EF-hand domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g03000 |
| malus_domestica | MD04G1223900.v1.1 |
| prunus_persica | Prupe.6G342600_v2.0.a1 Prupe.6G342600_v2.0.a1 |
| pyrus_communis | pycom04g19730 |
| rosa_chinensis | RchiOBHm_Chr3g0451781 |
| rosa_laevigata | RLG00000025650 |
| rosa_multiflora | Rmu_sc0006510.1_g000021 |
| rosa_roxburghii | Rroxscaffold_164G00436320 Rroxscaffold_6G00428970 |
| rosa_rugosa | Rorug02G0636000 Rorug02G0636100 Rorug02G0636200.1 |
| rosa_samantha | Rh3AG037700 Rh3CG037300 Rh3DG038100 |
| rosa_wichuraiana | Rw3G002810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 260 |
| AciI | CCGC | 1 cut(s) | 260 |
| AclWI | GGATC | 3 cut(s) | 131, 144, 309 |
| AcsI | RAATTY | 1 cut(s) | 437 |
| AgsI | TTSAA | 4 cut(s) | 107, 226, 274, 286 |
| AluBI | AGCT | 3 cut(s) | 62, 281, 458 |
| AluI | AGCT | 3 cut(s) | 62, 281, 458 |
| AlwI | GGATC | 3 cut(s) | 131, 144, 309 |
| ApeKI | GCWGC | 1 cut(s) | 93 |
| ApoI | RAATTY | 1 cut(s) | 437 |
| AspS9I | GGNCC | 1 cut(s) | 25 |
| AsuHPI | GGTGA | 2 cut(s) | 312, 425 |
| AvaII | GGWCC | 1 cut(s) | 25 |
| BamHI | GGATCC | 1 cut(s) | 136 |
| BbvI | GCAGC | 1 cut(s) | 80 |
| BccI | CCATC | 7 cut(s) | 77, 83, 185, 302, 337, 404, 410 |
| BclI | TGATCA | 1 cut(s) | 390 |
| BisI | GCNGC | 1 cut(s) | 94 |
| BlsI | GCNGC | 1 cut(s) | 95 |
| Bme18I | GGWCC | 1 cut(s) | 25 |
| BmgT120I | GGNCC | 1 cut(s) | 25 |
| BmiI | GGNNCC | 2 cut(s) | 138, 202 |
| BseGI | GGATG | 4 cut(s) | 88, 268, 313, 415 |
| BseXI | GCAGC | 1 cut(s) | 80 |
| Bsh1236I | CGCG | 1 cut(s) | 260 |
| Bsp143I | GATC | 3 cut(s) | 136, 301, 390 |
| BspACI | CCGC | 1 cut(s) | 260 |
| BspFNI | CGCG | 1 cut(s) | 260 |
| BspLI | GGNNCC | 2 cut(s) | 138, 202 |
| BspPI | GGATC | 3 cut(s) | 131, 144, 309 |
| BssMI | GATC | 3 cut(s) | 136, 301, 390 |
| Bst4CI | ACNGT | 2 cut(s) | 46, 121 |
| Bst6I | CTCTTC | 1 cut(s) | 369 |
| BstDEI | CTNAG | 1 cut(s) | 421 |
| BstF5I | GGATG | 4 cut(s) | 88, 268, 313, 415 |
| BstFNI | CGCG | 1 cut(s) | 260 |
| BstKTI | GATC | 3 cut(s) | 139, 304, 393 |
| BstMBI | GATC | 3 cut(s) | 136, 301, 390 |
| BstNSI | RCATGY | 1 cut(s) | 341 |
| BstUI | CGCG | 1 cut(s) | 260 |
| BstV1I | GCAGC | 1 cut(s) | 80 |
| BstX2I | RGATCY | 1 cut(s) | 136 |
| BstYI | RGATCY | 1 cut(s) | 136 |
| BtsCI | GGATG | 4 cut(s) | 88, 268, 313, 415 |
| BtsIMutI | CAGTG | 1 cut(s) | 117 |
| Cfr13I | GGNCC | 1 cut(s) | 25 |
| CseI | GACGC | 1 cut(s) | 266 |
| CviAII | CATG | 3 cut(s) | 169, 232, 338 |
| CviJI | RGCY | 6 cut(s) | 62, 93, 281, 312, 420, 458 |
| CviKI_1 | RGCY | 6 cut(s) | 62, 93, 281, 312, 420, 458 |
| DdeI | CTNAG | 1 cut(s) | 421 |
| DpnI | GATC | 3 cut(s) | 138, 303, 392 |
| DpnII | GATC | 3 cut(s) | 136, 301, 390 |
| Eam1104I | CTCTTC | 1 cut(s) | 369 |
| EarI | CTCTTC | 1 cut(s) | 369 |
| Eco47I | GGWCC | 1 cut(s) | 25 |
| EcoO109I | RGGNCCY | 1 cut(s) | 25 |
| FaeI | CATG | 3 cut(s) | 172, 235, 341 |
| FaiI | YATR | 4 cut(s) | 170, 206, 233, 339 |
| FatI | CATG | 3 cut(s) | 168, 231, 337 |
| FbaI | TGATCA | 1 cut(s) | 390 |
| Fnu4HI | GCNGC | 1 cut(s) | 94 |
| FokI | GGATG | 4 cut(s) | 95, 275, 320, 422 |
| Fsp4HI | GCNGC | 1 cut(s) | 94 |
| GluI | GCNGC | 1 cut(s) | 94 |
| HgaI | GACGC | 1 cut(s) | 266 |
| Hin1II | CATG | 3 cut(s) | 172, 235, 341 |
| HincII | GTYRAC | 1 cut(s) | 184 |
| HindII | GTYRAC | 1 cut(s) | 184 |
| HindIII | AAGCTT | 2 cut(s) | 60, 279 |
| HinfI | GANTC | 1 cut(s) | 226 |
| HphI | GGTGA | 2 cut(s) | 312, 425 |
| Hpy166II | GTNNAC | 1 cut(s) | 184 |
| Hpy188I | TCNGA | 1 cut(s) | 395 |
| Hpy188III | TCNNGA | 3 cut(s) | 56, 223, 305 |
| Hpy8I | GTNNAC | 1 cut(s) | 184 |
| HpyAV | CCTTC | 1 cut(s) | 241 |
| HpyCH4III | ACNGT | 2 cut(s) | 46, 121 |
| HpyCH4IV | ACGT | 1 cut(s) | 186 |
| HpyCH4V | TGCA | 2 cut(s) | 96, 163 |
| HpyF3I | CTNAG | 1 cut(s) | 421 |
| HpySE526I | ACGT | 1 cut(s) | 186 |
| Hsp92II | CATG | 3 cut(s) | 172, 235, 341 |
| Ksp22I | TGATCA | 1 cut(s) | 390 |
| Kzo9I | GATC | 3 cut(s) | 136, 301, 390 |
| LpnPI | CCDG | 3 cut(s) | 41, 290, 338 |
| Lsp1109I | GCAGC | 1 cut(s) | 80 |
| MaeII | ACGT | 1 cut(s) | 186 |
| MalI | GATC | 3 cut(s) | 138, 303, 392 |
| MboI | GATC | 3 cut(s) | 136, 301, 390 |
| MboII | GAAGA | 6 cut(s) | 47, 119, 164, 167, 386, 446 |
| MflI | RGATCY | 1 cut(s) | 136 |
| MluCI | AATT | 5 cut(s) | 128, 158, 269, 427, 437 |
| MmeI | TCCRAC | 1 cut(s) | 114 |
| MnlI | CCTC | 3 cut(s) | 16, 327, 370 |
| MseI | TTAA | 1 cut(s) | 126 |
| MvnI | CGCG | 1 cut(s) | 260 |
| NdeII | GATC | 3 cut(s) | 136, 301, 390 |
| NlaIII | CATG | 3 cut(s) | 172, 235, 341 |
| NlaIV | GGNNCC | 2 cut(s) | 138, 202 |
| NspI | RCATGY | 1 cut(s) | 341 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 264 |
| PfeI | GAWTC | 1 cut(s) | 226 |
| PkrI | GCNGC | 1 cut(s) | 95 |
| PpuMI | RGGWCCY | 1 cut(s) | 25 |
| Psp5II | RGGWCCY | 1 cut(s) | 25 |
| PspN4I | GGNNCC | 2 cut(s) | 138, 202 |
| PspPI | GGNCC | 1 cut(s) | 25 |
| PspPPI | RGGWCCY | 1 cut(s) | 25 |
| PsuI | RGATCY | 1 cut(s) | 136 |
| SaqAI | TTAA | 1 cut(s) | 126 |
| SatI | GCNGC | 1 cut(s) | 94 |
| Sau3AI | GATC | 3 cut(s) | 136, 301, 390 |
| Sau96I | GGNCC | 1 cut(s) | 25 |
| SetI | ASST | 7 cut(s) | 27, 64, 189, 283, 325, 381, 460 |
| SinI | GGWCC | 1 cut(s) | 25 |
| Sse9I | AATT | 5 cut(s) | 128, 158, 269, 427, 437 |
| SsiI | CCGC | 1 cut(s) | 260 |
| TaaI | ACNGT | 2 cut(s) | 46, 121 |
| TaiI | ACGT | 1 cut(s) | 189 |
| TasI | AATT | 5 cut(s) | 128, 158, 269, 427, 437 |
| TfiI | GAWTC | 1 cut(s) | 226 |
| Tru1I | TTAA | 1 cut(s) | 126 |
| Tru9I | TTAA | 1 cut(s) | 126 |
| TscAI | CASTG | 1 cut(s) | 124 |
| TseI | GCWGC | 1 cut(s) | 93 |
| TspDTI | ATGAA | 2 cut(s) | 260, 387 |
| TspGWI | ACGGA | 2 cut(s) | 164, 213 |
| TspRI | CASTG | 1 cut(s) | 124 |
| VpaK11BI | GGWCC | 1 cut(s) | 25 |
| XapI | RAATTY | 1 cut(s) | 437 |
| XceI | RCATGY | 1 cut(s) | 341 |