGCAG | 4 cut(s) | 1076, 1233, 1320, 2719 |
| BshFI | GGCC | 5 cut(s) | 1394, 1925, 2260, 2675, 2827 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1524, 2757 |
| BsiSI | CCGG | 2 cut(s) | 793, 2083 |
| BslFI | GGGAC | 3 cut(s) | 314, 1245, 1520 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 458, 1241, 2082, 2682 |
| BsmAI | GTCTC | 5 cut(s) | 904, 1128, 1693, 2032, 2556 |
| BsmBI | CGTCTC | 1 cut(s) | 1128 |
| BsmFI | GGGAC | 3 cut(s) | 314, 1245, 1520 |
| BsmI | GAATGC | 1 cut(s) | 873 |
| BsnI | GGCC | 5 cut(s) | 1394, 1925, 2260, 2675, 2827 |
| Bso31I | GGTCTC | 1 cut(s) | 904 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1524, 2757 |
| Bsp143I | GATC | 8 cut(s) | 35, 110, 424, 1333, 1384, 1906, 2047, 2692 |
| BspACI | CCGC | 3 cut(s) | 406, 1046, 1412 |
| BspANI | GGCC | 5 cut(s) | 1394, 1925, 2260, 2675, 2827 |
| BspCNI | CTCAG | 2 cut(s) | 385, 2566 |
| BspHI | TCATGA | 2 cut(s) | 66, 1621 |
| BspLI | GGNNCC | 2 cut(s) | 450, 1233 |
| BspMAI | CTGCAG | 1 cut(s) | 864 |
| BspMI | ACCTGC | 2 cut(s) | 1205, 1879 |
| BspPI | GGATC | 3 cut(s) | 43, 118, 1901 |
| BspQI | GCTCTTC | 1 cut(s) | 1936 |
| BspTNI | GGTCTC | 1 cut(s) | 904 |
| BsrBI | CCGCTC | 1 cut(s) | 406 |
| BsrDI | GCAATG | 3 cut(s) | 1447, 1926, 2228 |
| BsrFI | RCCGGY | 1 cut(s) | 2082 |
| BsrI | ACTGG | 4 cut(s) | 130, 234, 326, 2363 |
| BssAI | RCCGGY | 1 cut(s) | 2082 |
| BssECI | CCNNGG | 3 cut(s) | 373, 2205, 2800 |
| BssMI | GATC | 8 cut(s) | 35, 110, 424, 1333, 1384, 1906, 2047, 2692 |
| BssSI | CACGAG | 1 cut(s) | 1225 |
| BssT1I | CCWWGG | 2 cut(s) | 373, 2800 |
| Bst2BI | CACGAG | 1 cut(s) | 1225 |
| Bst2UI | CCWGG | 2 cut(s) | 240, 2206 |
| Bst6I | CTCTTC | 3 cut(s) | 170, 1936, 2463 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 944, 1730, 2032 |
| BstBAI | YACGTR | 3 cut(s) | 206, 1652, 2758 |
| BstC8I | GCNNGC | 4 cut(s) | 994, 1473, 2073, 2564 |
| BstDEI | CTNAG | 4 cut(s) | 393, 1268, 2553, 2665 |
| BstEII | GGTNACC | 1 cut(s) | 788 |
| BstKTI | GATC | 8 cut(s) | 38, 113, 427, 1336, 1387, 1909, 2050, 2695 |
| BstMAI | GTCTC | 5 cut(s) | 904, 1128, 1693, 2032, 2556 |
| BstMBI | GATC | 8 cut(s) | 35, 110, 424, 1333, 1384, 1906, 2047, 2692 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 944, 1577, 1730, 1943, 2032, 2276, 2279 |
| BstNI | CCWGG | 2 cut(s) | 240, 2206 |
| BstNSI | RCATGY | 1 cut(s) | 996 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1554 |
| BstPI | GGTNACC | 1 cut(s) | 788 |
| BstSCI | CCNGG | 2 cut(s) | 238, 2204 |
| BstSFI | CTRYAG | 1 cut(s) | 860 |
| BstSLI | GKGCMC | 1 cut(s) | 2757 |
| BstV1I | GCAGC | 7 cut(s) | 147, 1958, 1961, 2245, 2257, 2266, 2269 |
| BstV2I | GAAGAC | 3 cut(s) | 5, 142, 969 |
| BstX2I | RGATCY | 2 cut(s) | 110, 1906 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2109, 2244 |
| BstYI | RGATCY | 2 cut(s) | 110, 1906 |
| Bsu36I | CCTNAGG | 1 cut(s) | 393 |
| BsuRI | GGCC | 5 cut(s) | 1394, 1925, 2260, 2675, 2827 |
| BtgZI | GCGATG | 1 cut(s) | 1705 |
| BtrI | CACGTC | 1 cut(s) | 1138 |
| BtsI | GCAGTG | 1 cut(s) | 2731 |
| BtsIMutI | CAGTG | 7 cut(s) | 658, 966, 981, 1618, 1938, 1958, 2731 |
| BveI | ACCTGC | 2 cut(s) | 1205, 1879 |
| Cac8I | GCNNGC | 4 cut(s) | 994, 1473, 2073, 2564 |
| CaiI | CAGNNNCTG | 2 cut(s) | 332, 2041 |
| CciI | TCATGA | 2 cut(s) | 66, 1621 |
| Cfr10I | RCCGGY | 1 cut(s) | 2082 |
| Cfr13I | GGNCC | 4 cut(s) | 1217, 1232, 1816, 2259 |
| Csp6I | GTAC | 7 cut(s) | 319, 919, 985, 1955, 1998, 2775, 2807 |
| CviQI | GTAC | 7 cut(s) | 319, 919, 985, 1955, 1998, 2775, 2807 |
| DdeI | CTNAG | 4 cut(s) | 393, 1268, 2553, 2665 |
| DpnI | GATC | 8 cut(s) | 37, 112, 426, 1335, 1386, 1908, 2049, 2694 |
| DpnII | GATC | 8 cut(s) | 35, 110, 424, 1333, 1384, 1906, 2047, 2692 |
| DraIII | CACNNNGTG | 1 cut(s) | 2761 |
| Eam1104I | CTCTTC | 3 cut(s) | 170, 1936, 2463 |
| EarI | CTCTTC | 3 cut(s) | 170, 1936, 2463 |
| Ecl136II | GAGCTC | 1 cut(s) | 1522 |
| Eco130I | CCWWGG | 2 cut(s) | 373, 2800 |
| Eco147I | AGGCCT | 1 cut(s) | 2675 |
| Eco24I | GRGCYC | 1 cut(s) | 1524 |
| Eco31I | GGTCTC | 1 cut(s) | 904 |
| Eco32I | GATATC | 3 cut(s) | 716, 1051, 1755 |
| Eco47I | GGWCC | 3 cut(s) | 1217, 1232, 1816 |
| Eco53kI | GAGCTC | 1 cut(s) | 1522 |
| Eco57I | CTGAAG | 1 cut(s) | 981 |
| Eco72I | CACGTG | 2 cut(s) | 1652, 2758 |
| Eco81I | CCTNAGG | 1 cut(s) | 393 |
| Eco91I | GGTNACC | 1 cut(s) | 788 |
| EcoICRI | GAGCTC | 1 cut(s) | 1522 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1217 |
| EcoO65I | GGTNACC | 1 cut(s) | 788 |
| EcoRII | CCWGG | 2 cut(s) | 238, 2204 |
| EcoRV | GATATC | 3 cut(s) | 716, 1051, 1755 |
| EcoT14I | CCWWGG | 2 cut(s) | 373, 2800 |
| EcoT22I | ATGCAT | 3 cut(s) | 634, 736, 994 |
| EcoT38I | GRGCYC | 1 cut(s) | 1524 |
| ErhI | CCWWGG | 2 cut(s) | 373, 2800 |
| Esp3I | CGTCTC | 1 cut(s) | 1128 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1455, 1487, 2055, 2087 |
| FaqI | GGGAC | 3 cut(s) | 314, 1245, 1520 |
| FauNDI | CATATG | 1 cut(s) | 634 |
| FbaI | TGATCA | 2 cut(s) | 424, 2047 |
| FblI | GTMKAC | 1 cut(s) | 2087 |
| Fnu4HI | GCNGC | 7 cut(s) | 136, 1947, 1950, 2234, 2271, 2280, 2283 |
| FriOI | GRGCYC | 1 cut(s) | 1524 |
| Fsp4HI | GCNGC | 7 cut(s) | 136, 1947, 1950, 2234, 2271, 2280, 2283 |
| FspBI | CTAG | 8 cut(s) | 120, 702, 1967, 2093, 2297, 2321, 2507, 2567 |
| GluI | GCNGC | 7 cut(s) | 136, 1947, 1950, 2234, 2271, 2280, 2283 |
| GsuI | CTGGAG | 1 cut(s) | 1152 |
| HaeIII | GGCC | 5 cut(s) | 1394, 1925, 2260, 2675, 2827 |
| HapII | CCGG | 2 cut(s) | 793, 2083 |
| HincII | GTYRAC | 1 cut(s) | 2572 |
| HindII | GTYRAC | 1 cut(s) | 2572 |
| HindIII | AAGCTT | 5 cut(s) | 296, 383, 1103, 1469, 2069 |
| HpaII | CCGG | 2 cut(s) | 793, 2083 |
| HphI | GGTGA | 7 cut(s) | 221, 380, 1166, 1388, 1550, 1704, 2135 |
| Hpy166II | GTNNAC | 8 cut(s) | 679, 1816, 2088, 2126, 2140, 2572, 2755, 2807 |
| Hpy8I | GTNNAC | 8 cut(s) | 679, 1816, 2088, 2126, 2140, 2572, 2755, 2807 |
| HpyAV | CCTTC | 7 cut(s) | 63, 1244, 1529, 1725, 1869, 2208, 2324 |
| HpyCH4IV | ACGT | 4 cut(s) | 205, 1137, 1651, 2757 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 944, 1577, 1730, 1943, 2032, 2276, 2279 |
| HpyF3I | CTNAG | 4 cut(s) | 393, 1268, 2553, 2665 |
| HpySE526I | ACGT | 4 cut(s) | 205, 1137, 1651, 2757 |
| Ksp22I | TGATCA | 2 cut(s) | 424, 2047 |
| Kzo9I | GATC | 8 cut(s) | 35, 110, 424, 1333, 1384, 1906, 2047, 2692 |
| LguI | GCTCTTC | 1 cut(s) | 1936 |
| LmnI | GCTCC | 3 cut(s) | 1527, 2445, 2515 |
| Lsp1109I | GCAGC | 7 cut(s) | 147, 1958, 1961, 2245, 2257, 2266, 2269 |
| LweI | GCATC | 6 cut(s) | 110, 937, 1336, 2035, 2366, 2632 |
| MaeI | CTAG | 8 cut(s) | 120, 702, 1967, 2093, 2297, 2321, 2507, 2567 |
| MaeII | ACGT | 4 cut(s) | 205, 1137, 1651, 2757 |
| MaeIII | GTNAC | 8 cut(s) | 530, 580, 638, 788, 955, 1854, 1890, 2617 |
| MalI | GATC | 8 cut(s) | 37, 112, 426, 1335, 1386, 1908, 2049, 2694 |
| MbiI | CCGCTC | 1 cut(s) | 406 |
| MboI | GATC | 8 cut(s) | 35, 110, 424, 1333, 1384, 1906, 2047, 2692 |
| MfeI | CAATTG | 4 cut(s) | 2349, 2436, 2480, 2851 |
| MflI | RGATCY | 2 cut(s) | 110, 1906 |
| MhlI | GDGCHC | 2 cut(s) | 1524, 2757 |
| MlyI | GAGTC | 3 cut(s) | 761, 818, 2480 |
| MmeI | TCCRAC | 3 cut(s) | 691, 1771, 2353 |
| Mph1103I | ATGCAT | 3 cut(s) | 634, 736, 994 |
| MroXI | GAANNNNTTC | 4 cut(s) | 885, 1254, 1607, 2544 |
| MslI | CAYNNNNRTG | 4 cut(s) | 65, 1674, 1743, 2242 |
| MspA1I | CMGCKG | 1 cut(s) | 1238 |
| MspI | CCGG | 2 cut(s) | 793, 2083 |
| MspR9I | CCNGG | 2 cut(s) | 240, 2206 |
| MunI | CAATTG | 4 cut(s) | 2349, 2436, 2480, 2851 |
| Mva1269I | GAATGC | 1 cut(s) | 873 |
| MvaI | CCWGG | 2 cut(s) | 240, 2206 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 944, 1577, 1730, 1943, 2032, 2276, 2279 |
| NdeI | CATATG | 1 cut(s) | 634 |
| NdeII | GATC | 8 cut(s) | 35, 110, 424, 1333, 1384, 1906, 2047, 2692 |
| NlaIV | GGNNCC | 2 cut(s) | 450, 1233 |
| NmuCI | GTSAC | 1 cut(s) | 530 |
| NsiI | ATGCAT | 3 cut(s) | 634, 736, 994 |
| NspI | RCATGY | 1 cut(s) | 996 |
| OliI | CACNNNNGTG | 1 cut(s) | 2242 |
| PaeI | GCATGC | 1 cut(s) | 996 |
| PagI | TCATGA | 2 cut(s) | 66, 1621 |
| PceI | AGGCCT | 1 cut(s) | 2675 |
| PciSI | GCTCTTC | 1 cut(s) | 1936 |
| PctI | GAATGC | 1 cut(s) | 873 |
| PdmI | GAANNNNTTC | 4 cut(s) | 885, 1254, 1607, 2544 |
| PfeI | GAWTC | 7 cut(s) | 5, 227, 311, 754, 856, 2009, 2779 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1241 |
| PfoI | TCCNGGA | 1 cut(s) | 238 |
| PkrI | GCNGC | 7 cut(s) | 137, 1948, 1951, 2235, 2272, 2281, 2284 |
| PleI | GAGTC | 3 cut(s) | 761, 817, 2479 |
| PmaCI | CACGTG | 2 cut(s) | 1652, 2758 |
| PmlI | CACGTG | 2 cut(s) | 1652, 2758 |
| PpsI | GAGTC | 3 cut(s) | 761, 817, 2479 |
| Ppu21I | YACGTR | 3 cut(s) | 206, 1652, 2758 |
| PpuMI | RGGWCCY | 1 cut(s) | 1217 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1554 |
| Psp124BI | GAGCTC | 1 cut(s) | 1524 |
| Psp5II | RGGWCCY | 1 cut(s) | 1217 |
| Psp6I | CCWGG | 2 cut(s) | 238, 2204 |
| PspCI | CACGTG | 2 cut(s) | 1652, 2758 |
| PspEI | GGTNACC | 1 cut(s) | 788 |
| PspGI | CCWGG | 2 cut(s) | 238, 2204 |
| PspN4I | GGNNCC | 2 cut(s) | 450, 1233 |
| PspPI | GGNCC | 4 cut(s) | 1217, 1232, 1816, 2259 |
| PspPPI | RGGWCCY | 1 cut(s) | 1217 |
| PstI | CTGCAG | 1 cut(s) | 864 |
| PstNI | CAGNNNCTG | 2 cut(s) | 332, 2041 |
| PsuI | RGATCY | 2 cut(s) | 110, 1906 |
| PvuII | CAGCTG | 1 cut(s) | 1238 |
| RsaI | GTAC | 7 cut(s) | 320, 920, 986, 1956, 1999, 2776, 2808 |
| RsaNI | GTAC | 7 cut(s) | 319, 919, 985, 1955, 1998, 2775, 2807 |
| RseI | CAYNNNNRTG | 4 cut(s) | 65, 1674, 1743, 2242 |
| SacI | GAGCTC | 1 cut(s) | 1524 |
| SapI | GCTCTTC | 1 cut(s) | 1936 |
| SatI | GCNGC | 7 cut(s) | 136, 1947, 1950, 2234, 2271, 2280, 2283 |
| Sau3AI | GATC | 8 cut(s) | 35, 110, 424, 1333, 1384, 1906, 2047, 2692 |
| Sau96I | GGNCC | 4 cut(s) | 1217, 1232, 1816, 2259 |
| SchI | GAGTC | 3 cut(s) | 761, 818, 2480 |
| ScrFI | CCNGG | 2 cut(s) | 240, 2206 |
| SduI | GDGCHC | 2 cut(s) | 1524, 2757 |
| SfaNI | GCATC | 6 cut(s) | 110, 937, 1336, 2035, 2366, 2632 |
| SfcI | CTRYAG | 1 cut(s) | 860 |
| SinI | GGWCC | 3 cut(s) | 1217, 1232, 1816 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 65, 1674, 1743, 2242 |
| SmlI | CTYRAG | 4 cut(s) | 293, 401, 1820, 2400 |
| SmoI | CTYRAG | 4 cut(s) | 293, 401, 1820, 2400 |
| SphI | GCATGC | 1 cut(s) | 996 |
| SseBI | AGGCCT | 1 cut(s) | 2675 |
| SsiI | CCGC | 3 cut(s) | 406, 1046, 1412 |
| SspI | AATATT | 2 cut(s) | 280, 591 |
| SspMI | CTAG | 8 cut(s) | 120, 702, 1967, 2093, 2297, 2321, 2507, 2567 |
| SstI | GAGCTC | 1 cut(s) | 1524 |
| StuI | AGGCCT | 1 cut(s) | 2675 |
| StyD4I | CCNGG | 2 cut(s) | 238, 2204 |
| StyI | CCWWGG | 2 cut(s) | 373, 2800 |
| TaiI | ACGT | 4 cut(s) | 208, 1140, 1654, 2760 |
| TaqI | TCGA | 2 cut(s) | 672, 2007 |
| TatI | WGTACW | 1 cut(s) | 2806 |
| TfiI | GAWTC | 7 cut(s) | 5, 227, 311, 754, 856, 2009, 2779 |
| TscAI | CASTG | 7 cut(s) | 658, 973, 981, 1618, 1938, 1965, 2738 |
| TseFI | GTSAC | 1 cut(s) | 530 |
| TseI | GCWGC | 7 cut(s) | 135, 1946, 1949, 2233, 2270, 2279, 2282 |
| Tsp45I | GTSAC | 1 cut(s) | 530 |
| TspGWI | ACGGA | 2 cut(s) | 465, 1985 |
| TspRI | CASTG | 7 cut(s) | 658, 973, 981, 1618, 1938, 1965, 2738 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1241 |
| VneI | GTGCAC | 1 cut(s) | 2753 |
| VpaK11BI | GGWCC | 3 cut(s) | 1217, 1232, 1816 |
| XapI | RAATTY | 6 cut(s) | 337, 821, 841, 1311, 1361, 1603 |
| XbaI | TCTAGA | 1 cut(s) | 119 |
| XceI | RCATGY | 1 cut(s) | 996 |
| XmiI | GTMKAC | 1 cut(s) | 2087 |
| XmnI | GAANNNNTTC | 4 cut(s) | 885, 1254, 1607, 2544 |
| XspI | CTAG | 8 cut(s) | 120, 702, 1967, 2093, 2297, 2321, 2507, 2567 |
| Zsp2I | ATGCAT | 3 cut(s) | 634, 736, 994 |