The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom04g05930 pycom04g09980 pycom04g13690 pycom05g15520 pycom07g05540 pycom09g03940 pycom13g03240 pycom16g04970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 81 |
| AcsI | RAATTY | 2 cut(s) | 200, 218 |
| AcuI | CTGAAG | 1 cut(s) | 174 |
| AfaI | GTAC | 1 cut(s) | 164 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 221 |
| AgsI | TTSAA | 1 cut(s) | 206 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 192 |
| AlwI | GGATC | 1 cut(s) | 81 |
| ApoI | RAATTY | 2 cut(s) | 200, 218 |
| AsuHPI | GGTGA | 2 cut(s) | 39, 204 |
| BauI | CACGAG | 1 cut(s) | 179 |
| BccI | CCATC | 2 cut(s) | 52, 58 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 192 |
| BpuEI | CTTGAG | 1 cut(s) | 67 |
| BsaWI | WCCGGW | 1 cut(s) | 214 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 221 |
| Bse1I | ACTGG | 1 cut(s) | 152 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 221 |
| BseNI | ACTGG | 1 cut(s) | 152 |
| BsiSI | CCGG | 1 cut(s) | 215 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 221 |
| Bsp143I | GATC | 3 cut(s) | 86, 105, 139 |
| BspPI | GGATC | 1 cut(s) | 81 |
| BsrI | ACTGG | 1 cut(s) | 152 |
| BssMI | GATC | 3 cut(s) | 86, 105, 139 |
| BssSI | CACGAG | 1 cut(s) | 179 |
| Bst2BI | CACGAG | 1 cut(s) | 179 |
| BstKTI | GATC | 3 cut(s) | 89, 108, 142 |
| BstMBI | GATC | 3 cut(s) | 86, 105, 139 |
| BstX2I | RGATCY | 1 cut(s) | 86 |
| BstYI | RGATCY | 1 cut(s) | 86 |
| CseI | GACGC | 1 cut(s) | 238 |
| Csp6I | GTAC | 1 cut(s) | 163 |
| CviAII | CATG | 1 cut(s) | 72 |
| CviJI | RGCY | 2 cut(s) | 23, 151 |
| CviKI_1 | RGCY | 2 cut(s) | 23, 151 |
| CviQI | GTAC | 1 cut(s) | 163 |
| DpnI | GATC | 3 cut(s) | 88, 107, 141 |
| DpnII | GATC | 3 cut(s) | 86, 105, 139 |
| DriI | GACNNNNNGTC | 1 cut(s) | 192 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 192 |
| Eco57I | CTGAAG | 1 cut(s) | 174 |
| EcoRI | GAATTC | 1 cut(s) | 218 |
| FaeI | CATG | 1 cut(s) | 75 |
| FaiI | YATR | 1 cut(s) | 73 |
| FatI | CATG | 1 cut(s) | 71 |
| HapII | CCGG | 1 cut(s) | 215 |
| HgaI | GACGC | 1 cut(s) | 238 |
| Hin1II | CATG | 1 cut(s) | 75 |
| HinfI | GANTC | 2 cut(s) | 32, 130 |
| HpaII | CCGG | 1 cut(s) | 215 |
| HphI | GGTGA | 2 cut(s) | 39, 204 |
| Hpy188I | TCNGA | 1 cut(s) | 124 |
| Hpy188III | TCNNGA | 4 cut(s) | 84, 137, 145, 181 |
| Hpy99I | CGWCG | 1 cut(s) | 95 |
| HpyCH4IV | ACGT | 1 cut(s) | 102 |
| HpySE526I | ACGT | 1 cut(s) | 102 |
| Hsp92II | CATG | 1 cut(s) | 75 |
| Kzo9I | GATC | 3 cut(s) | 86, 105, 139 |
| LpnPI | CCDG | 7 cut(s) | 94, 130, 145, 165, 177, 221, 228 |
| MaeII | ACGT | 1 cut(s) | 102 |
| MaeIII | GTNAC | 2 cut(s) | 181, 226 |
| MalI | GATC | 3 cut(s) | 88, 107, 141 |
| MboI | GATC | 3 cut(s) | 86, 105, 139 |
| MboII | GAAGA | 1 cut(s) | 125 |
| MflI | RGATCY | 1 cut(s) | 86 |
| MluCI | AATT | 3 cut(s) | 200, 206, 218 |
| MnlI | CCTC | 1 cut(s) | 13 |
| MspI | CCGG | 1 cut(s) | 215 |
| NdeII | GATC | 3 cut(s) | 86, 105, 139 |
| NlaIII | CATG | 1 cut(s) | 75 |
| NmuCI | GTSAC | 2 cut(s) | 181, 226 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 99, 236 |
| PfeI | GAWTC | 2 cut(s) | 32, 130 |
| PsuI | RGATCY | 1 cut(s) | 86 |
| RsaI | GTAC | 1 cut(s) | 164 |
| RsaNI | GTAC | 1 cut(s) | 163 |
| Sau3AI | GATC | 3 cut(s) | 86, 105, 139 |
| SetI | ASST | 3 cut(s) | 105, 164, 196 |
| SmlI | CTYRAG | 1 cut(s) | 82 |
| SmoI | CTYRAG | 1 cut(s) | 82 |
| Sse9I | AATT | 3 cut(s) | 200, 206, 218 |
| TaiI | ACGT | 1 cut(s) | 105 |
| TaqI | TCGA | 2 cut(s) | 93, 138 |
| TasI | AATT | 3 cut(s) | 200, 206, 218 |
| TfiI | GAWTC | 2 cut(s) | 32, 130 |
| TseFI | GTSAC | 2 cut(s) | 181, 226 |
| Tsp45I | GTSAC | 2 cut(s) | 181, 226 |
| TspDTI | ATGAA | 2 cut(s) | 24, 60 |
| TspGWI | ACGGA | 1 cut(s) | 79 |
| XapI | RAATTY | 2 cut(s) | 200, 218 |