pycom04g06310
TCP Family

Transcription factor TCP9-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0016324
Physical Location & Seq
Forward (+)
6294295 .. 6295689
1395 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1287 bp
ATGCGTGTGGGAACGGGAGAAAAAGAAACTGATCAAAACCCTTATCATTTTCTCGCAGTTTCTCGGCAACCAAACACTCCAATTCTCTCTCAAAGTTTCCTTCGATACAAATATTTTCCGTTTCTTCTGATTCAGTTTGCAAGAATGACGTCGTATTTGGAGGATCAGGACGAAGACGGAGGTGCCTCTGATCTCAGCACCAGCACCGGAGACCCGGGAGACAACGACCATACCAACGGAGACGGTGTCGTTTCGATGCAACCCAACTACGAAGAAACGACGGAGTTCCATTCGCTGAAGGAGGAGCCCATTGACTCCGACCCACAACAACCGCCGCAGGGTCACCCCATCGGAATGCTCCAGGACACGATGCAAATGCCCATGCCCATGTCCGTACAGCTACCCGTCTCTGCCCCGACCCGACGATCCTCCACCAAGGACCGCCATACGAAAGTTGAGGGCCGCGGCCGGCGGATCAGAATACCCGCTACCTGCGCTGCCAGGATCTTCCAGCTGACACGGGAACTCGGCCACAAGTCCGACGGAGAAACCGTCCGTTGGCTGCTCGAACACGCCGAGCAAGCCATCATTGAAGCCACAGGCACCGGGACCGTTCCCGCCATCGCCGTCTCCGTCGGCGGGACACTCAAGATACCCACCACCTCATCCACGTCGGTCGAGGACAACTCCTCGCCAACCTCCGCAACCAAGAAGCGAAAACGCCCTTCCAATTCCGAATTCATGGACGTGAGAAAGGACGCCGTGTCGCAGTCGTCGGGCCTTGCTCCGGTAAGTCCCACCGCTCCACAAGGTCTTGTTCCGGTGTGGGCAGTGGGCGGCGCCGGGTTGATCGTTCCGGCAAATGCGTTCTGGATGGGCCCGGTGGGGTCGGGGGCGGGACCTTCTGGTCCACAACCGCAGATATGGGCCCTATCTCCGACGATGACGCCGGTTTTTAACATGGTGGGAGCAGCCCGGCCCATATCGAGTTTCGTGTTGAACAGCGGAGGAGGAGCAGGAGGAGTGGAGGTTCGGGCTCCGTCTCCAGCGCTGTCGAACTCGGCGGCGAGTACGAGCACGGTGGGAGCGAGGGCAGCGAAGAGGTCGTCAACGACAATGGCGCCGCCGAGCGTGAGCTCCTCGAGCAACAACAGTAACGGCAGCGGAAGCGGCGCGACGACCAAGACTCAGATGCTGAGGGATTTTTCTCTGGAAATTTACGATAAGCAGGAGTTGAAGTTCATGGATCAACCTGTTGGACCGGCACATCAACAACAGACCCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TCP

Protein Analysis

429

Amino Acids

45.45

Weight (kDa)

6.26

Isoelectric Point (pI)

55.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TCP PF03634 144 - 246 1.7e-26 TCP family transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016324)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g01340
malus_domestica MD04G1069300.v1.1 MD06G1070100.v1.1
prunus_persica Prupe.5G088800_v2.0.a1
pyrus_communis pycom04g06310 pycom06g07040
rosa_chinensis RchiOBHm_Chr7g0199561
rosa_laevigata RLG00000003785
rosa_roxburghii Rroxscaffold_3G00256610
rosa_rugosa Rorug07G0055300
rosa_samantha Rh7AG180100 Rh7BG183300 Rh7CG189100 Rh7DG182800
rosa_wichuraiana Rw7G015820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 906
AatII GACGTC 1 cut(s) 152
Acc36I ACCTGC 1 cut(s) 500
AccB1I GGYRCC 4 cut(s) 182, 602, 839, 1120
AccBSI CCGCTC 1 cut(s) 803
AccII CGCG 2 cut(s) 465, 1175
AclWI GGATC 5 cut(s) 171, 420, 482, 512, 1254
AcoI YGGCCR 2 cut(s) 466, 529
AcsI RAATTY 2 cut(s) 737, 1215
AcuI CTGAAG 1 cut(s) 317
AcyI GRCGYC 5 cut(s) 149, 759, 840, 947, 1121
AfaI GTAC 2 cut(s) 396, 1072
AfeI AGCGCT 1 cut(s) 1050
AfiI CCNNNNNNNGG 4 cut(s) 338, 558, 639, 787
AgsI TTSAA 3 cut(s) 593, 1000, 1237
AhdI GACNNNNNGTC 1 cut(s) 763
AjiI CACGTC 2 cut(s) 672, 748
AjnI CCWGG 2 cut(s) 360, 500
AjuI GAANNNNNNNTTGG 2 cut(s) 722, 754
AloI GAACNNNNNNTCC 4 cut(s) 1014, 1046, 1223, 1255
AluBI AGCT 3 cut(s) 400, 514, 1137
AluI AGCT 3 cut(s) 400, 514, 1137
Alw21I GWGCWC 2 cut(s) 1079, 1139
Alw26I GTCTC 6 cut(s) 204, 213, 234, 412, 634, 1047
AlwI GGATC 5 cut(s) 171, 420, 482, 512, 1254
AlwNI CAGNNNCTG 1 cut(s) 1195
Ama87I CYCGRG 2 cut(s) 214, 1141
Aor51HI AGCGCT 1 cut(s) 1050
AoxI GGCC 7 cut(s) 460, 466, 529, 778, 877, 927, 977
ApaI GGGCCC 2 cut(s) 881, 931
ApeKI GCWGC 5 cut(s) 497, 562, 971, 1094, 1161
ApoI RAATTY 2 cut(s) 737, 1215
ArsI GACNNNNNNTTYG 4 cut(s) 139, 171, 1091, 1123
AspLEI GCGC 5 cut(s) 497, 842, 1051, 1123, 1175
AsuC2I CCSGG 6 cut(s) 215, 216, 607, 844, 881, 976
AsuHPI GGTGA 1 cut(s) 335
AvaI CYCGRG 2 cut(s) 214, 1141
AvaII GGWCC 5 cut(s) 439, 609, 899, 908, 1259
BaeGI GKGCMC 2 cut(s) 881, 931
BanI GGYRCC 4 cut(s) 182, 602, 839, 1120
BanII GRGCYC 5 cut(s) 309, 881, 931, 1039, 1139
BbsI GAAGAC 1 cut(s) 180
Bbv12I GWGCWC 2 cut(s) 1079, 1139
BbvCI CCTCAGC 1 cut(s) 1196
BbvI GCAGC 5 cut(s) 484, 549, 983, 1106, 1173
BccI CCATC 4 cut(s) 356, 593, 629, 868
BceAI ACGGC 3 cut(s) 611, 746, 1174
BcgI CGANNNNNNTGC 2 cut(s) 358, 392
BciT130I CCWGG 2 cut(s) 362, 502
BclI TGATCA 1 cut(s) 31
BcnI CCSGG 6 cut(s) 215, 216, 607, 844, 881, 976
BcoDI GTCTC 6 cut(s) 204, 213, 234, 412, 634, 1047
BfoI RGCGCY 3 cut(s) 843, 1052, 1124
BfuAI ACCTGC 1 cut(s) 500
Bme1390I CCNGG 8 cut(s) 215, 216, 362, 502, 607, 844, 881, 976
Bme18I GGWCC 5 cut(s) 439, 609, 899, 908, 1259
BmeRI GACNNNNNGTC 1 cut(s) 763
BmeT110I CYCGRG 2 cut(s) 214, 1141
BmgBI CACGTC 2 cut(s) 672, 748
BmrFI CCNGG 8 cut(s) 215, 216, 362, 502, 607, 844, 881, 976
BmrI ACTGGG 1 cut(s) 1276
BmsI GCATC 3 cut(s) 246, 360, 1182
BmuI ACTGGG 1 cut(s) 1276
BpiI GAAGAC 1 cut(s) 180
BplI GAGNNNNNCTC 2 cut(s) 671, 703
BpmI CTGGAG 2 cut(s) 344, 1029
Bpu10I CCTNAGC 1 cut(s) 1196
BpuEI CTTGAG 1 cut(s) 632
BpuMI CCSGG 6 cut(s) 215, 216, 607, 844, 881, 976
BsaHI GRCGYC 5 cut(s) 149, 759, 840, 947, 1121
BsaI GGTCTC 1 cut(s) 204
BsaJI CCNNGG 3 cut(s) 214, 435, 463
BsaWI WCCGGW 3 cut(s) 206, 787, 820
BsaXI ACNNNNNCTCC 8 cut(s) 231, 261, 537, 567, 1014, 1044, 1223, 1253
Bsc4I CCNNNNNNNGG 4 cut(s) 338, 558, 639, 787
Bse118I RCCGGY 3 cut(s) 468, 949, 1261
Bse1I ACTGG 1 cut(s) 1282
BseBI CCWGG 2 cut(s) 362, 502
BseDI CCNNGG 3 cut(s) 214, 435, 463
BseGI GGATG 2 cut(s) 665, 879
BseLI CCNNNNNNNGG 4 cut(s) 338, 558, 639, 787
BseMII CTCAG 3 cut(s) 208, 1187, 1202
BseNI ACTGG 1 cut(s) 1282
BseRI GAGGAG 6 cut(s) 317, 679, 1023, 1026, 1035, 1129
BseSI GKGCMC 2 cut(s) 881, 931
BseX3I CGGCCG 1 cut(s) 466
BseXI GCAGC 5 cut(s) 484, 549, 983, 1106, 1173
Bsh1236I CGCG 2 cut(s) 465, 1175
Bsh1285I CGRYCG 2 cut(s) 469, 678
BshFI GGCC 7 cut(s) 462, 468, 531, 780, 879, 929, 979
BshNI GGYRCC 4 cut(s) 182, 602, 839, 1120
BsiEI CGRYCG 2 cut(s) 469, 678
BsiHKAI GWGCWC 2 cut(s) 1079, 1139
BsiHKCI CYCGRG 2 cut(s) 214, 1141
BslFI GGGAC 4 cut(s) 622, 655, 780, 912
BslI CCNNNNNNNGG 4 cut(s) 338, 558, 639, 787
BsmAI GTCTC 6 cut(s) 204, 213, 234, 412, 634, 1047
BsmBI CGTCTC 4 cut(s) 234, 412, 634, 1047
BsmFI GGGAC 4 cut(s) 622, 655, 780, 912
BsmI GAATGC 1 cut(s) 360
BsnI GGCC 7 cut(s) 462, 468, 531, 780, 879, 929, 979
Bso31I GGTCTC 1 cut(s) 204
BsoBI CYCGRG 2 cut(s) 214, 1141
Bsp120I GGGCCC 2 cut(s) 877, 927
Bsp1286I GDGCHC 6 cut(s) 309, 881, 931, 1039, 1079, 1139
Bsp143I GATC 8 cut(s) 31, 163, 190, 425, 474, 504, 849, 1246
BspANI GGCC 7 cut(s) 462, 468, 531, 780, 879, 929, 979
BspCNI CTCAG 3 cut(s) 207, 1188, 1201
BspFNI CGCG 2 cut(s) 465, 1175
BspMI ACCTGC 1 cut(s) 500
BspPI GGATC 5 cut(s) 171, 420, 482, 512, 1254
BspT107I GGYRCC 4 cut(s) 182, 602, 839, 1120
BspTNI GGTCTC 1 cut(s) 204
BsrBI CCGCTC 1 cut(s) 803
BsrFI RCCGGY 3 cut(s) 468, 949, 1261
BsrI ACTGG 1 cut(s) 1282
BssAI RCCGGY 3 cut(s) 468, 949, 1261
BssECI CCNNGG 3 cut(s) 214, 435, 463
BssMI GATC 8 cut(s) 31, 163, 190, 425, 474, 504, 849, 1246
BssNI GRCGYC 5 cut(s) 149, 759, 840, 947, 1121
BssT1I CCWWGG 1 cut(s) 435
Bst2UI CCWGG 2 cut(s) 362, 502
Bst4CI ACNGT 5 cut(s) 245, 553, 613, 1081, 1154
Bst6I CTCTTC 1 cut(s) 1094
BstACI GRCGYC 5 cut(s) 149, 759, 840, 947, 1121
BstC8I GCNNGC 2 cut(s) 470, 582
BstDEI CTNAG 3 cut(s) 194, 1188, 1196
BstDSI CCRYGG 1 cut(s) 463
BstEII GGTNACC 1 cut(s) 341
BstF5I GGATG 2 cut(s) 665, 879
BstFNI CGCG 2 cut(s) 465, 1175
BstH2I RGCGCY 3 cut(s) 843, 1052, 1124
BstHHI GCGC 5 cut(s) 497, 842, 1051, 1123, 1175
BstKTI GATC 8 cut(s) 34, 166, 193, 428, 477, 507, 852, 1249
BstMAI GTCTC 6 cut(s) 204, 213, 234, 412, 634, 1047
BstMBI GATC 8 cut(s) 31, 163, 190, 425, 474, 504, 849, 1246
BstMCI CGRYCG 2 cut(s) 469, 678
BstMWI GCNNNNNNNGC 6 cut(s) 494, 581, 1094, 1143, 1167, 1170
BstNI CCWGG 2 cut(s) 362, 502
BstPI GGTNACC 1 cut(s) 341
BstSCI CCNGG 8 cut(s) 213, 214, 360, 500, 605, 842, 879, 974
BstSLI GKGCMC 2 cut(s) 881, 931
BstUI CGCG 2 cut(s) 465, 1175
BstV1I GCAGC 5 cut(s) 484, 549, 983, 1106, 1173
BstV2I GAAGAC 1 cut(s) 180
BstX2I RGATCY 1 cut(s) 504
BstYI RGATCY 1 cut(s) 504
BstZI CGGCCG 1 cut(s) 466
BsuRI GGCC 7 cut(s) 462, 468, 531, 780, 879, 929, 979
BtgI CCRYGG 1 cut(s) 463
BtgZI GCGATG 1 cut(s) 607
BtrI CACGTC 2 cut(s) 672, 748
BtsCI GGATG 2 cut(s) 665, 879
BtsI GCAGTG 1 cut(s) 837
BtsIMutI CAGTG 1 cut(s) 837
BveI ACCTGC 1 cut(s) 500
Cac8I GCNNGC 2 cut(s) 470, 582
CaiI CAGNNNCTG 1 cut(s) 1195
CfoI GCGC 5 cut(s) 497, 842, 1051, 1123, 1175
Cfr10I RCCGGY 3 cut(s) 468, 949, 1261
Cfr42I CCGCGG 1 cut(s) 466
Cfr9I CCCGGG 1 cut(s) 214
CseI GACGC 2 cut(s) 767, 955
Csp6I GTAC 2 cut(s) 395, 1071
CviAII CATG 5 cut(s) 382, 388, 742, 961, 1243
CviQI GTAC 2 cut(s) 395, 1071
DdeI CTNAG 3 cut(s) 194, 1188, 1196
DinI GGCGCC 2 cut(s) 841, 1122
DpnI GATC 8 cut(s) 33, 165, 192, 427, 476, 506, 851, 1248
DpnII GATC 8 cut(s) 31, 163, 190, 425, 474, 504, 849, 1246
DrdI GACNNNNNNGTC 1 cut(s) 906
DriI GACNNNNNGTC 1 cut(s) 763
DseDI GACNNNNNNGTC 1 cut(s) 906
EaeI YGGCCR 2 cut(s) 466, 529
EagI CGGCCG 1 cut(s) 466
Eam1104I CTCTTC 1 cut(s) 1094
Eam1105I GACNNNNNGTC 1 cut(s) 763
EarI CTCTTC 1 cut(s) 1094
EciI GGCGGA 1 cut(s) 487
Ecl136II GAGCTC 1 cut(s) 1137
EclXI CGGCCG 1 cut(s) 466
Eco130I CCWWGG 1 cut(s) 435
Eco24I GRGCYC 5 cut(s) 309, 881, 931, 1039, 1139
Eco31I GGTCTC 1 cut(s) 204
Eco47I GGWCC 5 cut(s) 439, 609, 899, 908, 1259
Eco47III AGCGCT 1 cut(s) 1050
Eco52I CGGCCG 1 cut(s) 466
Eco53kI GAGCTC 1 cut(s) 1137
Eco57I CTGAAG 1 cut(s) 317
Eco88I CYCGRG 2 cut(s) 214, 1141
Eco91I GGTNACC 1 cut(s) 341
EcoICRI GAGCTC 1 cut(s) 1137
EcoO109I RGGNCCY 2 cut(s) 899, 928
EcoO65I GGTNACC 1 cut(s) 341
EcoRI GAATTC 1 cut(s) 737
EcoRII CCWGG 2 cut(s) 360, 500
EcoT14I CCWWGG 1 cut(s) 435
EcoT38I GRGCYC 5 cut(s) 309, 881, 931, 1039, 1139
EgeI GGCGCC 2 cut(s) 841, 1122
EheI GGCGCC 2 cut(s) 841, 1122
ErhI CCWWGG 1 cut(s) 435
Esp3I CGTCTC 4 cut(s) 234, 412, 634, 1047
FaeI CATG 5 cut(s) 385, 391, 745, 964, 1246
FaiI YATR 9 cut(s) 231, 383, 389, 447, 743, 925, 962, 983, 1244
FaqI GGGAC 4 cut(s) 622, 655, 780, 912
FatI CATG 5 cut(s) 381, 387, 741, 960, 1242
FauI CCCGC 4 cut(s) 493, 625, 632, 889
FbaI TGATCA 1 cut(s) 31
FokI GGATG 2 cut(s) 652, 886
FriOI GRGCYC 5 cut(s) 309, 881, 931, 1039, 1139
GlaI GCGC 5 cut(s) 496, 841, 1050, 1122, 1174
GsuI CTGGAG 2 cut(s) 344, 1029
HaeII RGCGCY 3 cut(s) 843, 1052, 1124
HaeIII GGCC 7 cut(s) 462, 468, 531, 780, 879, 929, 979
HgaI GACGC 2 cut(s) 767, 955
HhaI GCGC 5 cut(s) 497, 842, 1051, 1123, 1175
Hin1I GRCGYC 5 cut(s) 149, 759, 840, 947, 1121
Hin1II CATG 5 cut(s) 385, 391, 745, 964, 1246
Hin6I GCGC 5 cut(s) 495, 840, 1049, 1121, 1173
HinP1I GCGC 5 cut(s) 495, 840, 1049, 1121, 1173
HincII GTYRAC 1 cut(s) 1110
HindII GTYRAC 1 cut(s) 1110
HinfI GANTC 3 cut(s) 130, 314, 1186
HphI GGTGA 1 cut(s) 335
Hpy166II GTNNAC 2 cut(s) 911, 1110
Hpy188I TCNGA 9 cut(s) 129, 190, 319, 353, 479, 541, 736, 939, 1191
Hpy188III TCNNGA 4 cut(s) 167, 649, 871, 1211
Hpy8I GTNNAC 2 cut(s) 911, 1110
Hpy99I CGWCG 9 cut(s) 154, 283, 426, 545, 638, 676, 778, 943, 1180
HpyAV CCTTC 4 cut(s) 110, 292, 735, 912
HpyCH4III ACNGT 5 cut(s) 245, 553, 613, 1081, 1154
HpyCH4IV ACGT 3 cut(s) 149, 671, 747
HpyCH4V TGCA 3 cut(s) 140, 259, 373
HpyF10VI GCNNNNNNNGC 6 cut(s) 494, 581, 1094, 1143, 1167, 1170
HpyF3I CTNAG 3 cut(s) 194, 1188, 1196
HpySE526I ACGT 3 cut(s) 149, 671, 747
Hsp92I GRCGYC 5 cut(s) 149, 759, 840, 947, 1121
Hsp92II CATG 5 cut(s) 385, 391, 745, 964, 1246
HspAI GCGC 5 cut(s) 495, 840, 1049, 1121, 1173
KasI GGCGCC 2 cut(s) 839, 1120
KroI GCCGGC 1 cut(s) 468
KroNI GCCGGC 1 cut(s) 470
Ksp22I TGATCA 1 cut(s) 31
KspI CCGCGG 1 cut(s) 466
Kzo9I GATC 8 cut(s) 31, 163, 190, 425, 474, 504, 849, 1246
LmnI GCTCC 9 cut(s) 304, 363, 790, 808, 968, 1013, 1042, 1085, 1142
Lsp1109I GCAGC 5 cut(s) 484, 549, 983, 1106, 1173
LweI GCATC 3 cut(s) 246, 360, 1182
MaeII ACGT 3 cut(s) 149, 671, 747
MaeIII GTNAC 2 cut(s) 341, 1154
MalI GATC 8 cut(s) 33, 165, 192, 427, 476, 506, 851, 1248
MbiI CCGCTC 1 cut(s) 803
MboI GATC 8 cut(s) 31, 163, 190, 425, 474, 504, 849, 1246
MboII GAAGA 5 cut(s) 116, 185, 284, 499, 1111
MflI RGATCY 1 cut(s) 504
MhlI GDGCHC 6 cut(s) 309, 881, 931, 1039, 1079, 1139
MluCI AATT 4 cut(s) 81, 730, 737, 1215
Mly113I GGCGCC 2 cut(s) 840, 1121
MlyI GAGTC 2 cut(s) 308, 1180
MmeI TCCRAC 4 cut(s) 342, 564, 962, 1237
MroNI GCCGGC 1 cut(s) 468
MseI TTAA 1 cut(s) 957
MslI CAYNNNNRTG 3 cut(s) 353, 386, 746
MspA1I CMGCKG 4 cut(s) 465, 514, 1005, 1164
MspR9I CCNGG 8 cut(s) 215, 216, 362, 502, 607, 844, 881, 976
Mva1269I GAATGC 1 cut(s) 360
MvaI CCWGG 2 cut(s) 362, 502
MvnI CGCG 2 cut(s) 465, 1175
MwoI GCNNNNNNNGC 6 cut(s) 494, 581, 1094, 1143, 1167, 1170
NaeI GCCGGC 1 cut(s) 470
NarI GGCGCC 2 cut(s) 840, 1121
NciI CCSGG 6 cut(s) 215, 216, 607, 844, 881, 976
NdeII GATC 8 cut(s) 31, 163, 190, 425, 474, 504, 849, 1246
NgoMIV GCCGGC 1 cut(s) 468
NlaIII CATG 5 cut(s) 385, 391, 745, 964, 1246
NmeAIII GCCGAG 5 cut(s) 43, 507, 601, 1040, 1152
NmuCI GTSAC 1 cut(s) 341
PaeR7I CTCGAG 1 cut(s) 1141
PcsI WCGNNNNNNNCGW 4 cut(s) 549, 573, 630, 1085
PctI GAATGC 1 cut(s) 360
PdiI GCCGGC 1 cut(s) 470
PfeI GAWTC 1 cut(s) 130
PflFI GACNNNGTC 1 cut(s) 245
PfoI TCCNGGA 1 cut(s) 360
PleI GAGTC 2 cut(s) 308, 1180
PluTI GGCGCC 2 cut(s) 843, 1124
PpsI GAGTC 2 cut(s) 308, 1180
PpuMI RGGWCCY 1 cut(s) 899
Psp124BI GAGCTC 1 cut(s) 1139
Psp5II RGGWCCY 1 cut(s) 899
Psp6I CCWGG 2 cut(s) 360, 500
PspEI GGTNACC 1 cut(s) 341
PspGI CCWGG 2 cut(s) 360, 500
PspOMI GGGCCC 2 cut(s) 877, 927
PspPPI RGGWCCY 1 cut(s) 899
PspXI VCTCGAGB 1 cut(s) 1141
PstNI CAGNNNCTG 1 cut(s) 1195
PsuI RGATCY 1 cut(s) 504
PsyI GACNNNGTC 1 cut(s) 245
PvuII CAGCTG 1 cut(s) 514
RsaI GTAC 2 cut(s) 396, 1072
RsaNI GTAC 2 cut(s) 395, 1071
RseI CAYNNNNRTG 3 cut(s) 353, 386, 746
SacI GAGCTC 1 cut(s) 1139
SacII CCGCGG 1 cut(s) 466
SaqAI TTAA 1 cut(s) 957
Sau3AI GATC 8 cut(s) 31, 163, 190, 425, 474, 504, 849, 1246
SchI GAGTC 2 cut(s) 308, 1180
ScrFI CCNGG 8 cut(s) 215, 216, 362, 502, 607, 844, 881, 976
SduI GDGCHC 6 cut(s) 309, 881, 931, 1039, 1079, 1139
SfaNI GCATC 3 cut(s) 246, 360, 1182
SfoI GGCGCC 2 cut(s) 841, 1122
Sfr274I CTCGAG 1 cut(s) 1141
Sfr303I CCGCGG 1 cut(s) 466
SgrBI CCGCGG 1 cut(s) 466
SinI GGWCC 5 cut(s) 439, 609, 899, 908, 1259
SlaI CTCGAG 1 cut(s) 1141
SmaI CCCGGG 1 cut(s) 216
SmiMI CAYNNNNRTG 3 cut(s) 353, 386, 746
SmlI CTYRAG 2 cut(s) 647, 1141
SmoI CTYRAG 2 cut(s) 647, 1141
Sse9I AATT 4 cut(s) 81, 730, 737, 1215
SspDI GGCGCC 2 cut(s) 839, 1120
SspI AATATT 1 cut(s) 113
SstI GAGCTC 1 cut(s) 1139
StyD4I CCNGG 8 cut(s) 213, 214, 360, 500, 605, 842, 879, 974
StyI CCWWGG 1 cut(s) 435
TaaI ACNGT 5 cut(s) 245, 553, 613, 1081, 1154
TaiI ACGT 3 cut(s) 152, 674, 750
TaqI TCGA 7 cut(s) 103, 254, 567, 678, 986, 1055, 1142
TaqII GACCGA 1 cut(s) 664
TasI AATT 4 cut(s) 81, 730, 737, 1215
TauI GCSGC 7 cut(s) 337, 465, 468, 840, 1067, 1126, 1173
TfiI GAWTC 1 cut(s) 130
Tru1I TTAA 1 cut(s) 957
Tru9I TTAA 1 cut(s) 957
TscAI CASTG 1 cut(s) 837
TseFI GTSAC 1 cut(s) 341
TseI GCWGC 5 cut(s) 497, 562, 971, 1094, 1161
Tsp45I GTSAC 1 cut(s) 341
TspDTI ATGAA 2 cut(s) 730, 1231
TspGWI ACGGA 9 cut(s) 108, 192, 252, 296, 382, 545, 558, 622, 1029
TspMI CCCGGG 1 cut(s) 214
TspRI CASTG 1 cut(s) 837
Tth111I GACNNNGTC 1 cut(s) 245
VpaK11BI GGWCC 5 cut(s) 439, 609, 899, 908, 1259
XapI RAATTY 2 cut(s) 737, 1215
XhoI CTCGAG 1 cut(s) 1141
XmaI CCCGGG 1 cut(s) 214
ZraI GACGTC 1 cut(s) 150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.