Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0009783

Physical Location & Seq

Genomic Coordinates Reverse (-)

15909763 .. 15914158

Gene Structure 4396 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g12480.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGAAAATGCCGTGTGTCGCGTCAGAATTCACGGGCTTTCCCGCTCATTCCAGCCGTGCAGATTGCACAAGAGGAAAAACTTTTACGCGGTTAAGGCGCGGCGCCACCCAAGTCCCAACTAGACATGGGCAATACAGTCAATTCACTAACCCAAATATGCAAATTTTCATACGTGTTGCCCATTGGTCCACATCGTTATTTGCCATGTGGGCCCTCCACCGCTATGAGTGTGTATTTGTTTTCTTCTGTAACCTTCTCTGTAATTGCACTGGGCTCTCGAGCACTCATCTTCTCCCCCCGTTGTTTCTTCTTCGATTTCTCTTTTCGATCACCACCACCTTCTCCCAAATGCTGCTCAAGTTTCTAGCTGCAGTTGTTTTGGTTCTGGGTCTTGTCAGTGCCGAGGACCCTTACCGATACTTCGACTGGAACGTAACATATGGTGACATATATCCCCTCGGTGGTGCTCGTCAACAGGGAATTCTTATTAATGGTCAGTTTCCGGGGCCGGAAATCTATTCTGTAACCAATGACAACCTCATTATCAACGTCCACAACAGCTTGCCGGAGCCTTTCCTTATTTCATGGAATGGAGTGCAACAAAGGAGAAACTCATACCAAGATGGAGTGTATGGAACCACATGCCCAATCCCACCAGGCAAGAACTTCACCTTCACACTACAAGTGAAGGACCAAATTGGAAGCTTTTACTACTTCCCATCTCTTGCCTTCCAGAAAGCTGCCGGTGGCTTTGGAGCCATTAAAATCCTCAGCAGGCCCAGAATCCCAGTCCCATTCCCAGAACCAGCTGGGGATTACTCCATTCTGATTGGAGATTGGTACAAAACTGATCACAAGGTATTAAAGGCCATTCTAGATCGCGGTCACAGGCTTCCCTTCCCAGATGGTGTTCTAATCAATGGACGTGGACCAAGTGGTACAACTTTCACATTTGAACAAGGTAAAACCTACAGGCTTAGAATATCAAATGTTGGGCTCCAGAACTCTCTGAACTTCAGAATCCAGGGACACACATTGAAGCTGGTTGAGGTTGAAGGAACGCACACTCTCCAGACCACTTACGAGTCACTTGATATCCACGTGGGACAGTCCTACTCTGTGCTCGTCACAGCAGATCAGGCCCCTCAGGACTACTACATTGCTGTGTCAACTCGTTTCACCAGCAAGGTCCTCACCAGCACTGCAATTTTTCACTACGGTAACTCCGCCCGTCAAGTTTCCGGCCCAATTCCTGGTGGCCCCACCCAAACTGGCTGGTCTCTTAGCCAGGCCCGCTCCATTAGGACTAATTTGACAGCAAGTGGACCAAGACCAAACCCACAAGGCTCCTACCACTATGGTCTTGTGAATGTGAGCAGAACAATCATGCTACAGAGCTCAGCAGCTCAAGTAAGTGGGAAGCAAAGATATGCAGTGAACAGTGTATCTTTCATCCCTGCTGACACACCATTGAAGCTTGCGGATTACTTCAAGATTGATGGAGTTTTTAAGGTTGGAAGCATCTCAGATTATCCCACTCACCAAAACATGTACCTTGACACTTCAGTCATGGGTGCTGATTTTAGGGCTTTTGTTGAGATTGTGTTTGAGAACAAGGAAAACATTGTGCAAAGTTTTCACTTGGATGGTTACTCCTTCTGGGTTGTTGGAATGGATGGAGGTAAATGGACACCAGCCAGTCGGAACGAATACAACCTTAGAGATGCAGTTTCAAGAAGTACCACACAGGTGTATCCAAAGTCATGGACTGCAATATACATTGCTTTCGACAATGTTGGTATGTGGAATGTGAGGAGTGAGTTTTGGGCGAGGCAATACCTTGGACAACAATTTTACCTACGAGTTTACTCGCCTGTGGAGTCAACTAGGGATGAGTACCCAATTCCCAGAAATGCCCTTCTTTGTGGTAGGGCTGCTGGCAGAACAACCAGACCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

653

Amino Acids

73.17

Weight (kDa)

9.38

Isoelectric Point (pI)

36.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28090 AT4G38420 AT4G38420 AT4G38420
fragaria_vesca	FvH4_2g16000
malus_domestica	MD05G1128800.v1.1 MD10G1132000.v1.1
prunus_persica	Prupe.8G172900_v2.0.a1
pyrus_communis	pycom05g12480 pycom10g11310
rosa_chinensis	RchiOBHm_Chr6g0279531
rosa_laevigata	RLG00000013138
rosa_multiflora	Rmu_co8258861.1_g000001 Rmu_sc0004644.1_g000011 Rmu_sc0004649.1_g000018 Rmu_sc0040022.1_g000001
rosa_roxburghii	Rroxscaffold_7G00188830
rosa_rugosa	Rorug06G0125300
rosa_samantha	Rh6BG238700 Rh6DG232200
rosa_wichuraiana	Rw6G020450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1565
AccB1I	GGYRCC	1 cut(s)	101
AccB7I	CCANNNNNTGG	1 cut(s)	1253
AccBSI	CCGCTC	2 cut(s)	44, 1296
AccII	CGCG	4 cut(s)	20, 88, 99, 882
AciI	CCGC	8 cut(s)	42, 88, 99, 220, 882, 1227, 1294, 1481
AcsI	RAATTY	3 cut(s)	26, 162, 480
AcuI	CTGAAG	2 cut(s)	1000, 1548
AcvI	CACGTG	1 cut(s)	1102
AcyI	GRCGYC	1 cut(s)	102
AfaI	GTAC	5 cut(s)	842, 940, 1553, 1741, 1898
AfiI	CCNNNNNNNGG	2 cut(s)	461, 1253
AflIII	ACRYGT	2 cut(s)	172, 1548
AgsI	TTSAA	6 cut(s)	956, 1039, 1055, 1474, 1492, 1734
AjiI	CACGTC	1 cut(s)	926
AjnI	CCWGG	4 cut(s)	655, 1023, 1252, 1287
AleI	CACNNNNGTG	1 cut(s)	1748
AluBI	AGCT	9 cut(s)	368, 561, 705, 740, 809, 1042, 1398, 1406, 1477
AluI	AGCT	9 cut(s)	368, 561, 705, 740, 809, 1042, 1398, 1406, 1477
Alw21I	GWGCWC	4 cut(s)	284, 469, 1125, 1400
Alw26I	GTCTC	1 cut(s)	1284
Ama87I	CYCGRG	1 cut(s)	277
AoxI	GGCC	8 cut(s)	210, 506, 776, 867, 1140, 1243, 1258, 1290
ApaI	GGGCCC	1 cut(s)	214
ApeKI	GCWGC	5 cut(s)	352, 368, 740, 1403, 1934
ApoI	RAATTY	3 cut(s)	26, 162, 480
AseI	ATTAAT	1 cut(s)	489
AspLEI	GCGC	2 cut(s)	99, 104
AsuC2I	CCSGG	1 cut(s)	504
AsuHPI	GGTGA	6 cut(s)	322, 455, 661, 1171, 1186, 1532
AvaI	CYCGRG	1 cut(s)	277
AvaII	GGWCC	6 cut(s)	186, 406, 691, 929, 1189, 1325
AxyI	CCTNAGG	1 cut(s)	1146
BaeGI	GKGCMC	1 cut(s)	214
BaeI	ACNNNNGTAYC	2 cut(s)	1736, 1769
BanI	GGYRCC	1 cut(s)	101
BanII	GRGCYC	4 cut(s)	214, 276, 999, 1400
BbrPI	CACGTG	1 cut(s)	1102
Bbv12I	GWGCWC	4 cut(s)	284, 469, 1125, 1400
BbvCI	CCTCAGC	1 cut(s)	770
BbvI	GCAGC	5 cut(s)	339, 355, 727, 1415, 1921
BccI	CCATC	6 cut(s)	617, 727, 899, 1493, 1640, 1670
BceAI	ACGGC	1 cut(s)	39
BciT130I	CCWGG	4 cut(s)	657, 1025, 1254, 1289
BciVI	GTATCC	1 cut(s)	1764
BclI	TGATCA	1 cut(s)	850
BcnI	CCSGG	1 cut(s)	504
BcoDI	GTCTC	1 cut(s)	1284
BfaI	CTAG	4 cut(s)	120, 365, 875, 1887
BfmI	CTRYAG	3 cut(s)	369, 970, 1391
BfoI	RGCGCY	1 cut(s)	105
BfuI	GTATCC	1 cut(s)	1764
BglI	GCCNNNNNGGC	1 cut(s)	209
BisI	GCNGC	6 cut(s)	100, 353, 369, 741, 1404, 1935
BlpI	GCTNAGC	1 cut(s)	1399
BlsI	GCNGC	6 cut(s)	101, 354, 370, 742, 1405, 1936
Bme1390I	CCNGG	5 cut(s)	504, 657, 1025, 1254, 1289
Bme18I	GGWCC	6 cut(s)	186, 406, 691, 929, 1189, 1325
BmeT110I	CYCGRG	1 cut(s)	277
BmgBI	CACGTC	1 cut(s)	926
BmrFI	CCNGG	5 cut(s)	504, 657, 1025, 1254, 1289
BmrI	ACTGGG	2 cut(s)	279, 782
BmsI	GCATC	2 cut(s)	1530, 1714
BmuI	ACTGGG	2 cut(s)	279, 782
BpmI	CTGGAG	2 cut(s)	983, 1055
Bpu10I	CCTNAGC	1 cut(s)	770
Bpu1102I	GCTNAGC	1 cut(s)	1399
BpuEI	CTTGAG	2 cut(s)	341, 1392
BpuMI	CCSGG	1 cut(s)	504
BsaAI	YACGTR	2 cut(s)	173, 1102
BsaHI	GRCGYC	1 cut(s)	102
BsaI	GGTCTC	1 cut(s)	1284
BsaJI	CCNNGG	5 cut(s)	402, 457, 503, 1024, 1840
BsaXI	ACNNNNNCTCC	2 cut(s)	1208, 1238
Bsc4I	CCNNNNNNNGG	2 cut(s)	461, 1253
Bse118I	RCCGGY	1 cut(s)	743
Bse1I	ACTGG	5 cut(s)	274, 431, 788, 1276, 1698
Bse21I	CCTNAGG	1 cut(s)	1146
Bse3DI	GCAATG	2 cut(s)	1158, 1779
BseBI	CCWGG	4 cut(s)	657, 1025, 1254, 1289
BseDI	CCNNGG	5 cut(s)	402, 457, 503, 1024, 1840
BseGI	GGATG	4 cut(s)	1452, 1651, 1681, 1897
BseLI	CCNNNNNNNGG	2 cut(s)	461, 1253
BseMI	GCAATG	2 cut(s)	1158, 1779
BseMII	CTCAG	4 cut(s)	784, 1160, 1413, 1539
BseNI	ACTGG	5 cut(s)	274, 431, 788, 1276, 1698
BseRI	GAGGAG	1 cut(s)	1828
BseSI	GKGCMC	1 cut(s)	214
BseXI	GCAGC	5 cut(s)	339, 355, 727, 1415, 1921
BseYI	CCCAGC	1 cut(s)	809
BsgI	GTGCAG	1 cut(s)	78
Bsh1236I	CGCG	4 cut(s)	20, 88, 99, 882
BshFI	GGCC	8 cut(s)	212, 508, 778, 869, 1142, 1245, 1260, 1292
BshNI	GGYRCC	1 cut(s)	101
BsiHKAI	GWGCWC	4 cut(s)	284, 469, 1125, 1400
BsiHKCI	CYCGRG	1 cut(s)	277
BsiSI	CCGG	5 cut(s)	503, 509, 566, 744, 1242
BslFI	GGGAC	4 cut(s)	98, 776, 1041, 1119
BslI	CCNNNNNNNGG	2 cut(s)	461, 1253
BsmAI	GTCTC	1 cut(s)	1284
BsmFI	GGGAC	4 cut(s)	98, 776, 1041, 1119
BsnI	GGCC	8 cut(s)	212, 508, 778, 869, 1142, 1245, 1260, 1292
Bso31I	GGTCTC	1 cut(s)	1284
BsoBI	CYCGRG	1 cut(s)	277
Bsp120I	GGGCCC	1 cut(s)	210
Bsp1286I	GDGCHC	7 cut(s)	214, 276, 284, 469, 999, 1125, 1400
Bsp143I	GATC	4 cut(s)	327, 850, 877, 1135
Bsp1720I	GCTNAGC	1 cut(s)	1399
BspACI	CCGC	8 cut(s)	42, 88, 99, 220, 882, 1227, 1294, 1481
BspANI	GGCC	8 cut(s)	212, 508, 778, 869, 1142, 1245, 1260, 1292
BspCNI	CTCAG	4 cut(s)	783, 1159, 1412, 1538
BspFNI	CGCG	4 cut(s)	20, 88, 99, 882
BspMAI	CTGCAG	1 cut(s)	373
BspT107I	GGYRCC	1 cut(s)	101
BspTNI	GGTCTC	1 cut(s)	1284
BsrBI	CCGCTC	2 cut(s)	44, 1296
BsrDI	GCAATG	2 cut(s)	1158, 1779
BsrFI	RCCGGY	1 cut(s)	743
BsrI	ACTGG	5 cut(s)	274, 431, 788, 1276, 1698
BssAI	RCCGGY	1 cut(s)	743
BssECI	CCNNGG	5 cut(s)	402, 457, 503, 1024, 1840
BssMI	GATC	4 cut(s)	327, 850, 877, 1135
BssNI	GRCGYC	1 cut(s)	102
BssT1I	CCWWGG	1 cut(s)	1840
Bst2UI	CCWGG	4 cut(s)	657, 1025, 1254, 1289
Bst4CI	ACNGT	4 cut(s)	137, 1110, 1220, 1442
BstACI	GRCGYC	1 cut(s)	102
BstBAI	YACGTR	2 cut(s)	173, 1102
BstC8I	GCNNGC	5 cut(s)	563, 776, 1294, 1479, 1939
BstDEI	CTNAG	7 cut(s)	770, 977, 1146, 1283, 1399, 1525, 1718
BstF5I	GGATG	4 cut(s)	1452, 1651, 1681, 1897
BstFNI	CGCG	4 cut(s)	20, 88, 99, 882
BstH2I	RGCGCY	1 cut(s)	105
BstHHI	GCGC	2 cut(s)	99, 104
BstKTI	GATC	4 cut(s)	330, 853, 880, 1138
BstMAI	GTCTC	1 cut(s)	1284
BstMBI	GATC	4 cut(s)	327, 850, 877, 1135
BstMWI	GCNNNNNNNGC	4 cut(s)	94, 209, 1139, 1293
BstNI	CCWGG	4 cut(s)	657, 1025, 1254, 1289
BstNSI	RCATGY	2 cut(s)	645, 1552
BstSCI	CCNGG	5 cut(s)	502, 655, 1023, 1252, 1287
BstSFI	CTRYAG	3 cut(s)	369, 970, 1391
BstSLI	GKGCMC	1 cut(s)	214
BstUI	CGCG	4 cut(s)	20, 88, 99, 882
BstV1I	GCAGC	5 cut(s)	339, 355, 727, 1415, 1921
BstXI	CCANNNNNNTGG	1 cut(s)	1764
Bsu36I	CCTNAGG	1 cut(s)	1146
BsuI	GTATCC	1 cut(s)	1764
BsuRI	GGCC	8 cut(s)	212, 508, 778, 869, 1142, 1245, 1260, 1292
BtrI	CACGTC	1 cut(s)	926
BtsCI	GGATG	4 cut(s)	1452, 1651, 1681, 1897
BtsI	GCAGTG	2 cut(s)	1200, 1440
BtsIMutI	CAGTG	5 cut(s)	267, 403, 1200, 1440, 1447
Cac8I	GCNNGC	5 cut(s)	563, 776, 1294, 1479, 1939
CfoI	GCGC	2 cut(s)	99, 104
Cfr10I	RCCGGY	1 cut(s)	743
CseI	GACGC	1 cut(s)	9
Csp6I	GTAC	5 cut(s)	841, 939, 1552, 1740, 1897
CspCI	CAANNNNNGTGG	2 cut(s)	907, 942
CviAII	CATG	8 cut(s)	125, 205, 585, 642, 1387, 1549, 1570, 1764
CviQI	GTAC	5 cut(s)	841, 939, 1552, 1740, 1897
DdeI	CTNAG	7 cut(s)	770, 977, 1146, 1283, 1399, 1525, 1718
DinI	GGCGCC	1 cut(s)	103
DpnI	GATC	4 cut(s)	329, 852, 879, 1137
DpnII	GATC	4 cut(s)	327, 850, 877, 1135
DrdI	GACNNNNNNGTC	1 cut(s)	1565
DseDI	GACNNNNNNGTC	1 cut(s)	1565
EciI	GGCGGA	1 cut(s)	1216
Ecl136II	GAGCTC	1 cut(s)	1398
Eco130I	CCWWGG	1 cut(s)	1840
Eco24I	GRGCYC	4 cut(s)	214, 276, 999, 1400
Eco31I	GGTCTC	1 cut(s)	1284
Eco32I	GATATC	1 cut(s)	1096
Eco47I	GGWCC	6 cut(s)	186, 406, 691, 929, 1189, 1325
Eco53kI	GAGCTC	1 cut(s)	1398
Eco57I	CTGAAG	2 cut(s)	1000, 1548
Eco72I	CACGTG	1 cut(s)	1102
Eco81I	CCTNAGG	1 cut(s)	1146
Eco88I	CYCGRG	1 cut(s)	277
EcoICRI	GAGCTC	1 cut(s)	1398
EcoO109I	RGGNCCY	4 cut(s)	211, 406, 1141, 1189
EcoRI	GAATTC	2 cut(s)	26, 480
EcoRII	CCWGG	4 cut(s)	655, 1023, 1252, 1287
EcoRV	GATATC	1 cut(s)	1096
EcoT14I	CCWWGG	1 cut(s)	1840
EcoT38I	GRGCYC	4 cut(s)	214, 276, 999, 1400
EgeI	GGCGCC	1 cut(s)	103
EheI	GGCGCC	1 cut(s)	103
ErhI	CCWWGG	1 cut(s)	1840
FaeI	CATG	8 cut(s)	128, 208, 588, 645, 1390, 1552, 1573, 1767
FaqI	GGGAC	4 cut(s)	98, 776, 1041, 1119
FatI	CATG	8 cut(s)	124, 204, 584, 641, 1386, 1548, 1569, 1763
FauI	CCCGC	2 cut(s)	49, 1301
FauNDI	CATATG	1 cut(s)	439
FbaI	TGATCA	1 cut(s)	850
Fnu4HI	GCNGC	6 cut(s)	100, 353, 369, 741, 1404, 1935
FokI	GGATG	4 cut(s)	1439, 1658, 1688, 1904
FriOI	GRGCYC	4 cut(s)	214, 276, 999, 1400
Fsp4HI	GCNGC	6 cut(s)	100, 353, 369, 741, 1404, 1935
FspBI	CTAG	4 cut(s)	120, 365, 875, 1887
GlaI	GCGC	2 cut(s)	98, 103
GluI	GCNGC	6 cut(s)	100, 353, 369, 741, 1404, 1935
GsaI	CCCAGC	1 cut(s)	813
GsuI	CTGGAG	2 cut(s)	983, 1055
HaeII	RGCGCY	1 cut(s)	105
HaeIII	GGCC	8 cut(s)	212, 508, 778, 869, 1142, 1245, 1260, 1292
HapII	CCGG	5 cut(s)	503, 509, 566, 744, 1242
HgaI	GACGC	1 cut(s)	9
HhaI	GCGC	2 cut(s)	99, 104
Hin1I	GRCGYC	1 cut(s)	102
Hin1II	CATG	8 cut(s)	128, 208, 588, 645, 1390, 1552, 1573, 1767
Hin6I	GCGC	2 cut(s)	97, 102
HinP1I	GCGC	2 cut(s)	97, 102
HincII	GTYRAC	3 cut(s)	473, 1170, 1884
HindII	GTYRAC	3 cut(s)	473, 1170, 1884
HindIII	AAGCTT	2 cut(s)	703, 1475
HinfI	GANTC	4 cut(s)	783, 1020, 1085, 1880
HpaII	CCGG	5 cut(s)	503, 509, 566, 744, 1242
HphI	GGTGA	6 cut(s)	322, 455, 661, 1171, 1186, 1532
Hpy166II	GTNNAC	9 cut(s)	189, 473, 553, 929, 1170, 1325, 1438, 1867, 1884
Hpy188I	TCNGA	6 cut(s)	25, 828, 1011, 1019, 1528, 1704
Hpy188III	TCNNGA	8 cut(s)	277, 733, 875, 1000, 1072, 1148, 1492, 1734
Hpy8I	GTNNAC	9 cut(s)	189, 473, 553, 929, 1170, 1325, 1438, 1867, 1884
HpyAV	CCTTC	9 cut(s)	263, 349, 682, 682, 739, 907, 1049, 1666, 1928
HpyCH4III	ACNGT	4 cut(s)	137, 1110, 1220, 1442
HpyCH4IV	ACGT	5 cut(s)	172, 432, 549, 925, 1101
HpyF10VI	GCNNNNNNNGC	4 cut(s)	94, 209, 1139, 1293
HpyF3I	CTNAG	7 cut(s)	770, 977, 1146, 1283, 1399, 1525, 1718
HpySE526I	ACGT	5 cut(s)	172, 432, 549, 925, 1101
Hsp92I	GRCGYC	1 cut(s)	102
Hsp92II	CATG	8 cut(s)	128, 208, 588, 645, 1390, 1552, 1573, 1767
HspAI	GCGC	2 cut(s)	97, 102
KasI	GGCGCC	1 cut(s)	101
Ksp22I	TGATCA	1 cut(s)	850
Kzo9I	GATC	4 cut(s)	327, 850, 877, 1135
LmnI	GCTCC	5 cut(s)	568, 755, 1002, 1301, 1352
Lsp1109I	GCAGC	5 cut(s)	339, 355, 727, 1415, 1921
LweI	GCATC	2 cut(s)	1530, 1714
MaeI	CTAG	4 cut(s)	120, 365, 875, 1887
MaeII	ACGT	5 cut(s)	172, 432, 549, 925, 1101
MaeIII	GTNAC	9 cut(s)	248, 433, 443, 523, 884, 1086, 1126, 1220, 1649
MalI	GATC	4 cut(s)	329, 852, 879, 1137
MbiI	CCGCTC	2 cut(s)	44, 1296
MboI	GATC	4 cut(s)	327, 850, 877, 1135
MboII	GAAGA	4 cut(s)	235, 281, 299, 302
MhlI	GDGCHC	7 cut(s)	214, 276, 284, 469, 999, 1125, 1400
Mly113I	GGCGCC	1 cut(s)	102
MlyI	GAGTC	2 cut(s)	1094, 1889
MmeI	TCCRAC	3 cut(s)	1495, 1648, 1682
MseI	TTAA	6 cut(s)	92, 489, 762, 863, 1509, 1957
MslI	CAYNNNNRTG	4 cut(s)	222, 1163, 1644, 1748
MspA1I	CMGCKG	1 cut(s)	809
MspI	CCGG	5 cut(s)	503, 509, 566, 744, 1242
MspR9I	CCNGG	5 cut(s)	504, 657, 1025, 1254, 1289
MteI	GCGCNGCGC	1 cut(s)	100
MvaI	CCWGG	4 cut(s)	657, 1025, 1254, 1289
MvnI	CGCG	4 cut(s)	20, 88, 99, 882
MwoI	GCNNNNNNNGC	4 cut(s)	94, 209, 1139, 1293
NarI	GGCGCC	1 cut(s)	102
NciI	CCSGG	1 cut(s)	504
NdeI	CATATG	1 cut(s)	439
NdeII	GATC	4 cut(s)	327, 850, 877, 1135
NlaIII	CATG	8 cut(s)	128, 208, 588, 645, 1390, 1552, 1573, 1767
NmeAIII	GCCGAG	1 cut(s)	427
NmuCI	GTSAC	4 cut(s)	443, 884, 1086, 1126
NspI	RCATGY	2 cut(s)	645, 1552
OliI	CACNNNNGTG	1 cut(s)	1748
PaeR7I	CTCGAG	1 cut(s)	277
PciI	ACATGT	1 cut(s)	1548
PcsI	WCGNNNNNNNCGW	1 cut(s)	429
PfeI	GAWTC	2 cut(s)	783, 1020
PflMI	CCANNNNNTGG	1 cut(s)	1253
PkrI	GCNGC	6 cut(s)	101, 354, 370, 742, 1405, 1936
PleI	GAGTC	2 cut(s)	1093, 1888
PluTI	GGCGCC	1 cut(s)	105
PmaCI	CACGTG	1 cut(s)	1102
PmlI	CACGTG	1 cut(s)	1102
PpsI	GAGTC	2 cut(s)	1093, 1888
Ppu21I	YACGTR	2 cut(s)	173, 1102
PpuMI	RGGWCCY	2 cut(s)	406, 1189
PscI	ACATGT	1 cut(s)	1548
PshBI	ATTAAT	1 cut(s)	489
Psp124BI	GAGCTC	1 cut(s)	1400
Psp5II	RGGWCCY	2 cut(s)	406, 1189
Psp6I	CCWGG	4 cut(s)	655, 1023, 1252, 1287
PspCI	CACGTG	1 cut(s)	1102
PspFI	CCCAGC	1 cut(s)	809
PspGI	CCWGG	4 cut(s)	655, 1023, 1252, 1287
PspOMI	GGGCCC	1 cut(s)	210
PspPPI	RGGWCCY	2 cut(s)	406, 1189
PstI	CTGCAG	1 cut(s)	373
PvuII	CAGCTG	1 cut(s)	809
RsaI	GTAC	5 cut(s)	842, 940, 1553, 1741, 1898
RsaNI	GTAC	5 cut(s)	841, 939, 1552, 1740, 1897
RseI	CAYNNNNRTG	4 cut(s)	222, 1163, 1644, 1748
SacI	GAGCTC	1 cut(s)	1400
SaqAI	TTAA	6 cut(s)	92, 489, 762, 863, 1509, 1957
SatI	GCNGC	6 cut(s)	100, 353, 369, 741, 1404, 1935
Sau3AI	GATC	4 cut(s)	327, 850, 877, 1135
SchI	GAGTC	2 cut(s)	1094, 1889
ScrFI	CCNGG	5 cut(s)	504, 657, 1025, 1254, 1289
SduI	GDGCHC	7 cut(s)	214, 276, 284, 469, 999, 1125, 1400
SfaNI	GCATC	2 cut(s)	1530, 1714
SfcI	CTRYAG	3 cut(s)	369, 970, 1391
SfoI	GGCGCC	1 cut(s)	103
Sfr274I	CTCGAG	1 cut(s)	277
SinI	GGWCC	6 cut(s)	186, 406, 691, 929, 1189, 1325
SlaI	CTCGAG	1 cut(s)	277
SmiMI	CAYNNNNRTG	4 cut(s)	222, 1163, 1644, 1748
SmlI	CTYRAG	3 cut(s)	277, 356, 1407
SmoI	CTYRAG	3 cut(s)	277, 356, 1407
SsiI	CCGC	8 cut(s)	42, 88, 99, 220, 882, 1227, 1294, 1481
SspDI	GGCGCC	1 cut(s)	101
SspMI	CTAG	4 cut(s)	120, 365, 875, 1887
SstI	GAGCTC	1 cut(s)	1400
StyD4I	CCNGG	5 cut(s)	502, 655, 1023, 1252, 1287
StyI	CCWWGG	1 cut(s)	1840
TaaI	ACNGT	4 cut(s)	137, 1110, 1220, 1442
TaiI	ACGT	5 cut(s)	175, 435, 552, 928, 1104
TaqI	TCGA	5 cut(s)	278, 313, 326, 423, 1788
TauI	GCSGC	1 cut(s)	102
TfiI	GAWTC	2 cut(s)	783, 1020
Tru1I	TTAA	6 cut(s)	92, 489, 762, 863, 1509, 1957
Tru9I	TTAA	6 cut(s)	92, 489, 762, 863, 1509, 1957
TscAI	CASTG	5 cut(s)	274, 403, 1207, 1440, 1447
TseFI	GTSAC	4 cut(s)	443, 884, 1086, 1126
TseI	GCWGC	5 cut(s)	352, 368, 740, 1403, 1934
Tsp45I	GTSAC	4 cut(s)	443, 884, 1086, 1126
TspDTI	ATGAA	4 cut(s)	17, 157, 573, 1441
TspRI	CASTG	5 cut(s)	274, 403, 1207, 1440, 1447
Van91I	CCANNNNNTGG	1 cut(s)	1253
VpaK11BI	GGWCC	6 cut(s)	186, 406, 691, 929, 1189, 1325
VspI	ATTAAT	1 cut(s)	489
XapI	RAATTY	3 cut(s)	26, 162, 480
XbaI	TCTAGA	1 cut(s)	874
XceI	RCATGY	2 cut(s)	645, 1552
XhoI	CTCGAG	1 cut(s)	277
XspI	CTAG	4 cut(s)	120, 365, 875, 1887

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.