Costars family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G33640 |
| fragaria_vesca | FvH4_2g11550 |
| malus_domestica | MD05G1048500.v1.1 MD10G1054900.v1.1 |
| prunus_persica | Prupe.8G071000_v2.0.a1 |
| pyrus_communis | pycom05g04010 pycom10g04190 |
| rosa_chinensis | RchiOBHm_Chr6g0270691 |
| rosa_multiflora | Rmu_sc0000642.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00197680 |
| rosa_rugosa | Rorug06G0055900 |
| rosa_samantha | Rh6AG175100 Rh6BG178500 Rh6DG166900 |
| rosa_wichuraiana | Rw6G014920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 155 |
| AciI | CCGC | 4 cut(s) | 155, 166, 254, 257 |
| AcsI | RAATTY | 1 cut(s) | 170 |
| AfaI | GTAC | 1 cut(s) | 231 |
| AgsI | TTSAA | 1 cut(s) | 131 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 123, 155 |
| AluBI | AGCT | 2 cut(s) | 58, 193 |
| AluI | AGCT | 2 cut(s) | 58, 193 |
| Alw26I | GTCTC | 1 cut(s) | 32 |
| ApeKI | GCWGC | 4 cut(s) | 199, 248, 251, 269 |
| ApoI | RAATTY | 1 cut(s) | 170 |
| AsuHPI | GGTGA | 1 cut(s) | 200 |
| BbvI | GCAGC | 4 cut(s) | 186, 256, 260, 263 |
| BccI | CCATC | 2 cut(s) | 62, 179 |
| BcoDI | GTCTC | 1 cut(s) | 32 |
| BfmI | CTRYAG | 2 cut(s) | 200, 270 |
| BisI | GCNGC | 6 cut(s) | 156, 200, 249, 252, 255, 270 |
| BlsI | GCNGC | 6 cut(s) | 157, 201, 250, 253, 256, 271 |
| Bse118I | RCCGGY | 1 cut(s) | 244 |
| BseMII | CTCAG | 1 cut(s) | 43 |
| BseXI | GCAGC | 4 cut(s) | 186, 256, 260, 263 |
| BsiSI | CCGG | 1 cut(s) | 245 |
| BslFI | GGGAC | 1 cut(s) | 157 |
| BsmAI | GTCTC | 1 cut(s) | 32 |
| BsmBI | CGTCTC | 1 cut(s) | 32 |
| BsmFI | GGGAC | 1 cut(s) | 157 |
| Bsp143I | GATC | 1 cut(s) | 225 |
| BspACI | CCGC | 4 cut(s) | 155, 166, 254, 257 |
| BspCNI | CTCAG | 1 cut(s) | 42 |
| BspMAI | CTGCAG | 2 cut(s) | 204, 274 |
| BsrBI | CCGCTC | 1 cut(s) | 155 |
| BsrFI | RCCGGY | 1 cut(s) | 244 |
| BssAI | RCCGGY | 1 cut(s) | 244 |
| BssMI | GATC | 1 cut(s) | 225 |
| Bst6I | CTCTTC | 1 cut(s) | 9 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 269 |
| BstC8I | GCNNGC | 1 cut(s) | 56 |
| BstDEI | CTNAG | 2 cut(s) | 29, 149 |
| BstKTI | GATC | 1 cut(s) | 228 |
| BstMAI | GTCTC | 1 cut(s) | 32 |
| BstMBI | GATC | 1 cut(s) | 225 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 55, 199, 254, 260, 269 |
| BstSFI | CTRYAG | 2 cut(s) | 200, 270 |
| BstV1I | GCAGC | 4 cut(s) | 186, 256, 260, 263 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 50, 68 |
| Cac8I | GCNNGC | 1 cut(s) | 56 |
| Cfr10I | RCCGGY | 1 cut(s) | 244 |
| CseI | GACGC | 2 cut(s) | 14, 154 |
| Csp6I | GTAC | 1 cut(s) | 230 |
| CviJI | RGCY | 3 cut(s) | 49, 58, 193 |
| CviKI_1 | RGCY | 3 cut(s) | 49, 58, 193 |
| CviQI | GTAC | 1 cut(s) | 230 |
| DdeI | CTNAG | 2 cut(s) | 29, 149 |
| DpnI | GATC | 1 cut(s) | 227 |
| DpnII | GATC | 1 cut(s) | 225 |
| Eam1104I | CTCTTC | 1 cut(s) | 9 |
| EarI | CTCTTC | 1 cut(s) | 9 |
| EciI | GGCGGA | 2 cut(s) | 181, 272 |
| Esp3I | CGTCTC | 1 cut(s) | 32 |
| FaiI | YATR | 2 cut(s) | 125, 181 |
| FaqI | GGGAC | 1 cut(s) | 157 |
| Fnu4HI | GCNGC | 6 cut(s) | 156, 200, 249, 252, 255, 270 |
| Fsp4HI | GCNGC | 6 cut(s) | 156, 200, 249, 252, 255, 270 |
| GluI | GCNGC | 6 cut(s) | 156, 200, 249, 252, 255, 270 |
| HapII | CCGG | 1 cut(s) | 245 |
| HgaI | GACGC | 2 cut(s) | 14, 154 |
| HpaII | CCGG | 1 cut(s) | 245 |
| HphI | GGTGA | 1 cut(s) | 200 |
| Hpy166II | GTNNAC | 1 cut(s) | 211 |
| Hpy188I | TCNGA | 1 cut(s) | 32 |
| Hpy188III | TCNNGA | 1 cut(s) | 277 |
| Hpy8I | GTNNAC | 1 cut(s) | 211 |
| HpyCH4IV | ACGT | 1 cut(s) | 219 |
| HpyCH4V | TGCA | 3 cut(s) | 119, 202, 272 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 55, 199, 254, 260, 269 |
| HpyF3I | CTNAG | 2 cut(s) | 29, 149 |
| HpySE526I | ACGT | 1 cut(s) | 219 |
| Kzo9I | GATC | 1 cut(s) | 225 |
| LmnI | GCTCC | 1 cut(s) | 63 |
| LpnPI | CCDG | 2 cut(s) | 188, 258 |
| Lsp1109I | GCAGC | 4 cut(s) | 186, 256, 260, 263 |
| MaeII | ACGT | 1 cut(s) | 219 |
| MaeIII | GTNAC | 1 cut(s) | 82 |
| MalI | GATC | 1 cut(s) | 227 |
| MbiI | CCGCTC | 1 cut(s) | 155 |
| MboI | GATC | 1 cut(s) | 225 |
| MboII | GAAGA | 3 cut(s) | 23, 26, 47 |
| MluCI | AATT | 1 cut(s) | 170 |
| MnlI | CCTC | 3 cut(s) | 10, 156, 253 |
| MseI | TTAA | 1 cut(s) | 102 |
| MspA1I | CMGCKG | 1 cut(s) | 254 |
| MspI | CCGG | 1 cut(s) | 245 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 55, 199, 254, 260, 269 |
| NdeII | GATC | 1 cut(s) | 225 |
| NmuCI | GTSAC | 1 cut(s) | 82 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 225 |
| PkrI | GCNGC | 6 cut(s) | 157, 201, 250, 253, 256, 271 |
| PstI | CTGCAG | 2 cut(s) | 204, 274 |
| RsaI | GTAC | 1 cut(s) | 231 |
| RsaNI | GTAC | 1 cut(s) | 230 |
| SaqAI | TTAA | 1 cut(s) | 102 |
| SatI | GCNGC | 6 cut(s) | 156, 200, 249, 252, 255, 270 |
| Sau3AI | GATC | 1 cut(s) | 225 |
| SetI | ASST | 5 cut(s) | 21, 60, 84, 195, 222 |
| SfcI | CTRYAG | 2 cut(s) | 200, 270 |
| SgeI | CNNG | 9 cut(s) | 34, 62, 67, 74, 91, 215, 224, 232, 257 |
| Sse9I | AATT | 1 cut(s) | 170 |
| SsiI | CCGC | 4 cut(s) | 155, 166, 254, 257 |
| TaiI | ACGT | 1 cut(s) | 222 |
| TaqI | TCGA | 1 cut(s) | 21 |
| TasI | AATT | 1 cut(s) | 170 |
| TauI | GCSGC | 2 cut(s) | 158, 257 |
| Tru1I | TTAA | 1 cut(s) | 102 |
| Tru9I | TTAA | 1 cut(s) | 102 |
| TseFI | GTSAC | 1 cut(s) | 82 |
| TseI | GCWGC | 4 cut(s) | 199, 248, 251, 269 |
| Tsp45I | GTSAC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XapI | RAATTY | 1 cut(s) | 170 |