Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0009236

Physical Location & Seq

Genomic Coordinates Reverse (-)

17887982 .. 17894129

Gene Structure 6148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g15080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGCATGGTTTAATAGGGAGAAGGGTATTCTCGGGAAGTGCAAAATCCCTGCGGTGGCAACAACAACGCTGCTTCTCTAAGGTGGCTCAAAGGGAGGAAGCCCTTCTCCAAGACAATGGCGTCGATGGTCTCAAAATGCCCCCCTGCGATTACACCCCTCCGCCGTACACCGGCCCTACCGCCGACGAGATCCTTGCCCAGCGCAAGAAGTATCTTAGCCCCTCCATGCCCTACTTCTACGACAAACCCCTGAACATTGTGGACGGGAAGAGGCAGTACTTGTTCGACGAGAAGGGGCGGAGGTATTTGGACGGATTCGGGGGGATTGCGACGGTGAGCTGCGGCCACTGCCATCCGGACGTGGTGGAGGCCATAGTCAACCAAACCAAGCGCATACAACACTCCACCATCCTCTACCTCAACCACGCTATCGGCGACTTCGCTCAGGCGCTCGCTAACAAGTTGCCCGGCAATCTCAAGGTGGTGTTTTTTACAAACTCGGGGACAGAGGCAAACGAGTTGGCAATGCTGATTGCGCGGTTGTACACTGGATGTCACGATATAATCTCGCTGAGGAATGCATATCATGGCAACGGTGCTGGCACCATGGGAGCCACTGCCCAAGCCAACTGGAAATTCAACGTCATACAGAGTGGAGTTCATCACGCCGTAAATCCGGATCCATACAGAGGAGTTTTTGGTTCAGATGGAGAGAAATATGCCAAAGATGTCCAAGATCTCATAGACTTCGGAACCTCAGGCCATGTTGCTGGTTTTTTATGTGAGGCTATCCAGGGAGTAGGAGGAATTGTAGAACTAGCTCCAGGTTACTTACCAGCCGTTTATAATAGCGTGAAGAAAGCTGGAGGACTTTTCATTGCTGATGAAGTCCAATCTGGTTTCGCTCGGACGGGGAGCAACTTCTGGGGATTTGAGGGCCACGGTGTTGTGCCTGACATTGTGACAATGGCAAAGGGAATTGGAAATGGCATCCCCCTTGGTGCTGTGGTAACCACTTCTGAGGTTGCAGAGGTCCTAACTCGCCGCAATTACTTCAACACCTTCGGTGGTAATCCAGTGTGTACAGCTGCAGGACTGGCGGTTCTAAACGTGATTGAGAAAGAAAAACTGCAGGAGAATGCGTTGCTCGTGGGATCGTATCTGAAGGAAAGACTCAATGCTCTTAAGGATAAATATGAACTTATTGGCGATGTGAGGGGAAGGGGATTCATGCTCGGAGTTGAACTTGTTACTGATCGTGAGCTGAAGACACCTGCAAAGGCTGAAACCATACACGTAATGGACAAGATGAAAGATTTGGGAGTTTTGATCGGCAAAGGTGGCTTCTACGGAAATGTTTTCAGAATCACACCTCCCCTATGCTTCACCAAGGAAGATGCAGATTTTCTTGTGGATGCAATGGACTACACGATCTCGAAAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0007154 GO:0008144 GO:0008150 GO:0008453 GO:0008483 GO:0009605 GO:0009987 GO:0009991 GO:0016740 GO:0016769 GO:0019842 GO:0030170 GO:0031667 GO:0031668 GO:0031669 GO:0036094 GO:0042802 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043562 GO:0044424 GO:0044444 GO:0044464 GO:0048037 GO:0050662 GO:0050896 GO:0051716 GO:0070279 GO:0071496 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00250 ko00260 ko00270 ko00280 ko01100 ko01110 map00250 map00260 map00270 map00280 map01100 map01110

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

482

Amino Acids

52.36

Weight (kDa)

7.17

Isoelectric Point (pI)

29.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_3	PF00202	84 - 475	2.1e-94	Aminotransferase class-III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009236)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38400 AT2G38400 AT3G08860 AT3G08860
fragaria_vesca	FvH4_6g10440
malus_domestica	MD04G1170100.v1.1 MD12G1184100.v1.1
prunus_persica	Prupe.6G288600_v2.0.a1 Prupe.6G288600_v2.0.a1
pyrus_communis	pycom04g15080 pycom12g17280
rosa_chinensis	RchiOBHm_Chr3g0461351
rosa_laevigata	RLG00000024939
rosa_multiflora	Rmu_sc0002677.1_g000025
rosa_roxburghii	Rroxscaffold_6G00418390 Rroxscaffold_6G00418680
rosa_rugosa	Rorug03G0049400
rosa_samantha	Rh3AG107600 Rh3BG111600 Rh3CG113400 Rh3DG113400
rosa_wichuraiana	Rw3G009180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	846
AarI	CACCTGC	1 cut(s)	1282
AasI	GACNNNNNNGTC	1 cut(s)	119
Acc36I	ACCTGC	1 cut(s)	1282
AccB1I	GGYRCC	1 cut(s)	602
AccII	CGCG	1 cut(s)	538
AccIII	TCCGGA	2 cut(s)	355, 676
AciI	CCGC	8 cut(s)	52, 161, 180, 298, 342, 538, 1045, 1100
AclWI	GGATC	4 cut(s)	184, 674, 687, 1162
AcoI	YGGCCR	1 cut(s)	343
AcsI	RAATTY	2 cut(s)	635, 1440
AcuI	CTGAAG	2 cut(s)	1184, 1286
AcyI	GRCGYC	1 cut(s)	120
AfaI	GTAC	4 cut(s)	167, 278, 545, 1084
AfiI	CCNNNNNNNGG	3 cut(s)	54, 170, 689
AflII	CTTAAG	1 cut(s)	1184
AflIII	ACRYGT	1 cut(s)	1294
AgsI	TTSAA	3 cut(s)	640, 1057, 1244
AjiI	CACGTC	1 cut(s)	361
AjnI	CCWGG	2 cut(s)	792, 823
AjuI	GAANNNNNNNTTGG	2 cut(s)	620, 652
AloI	GAACNNNNNNTCC	2 cut(s)	1086, 1118
AluBI	AGCT	5 cut(s)	339, 821, 863, 1088, 1264
AluI	AGCT	5 cut(s)	339, 821, 863, 1088, 1264
Alw26I	GTCTC	1 cut(s)	134
AlwI	GGATC	4 cut(s)	184, 674, 687, 1162
Ama87I	CYCGRG	2 cut(s)	31, 499
Aor13HI	TCCGGA	2 cut(s)	355, 676
AoxI	GGCC	5 cut(s)	172, 343, 369, 760, 937
ApeKI	GCWGC	3 cut(s)	69, 339, 1088
ApoI	RAATTY	2 cut(s)	635, 1440
Asp700I	GAANNNNTTC	1 cut(s)	102
AspLEI	GCGC	4 cut(s)	204, 393, 451, 538
AspS9I	GGNCC	3 cut(s)	173, 937, 1033
AsuC2I	CCSGG	1 cut(s)	468
AsuHPI	GGTGA	2 cut(s)	346, 1378
AvaI	CYCGRG	2 cut(s)	31, 499
AvaII	GGWCC	1 cut(s)	1033
AxyI	CCTNAGG	1 cut(s)	757
BamHI	GGATCC	1 cut(s)	679
BanI	GGYRCC	1 cut(s)	602
BarI	GAAGNNNNNNTAC	2 cut(s)	260, 292
BauI	CACGAG	1 cut(s)	1148
BbsI	GAAGAC	1 cut(s)	1274
BbvCI	CCTCAGC	1 cut(s)	572
BbvI	GCAGC	3 cut(s)	56, 326, 1075
BccI	CCATC	4 cut(s)	119, 360, 416, 701
BceAI	ACGGC	3 cut(s)	148, 653, 824
BcgI	CGANNNNNNTGC	2 cut(s)	176, 210
BciT130I	CCWGG	2 cut(s)	794, 825
BcnI	CCSGG	1 cut(s)	468
BcoDI	GTCTC	1 cut(s)	134
BfaI	CTAG	1 cut(s)	818
BfmI	CTRYAG	2 cut(s)	1089, 1130
BfoI	RGCGCY	1 cut(s)	452
BfrI	CTTAAG	1 cut(s)	1184
BfuAI	ACCTGC	1 cut(s)	1282
BglII	AGATCT	1 cut(s)	736
BisI	GCNGC	5 cut(s)	70, 340, 343, 1045, 1089
BlsI	GCNGC	5 cut(s)	71, 341, 344, 1046, 1090
BmcAI	AGTACT	1 cut(s)	278
Bme1390I	CCNGG	3 cut(s)	468, 794, 825
Bme18I	GGWCC	1 cut(s)	1033
BmeT110I	CYCGRG	2 cut(s)	31, 499
BmgBI	CACGTC	1 cut(s)	361
BmgT120I	GGNCC	3 cut(s)	173, 937, 1033
BmiI	GGNNCC	4 cut(s)	604, 613, 681, 754
BmrFI	CCNGG	3 cut(s)	468, 794, 825
BmsI	GCATC	3 cut(s)	999, 1387, 1405
BpiI	GAAGAC	1 cut(s)	1274
BpmI	CTGGAG	2 cut(s)	807, 885
Bpu10I	CCTNAGC	2 cut(s)	444, 572
BpuEI	CTTGAG	1 cut(s)	461
BpuMI	CCSGG	1 cut(s)	468
BsaAI	YACGTR	1 cut(s)	1297
BsaHI	GRCGYC	1 cut(s)	120
BsaI	GGTCTC	1 cut(s)	134
BsaJI	CCNNGG	5 cut(s)	606, 793, 940, 997, 1389
BsaWI	WCCGGW	2 cut(s)	355, 676
BsaXI	ACNNNNNCTCC	4 cut(s)	795, 825, 1127, 1157
Bsc4I	CCNNNNNNNGG	3 cut(s)	54, 170, 689
Bse118I	RCCGGY	1 cut(s)	170
Bse1I	ACTGG	4 cut(s)	553, 635, 1076, 1101
Bse21I	CCTNAGG	1 cut(s)	757
Bse3DI	GCAATG	3 cut(s)	531, 876, 1425
BseAI	TCCGGA	2 cut(s)	355, 676
BseBI	CCWGG	2 cut(s)	794, 825
BseDI	CCNNGG	5 cut(s)	606, 793, 940, 997, 1389
BseGI	GGATG	5 cut(s)	352, 408, 557, 990, 1420
BseLI	CCNNNNNNNGG	3 cut(s)	54, 170, 689
BseMI	GCAATG	3 cut(s)	531, 876, 1425
BseMII	CTCAG	4 cut(s)	458, 563, 771, 1011
BseNI	ACTGG	4 cut(s)	553, 635, 1076, 1101
BseRI	GAGGAG	1 cut(s)	705
BseXI	GCAGC	3 cut(s)	56, 326, 1075
BseYI	CCCAGC	1 cut(s)	198
Bsh1236I	CGCG	1 cut(s)	538
BshFI	GGCC	5 cut(s)	174, 345, 371, 762, 939
BshNI	GGYRCC	1 cut(s)	602
BsiHKCI	CYCGRG	2 cut(s)	31, 499
BsiSI	CCGG	4 cut(s)	171, 356, 468, 677
BslFI	GGGAC	1 cut(s)	517
BslI	CCNNNNNNNGG	3 cut(s)	54, 170, 689
BsmAI	GTCTC	1 cut(s)	134
BsmFI	GGGAC	1 cut(s)	517
BsmI	GAATGC	2 cut(s)	583, 1144
BsnI	GGCC	5 cut(s)	174, 345, 371, 762, 939
Bso31I	GGTCTC	1 cut(s)	134
BsoBI	CYCGRG	2 cut(s)	31, 499
Bsp13I	TCCGGA	2 cut(s)	355, 676
Bsp1407I	TGTACA	2 cut(s)	543, 1082
Bsp143I	GATC	7 cut(s)	189, 679, 736, 1154, 1255, 1329, 1431
Bsp19I	CCATGG	1 cut(s)	606
BspACI	CCGC	8 cut(s)	52, 161, 180, 298, 342, 538, 1045, 1100
BspANI	GGCC	5 cut(s)	174, 345, 371, 762, 939
BspCNI	CTCAG	4 cut(s)	457, 564, 770, 1012
BspEI	TCCGGA	2 cut(s)	355, 676
BspFNI	CGCG	1 cut(s)	538
BspLI	GGNNCC	4 cut(s)	604, 613, 681, 754
BspMAI	CTGCAG	2 cut(s)	1093, 1134
BspMI	ACCTGC	1 cut(s)	1282
BspPI	GGATC	4 cut(s)	184, 674, 687, 1162
BspT107I	GGYRCC	1 cut(s)	602
BspTI	CTTAAG	1 cut(s)	1184
BspTNI	GGTCTC	1 cut(s)	134
BsrDI	GCAATG	3 cut(s)	531, 876, 1425
BsrFI	RCCGGY	1 cut(s)	170
BsrGI	TGTACA	2 cut(s)	543, 1082
BsrI	ACTGG	4 cut(s)	553, 635, 1076, 1101
BssAI	RCCGGY	1 cut(s)	170
BssECI	CCNNGG	5 cut(s)	606, 793, 940, 997, 1389
BssMI	GATC	7 cut(s)	189, 679, 736, 1154, 1255, 1329, 1431
BssNI	GRCGYC	1 cut(s)	120
BssSI	CACGAG	1 cut(s)	1148
BssT1I	CCWWGG	3 cut(s)	606, 997, 1389
Bst2BI	CACGAG	1 cut(s)	1148
Bst2UI	CCWGG	2 cut(s)	794, 825
Bst4CI	ACNGT	3 cut(s)	334, 596, 944
Bst6I	CTCTTC	1 cut(s)	263
BstACI	GRCGYC	1 cut(s)	120
BstAFI	CTTAAG	1 cut(s)	1184
BstAUI	TGTACA	2 cut(s)	543, 1082
BstBAI	YACGTR	1 cut(s)	1297
BstC8I	GCNNGC	2 cut(s)	453, 601
BstDEI	CTNAG	6 cut(s)	78, 215, 444, 572, 757, 1020
BstDSI	CCRYGG	2 cut(s)	606, 940
BstEII	GGTNACC	1 cut(s)	1009
BstF5I	GGATG	5 cut(s)	352, 408, 557, 990, 1420
BstFNI	CGCG	1 cut(s)	538
BstH2I	RGCGCY	1 cut(s)	452
BstHHI	GCGC	4 cut(s)	204, 393, 451, 538
BstKTI	GATC	7 cut(s)	192, 682, 739, 1157, 1258, 1332, 1434
BstMAI	GTCTC	1 cut(s)	134
BstMBI	GATC	7 cut(s)	189, 679, 736, 1154, 1255, 1329, 1431
BstMWI	GCNNNNNNNGC	4 cut(s)	348, 535, 1097, 1341
BstNI	CCWGG	2 cut(s)	794, 825
BstPI	GGTNACC	1 cut(s)	1009
BstSCI	CCNGG	3 cut(s)	466, 792, 823
BstSFI	CTRYAG	2 cut(s)	1089, 1130
BstUI	CGCG	1 cut(s)	538
BstV1I	GCAGC	3 cut(s)	56, 326, 1075
BstV2I	GAAGAC	1 cut(s)	1274
BstX2I	RGATCY	3 cut(s)	189, 679, 736
BstXI	CCANNNNNNTGG	2 cut(s)	116, 770
BstYI	RGATCY	3 cut(s)	189, 679, 736
Bsu36I	CCTNAGG	1 cut(s)	757
BsuRI	GGCC	5 cut(s)	174, 345, 371, 762, 939
BtgI	CCRYGG	2 cut(s)	606, 940
BtgZI	GCGATG	1 cut(s)	1224
BtrI	CACGTC	1 cut(s)	361
BtsCI	GGATG	5 cut(s)	352, 408, 557, 990, 1420
BtsI	GCAGTG	2 cut(s)	346, 615
BtsIMutI	CAGTG	4 cut(s)	346, 546, 615, 1083
BveI	ACCTGC	1 cut(s)	1282
Cac8I	GCNNGC	2 cut(s)	453, 601
CfoI	GCGC	4 cut(s)	204, 393, 451, 538
Cfr10I	RCCGGY	1 cut(s)	170
Cfr13I	GGNCC	3 cut(s)	173, 937, 1033
CseI	GACGC	1 cut(s)	109
Csp6I	GTAC	4 cut(s)	166, 277, 544, 1083
CviAII	CATG	6 cut(s)	5, 226, 587, 607, 764, 1231
CviQI	GTAC	4 cut(s)	166, 277, 544, 1083
DdeI	CTNAG	6 cut(s)	78, 215, 444, 572, 757, 1020
DpnI	GATC	7 cut(s)	191, 681, 738, 1156, 1257, 1331, 1433
DpnII	GATC	7 cut(s)	189, 679, 736, 1154, 1255, 1329, 1431
DrdI	GACNNNNNNGTC	1 cut(s)	119
DseDI	GACNNNNNNGTC	1 cut(s)	119
EaeI	YGGCCR	1 cut(s)	343
Eam1104I	CTCTTC	1 cut(s)	263
EarI	CTCTTC	1 cut(s)	263
EciI	GGCGGA	2 cut(s)	150, 313
Eco130I	CCWWGG	3 cut(s)	606, 997, 1389
Eco31I	GGTCTC	1 cut(s)	134
Eco47I	GGWCC	1 cut(s)	1033
Eco57I	CTGAAG	2 cut(s)	1184, 1286
Eco81I	CCTNAGG	1 cut(s)	757
Eco88I	CYCGRG	2 cut(s)	31, 499
Eco91I	GGTNACC	1 cut(s)	1009
EcoO109I	RGGNCCY	1 cut(s)	1033
EcoO65I	GGTNACC	1 cut(s)	1009
EcoRII	CCWGG	2 cut(s)	792, 823
EcoT14I	CCWWGG	3 cut(s)	606, 997, 1389
EcoT22I	ATGCAT	2 cut(s)	6, 583
ErhI	CCWWGG	3 cut(s)	606, 997, 1389
FaeI	CATG	6 cut(s)	8, 229, 590, 610, 767, 1234
FaqI	GGGAC	1 cut(s)	517
FatI	CATG	6 cut(s)	4, 225, 586, 606, 763, 1230
Fnu4HI	GCNGC	5 cut(s)	70, 340, 343, 1045, 1089
FokI	GGATG	5 cut(s)	339, 395, 564, 977, 1427
Fsp4HI	GCNGC	5 cut(s)	70, 340, 343, 1045, 1089
FspBI	CTAG	1 cut(s)	818
GlaI	GCGC	4 cut(s)	203, 392, 450, 537
GluI	GCNGC	5 cut(s)	70, 340, 343, 1045, 1089
GsaI	CCCAGC	1 cut(s)	202
GsuI	CTGGAG	2 cut(s)	807, 885
HaeII	RGCGCY	1 cut(s)	452
HaeIII	GGCC	5 cut(s)	174, 345, 371, 762, 939
HapII	CCGG	4 cut(s)	171, 356, 468, 677
HgaI	GACGC	1 cut(s)	109
HhaI	GCGC	4 cut(s)	204, 393, 451, 538
Hin1I	GRCGYC	1 cut(s)	120
Hin1II	CATG	6 cut(s)	8, 229, 590, 610, 767, 1234
Hin6I	GCGC	4 cut(s)	202, 391, 449, 536
HinP1I	GCGC	4 cut(s)	202, 391, 449, 536
HincII	GTYRAC	1 cut(s)	379
HindII	GTYRAC	1 cut(s)	379
HinfI	GANTC	4 cut(s)	315, 1173, 1227, 1365
HpaII	CCGG	4 cut(s)	171, 356, 468, 677
HphI	GGTGA	2 cut(s)	346, 1378
Hpy166II	GTNNAC	5 cut(s)	168, 262, 379, 546, 1083
Hpy188I	TCNGA	7 cut(s)	706, 752, 909, 1021, 1164, 1238, 1364
Hpy188III	TCNNGA	6 cut(s)	33, 356, 557, 677, 1259, 1435
Hpy8I	GTNNAC	5 cut(s)	168, 262, 379, 546, 1083
Hpy99I	CGWCG	4 cut(s)	125, 188, 290, 334
HpyAV	CCTTC	6 cut(s)	15, 113, 286, 1072, 1159, 1215
HpyCH4III	ACNGT	3 cut(s)	334, 596, 944
HpyCH4IV	ACGT	4 cut(s)	360, 642, 1110, 1296
HpyCH4V	TGCA	9 cut(s)	4, 41, 581, 1028, 1091, 1132, 1277, 1400, 1418
HpyF10VI	GCNNNNNNNGC	4 cut(s)	348, 535, 1097, 1341
HpyF3I	CTNAG	6 cut(s)	78, 215, 444, 572, 757, 1020
HpySE526I	ACGT	4 cut(s)	360, 642, 1110, 1296
Hsp92I	GRCGYC	1 cut(s)	120
Hsp92II	CATG	6 cut(s)	8, 229, 590, 610, 767, 1234
HspAI	GCGC	4 cut(s)	202, 391, 449, 536
Kpn2I	TCCGGA	2 cut(s)	355, 676
Kzo9I	GATC	7 cut(s)	189, 679, 736, 1154, 1255, 1329, 1431
LmnI	GCTCC	3 cut(s)	611, 826, 915
Lsp1109I	GCAGC	3 cut(s)	56, 326, 1075
LweI	GCATC	3 cut(s)	999, 1387, 1405
MaeI	CTAG	1 cut(s)	818
MaeII	ACGT	4 cut(s)	360, 642, 1110, 1296
MaeIII	GTNAC	5 cut(s)	554, 827, 961, 1009, 1249
MalI	GATC	7 cut(s)	191, 681, 738, 1156, 1257, 1331, 1433
MboI	GATC	7 cut(s)	189, 679, 736, 1154, 1255, 1329, 1431
MboII	GAAGA	4 cut(s)	280, 868, 1279, 1406
MflI	RGATCY	3 cut(s)	189, 679, 736
MluCI	AATT	5 cut(s)	635, 807, 978, 1048, 1440
MlyI	GAGTC	1 cut(s)	1167
Mph1103I	ATGCAT	2 cut(s)	6, 583
MroI	TCCGGA	2 cut(s)	355, 676
MroXI	GAANNNNTTC	1 cut(s)	102
MseI	TTAA	2 cut(s)	11, 1185
MspA1I	CMGCKG	1 cut(s)	1088
MspCI	CTTAAG	1 cut(s)	1184
MspI	CCGG	4 cut(s)	171, 356, 468, 677
MspR9I	CCNGG	3 cut(s)	468, 794, 825
Mva1269I	GAATGC	2 cut(s)	583, 1144
MvaI	CCWGG	2 cut(s)	794, 825
MvnI	CGCG	1 cut(s)	538
MwoI	GCNNNNNNNGC	4 cut(s)	348, 535, 1097, 1341
NciI	CCSGG	1 cut(s)	468
NcoI	CCATGG	1 cut(s)	606
NdeII	GATC	7 cut(s)	189, 679, 736, 1154, 1255, 1329, 1431
NlaIII	CATG	6 cut(s)	8, 229, 590, 610, 767, 1234
NlaIV	GGNNCC	4 cut(s)	604, 613, 681, 754
NmuCI	GTSAC	2 cut(s)	554, 961
NsiI	ATGCAT	2 cut(s)	6, 583
PaqCI	CACCTGC	1 cut(s)	1282
PcsI	WCGNNNNNNNCGW	1 cut(s)	432
PctI	GAATGC	2 cut(s)	583, 1144
PdmI	GAANNNNTTC	1 cut(s)	102
PfeI	GAWTC	3 cut(s)	315, 1227, 1365
PkrI	GCNGC	5 cut(s)	71, 341, 344, 1046, 1090
PleI	GAGTC	1 cut(s)	1167
PpsI	GAGTC	1 cut(s)	1167
Ppu21I	YACGTR	1 cut(s)	1297
PpuMI	RGGWCCY	1 cut(s)	1033
PsiI	TTATAA	1 cut(s)	846
Psp5II	RGGWCCY	1 cut(s)	1033
Psp6I	CCWGG	2 cut(s)	792, 823
PspEI	GGTNACC	1 cut(s)	1009
PspFI	CCCAGC	1 cut(s)	198
PspGI	CCWGG	2 cut(s)	792, 823
PspN4I	GGNNCC	4 cut(s)	604, 613, 681, 754
PspPI	GGNCC	3 cut(s)	173, 937, 1033
PspPPI	RGGWCCY	1 cut(s)	1033
PstI	CTGCAG	2 cut(s)	1093, 1134
PsuI	RGATCY	3 cut(s)	189, 679, 736
PvuII	CAGCTG	1 cut(s)	1088
RsaI	GTAC	4 cut(s)	167, 278, 545, 1084
RsaNI	GTAC	4 cut(s)	166, 277, 544, 1083
SaqAI	TTAA	2 cut(s)	11, 1185
SatI	GCNGC	5 cut(s)	70, 340, 343, 1045, 1089
Sau3AI	GATC	7 cut(s)	189, 679, 736, 1154, 1255, 1329, 1431
Sau96I	GGNCC	3 cut(s)	173, 937, 1033
ScaI	AGTACT	1 cut(s)	278
SchI	GAGTC	1 cut(s)	1167
ScrFI	CCNGG	3 cut(s)	468, 794, 825
SfaNI	GCATC	3 cut(s)	999, 1387, 1405
SfcI	CTRYAG	2 cut(s)	1089, 1130
SinI	GGWCC	1 cut(s)	1033
SmlI	CTYRAG	2 cut(s)	476, 1184
SmoI	CTYRAG	2 cut(s)	476, 1184
Sse9I	AATT	5 cut(s)	635, 807, 978, 1048, 1440
SsiI	CCGC	8 cut(s)	52, 161, 180, 298, 342, 538, 1045, 1100
SspMI	CTAG	1 cut(s)	818
StyD4I	CCNGG	3 cut(s)	466, 792, 823
StyI	CCWWGG	3 cut(s)	606, 997, 1389
TaaI	ACNGT	3 cut(s)	334, 596, 944
TaiI	ACGT	4 cut(s)	363, 645, 1113, 1299
TaqI	TCGA	3 cut(s)	123, 285, 1436
TasI	AATT	5 cut(s)	635, 807, 978, 1048, 1440
TatI	WGTACW	3 cut(s)	276, 543, 1082
TauI	GCSGC	2 cut(s)	345, 1047
TfiI	GAWTC	3 cut(s)	315, 1227, 1365
Tru1I	TTAA	2 cut(s)	11, 1185
Tru9I	TTAA	2 cut(s)	11, 1185
TscAI	CASTG	4 cut(s)	353, 553, 622, 1083
TseFI	GTSAC	2 cut(s)	554, 961
TseI	GCWGC	3 cut(s)	69, 339, 1088
Tsp45I	GTSAC	2 cut(s)	554, 961
TspDTI	ATGAA	6 cut(s)	650, 865, 900, 1212, 1219, 1325
TspGWI	ACGGA	2 cut(s)	327, 1365
TspRI	CASTG	4 cut(s)	353, 553, 622, 1083
Vha464I	CTTAAG	1 cut(s)	1184
VpaK11BI	GGWCC	1 cut(s)	1033
XapI	RAATTY	2 cut(s)	635, 1440
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1297
XmnI	GAANNNNTTC	1 cut(s)	102
XspI	CTAG	1 cut(s)	818
ZrmI	AGTACT	1 cut(s)	278
Zsp2I	ATGCAT	2 cut(s)	6, 583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.