The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom04g05930 pycom04g09980 pycom04g13690 pycom05g15520 pycom07g05540 pycom09g03940 pycom13g03240 pycom16g04970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 209, 227 |
| AcuI | CTGAAG | 1 cut(s) | 183 |
| AfaI | GTAC | 1 cut(s) | 173 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 230 |
| AgsI | TTSAA | 1 cut(s) | 215 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 201 |
| Alw26I | GTCTC | 1 cut(s) | 253 |
| Ama87I | CYCGRG | 1 cut(s) | 91 |
| ApoI | RAATTY | 2 cut(s) | 209, 227 |
| AspLEI | GCGC | 2 cut(s) | 241, 250 |
| AsuHPI | GGTGA | 2 cut(s) | 48, 213 |
| AvaI | CYCGRG | 1 cut(s) | 91 |
| BauI | CACGAG | 1 cut(s) | 188 |
| BccI | CCATC | 2 cut(s) | 61, 67 |
| BcoDI | GTCTC | 1 cut(s) | 253 |
| BfaI | CTAG | 2 cut(s) | 146, 245 |
| BfoI | RGCGCY | 1 cut(s) | 242 |
| BglII | AGATCT | 2 cut(s) | 95, 148 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 201 |
| BmeT110I | CYCGRG | 1 cut(s) | 91 |
| BsaWI | WCCGGW | 1 cut(s) | 223 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 230 |
| Bse1I | ACTGG | 1 cut(s) | 161 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 230 |
| BseMII | CTCAG | 1 cut(s) | 278 |
| BseNI | ACTGG | 1 cut(s) | 161 |
| BsiHKCI | CYCGRG | 1 cut(s) | 91 |
| BsiSI | CCGG | 1 cut(s) | 224 |
| BslFI | GGGAC | 1 cut(s) | 284 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 230 |
| BsmAI | GTCTC | 1 cut(s) | 253 |
| BsmBI | CGTCTC | 1 cut(s) | 253 |
| BsmFI | GGGAC | 1 cut(s) | 284 |
| BsoBI | CYCGRG | 1 cut(s) | 91 |
| Bsp143I | GATC | 2 cut(s) | 95, 148 |
| BspCNI | CTCAG | 1 cut(s) | 279 |
| BsrI | ACTGG | 1 cut(s) | 161 |
| BssMI | GATC | 2 cut(s) | 95, 148 |
| BssSI | CACGAG | 1 cut(s) | 188 |
| Bst2BI | CACGAG | 1 cut(s) | 188 |
| BstDEI | CTNAG | 1 cut(s) | 287 |
| BstH2I | RGCGCY | 1 cut(s) | 242 |
| BstHHI | GCGC | 2 cut(s) | 241, 250 |
| BstKTI | GATC | 2 cut(s) | 98, 151 |
| BstMAI | GTCTC | 1 cut(s) | 253 |
| BstMBI | GATC | 2 cut(s) | 95, 148 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 245, 247 |
| BstX2I | RGATCY | 2 cut(s) | 95, 148 |
| BstYI | RGATCY | 2 cut(s) | 95, 148 |
| BtsI | GCAGTG | 1 cut(s) | 257 |
| BtsIMutI | CAGTG | 1 cut(s) | 257 |
| CfoI | GCGC | 2 cut(s) | 241, 250 |
| Csp6I | GTAC | 1 cut(s) | 172 |
| CviAII | CATG | 1 cut(s) | 81 |
| CviJI | RGCY | 1 cut(s) | 32 |
| CviKI_1 | RGCY | 1 cut(s) | 32 |
| CviQI | GTAC | 1 cut(s) | 172 |
| DdeI | CTNAG | 1 cut(s) | 287 |
| DpnI | GATC | 2 cut(s) | 97, 150 |
| DpnII | GATC | 2 cut(s) | 95, 148 |
| DriI | GACNNNNNGTC | 1 cut(s) | 201 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 201 |
| Eco57I | CTGAAG | 1 cut(s) | 183 |
| Eco88I | CYCGRG | 1 cut(s) | 91 |
| EcoRI | GAATTC | 1 cut(s) | 227 |
| Esp3I | CGTCTC | 1 cut(s) | 253 |
| FaeI | CATG | 1 cut(s) | 84 |
| FaiI | YATR | 2 cut(s) | 82, 275 |
| FaqI | GGGAC | 1 cut(s) | 284 |
| FatI | CATG | 1 cut(s) | 80 |
| FspBI | CTAG | 2 cut(s) | 146, 245 |
| GlaI | GCGC | 2 cut(s) | 240, 249 |
| HaeII | RGCGCY | 1 cut(s) | 242 |
| HapII | CCGG | 1 cut(s) | 224 |
| HhaI | GCGC | 2 cut(s) | 241, 250 |
| Hin1II | CATG | 1 cut(s) | 84 |
| Hin6I | GCGC | 2 cut(s) | 239, 248 |
| HinP1I | GCGC | 2 cut(s) | 239, 248 |
| HincII | GTYRAC | 1 cut(s) | 9 |
| HindII | GTYRAC | 1 cut(s) | 9 |
| HinfI | GANTC | 2 cut(s) | 41, 139 |
| HpaII | CCGG | 1 cut(s) | 224 |
| HphI | GGTGA | 2 cut(s) | 48, 213 |
| Hpy166II | GTNNAC | 1 cut(s) | 9 |
| Hpy188I | TCNGA | 2 cut(s) | 133, 288 |
| Hpy188III | TCNNGA | 5 cut(s) | 91, 93, 146, 154, 190 |
| Hpy8I | GTNNAC | 1 cut(s) | 9 |
| HpyCH4IV | ACGT | 1 cut(s) | 111 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 245, 247 |
| HpyF3I | CTNAG | 1 cut(s) | 287 |
| HpySE526I | ACGT | 1 cut(s) | 111 |
| Hsp92II | CATG | 1 cut(s) | 84 |
| HspAI | GCGC | 2 cut(s) | 239, 248 |
| Kzo9I | GATC | 2 cut(s) | 95, 148 |
| LpnPI | CCDG | 4 cut(s) | 139, 174, 186, 237 |
| MaeI | CTAG | 2 cut(s) | 146, 245 |
| MaeII | ACGT | 1 cut(s) | 111 |
| MaeIII | GTNAC | 1 cut(s) | 190 |
| MalI | GATC | 2 cut(s) | 97, 150 |
| MboI | GATC | 2 cut(s) | 95, 148 |
| MboII | GAAGA | 1 cut(s) | 134 |
| MflI | RGATCY | 2 cut(s) | 95, 148 |
| MluCI | AATT | 3 cut(s) | 209, 215, 227 |
| MnlI | CCTC | 4 cut(s) | 7, 18, 22, 282 |
| MspI | CCGG | 1 cut(s) | 224 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 245, 247 |
| NdeII | GATC | 2 cut(s) | 95, 148 |
| NlaIII | CATG | 1 cut(s) | 84 |
| NmuCI | GTSAC | 1 cut(s) | 190 |
| PaeR7I | CTCGAG | 1 cut(s) | 91 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 108 |
| PfeI | GAWTC | 2 cut(s) | 41, 139 |
| PsuI | RGATCY | 2 cut(s) | 95, 148 |
| RsaI | GTAC | 1 cut(s) | 173 |
| RsaNI | GTAC | 1 cut(s) | 172 |
| Sau3AI | GATC | 2 cut(s) | 95, 148 |
| SetI | ASST | 4 cut(s) | 114, 205, 280, 293 |
| Sfr274I | CTCGAG | 1 cut(s) | 91 |
| SlaI | CTCGAG | 1 cut(s) | 91 |
| SmlI | CTYRAG | 1 cut(s) | 91 |
| SmoI | CTYRAG | 1 cut(s) | 91 |
| Sse9I | AATT | 3 cut(s) | 209, 215, 227 |
| SspMI | CTAG | 2 cut(s) | 146, 245 |
| TaiI | ACGT | 1 cut(s) | 114 |
| TaqI | TCGA | 2 cut(s) | 92, 102 |
| TasI | AATT | 3 cut(s) | 209, 215, 227 |
| TfiI | GAWTC | 2 cut(s) | 41, 139 |
| TscAI | CASTG | 1 cut(s) | 257 |
| TseFI | GTSAC | 1 cut(s) | 190 |
| Tsp45I | GTSAC | 1 cut(s) | 190 |
| TspDTI | ATGAA | 2 cut(s) | 33, 69 |
| TspGWI | ACGGA | 1 cut(s) | 26 |
| TspRI | CASTG | 1 cut(s) | 257 |
| XapI | RAATTY | 2 cut(s) | 209, 227 |
| XbaI | TCTAGA | 1 cut(s) | 145 |
| XhoI | CTCGAG | 1 cut(s) | 91 |
| XspI | CTAG | 2 cut(s) | 146, 245 |