pycom12g19450

Pyrophosphate-energized vacuolar membrane proton pump

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
21294627 .. 21296395
1769 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g19450.1

Sequence Viewer

Length: 1128 bp
ATGACTGCCGGGATCGCCGTGGTCACTTTTGTAGCTTTGCCATCAGAGTTCACTCTCTTCAGCTTTGGAACCAATAAGACTGTCAAGAACTGGTACCTCTTCTTTTGTGTAGCAATTGGCTTGTGGGCTGGTCTTGTTATCGGATACACTACAGAGTATTACACTAGCAATGCTTACAGTCCGGTACAGGATGTGGCGGATTCTTGCAGGACTGGTGCTGCAACAAACGTGATTTTCGGGCTGGCTCTTGGTTACAAATCAGTCATCATTCCTGTGTTCGCCATTGCGTTTGCTATCTACGTCAGCTTTAGTTTGGCTGCCATGTATGGAATTGCTGTGGCTGCTTTGGGAATGCTCAGCACCATCTCCACAGGTCTTGCAATTGATGCTTACGGCCCAATAAGTGACAATGCTGGTGGGATTGCAGAGATGGCCGGGATGAGCCACGAGATACGCGAAAGAACAGATGCTTTAGATGCTGCTGGAAACACAACTGCTGCTATTGGCAAGGGTTTTGCTATTGGATCGGCTGCTCTTGTTTCTCTTGCTTTGTTCGGTGCCTATGTCAGCAGAGCCGGAATAGACACTGTTGATGTGTTGACGCCGAAAGTCTTCATTGGCCTGCTTGTGGGAGCTATGCTTCCCTACTGGTTTTCTGCCATGACAATGAAGAGCGTGGGAAGTGCAGCGCTTAAAATGGTCGAAGAGGTTCGCAGGCAATTCAACACGATTCCAGGGCTCATGGAAGGAACAGCAAAGCCAGATTACGCAACATGCGTCAAGATTTCCACAGATGCTTCCCTCAAGGAGATGATCCCGCCAGGCGCTTTGGTCATGCTTACACCACTCATTGCCGGCACCTTCTTTGGAGTTGAAACTCTTGCCGGGATTCTTGCTGGTTCACTTGTTTCCGGTGTGCAGGCCGGCGCTTCAGAACATGCTAAGTCACTAGGTCCCAAGGGTTCGGAGCCCCACAAGGCGGCCGTCATAGGCGATACAATCGGAGATCCGCTCAAGGACACTTCAGGTCCTTCGCTCAATATTCTGATCAAGCTCATGGCTGTTGAGTCCTTGGTGTTTGCTCCGTTCTTTGCAGCTCATGGAGGCCTCCTCTTCAAATGGCTTTGA

Protein Analysis

376

Amino Acids

38.89

Weight (kDa)

5.6

Isoelectric Point (pI)

20.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
H_PPase PF03030 17 - 360 1.6e-138 Inorganic H+ pyrophosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0019816)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 93
AccB1I GGYRCC 3 cut(s) 93, 557, 857
AccBSI CCGCTC 1 cut(s) 1012
AccII CGCG 1 cut(s) 456
AciI CCGC 4 cut(s) 197, 818, 980, 1010
AclWI GGATC 4 cut(s) 20, 532, 808, 1001
AcoI YGGCCR 2 cut(s) 432, 981
AcuI CTGAAG 3 cut(s) 43, 915, 1008
AcyI GRCGYC 1 cut(s) 602
AfaI GTAC 2 cut(s) 95, 186
AfeI AGCGCT 1 cut(s) 690
AfiI CCNNNNNNNGG 2 cut(s) 628, 979
AgsI TTSAA 3 cut(s) 724, 875, 1117
AjnI CCWGG 2 cut(s) 733, 820
AluBI AGCT 6 cut(s) 35, 63, 306, 635, 1054, 1097
AluI AGCT 6 cut(s) 35, 63, 306, 635, 1054, 1097
AlwI GGATC 4 cut(s) 20, 532, 808, 1001
Aor51HI AGCGCT 1 cut(s) 690
AoxI GGCC 6 cut(s) 394, 432, 619, 921, 981, 1105
ApeKI GCWGC 8 cut(s) 218, 317, 341, 479, 497, 530, 686, 1094
Asp700I GAANNNNTTC 2 cut(s) 611, 708
Asp718I GGTACC 1 cut(s) 93
AspLEI GCGC 3 cut(s) 691, 827, 929
AspS9I GGNCC 3 cut(s) 395, 953, 1028
AsuC2I CCSGG 3 cut(s) 10, 436, 886
AvaII GGWCC 2 cut(s) 953, 1028
BanI GGYRCC 3 cut(s) 93, 557, 857
BanII GRGCYC 2 cut(s) 741, 972
BauI CACGAG 1 cut(s) 446
BbsI GAAGAC 1 cut(s) 604
BbvI GCAGC 8 cut(s) 205, 304, 328, 466, 484, 517, 698, 1106
BccI CCATC 3 cut(s) 49, 371, 424
BceAI ACGGC 3 cut(s) 2, 409, 968
BciT130I CCWGG 2 cut(s) 735, 822
BciVI GTATCC 1 cut(s) 137
BclI TGATCA 1 cut(s) 1047
BcnI CCSGG 3 cut(s) 10, 436, 886
BfaI CTAG 2 cut(s) 165, 950
BfmI CTRYAG 1 cut(s) 150
BfoI RGCGCY 3 cut(s) 692, 828, 930
BfuI GTATCC 1 cut(s) 137
BisI GCNGC 9 cut(s) 219, 318, 342, 480, 498, 531, 687, 981, 1095
BlpI GCTNAGC 1 cut(s) 356
BlsI GCNGC 9 cut(s) 220, 319, 343, 481, 499, 532, 688, 982, 1096
Bme1390I CCNGG 5 cut(s) 10, 436, 735, 822, 886
Bme18I GGWCC 2 cut(s) 953, 1028
BmgT120I GGNCC 3 cut(s) 395, 953, 1028
BmiI GGNNCC 6 cut(s) 70, 95, 559, 859, 955, 969
BmrFI CCNGG 5 cut(s) 10, 436, 735, 822, 886
BmsI GCATC 4 cut(s) 376, 457, 466, 784
BpiI GAAGAC 1 cut(s) 604
BplI GAGNNNNNCTC 4 cut(s) 996, 1028, 1095, 1127
Bpu1102I GCTNAGC 1 cut(s) 356
BpuEI CTTGAG 2 cut(s) 788, 998
BpuMI CCSGG 3 cut(s) 10, 436, 886
BsaHI GRCGYC 1 cut(s) 602
BsaJI CCNNGG 4 cut(s) 18, 734, 957, 1071
BsaWI WCCGGW 2 cut(s) 181, 911
Bsc4I CCNNNNNNNGG 2 cut(s) 628, 979
Bse118I RCCGGY 2 cut(s) 854, 923
Bse1I ACTGG 3 cut(s) 95, 217, 653
Bse3DI GCAATG 3 cut(s) 175, 282, 849
BseBI CCWGG 2 cut(s) 735, 822
BseDI CCNNGG 4 cut(s) 18, 734, 957, 1071
BseGI GGATG 2 cut(s) 196, 444
BseLI CCNNNNNNNGG 2 cut(s) 628, 979
BseMI GCAATG 3 cut(s) 175, 282, 849
BseMII CTCAG 1 cut(s) 370
BseNI ACTGG 3 cut(s) 95, 217, 653
BseRI GAGGAG 1 cut(s) 1100
BseX3I CGGCCG 1 cut(s) 981
BseXI GCAGC 8 cut(s) 205, 304, 328, 466, 484, 517, 698, 1106
BsgI GTGCAG 2 cut(s) 705, 938
Bsh1236I CGCG 1 cut(s) 456
Bsh1285I CGRYCG 1 cut(s) 984
BshFI GGCC 6 cut(s) 396, 434, 621, 923, 983, 1107
BshNI GGYRCC 3 cut(s) 93, 557, 857
BsiEI CGRYCG 1 cut(s) 984
BsiSI CCGG 8 cut(s) 9, 182, 435, 576, 855, 885, 912, 924
BslFI GGGAC 1 cut(s) 939
BslI CCNNNNNNNGG 2 cut(s) 628, 979
BsmFI GGGAC 1 cut(s) 939
BsmI GAATGC 1 cut(s) 357
BsnI GGCC 6 cut(s) 396, 434, 621, 923, 983, 1107
Bsp1286I GDGCHC 2 cut(s) 741, 972
Bsp143I GATC 5 cut(s) 12, 524, 813, 1006, 1047
Bsp1720I GCTNAGC 1 cut(s) 356
BspACI CCGC 4 cut(s) 197, 818, 980, 1010
BspANI GGCC 6 cut(s) 396, 434, 621, 923, 983, 1107
BspCNI CTCAG 1 cut(s) 369
BspFNI CGCG 1 cut(s) 456
BspLI GGNNCC 6 cut(s) 70, 95, 559, 859, 955, 969
BspPI GGATC 4 cut(s) 20, 532, 808, 1001
BspQI GCTCTTC 1 cut(s) 665
BspT107I GGYRCC 3 cut(s) 93, 557, 857
BsrBI CCGCTC 1 cut(s) 1012
BsrDI GCAATG 3 cut(s) 175, 282, 849
BsrFI RCCGGY 2 cut(s) 854, 923
BsrI ACTGG 3 cut(s) 95, 217, 653
BssAI RCCGGY 2 cut(s) 854, 923
BssECI CCNNGG 4 cut(s) 18, 734, 957, 1071
BssMI GATC 5 cut(s) 12, 524, 813, 1006, 1047
BssNI GRCGYC 1 cut(s) 602
BssSI CACGAG 1 cut(s) 446
BssT1I CCWWGG 2 cut(s) 957, 1071
Bst2BI CACGAG 1 cut(s) 446
Bst2UI CCWGG 2 cut(s) 735, 822
Bst4CI ACNGT 3 cut(s) 82, 179, 589
Bst6I CTCTTC 5 cut(s) 62, 104, 665, 699, 1118
BstACI GRCGYC 1 cut(s) 602
BstAPI GCANNNNNTGC 1 cut(s) 386
BstC8I GCNNGC 6 cut(s) 243, 623, 716, 856, 921, 925
BstDEI CTNAG 2 cut(s) 356, 942
BstDSI CCRYGG 1 cut(s) 18
BstF5I GGATG 2 cut(s) 196, 444
BstFNI CGCG 1 cut(s) 456
BstH2I RGCGCY 3 cut(s) 692, 828, 930
BstHHI GCGC 3 cut(s) 691, 827, 929
BstKTI GATC 5 cut(s) 15, 527, 816, 1009, 1050
BstMBI GATC 5 cut(s) 12, 524, 813, 1006, 1047
BstMCI CGRYCG 1 cut(s) 984
BstMWI GCNNNNNNNGC 5 cut(s) 14, 341, 386, 431, 476
BstNI CCWGG 2 cut(s) 735, 822
BstNSI RCATGY 2 cut(s) 777, 941
BstSCI CCNGG 5 cut(s) 8, 434, 733, 820, 884
BstSFI CTRYAG 1 cut(s) 150
BstUI CGCG 1 cut(s) 456
BstV1I GCAGC 8 cut(s) 205, 304, 328, 466, 484, 517, 698, 1106
BstV2I GAAGAC 1 cut(s) 604
BstX2I RGATCY 1 cut(s) 1006
BstYI RGATCY 1 cut(s) 1006
BstZI CGGCCG 1 cut(s) 981
BsuI GTATCC 1 cut(s) 137
BsuRI GGCC 6 cut(s) 396, 434, 621, 923, 983, 1107
BtgI CCRYGG 1 cut(s) 18
BtsCI GGATG 2 cut(s) 196, 444
BtsIMutI CAGTG 1 cut(s) 585
Cac8I GCNNGC 6 cut(s) 243, 623, 716, 856, 921, 925
CfoI GCGC 3 cut(s) 691, 827, 929
Cfr10I RCCGGY 2 cut(s) 854, 923
Cfr13I GGNCC 3 cut(s) 395, 953, 1028
CseI GACGC 2 cut(s) 610, 766
Csp6I GTAC 2 cut(s) 94, 185
CspCI CAANNNNNGTGG 4 cut(s) 358, 393, 397, 432
CviAII CATG 8 cut(s) 322, 661, 742, 774, 835, 938, 1057, 1100
CviQI GTAC 2 cut(s) 94, 185
DdeI CTNAG 2 cut(s) 356, 942
DpnI GATC 5 cut(s) 14, 526, 815, 1008, 1049
DpnII GATC 5 cut(s) 12, 524, 813, 1006, 1047
EaeI YGGCCR 2 cut(s) 432, 981
EagI CGGCCG 1 cut(s) 981
Eam1104I CTCTTC 5 cut(s) 62, 104, 665, 699, 1118
EarI CTCTTC 5 cut(s) 62, 104, 665, 699, 1118
EciI GGCGGA 1 cut(s) 212
EclXI CGGCCG 1 cut(s) 981
Eco130I CCWWGG 2 cut(s) 957, 1071
Eco147I AGGCCT 1 cut(s) 1107
Eco24I GRGCYC 2 cut(s) 741, 972
Eco47I GGWCC 2 cut(s) 953, 1028
Eco47III AGCGCT 1 cut(s) 690
Eco52I CGGCCG 1 cut(s) 981
Eco57I CTGAAG 3 cut(s) 43, 915, 1008
EcoO109I RGGNCCY 2 cut(s) 953, 1028
EcoRII CCWGG 2 cut(s) 733, 820
EcoT14I CCWWGG 2 cut(s) 957, 1071
EcoT38I GRGCYC 2 cut(s) 741, 972
ErhI CCWWGG 2 cut(s) 957, 1071
FaeI CATG 8 cut(s) 325, 664, 745, 777, 838, 941, 1060, 1103
FaqI GGGAC 1 cut(s) 939
FatI CATG 8 cut(s) 321, 660, 741, 773, 834, 937, 1056, 1099
FauI CCCGC 1 cut(s) 825
FbaI TGATCA 1 cut(s) 1047
Fnu4HI GCNGC 9 cut(s) 219, 318, 342, 480, 498, 531, 687, 981, 1095
FokI GGATG 2 cut(s) 203, 451
FriOI GRGCYC 2 cut(s) 741, 972
Fsp4HI GCNGC 9 cut(s) 219, 318, 342, 480, 498, 531, 687, 981, 1095
FspBI CTAG 2 cut(s) 165, 950
GlaI GCGC 3 cut(s) 690, 826, 928
GluI GCNGC 9 cut(s) 219, 318, 342, 480, 498, 531, 687, 981, 1095
HaeII RGCGCY 3 cut(s) 692, 828, 930
HaeIII GGCC 6 cut(s) 396, 434, 621, 923, 983, 1107
HapII CCGG 8 cut(s) 9, 182, 435, 576, 855, 885, 912, 924
HgaI GACGC 2 cut(s) 610, 766
HhaI GCGC 3 cut(s) 691, 827, 929
Hin1I GRCGYC 1 cut(s) 602
Hin1II CATG 8 cut(s) 325, 664, 745, 777, 838, 941, 1060, 1103
Hin6I GCGC 3 cut(s) 689, 825, 927
HinP1I GCGC 3 cut(s) 689, 825, 927
HincII GTYRAC 1 cut(s) 600
HindII GTYRAC 1 cut(s) 600
HinfI GANTC 4 cut(s) 200, 730, 889, 1067
HpaII CCGG 8 cut(s) 9, 182, 435, 576, 855, 885, 912, 924
Hpy166II GTNNAC 3 cut(s) 51, 600, 902
Hpy188I TCNGA 6 cut(s) 46, 143, 934, 967, 1004, 1047
Hpy188III TCNNGA 2 cut(s) 85, 781
Hpy8I GTNNAC 3 cut(s) 51, 600, 902
HpyAV CCTTC 3 cut(s) 740, 871, 1041
HpyCH4III ACNGT 3 cut(s) 82, 179, 589
HpyCH4IV ACGT 2 cut(s) 228, 300
HpyCH4V TGCA 7 cut(s) 207, 221, 380, 425, 686, 919, 1094
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 341, 386, 431, 476
HpyF3I CTNAG 2 cut(s) 356, 942
HpySE526I ACGT 2 cut(s) 228, 300
Hsp92I GRCGYC 1 cut(s) 602
Hsp92II CATG 8 cut(s) 325, 664, 745, 777, 838, 941, 1060, 1103
HspAI GCGC 3 cut(s) 689, 825, 927
KpnI GGTACC 1 cut(s) 97
KroI GCCGGC 2 cut(s) 854, 923
KroNI GCCGGC 2 cut(s) 856, 925
Ksp22I TGATCA 1 cut(s) 1047
Kzo9I GATC 5 cut(s) 12, 524, 813, 1006, 1047
LguI GCTCTTC 1 cut(s) 665
LmnI GCTCC 3 cut(s) 632, 967, 1087
Lsp1109I GCAGC 8 cut(s) 205, 304, 328, 466, 484, 517, 698, 1106
LweI GCATC 4 cut(s) 376, 457, 466, 784
MaeI CTAG 2 cut(s) 165, 950
MaeII ACGT 2 cut(s) 228, 300
MaeIII GTNAC 4 cut(s) 22, 251, 404, 945
MalI GATC 5 cut(s) 14, 526, 815, 1008, 1049
MbiI CCGCTC 1 cut(s) 1012
MboI GATC 5 cut(s) 12, 524, 813, 1006, 1047
MboII GAAGA 6 cut(s) 49, 91, 604, 682, 716, 1105
MfeI CAATTG 2 cut(s) 114, 381
MflI RGATCY 1 cut(s) 1006
MhlI GDGCHC 2 cut(s) 741, 972
MluCI AATT 4 cut(s) 114, 330, 381, 719
MlyI GAGTC 1 cut(s) 1076
MnlI CCTC 6 cut(s) 107, 700, 812, 1097, 1118, 1121
MroNI GCCGGC 2 cut(s) 854, 923
MroXI GAANNNNTTC 2 cut(s) 611, 708
MseI TTAA 1 cut(s) 693
MslI CAYNNNNRTG 2 cut(s) 272, 665
MspI CCGG 8 cut(s) 9, 182, 435, 576, 855, 885, 912, 924
MspR9I CCNGG 5 cut(s) 10, 436, 735, 822, 886
MunI CAATTG 2 cut(s) 114, 381
Mva1269I GAATGC 1 cut(s) 357
MvaI CCWGG 2 cut(s) 735, 822
MvnI CGCG 1 cut(s) 456
MwoI GCNNNNNNNGC 5 cut(s) 14, 341, 386, 431, 476
NaeI GCCGGC 2 cut(s) 856, 925
NciI CCSGG 3 cut(s) 10, 436, 886
NdeII GATC 5 cut(s) 12, 524, 813, 1006, 1047
NgoMIV GCCGGC 2 cut(s) 854, 923
NlaIII CATG 8 cut(s) 325, 664, 745, 777, 838, 941, 1060, 1103
NlaIV GGNNCC 6 cut(s) 70, 95, 559, 859, 955, 969
NmuCI GTSAC 3 cut(s) 22, 404, 945
NspI RCATGY 2 cut(s) 777, 941
PceI AGGCCT 1 cut(s) 1107
PciSI GCTCTTC 1 cut(s) 665
PcsI WCGNNNNNNNCGW 2 cut(s) 453, 774
PctI GAATGC 1 cut(s) 357
PdiI GCCGGC 2 cut(s) 856, 925
PdmI GAANNNNTTC 2 cut(s) 611, 708
PfeI GAWTC 3 cut(s) 200, 730, 889
PkrI GCNGC 9 cut(s) 220, 319, 343, 481, 499, 532, 688, 982, 1096
PleI GAGTC 1 cut(s) 1075
PpsI GAGTC 1 cut(s) 1075
PpuMI RGGWCCY 2 cut(s) 953, 1028
Psp5II RGGWCCY 2 cut(s) 953, 1028
Psp6I CCWGG 2 cut(s) 733, 820
PspGI CCWGG 2 cut(s) 733, 820
PspN4I GGNNCC 6 cut(s) 70, 95, 559, 859, 955, 969
PspPI GGNCC 3 cut(s) 395, 953, 1028
PspPPI RGGWCCY 2 cut(s) 953, 1028
PsuI RGATCY 1 cut(s) 1006
RsaI GTAC 2 cut(s) 95, 186
RsaNI GTAC 2 cut(s) 94, 185
RseI CAYNNNNRTG 2 cut(s) 272, 665
SapI GCTCTTC 1 cut(s) 665
SaqAI TTAA 1 cut(s) 693
SatI GCNGC 9 cut(s) 219, 318, 342, 480, 498, 531, 687, 981, 1095
Sau3AI GATC 5 cut(s) 12, 524, 813, 1006, 1047
Sau96I GGNCC 3 cut(s) 395, 953, 1028
SchI GAGTC 1 cut(s) 1076
ScrFI CCNGG 5 cut(s) 10, 436, 735, 822, 886
SduI GDGCHC 2 cut(s) 741, 972
SfaNI GCATC 4 cut(s) 376, 457, 466, 784
SfcI CTRYAG 1 cut(s) 150
SinI GGWCC 2 cut(s) 953, 1028
SmiMI CAYNNNNRTG 2 cut(s) 272, 665
SmlI CTYRAG 2 cut(s) 803, 1013
SmoI CTYRAG 2 cut(s) 803, 1013
Sse9I AATT 4 cut(s) 114, 330, 381, 719
SseBI AGGCCT 1 cut(s) 1107
SsiI CCGC 4 cut(s) 197, 818, 980, 1010
SspI AATATT 1 cut(s) 1042
SspMI CTAG 2 cut(s) 165, 950
StuI AGGCCT 1 cut(s) 1107
StyD4I CCNGG 5 cut(s) 8, 434, 733, 820, 884
StyI CCWWGG 2 cut(s) 957, 1071
TaaI ACNGT 3 cut(s) 82, 179, 589
TaiI ACGT 2 cut(s) 231, 303
TaqI TCGA 1 cut(s) 702
TasI AATT 4 cut(s) 114, 330, 381, 719
TauI GCSGC 1 cut(s) 983
TfiI GAWTC 3 cut(s) 200, 730, 889
Tru1I TTAA 1 cut(s) 693
Tru9I TTAA 1 cut(s) 693
TscAI CASTG 1 cut(s) 592
TseFI GTSAC 3 cut(s) 22, 404, 945
TseI GCWGC 8 cut(s) 218, 317, 341, 479, 497, 530, 686, 1094
Tsp45I GTSAC 3 cut(s) 22, 404, 945
TspDTI ATGAA 2 cut(s) 604, 683
TspGWI ACGGA 1 cut(s) 1074
TspRI CASTG 1 cut(s) 592
VpaK11BI GGWCC 2 cut(s) 953, 1028
XceI RCATGY 2 cut(s) 777, 941
XmnI GAANNNNTTC 2 cut(s) 611, 708
XspI CTAG 2 cut(s) 165, 950
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.