pycom05g05490

This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
6631138 .. 6635693
4556 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g05490.6

Sequence Viewer

Length: 1554 bp
ATGGATTCTTGCTGTGTGGCTTTGAAACCCAATACCCATTTGAGAAACGCAAGTGGTTTCTGCAATGGTGATCCTGGGTTTTTTGGGGAGAGTGTCAGAGGGAGTTTTAATCACAGGCTTTGGGCCAGTCAGTTGAGAACTGACAAGAGGAAGGTGAAACCTGGAGCTGTTCTTGCTGTTCTTACATCGAATGACACCGAGGCTGTCACTCTGCAAATGCCAATGTTTAGACGGAGAGTAGACCCGAAAAATGTAGCTTCAATTATATTAGGAGGCGGCGCAGGGACCCAGCTCTTTCCTCTTACCAAAAGATCAGCGACACCCGCGGTCCCAGTTGGAGGATGCTACCGGCTTATAGACATTCCAATGAGCAATTGTATCAACAGCAATATAAACAAGATATTTGTACTGACGCAGTTTAATTCTGCTTCTCTCAATCGTCACATTGCTCGCACCTATTTTGGAAATGGTATCAACTTTGGAGATAGATTTGTAGAGGTGCTTGCAGCCACTCAAACGCAGGGGGAAGCAGGAATGAATTGGTTCCAAGGAACGGCAGATGCTGTGAGGCAATTTACATGGGTATTTGAGGATGCCAAGAACAGGGATGTTGAGAATATAGTGATTTTGTCTGGCGATCATCTTTACCGAATGGATTATATGGACTTTGTGCAGAGTCACGTTGATAGAAATTCCGATATTACAATTTCTTGTGCAGCAGTGGGTGGCAGCCGCGCATCTGATTATGGGTTGGTGAAGATCGATAGCAGAGGTAAGGTAATCCAGTTTGCTGAAAAACCAAGGGGAGCTGATCTAAAAGCAATGCAAGCAGATACCACGCTTCTGGGATTGTCGCCACAAGATGCATTGAAAGCCCCCTATGTTGCATCAATGGGAGTTTATGTATTTAAGACAGAAATTTTGCTAAATCTTCTGAGGTGGAGATATCCAACATCCAATGACTTTGGATCTGAAATCATTCCTGCAGCAGTGAGAGAGCGCAAGGTCCAGGCATATATGTTCAGAGACTACTGGGAGGACATTGGAACTATAAAGTCTTTCTATGATGCTAACTTGGCCCTCACTGAAGAGATTCCGAAGTTTGAGTTTTATGACCCAAAGACACCAATCTTTACCTCTCCTCGATTCTTACCACCAACAAAGATTGACAAGTGCCGGATTGTGGATGCAATAATCTCACATGGATGTTTCTTGCAAGAATGTAGTGTCCAACATTCAATTGTGGGTGAACGTTCACGATTGAATTATGGTGTCGAACTCAAGGATGCCATAATGATGGGTGCCGACAATTACCAAACAGAATCTGAAATCGCATCTCTGCTTGCAGACGGGGAGGTCCCAATTGGTATTGGAAGCAATACAAAGATTAGGAATTGTATAATCGATAAGAATGCAAAGATAGGGAAGGACGTTATGATCGTGAACAAAGATGGGGTTCGAGAAGCTGACAGACCAGAAGACGGATTTTACATTCGCGAGGGGATCACAATTATTCTGGAGAAGGCAACAATAGAAGACGGCATGATTATATAA

Protein Analysis

518

Amino Acids

57.41

Weight (kDa)

6.68

Isoelectric Point (pI)

35.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1355
AccB1I GGYRCC 1 cut(s) 1301
AccI GTMKAC 1 cut(s) 240
AccII CGCG 3 cut(s) 326, 735, 1497
AciI CCGC 4 cut(s) 276, 324, 326, 733
AclI AACGTT 1 cut(s) 1252
AclWI GGATC 3 cut(s) 65, 976, 1511
AcsI RAATTY 2 cut(s) 691, 918
AcuI CTGAAG 1 cut(s) 1107
AfaI GTAC 1 cut(s) 408
AfiI CCNNNNNNNGG 5 cut(s) 338, 553, 603, 1183, 1481
AgsI TTSAA 5 cut(s) 25, 261, 871, 1239, 1264
AjnI CCWGG 3 cut(s) 73, 160, 1008
AluBI AGCT 5 cut(s) 167, 257, 292, 809, 1466
AluI AGCT 5 cut(s) 167, 257, 292, 809, 1466
Alw26I GTCTC 1 cut(s) 1020
AlwI GGATC 3 cut(s) 65, 976, 1511
AlwNI CAGNNNCTG 2 cut(s) 563, 1325
AoxI GGCC 2 cut(s) 123, 1077
ApeKI GCWGC 4 cut(s) 506, 716, 729, 986
ApoI RAATTY 2 cut(s) 691, 918
ArsI GACNNNNNNTTYG 2 cut(s) 904, 936
Asp700I GAANNNNTTC 3 cut(s) 542, 978, 1092
AspLEI GCGC 3 cut(s) 281, 737, 1002
AspS9I GGNCC 6 cut(s) 123, 285, 328, 1006, 1078, 1357
AsuHPI GGTGA 4 cut(s) 80, 166, 766, 1259
AvaII GGWCC 4 cut(s) 285, 328, 1006, 1357
BanI GGYRCC 1 cut(s) 1301
BbsI GAAGAC 2 cut(s) 1485, 1542
BbvI GCAGC 4 cut(s) 518, 728, 741, 998
BccI CCATC 2 cut(s) 1291, 1445
BceAI ACGGC 1 cut(s) 570
BcgI CGANNNNNNTGC 2 cut(s) 1394, 1428
BciT130I CCWGG 3 cut(s) 75, 162, 1010
BcoDI GTCTC 1 cut(s) 1020
BfmI CTRYAG 1 cut(s) 984
BisI GCNGC 6 cut(s) 277, 507, 717, 730, 733, 987
BlsI GCNGC 6 cut(s) 278, 508, 718, 731, 734, 988
Bme1390I CCNGG 3 cut(s) 75, 162, 1010
Bme18I GGWCC 4 cut(s) 285, 328, 1006, 1357
BmgT120I GGNCC 6 cut(s) 123, 285, 328, 1006, 1078, 1357
BmiI GGNNCC 6 cut(s) 286, 287, 330, 545, 1303, 1359
BmrFI CCNGG 3 cut(s) 75, 162, 1010
BmrI ACTGGG 2 cut(s) 326, 1042
BmuI ACTGGG 2 cut(s) 326, 1042
BpiI GAAGAC 2 cut(s) 1485, 1542
BpmI CTGGAG 2 cut(s) 183, 1538
BpuEI CTTGAG 1 cut(s) 1265
Bsa29I ATCGAT 2 cut(s) 762, 1404
BsaJI CCNNGG 5 cut(s) 74, 198, 324, 547, 800
BsaXI ACNNNNNCTCC 2 cut(s) 888, 918
Bsc4I CCNNNNNNNGG 5 cut(s) 338, 553, 603, 1183, 1481
Bse118I RCCGGY 1 cut(s) 348
Bse1I ACTGG 4 cut(s) 126, 332, 784, 1037
Bse3DI GCAATG 3 cut(s) 70, 444, 828
BseBI CCWGG 3 cut(s) 75, 162, 1010
BseCI ATCGAT 2 cut(s) 762, 1404
BseDI CCNNGG 5 cut(s) 74, 198, 324, 547, 800
BseGI GGATG 7 cut(s) 347, 598, 613, 953, 1192, 1211, 1291
BseLI CCNNNNNNNGG 5 cut(s) 338, 553, 603, 1183, 1481
BseMI GCAATG 3 cut(s) 70, 444, 828
BseMII CTCAG 1 cut(s) 926
BseNI ACTGG 4 cut(s) 126, 332, 784, 1037
BseRI GAGGAG 1 cut(s) 1131
BseXI GCAGC 4 cut(s) 518, 728, 741, 998
BseYI CCCAGC 1 cut(s) 288
BsgI GTGCAG 2 cut(s) 692, 735
Bsh1236I CGCG 3 cut(s) 326, 735, 1497
BshFI GGCC 2 cut(s) 125, 1079
BshNI GGYRCC 1 cut(s) 1301
BshVI ATCGAT 2 cut(s) 762, 1404
BsiSI CCGG 2 cut(s) 349, 1177
BslFI GGGAC 3 cut(s) 298, 314, 1343
BslI CCNNNNNNNGG 5 cut(s) 338, 553, 603, 1183, 1481
BsmAI GTCTC 1 cut(s) 1020
BsmFI GGGAC 3 cut(s) 298, 314, 1343
BsmI GAATGC 1 cut(s) 1417
BsnI GGCC 2 cut(s) 125, 1079
Bsp143I GATC 8 cut(s) 70, 311, 637, 759, 811, 968, 1437, 1503
Bsp68I TCGCGA 1 cut(s) 1497
BspACI CCGC 4 cut(s) 276, 324, 326, 733
BspANI GGCC 2 cut(s) 125, 1079
BspCNI CTCAG 1 cut(s) 927
BspDI ATCGAT 2 cut(s) 762, 1404
BspFNI CGCG 3 cut(s) 326, 735, 1497
BspLI GGNNCC 6 cut(s) 286, 287, 330, 545, 1303, 1359
BspMAI CTGCAG 1 cut(s) 988
BspPI GGATC 3 cut(s) 65, 976, 1511
BspT107I GGYRCC 1 cut(s) 1301
BsrDI GCAATG 3 cut(s) 70, 444, 828
BsrFI RCCGGY 1 cut(s) 348
BsrI ACTGG 4 cut(s) 126, 332, 784, 1037
BssAI RCCGGY 1 cut(s) 348
BssECI CCNNGG 5 cut(s) 74, 198, 324, 547, 800
BssMI GATC 8 cut(s) 70, 311, 637, 759, 811, 968, 1437, 1503
BssT1I CCWWGG 2 cut(s) 547, 800
Bst2UI CCWGG 3 cut(s) 75, 162, 1010
Bst6I CTCTTC 1 cut(s) 1083
BstC8I GCNNGC 4 cut(s) 451, 504, 828, 1344
BstDEI CTNAG 1 cut(s) 935
BstDSI CCRYGG 1 cut(s) 324
BstF5I GGATG 7 cut(s) 347, 598, 613, 953, 1192, 1211, 1291
BstFNI CGCG 3 cut(s) 326, 735, 1497
BstHHI GCGC 3 cut(s) 281, 737, 1002
BstKTI GATC 8 cut(s) 73, 314, 640, 762, 814, 971, 1440, 1506
BstMAI GTCTC 1 cut(s) 1020
BstMBI GATC 8 cut(s) 70, 311, 637, 759, 811, 968, 1437, 1503
BstMWI GCNNNNNNNGC 5 cut(s) 173, 323, 827, 872, 1076
BstNI CCWGG 3 cut(s) 75, 162, 1010
BstSCI CCNGG 3 cut(s) 73, 160, 1008
BstSFI CTRYAG 1 cut(s) 984
BstUI CGCG 3 cut(s) 326, 735, 1497
BstV1I GCAGC 4 cut(s) 518, 728, 741, 998
BstV2I GAAGAC 2 cut(s) 1485, 1542
BstX2I RGATCY 1 cut(s) 968
BstXI CCANNNNNNTGG 2 cut(s) 844, 1297
BstYI RGATCY 1 cut(s) 968
Bsu15I ATCGAT 2 cut(s) 762, 1404
BsuRI GGCC 2 cut(s) 125, 1079
BsuTUI ATCGAT 2 cut(s) 762, 1404
BtgI CCRYGG 1 cut(s) 324
BtsCI GGATG 7 cut(s) 347, 598, 613, 953, 1192, 1211, 1291
BtsI GCAGTG 2 cut(s) 726, 996
BtsIMutI CAGTG 3 cut(s) 726, 996, 1083
BtuMI TCGCGA 1 cut(s) 1497
Cac8I GCNNGC 4 cut(s) 451, 504, 828, 1344
CaiI CAGNNNCTG 2 cut(s) 563, 1325
CfoI GCGC 3 cut(s) 281, 737, 1002
Cfr10I RCCGGY 1 cut(s) 348
Cfr13I GGNCC 6 cut(s) 123, 285, 328, 1006, 1078, 1357
Cfr42I CCGCGG 1 cut(s) 327
ClaI ATCGAT 2 cut(s) 762, 1404
CseI GACGC 1 cut(s) 421
Csp6I GTAC 1 cut(s) 407
CviAII CATG 3 cut(s) 579, 1202, 1543
CviQI GTAC 1 cut(s) 407
DdeI CTNAG 1 cut(s) 935
DpnI GATC 8 cut(s) 72, 313, 639, 761, 813, 970, 1439, 1505
DpnII GATC 8 cut(s) 70, 311, 637, 759, 811, 968, 1437, 1503
DrdI GACNNNNNNGTC 1 cut(s) 1355
DseDI GACNNNNNNGTC 1 cut(s) 1355
Eam1104I CTCTTC 1 cut(s) 1083
EarI CTCTTC 1 cut(s) 1083
Eco130I CCWWGG 2 cut(s) 547, 800
Eco32I GATATC 1 cut(s) 947
Eco47I GGWCC 4 cut(s) 285, 328, 1006, 1357
Eco57I CTGAAG 1 cut(s) 1107
EcoO109I RGGNCCY 2 cut(s) 285, 1357
EcoRII CCWGG 3 cut(s) 73, 160, 1008
EcoRV GATATC 1 cut(s) 947
EcoT14I CCWWGG 2 cut(s) 547, 800
EcoT22I ATGCAT 1 cut(s) 868
ErhI CCWWGG 2 cut(s) 547, 800
FaeI CATG 3 cut(s) 582, 1205, 1546
FaqI GGGAC 3 cut(s) 298, 314, 1343
FatI CATG 3 cut(s) 578, 1201, 1542
FauI CCCGC 1 cut(s) 331
FblI GTMKAC 1 cut(s) 240
Fnu4HI GCNGC 6 cut(s) 277, 507, 717, 730, 733, 987
FokI GGATG 7 cut(s) 354, 605, 620, 940, 1199, 1218, 1298
Fsp4HI GCNGC 6 cut(s) 277, 507, 717, 730, 733, 987
GlaI GCGC 3 cut(s) 280, 736, 1001
GluI GCNGC 6 cut(s) 277, 507, 717, 730, 733, 987
GsaI CCCAGC 1 cut(s) 292
GsuI CTGGAG 2 cut(s) 183, 1538
HaeIII GGCC 2 cut(s) 125, 1079
HapII CCGG 2 cut(s) 349, 1177
HgaI GACGC 1 cut(s) 421
HhaI GCGC 3 cut(s) 281, 737, 1002
Hin1II CATG 3 cut(s) 582, 1205, 1546
Hin6I GCGC 3 cut(s) 279, 735, 1000
HinP1I GCGC 3 cut(s) 279, 735, 1000
HinfI GANTC 5 cut(s) 5, 676, 1093, 1146, 1322
HpaII CCGG 2 cut(s) 349, 1177
HphI GGTGA 4 cut(s) 80, 166, 766, 1259
Hpy166II GTNNAC 4 cut(s) 241, 1250, 1256, 1444
Hpy188I TCNGA 8 cut(s) 98, 697, 742, 936, 973, 1025, 1098, 1327
Hpy188III TCNNGA 5 cut(s) 1257, 1441, 1460, 1496, 1517
Hpy8I GTNNAC 4 cut(s) 241, 1250, 1256, 1444
HpyAV CCTTC 3 cut(s) 145, 1420, 1516
HpyCH4IV ACGT 3 cut(s) 681, 1252, 1431
HpyF10VI GCNNNNNNNGC 5 cut(s) 173, 323, 827, 872, 1076
HpyF3I CTNAG 1 cut(s) 935
HpySE526I ACGT 3 cut(s) 681, 1252, 1431
Hsp92II CATG 3 cut(s) 582, 1205, 1546
HspAI GCGC 3 cut(s) 279, 735, 1000
KflI GGGWCCC 1 cut(s) 285
KspI CCGCGG 1 cut(s) 327
Kzo9I GATC 8 cut(s) 70, 311, 637, 759, 811, 968, 1437, 1503
LmnI GCTCC 2 cut(s) 164, 806
Lsp1109I GCAGC 4 cut(s) 518, 728, 741, 998
MaeII ACGT 3 cut(s) 681, 1252, 1431
MaeIII GTNAC 3 cut(s) 205, 440, 677
MalI GATC 8 cut(s) 72, 313, 639, 761, 813, 970, 1439, 1505
MboI GATC 8 cut(s) 70, 311, 637, 759, 811, 968, 1437, 1503
MboII GAAGA 5 cut(s) 769, 923, 1100, 1490, 1547
MfeI CAATTG 3 cut(s) 373, 1239, 1362
MflI RGATCY 1 cut(s) 968
MlyI GAGTC 1 cut(s) 685
MmeI TCCRAC 3 cut(s) 316, 974, 1255
Mph1103I ATGCAT 1 cut(s) 868
MroXI GAANNNNTTC 3 cut(s) 542, 978, 1092
MseI TTAA 3 cut(s) 108, 420, 909
MslI CAYNNNNRTG 3 cut(s) 365, 1204, 1295
MspA1I CMGCKG 1 cut(s) 326
MspI CCGG 2 cut(s) 349, 1177
MspR9I CCNGG 3 cut(s) 75, 162, 1010
MunI CAATTG 3 cut(s) 373, 1239, 1362
Mva1269I GAATGC 1 cut(s) 1417
MvaI CCWGG 3 cut(s) 75, 162, 1010
MvnI CGCG 3 cut(s) 326, 735, 1497
MwoI GCNNNNNNNGC 5 cut(s) 173, 323, 827, 872, 1076
NdeII GATC 8 cut(s) 70, 311, 637, 759, 811, 968, 1437, 1503
NlaIII CATG 3 cut(s) 582, 1205, 1546
NlaIV GGNNCC 6 cut(s) 286, 287, 330, 545, 1303, 1359
NmuCI GTSAC 3 cut(s) 205, 440, 677
NruI TCGCGA 1 cut(s) 1497
NsiI ATGCAT 1 cut(s) 868
PcsI WCGNNNNNNNCGW 1 cut(s) 1437
PctI GAATGC 1 cut(s) 1417
PdmI GAANNNNTTC 3 cut(s) 542, 978, 1092
PfeI GAWTC 4 cut(s) 5, 1093, 1146, 1322
PkrI GCNGC 6 cut(s) 278, 508, 718, 731, 734, 988
PleI GAGTC 1 cut(s) 684
PpsI GAGTC 1 cut(s) 684
PpuMI RGGWCCY 2 cut(s) 285, 1357
Psp1406I AACGTT 1 cut(s) 1252
Psp5II RGGWCCY 2 cut(s) 285, 1357
Psp6I CCWGG 3 cut(s) 73, 160, 1008
PspFI CCCAGC 1 cut(s) 288
PspGI CCWGG 3 cut(s) 73, 160, 1008
PspN4I GGNNCC 6 cut(s) 286, 287, 330, 545, 1303, 1359
PspPI GGNCC 6 cut(s) 123, 285, 328, 1006, 1078, 1357
PspPPI RGGWCCY 2 cut(s) 285, 1357
PstI CTGCAG 1 cut(s) 988
PstNI CAGNNNCTG 2 cut(s) 563, 1325
PsuI RGATCY 1 cut(s) 968
RruI TCGCGA 1 cut(s) 1497
RsaI GTAC 1 cut(s) 408
RsaNI GTAC 1 cut(s) 407
RseI CAYNNNNRTG 3 cut(s) 365, 1204, 1295
SacII CCGCGG 1 cut(s) 327
SaqAI TTAA 3 cut(s) 108, 420, 909
SatI GCNGC 6 cut(s) 277, 507, 717, 730, 733, 987
Sau3AI GATC 8 cut(s) 70, 311, 637, 759, 811, 968, 1437, 1503
Sau96I GGNCC 6 cut(s) 123, 285, 328, 1006, 1078, 1357
SchI GAGTC 1 cut(s) 685
ScrFI CCNGG 3 cut(s) 75, 162, 1010
SfcI CTRYAG 1 cut(s) 984
Sfr303I CCGCGG 1 cut(s) 327
SgrBI CCGCGG 1 cut(s) 327
SinI GGWCC 4 cut(s) 285, 328, 1006, 1357
SmiMI CAYNNNNRTG 3 cut(s) 365, 1204, 1295
SmlI CTYRAG 1 cut(s) 1280
SmoI CTYRAG 1 cut(s) 1280
SsiI CCGC 4 cut(s) 276, 324, 326, 733
StyD4I CCNGG 3 cut(s) 73, 160, 1008
StyI CCWWGG 2 cut(s) 547, 800
TaiI ACGT 3 cut(s) 684, 1255, 1434
TaqI TCGA 6 cut(s) 188, 762, 1144, 1275, 1404, 1459
TatI WGTACW 1 cut(s) 406
TauI GCSGC 2 cut(s) 279, 735
TfiI GAWTC 4 cut(s) 5, 1093, 1146, 1322
Tru1I TTAA 3 cut(s) 108, 420, 909
Tru9I TTAA 3 cut(s) 108, 420, 909
TscAI CASTG 3 cut(s) 726, 996, 1090
TseFI GTSAC 3 cut(s) 205, 440, 677
TseI GCWGC 4 cut(s) 506, 716, 729, 986
Tsp45I GTSAC 3 cut(s) 205, 440, 677
TspDTI ATGAA 1 cut(s) 551
TspGWI ACGGA 2 cut(s) 247, 1497
TspRI CASTG 3 cut(s) 726, 996, 1090
VpaK11BI GGWCC 4 cut(s) 285, 328, 1006, 1357
XapI RAATTY 2 cut(s) 691, 918
XmiI GTMKAC 1 cut(s) 240
XmnI GAANNNNTTC 3 cut(s) 542, 978, 1092
Zsp2I ATGCAT 1 cut(s) 868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.