pycom04g17160

Pyrophosphate-energized vacuolar membrane proton pump

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
19663220 .. 19665023
1804 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g17160.4

Sequence Viewer

Length: 1188 bp
ATGACTGCTGGGATCGCCGCTGTCACTTTTGTATCCTTGCCTTCAGAATTCACTCTCTTCAGCTTTGGAACCAATAAGGCTGTCAAAAACTGGTACCTCTTCTTTTGTGTATCAATTGGATTGTGGGCTGGTCTTGTTATTGGATACACTACAGAGTATTACACTAGCAATGCTTACAGTCCGGTGCAGGATGTGGCAGATTCATGCAGGACTGGTGCTGCAACAAACGTGATTTTCGGGCTGGCTCTTGGTTACAAATCAGTCATCATTCCTGTGTTCGCCATTGCGTTTGCTATCTACGTTAGCTTTAGCTTGGCTGCCATGTATGGAATTGCTGTGGCTGCTTTGGGAATGCTCAGCACTATCTCCACAGGTCTTGCAATTGATGCTTATGGCCCCATAAGCGACAATGCTGGTGGGATTGCAGAGATGGCCGGGATGAGCCACAAGATACGCGAAAGAACAGATGCTTTAGATGCTGCAGGAAACACAACTGCTGCTATTGGCAAGGGTTTTGCTATTGGATCAGCTGCTCTTGTTTCTCTTGCATTGTTTGGCGCCTATGTCAGCAGAGCGGGAATAGAGACCGTTGATGTGTTGACACCGAAAGTCTTCATTGGCTTGATTGTGGGAGCTATGCTTCCATACTGGTTTTCCGCCATGACAATGAAGAGTGTGGGAAGTGCTGCACTCAAAATGGTCGAAGAGGTTCGCAGGCAGTTCAATACTATTCCGGGGCTCATGGAAGGAACAGCAAAGCCAGATTACGCAACTTGTGTCAAGATTTCTACCGATGCTTCCCTAAGGGAGATGATCCCACCAGGCGCCTTGGTCATGCTTACACCGCTTGTTGCCGGTACCTTCTTTGGAGTTGAAACTCTTGCTGGGATTCTTGCAGGCTCACTTGTTTCCGGCGTGCAGATTGCCATTTCTGCATCCAACACCGGCGGGGCATGGGATAATGCAAAGAAATACATAGAGGCCGGTGGTTCAGAACATGCTAAATCACTAGGTCCGAAGGGTTCGGAGCCCCACAAGGCGGCGGTCATAGGCGATACAATCGGAGATCCCCTCAAGGACACTTCAGGTCCTTCACTCAATATTCTGATCAAACTCATGGCAGTCGAGTCCTTGGTGTTTGCTCCATTCTTTGCAGCGCATGGAGGCCTCCTCTTCAAATGGCTTTGA

Protein Analysis

396

Amino Acids

40.97

Weight (kDa)

6.11

Isoelectric Point (pI)

22.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019816)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 93, 857
AccB1I GGYRCC 4 cut(s) 93, 557, 824, 857
AccBSI CCGCTC 1 cut(s) 575
AccII CGCG 1 cut(s) 456
AciI CCGC 7 cut(s) 18, 575, 657, 845, 948, 1040, 1043
AclWI GGATC 4 cut(s) 20, 532, 808, 1061
AcoI YGGCCR 1 cut(s) 432
AcsI RAATTY 1 cut(s) 47
AcuI CTGAAG 3 cut(s) 27, 43, 1068
AcyI GRCGYC 2 cut(s) 558, 825
AfaI GTAC 2 cut(s) 95, 859
AfiI CCNNNNNNNGG 1 cut(s) 1039
AgsI TTSAA 3 cut(s) 724, 875, 1177
AjnI CCWGG 1 cut(s) 820
AluBI AGCT 5 cut(s) 63, 306, 312, 530, 635
AluI AGCT 5 cut(s) 63, 306, 312, 530, 635
Alw26I GTCTC 1 cut(s) 578
AlwI GGATC 4 cut(s) 20, 532, 808, 1061
AoxI GGCC 4 cut(s) 394, 432, 981, 1165
ApeKI GCWGC 8 cut(s) 218, 317, 341, 479, 497, 530, 686, 1154
ApoI RAATTY 1 cut(s) 47
Asp700I GAANNNNTTC 2 cut(s) 611, 708
Asp718I GGTACC 2 cut(s) 93, 857
AspLEI GCGC 3 cut(s) 560, 827, 1159
AspS9I GGNCC 3 cut(s) 395, 1013, 1088
AsuC2I CCSGG 2 cut(s) 436, 735
AvaII GGWCC 2 cut(s) 1013, 1088
AxyI CCTNAGG 1 cut(s) 803
BaeI ACNNNNGTAYC 2 cut(s) 15, 48
BanI GGYRCC 4 cut(s) 93, 557, 824, 857
BanII GRGCYC 2 cut(s) 741, 1032
BbsI GAAGAC 1 cut(s) 604
BbvI GCAGC 8 cut(s) 205, 304, 328, 466, 484, 517, 673, 1166
BccI CCATC 1 cut(s) 424
BciT130I CCWGG 1 cut(s) 822
BciVI GTATCC 2 cut(s) 43, 137
BclI TGATCA 1 cut(s) 1107
BcnI CCSGG 2 cut(s) 436, 735
BcoDI GTCTC 1 cut(s) 578
BfaI CTAG 2 cut(s) 165, 1010
BfmI CTRYAG 2 cut(s) 150, 480
BfoI RGCGCY 2 cut(s) 561, 828
BfuI GTATCC 2 cut(s) 43, 137
BlpI GCTNAGC 1 cut(s) 356
Bme1390I CCNGG 3 cut(s) 436, 735, 822
Bme18I GGWCC 2 cut(s) 1013, 1088
BmgT120I GGNCC 3 cut(s) 395, 1013, 1088
BmiI GGNNCC 7 cut(s) 70, 95, 397, 559, 826, 859, 1029
BmrFI CCNGG 3 cut(s) 436, 735, 822
BmsI GCATC 5 cut(s) 376, 457, 466, 784, 944
BpiI GAAGAC 1 cut(s) 604
BplI GAGNNNNNCTC 4 cut(s) 1056, 1088, 1155, 1187
Bpu1102I GCTNAGC 1 cut(s) 356
BpuEI CTTGAG 1 cut(s) 1058
BpuMI CCSGG 2 cut(s) 436, 735
BsaHI GRCGYC 2 cut(s) 558, 825
BsaI GGTCTC 1 cut(s) 578
BsaJI CCNNGG 3 cut(s) 734, 828, 1131
BsaWI WCCGGW 1 cut(s) 181
Bsc4I CCNNNNNNNGG 1 cut(s) 1039
Bse118I RCCGGY 3 cut(s) 854, 944, 983
Bse1I ACTGG 3 cut(s) 95, 217, 653
Bse21I CCTNAGG 1 cut(s) 803
Bse3DI GCAATG 2 cut(s) 175, 282
BseBI CCWGG 1 cut(s) 822
BseDI CCNNGG 3 cut(s) 734, 828, 1131
BseGI GGATG 3 cut(s) 196, 444, 935
BseLI CCNNNNNNNGG 1 cut(s) 1039
BseMI GCAATG 2 cut(s) 175, 282
BseMII CTCAG 1 cut(s) 370
BseNI ACTGG 3 cut(s) 95, 217, 653
BseRI GAGGAG 1 cut(s) 1160
BseXI GCAGC 8 cut(s) 205, 304, 328, 466, 484, 517, 673, 1166
BseYI CCCAGC 2 cut(s) 8, 884
BsgI GTGCAG 3 cut(s) 206, 672, 938
Bsh1236I CGCG 1 cut(s) 456
BshFI GGCC 4 cut(s) 396, 434, 983, 1167
BshNI GGYRCC 4 cut(s) 93, 557, 824, 857
BsiSI CCGG 7 cut(s) 182, 435, 734, 855, 912, 945, 984
BslI CCNNNNNNNGG 1 cut(s) 1039
BsmAI GTCTC 1 cut(s) 578
BsmI GAATGC 1 cut(s) 357
BsnI GGCC 4 cut(s) 396, 434, 983, 1167
Bso31I GGTCTC 1 cut(s) 578
Bsp1286I GDGCHC 2 cut(s) 741, 1032
Bsp143I GATC 5 cut(s) 12, 524, 813, 1066, 1107
Bsp1720I GCTNAGC 1 cut(s) 356
BspACI CCGC 7 cut(s) 18, 575, 657, 845, 948, 1040, 1043
BspANI GGCC 4 cut(s) 396, 434, 983, 1167
BspCNI CTCAG 1 cut(s) 369
BspFNI CGCG 1 cut(s) 456
BspLI GGNNCC 7 cut(s) 70, 95, 397, 559, 826, 859, 1029
BspMAI CTGCAG 1 cut(s) 484
BspPI GGATC 4 cut(s) 20, 532, 808, 1061
BspT107I GGYRCC 4 cut(s) 93, 557, 824, 857
BspTNI GGTCTC 1 cut(s) 578
BsrBI CCGCTC 1 cut(s) 575
BsrDI GCAATG 2 cut(s) 175, 282
BsrFI RCCGGY 3 cut(s) 854, 944, 983
BsrI ACTGG 3 cut(s) 95, 217, 653
BssAI RCCGGY 3 cut(s) 854, 944, 983
BssECI CCNNGG 3 cut(s) 734, 828, 1131
BssMI GATC 5 cut(s) 12, 524, 813, 1066, 1107
BssNI GRCGYC 2 cut(s) 558, 825
BssT1I CCWWGG 2 cut(s) 828, 1131
Bst2UI CCWGG 1 cut(s) 822
Bst4CI ACNGT 2 cut(s) 179, 589
Bst6I CTCTTC 5 cut(s) 62, 104, 665, 699, 1178
BstACI GRCGYC 2 cut(s) 558, 825
BstAPI GCANNNNNTGC 1 cut(s) 386
BstC8I GCNNGC 4 cut(s) 243, 716, 898, 917
BstDEI CTNAG 2 cut(s) 356, 803
BstF5I GGATG 3 cut(s) 196, 444, 935
BstFNI CGCG 1 cut(s) 456
BstH2I RGCGCY 2 cut(s) 561, 828
BstHHI GCGC 3 cut(s) 560, 827, 1159
BstKTI GATC 5 cut(s) 15, 527, 816, 1069, 1110
BstMAI GTCTC 1 cut(s) 578
BstMBI GATC 5 cut(s) 12, 524, 813, 1066, 1107
BstMWI GCNNNNNNNGC 8 cut(s) 14, 341, 386, 402, 431, 476, 844, 932
BstNI CCWGG 1 cut(s) 822
BstNSI RCATGY 1 cut(s) 1001
BstSCI CCNGG 3 cut(s) 434, 733, 820
BstSFI CTRYAG 2 cut(s) 150, 480
BstUI CGCG 1 cut(s) 456
BstV1I GCAGC 8 cut(s) 205, 304, 328, 466, 484, 517, 673, 1166
BstV2I GAAGAC 1 cut(s) 604
BstX2I RGATCY 1 cut(s) 1066
BstYI RGATCY 1 cut(s) 1066
Bsu36I CCTNAGG 1 cut(s) 803
BsuI GTATCC 2 cut(s) 43, 137
BsuRI GGCC 4 cut(s) 396, 434, 983, 1167
BtsCI GGATG 3 cut(s) 196, 444, 935
Cac8I GCNNGC 4 cut(s) 243, 716, 898, 917
CfoI GCGC 3 cut(s) 560, 827, 1159
Cfr10I RCCGGY 3 cut(s) 854, 944, 983
Cfr13I GGNCC 3 cut(s) 395, 1013, 1088
Csp6I GTAC 2 cut(s) 94, 858
CspCI CAANNNNNGTGG 4 cut(s) 358, 393, 397, 432
CviAII CATG 9 cut(s) 204, 322, 661, 742, 835, 954, 998, 1117, 1160
CviQI GTAC 2 cut(s) 94, 858
DdeI CTNAG 2 cut(s) 356, 803
DinI GGCGCC 2 cut(s) 559, 826
DpnI GATC 5 cut(s) 14, 526, 815, 1068, 1109
DpnII GATC 5 cut(s) 12, 524, 813, 1066, 1107
EaeI YGGCCR 1 cut(s) 432
Eam1104I CTCTTC 5 cut(s) 62, 104, 665, 699, 1178
EarI CTCTTC 5 cut(s) 62, 104, 665, 699, 1178
EciI GGCGGA 1 cut(s) 646
Eco130I CCWWGG 2 cut(s) 828, 1131
Eco147I AGGCCT 1 cut(s) 1167
Eco24I GRGCYC 2 cut(s) 741, 1032
Eco31I GGTCTC 1 cut(s) 578
Eco47I GGWCC 2 cut(s) 1013, 1088
Eco57I CTGAAG 3 cut(s) 27, 43, 1068
Eco81I CCTNAGG 1 cut(s) 803
EcoO109I RGGNCCY 1 cut(s) 1088
EcoRI GAATTC 1 cut(s) 47
EcoRII CCWGG 1 cut(s) 820
EcoT14I CCWWGG 2 cut(s) 828, 1131
EcoT38I GRGCYC 2 cut(s) 741, 1032
EgeI GGCGCC 2 cut(s) 559, 826
EheI GGCGCC 2 cut(s) 559, 826
ErhI CCWWGG 2 cut(s) 828, 1131
FaeI CATG 9 cut(s) 207, 325, 664, 745, 838, 957, 1001, 1120, 1163
FatI CATG 9 cut(s) 203, 321, 660, 741, 834, 953, 997, 1116, 1159
FauI CCCGC 2 cut(s) 568, 941
FbaI TGATCA 1 cut(s) 1107
FokI GGATG 3 cut(s) 203, 451, 922
FriOI GRGCYC 2 cut(s) 741, 1032
FspBI CTAG 2 cut(s) 165, 1010
GlaI GCGC 3 cut(s) 559, 826, 1158
GsaI CCCAGC 2 cut(s) 12, 888
HaeII RGCGCY 2 cut(s) 561, 828
HaeIII GGCC 4 cut(s) 396, 434, 983, 1167
HapII CCGG 7 cut(s) 182, 435, 734, 855, 912, 945, 984
HhaI GCGC 3 cut(s) 560, 827, 1159
Hin1I GRCGYC 2 cut(s) 558, 825
Hin1II CATG 9 cut(s) 207, 325, 664, 745, 838, 957, 1001, 1120, 1163
Hin6I GCGC 3 cut(s) 558, 825, 1157
HinP1I GCGC 3 cut(s) 558, 825, 1157
HincII GTYRAC 1 cut(s) 600
HindII GTYRAC 1 cut(s) 600
HinfI GANTC 3 cut(s) 200, 889, 1127
HpaII CCGG 7 cut(s) 182, 435, 734, 855, 912, 945, 984
Hpy166II GTNNAC 1 cut(s) 600
Hpy188I TCNGA 6 cut(s) 46, 994, 1017, 1027, 1064, 1107
Hpy188III TCNNGA 1 cut(s) 781
Hpy8I GTNNAC 1 cut(s) 600
HpyAV CCTTC 5 cut(s) 51, 740, 871, 1012, 1101
HpyCH4III ACNGT 2 cut(s) 179, 589
HpyCH4IV ACGT 2 cut(s) 228, 300
HpyF10VI GCNNNNNNNGC 8 cut(s) 14, 341, 386, 402, 431, 476, 844, 932
HpyF3I CTNAG 2 cut(s) 356, 803
HpySE526I ACGT 2 cut(s) 228, 300
Hsp92I GRCGYC 2 cut(s) 558, 825
Hsp92II CATG 9 cut(s) 207, 325, 664, 745, 838, 957, 1001, 1120, 1163
HspAI GCGC 3 cut(s) 558, 825, 1157
KasI GGCGCC 2 cut(s) 557, 824
KpnI GGTACC 2 cut(s) 97, 861
Ksp22I TGATCA 1 cut(s) 1107
Kzo9I GATC 5 cut(s) 12, 524, 813, 1066, 1107
LmnI GCTCC 3 cut(s) 632, 1027, 1147
Lsp1109I GCAGC 8 cut(s) 205, 304, 328, 466, 484, 517, 673, 1166
LweI GCATC 5 cut(s) 376, 457, 466, 784, 944
MaeI CTAG 2 cut(s) 165, 1010
MaeII ACGT 2 cut(s) 228, 300
MaeIII GTNAC 2 cut(s) 22, 251
MalI GATC 5 cut(s) 14, 526, 815, 1068, 1109
MbiI CCGCTC 1 cut(s) 575
MboI GATC 5 cut(s) 12, 524, 813, 1066, 1107
MboII GAAGA 6 cut(s) 49, 91, 604, 682, 716, 1165
MfeI CAATTG 2 cut(s) 114, 381
MflI RGATCY 1 cut(s) 1066
MhlI GDGCHC 2 cut(s) 741, 1032
MluCI AATT 4 cut(s) 47, 114, 330, 381
Mly113I GGCGCC 2 cut(s) 558, 825
MlyI GAGTC 1 cut(s) 1136
MmeI TCCRAC 1 cut(s) 963
MnlI CCTC 7 cut(s) 107, 700, 973, 1082, 1157, 1178, 1181
MroXI GAANNNNTTC 2 cut(s) 611, 708
MslI CAYNNNNRTG 2 cut(s) 272, 665
MspA1I CMGCKG 2 cut(s) 20, 530
MspI CCGG 7 cut(s) 182, 435, 734, 855, 912, 945, 984
MspR9I CCNGG 3 cut(s) 436, 735, 822
MunI CAATTG 2 cut(s) 114, 381
Mva1269I GAATGC 1 cut(s) 357
MvaI CCWGG 1 cut(s) 822
MvnI CGCG 1 cut(s) 456
MwoI GCNNNNNNNGC 8 cut(s) 14, 341, 386, 402, 431, 476, 844, 932
NarI GGCGCC 2 cut(s) 558, 825
NciI CCSGG 2 cut(s) 436, 735
NdeII GATC 5 cut(s) 12, 524, 813, 1066, 1107
NlaIII CATG 9 cut(s) 207, 325, 664, 745, 838, 957, 1001, 1120, 1163
NlaIV GGNNCC 7 cut(s) 70, 95, 397, 559, 826, 859, 1029
NmuCI GTSAC 1 cut(s) 22
NspI RCATGY 1 cut(s) 1001
PceI AGGCCT 1 cut(s) 1167
PctI GAATGC 1 cut(s) 357
PdmI GAANNNNTTC 2 cut(s) 611, 708
PfeI GAWTC 2 cut(s) 200, 889
PleI GAGTC 1 cut(s) 1135
PluTI GGCGCC 2 cut(s) 561, 828
PpsI GAGTC 1 cut(s) 1135
PpuMI RGGWCCY 1 cut(s) 1088
Psp5II RGGWCCY 1 cut(s) 1088
Psp6I CCWGG 1 cut(s) 820
PspFI CCCAGC 2 cut(s) 8, 884
PspGI CCWGG 1 cut(s) 820
PspN4I GGNNCC 7 cut(s) 70, 95, 397, 559, 826, 859, 1029
PspPI GGNCC 3 cut(s) 395, 1013, 1088
PspPPI RGGWCCY 1 cut(s) 1088
PstI CTGCAG 1 cut(s) 484
PsuI RGATCY 1 cut(s) 1066
PvuII CAGCTG 1 cut(s) 530
RsaI GTAC 2 cut(s) 95, 859
RsaNI GTAC 2 cut(s) 94, 858
RseI CAYNNNNRTG 2 cut(s) 272, 665
Sau3AI GATC 5 cut(s) 12, 524, 813, 1066, 1107
Sau96I GGNCC 3 cut(s) 395, 1013, 1088
SchI GAGTC 1 cut(s) 1136
ScrFI CCNGG 3 cut(s) 436, 735, 822
SduI GDGCHC 2 cut(s) 741, 1032
SfaNI GCATC 5 cut(s) 376, 457, 466, 784, 944
SfcI CTRYAG 2 cut(s) 150, 480
SfoI GGCGCC 2 cut(s) 559, 826
SgrAI CRCCGGYG 1 cut(s) 944
SinI GGWCC 2 cut(s) 1013, 1088
SmiMI CAYNNNNRTG 2 cut(s) 272, 665
SmlI CTYRAG 1 cut(s) 1073
SmoI CTYRAG 1 cut(s) 1073
Sse9I AATT 4 cut(s) 47, 114, 330, 381
SseBI AGGCCT 1 cut(s) 1167
SsiI CCGC 7 cut(s) 18, 575, 657, 845, 948, 1040, 1043
SspDI GGCGCC 2 cut(s) 557, 824
SspI AATATT 1 cut(s) 1102
SspMI CTAG 2 cut(s) 165, 1010
StuI AGGCCT 1 cut(s) 1167
StyD4I CCNGG 3 cut(s) 434, 733, 820
StyI CCWWGG 2 cut(s) 828, 1131
TaaI ACNGT 2 cut(s) 179, 589
TaiI ACGT 2 cut(s) 231, 303
TaqI TCGA 2 cut(s) 702, 1125
TasI AATT 4 cut(s) 47, 114, 330, 381
TauI GCSGC 2 cut(s) 20, 1043
TfiI GAWTC 2 cut(s) 200, 889
TseFI GTSAC 1 cut(s) 22
TseI GCWGC 8 cut(s) 218, 317, 341, 479, 497, 530, 686, 1154
Tsp45I GTSAC 1 cut(s) 22
TspDTI ATGAA 3 cut(s) 192, 604, 683
VpaK11BI GGWCC 2 cut(s) 1013, 1088
XapI RAATTY 1 cut(s) 47
XceI RCATGY 1 cut(s) 1001
XmnI GAANNNNTTC 2 cut(s) 611, 708
XspI CTAG 2 cut(s) 165, 1010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.