Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0004964

Physical Location & Seq

Genomic Coordinates Reverse (-)

20132817 .. 20135884

Gene Structure 3068 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g16860.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2658 bp

ATGTCAAAAGAAGTGGTGTCTAAGAAGAATCCGCCCAACTTGGTTGCTAAATTGATGGGGCTTGATGCTCTCCCACTTGAGCAGTCCGATTCAGCTTCACAAAGAAGTCATACAAACAGTTATTCGCAAGGTACTAATAACAGCATGCCATTGGGATGTTGGCAGCAAGAAGATGGGTTTTTGGACAACGGAATTCCACGCGAATTTCATCAGTGTTCAGAGCAGAATGATTACAAAGATGTTTATGAAGTCTGGCAACAACCTCAGAAGGCAAATTATGGAAGAAATATGTCGCCGCAGAAGGGAAGGTATAATGAAAAAGTTAACGAGAAGAAGATGACTCTTGTTCGTCAGAAGTTCATGGAAGCAAAACGCTTGGCCACCGATGAGAGGCTTCGCCAGTCCAAGGAGTTCCAAGATGCACTTGACGTATTAAGTTCCAATAGAGAATTGTTCCTCAAGTTTCTGCAAGAACCTAATTCCTTATTTTCTCAGCATCTACATGAATTACAATCTATTCCTCCCCAGCCTACTGAGACAAAGCGGATCACTGTTCTCAGACCTTCAAAGATGGTTTCTAGTGAAAAATTATCAGGCATAGGGGACAAGAATGATGAACAGACAAAGAAATCAGCTCAGGTCGGTCAAGCAGCTGCATGGGACAAAGGCCACCATGGATACTCTCCTACTATTGTTGATCAGGAAGTTGATGGATATCCGGCTCCACCAACTCGGATAGTGGTATTAAGGCCTAGCCCTGGGAATGTTAATGACATTAAGGCTGTGGTTTCTTCACCCACCTCATCACCAAGAGTTTTACATGGTGAAAACTTCTATGAGGAACCTGAAGATGATGAGGAGCGAGAATCAAGAGAAGTTGCAAAGGAGATCACGCAGAAGATGCATGATAATTTGATGGGTCATCGGAGGGACAAAACTTTGATTTCCTCTGTATTTTCCAATGGCCATACCGGTGATGAAAGTTCATTTTACAAATCAGACCATGAATATGCAGGAGGAAATCTCAGTGATTCTGAAGTTATGTCACCATCTTCTAGGCATTCATGGGATTACGTCAATAGGTTTGGCAGCCCTTTTTCTTCGTCCTCCTTCAGCCGCATGTCATGTTCGCCAGAATCATCCGTTTGCAGAGAGGCGAAGAAGCGACTTTCTGAAAGATGGGCAATGATGGCACTAAATGGGAATCCTCAGGAACAAAGACATGCTCGGAGAAGCTCTAGTACACTGGGAGAGATGCTTGCCCTCTCAGAGATAAAGAAGCCAGAAAGATCTGAGGATGACAGTATTCAGAAGGAACAAGAACCAAGGGAATCAGTTTCATGCTTGCCTATTGATTCTAGAAAAGAAGAAGTTGTTGTTGATTCTCCCAGAAATCTTTTGAGGTCAAAATCTCTCCCTGTATCTTCTACAGTATATGGTGGCGGGGTCAATGTTCAAGTTTCAGATCCCGAAGATGTAAAGACAGATGTTCCCAAAGAGCTAACAAAGGCAAAGAGCATGAAATCATTGCTAAAAGGGAAAGTCTCAAGTTTATTTTTCTCCAGAAATAAGAAATCAAATAAAGGGAAATCTAGCGAATCTCAATCTGCCCTTGCTGAACCACCAAATTCTCTGGTTCCTCCTGGCATAATTAGTGATGATGCATCTCAGTGTGCTAATGATGGTGGTTTTGAAGGTTGTCTGTCTCCTGCTTTATTTGGATATTTAGGAAAAGAATCTCCACATGTAACAAGCATGGGACAAAACCAAGGCACCGTTCCACGTGAGGCAGGGTTGTGTGTGGCAAAACATGTGGTGCCCGGTTGTGTTGGTGAGAATCCGGATCAACCAAGTCCAATATCAGTTCTAGAACCACCGTTCGAAGAGGATGACAATACAGCCCAGGAATCCTCCGTGCATTTGAAGCAAGACCACCTAGGTAGACTTCTCAAGTCTAACTTGATTGACAAATCACCACTTATAGGATCAATTGCGCGGACGCTGTCATGGGATGAGTCTTGTGCAGAGACAGCCACACCATATCTATTAAAATCCCCTTCGGTTTCAACTGAGGAGGAAGAACAAGACTGGCATGCCACTGTCCAGACTCTTTTATCCGCTGCTGGCCTAGACGGCGAGGTGCAGTGCGACTCCTTTTTCGCAATATGGCATTCGCTTGATAGTCCTTTGGACCCGTCTCTGAGAGACAAGTACTCCAACCTAAGTGACAAAGAGCCTCTGCATGAGGCTAAACGAAGGCGATTGCGATCAAGTCAGAAGCTTGTATTCGACTGCGTGAATGCAGCCTTGCTGGACATCACCGGTCATGGGTCCGACAGCTGCTCAAGGACCACGTCATGCAGCGGGGCCCATGACAGGTTCGTAGAGGGTGATTCTCCGCTGTTGGCAGACCGTGTGTGGGCCCGAATGAAGGAATGGTTTTCTGATGAGGTGAGGTGTGTTTCGGATGGTGGCGGGGACATCAACGGCCTGGTGGTGGAGAGGGTGGTGGAGAGAGTGGTGAAGAAGGAGGTTGTCGGGAAGGGGTGGTCGGAACACATGAGATTGGAAGTTGATAATCTGGGGAGGGGCATAGAGGGGAAGTTGCTGGAGGAGCTGGTGGAGGAGGCAGTGGTGGGTTTGACAGGGAGGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3741 DUF4378 VARLMGL

Protein Analysis

886

Amino Acids

98.1

Weight (kDa)

5.59

Isoelectric Point (pI)

60.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004964)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20240 AT4G28760 AT4G28760
fragaria_vesca	FvH4_2g19940 FvH4_2g19940 FvH4_2g19940 FvH4_2g19940 FvH4_2g19940 FvH4_2g19940
malus_domestica	MD05G1183600.v1.1 MD10G1171400.v1.1
prunus_persica	Prupe.8G209800_v2.0.a1 Prupe.8G209800_v2.0.a1 Prupe.8G209800_v2.0.a1 Prupe.8G209800_v2.0.a1 Prupe.8G209800_v2.0.a1
pyrus_communis	pycom05g16860 pycom10g14780
rosa_chinensis	RchiOBHm_Chr6g0285601
rosa_laevigata	RLG00000012623
rosa_multiflora	Rmu_sc0001356.1_g000026 Rmu_sc0017770.1_g000008
rosa_rugosa	Rorug06G0176000.1 Rorug06G0176100 Rorug06G0176100
rosa_samantha	Rh6AG287400 Rh6BG288800 Rh6CG289900 Rh6DG282600
rosa_wichuraiana	Rw6G024710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1772, 1816
AccI	GTMKAC	1 cut(s)	1942
AccII	CGCG	2 cut(s)	201, 1996
AccIII	TCCGGA	1 cut(s)	1840
AclWI	GGATC	4 cut(s)	554, 1460, 1851, 1993
AcoI	YGGCCR	2 cut(s)	378, 964
AcsI	RAATTY	3 cut(s)	192, 203, 1627
AcuI	CTGAAG	3 cut(s)	867, 1056, 1096
AcvI	CACGTG	1 cut(s)	1784
AfaI	GTAC	3 cut(s)	133, 1243, 2213
AflIII	ACRYGT	2 cut(s)	1744, 1810
AgeI	ACCGGT	2 cut(s)	971, 2321
AgsI	TTSAA	5 cut(s)	567, 1457, 1694, 1924, 2067
AjiI	CACGTC	1 cut(s)	2355
AjnI	CCWGG	4 cut(s)	757, 1642, 1902, 2490
AjuI	GAANNNNNNNTTGG	2 cut(s)	1761, 1793
AluBI	AGCT	8 cut(s)	95, 635, 653, 1236, 1501, 2281, 2340, 2617
AluI	AGCT	8 cut(s)	95, 635, 653, 1236, 1501, 2281, 2340, 2617
Alw26I	GTCTC	6 cut(s)	530, 1549, 1710, 2021, 2199, 2202
AlwI	GGATC	4 cut(s)	554, 1460, 1851, 1993
Aor13HI	TCCGGA	1 cut(s)	1840
AoxI	GGCC	8 cut(s)	378, 667, 749, 964, 2125, 2367, 2421, 2488
ApaI	GGGCCC	2 cut(s)	2371, 2425
ApeKI	GCWGC	8 cut(s)	163, 650, 653, 1089, 2120, 2303, 2340, 2361
ApoI	RAATTY	3 cut(s)	192, 203, 1627
ArsI	GACNNNNNNTTYG	2 cut(s)	2141, 2173
AsiGI	ACCGGT	2 cut(s)	971, 2321
AspA2I	CCTAGG	1 cut(s)	1936
AspLEI	GCGC	1 cut(s)	1996
AspS9I	GGNCC	7 cut(s)	2191, 2331, 2349, 2367, 2368, 2421, 2422
AsuC2I	CCSGG	1 cut(s)	1821
AsuII	TTCGAA	1 cut(s)	1881
AvaII	GGWCC	3 cut(s)	2191, 2331, 2349
AvrII	CCTAGG	1 cut(s)	1936
AxyI	CCTNAGG	1 cut(s)	1209
BaeGI	GKGCMC	3 cut(s)	1821, 2371, 2425
BalI	TGGCCA	2 cut(s)	380, 966
BanI	GGYRCC	2 cut(s)	1772, 1816
BanII	GRGCYC	2 cut(s)	2371, 2425
BarI	GAAGNNNNNNTAC	2 cut(s)	1225, 1257
BbrPI	CACGTG	1 cut(s)	1784
BbvI	GCAGC	8 cut(s)	175, 640, 662, 1101, 2107, 2315, 2327, 2373
BceAI	ACGGC	2 cut(s)	2149, 2503
BciT130I	CCWGG	4 cut(s)	759, 1644, 1904, 2492
BciVI	GTATCC	1 cut(s)	671
BclI	TGATCA	1 cut(s)	697
BcnI	CCSGG	1 cut(s)	1821
BcoDI	GTCTC	6 cut(s)	530, 1549, 1710, 2021, 2199, 2202
BfaI	CTAG	9 cut(s)	579, 753, 1056, 1239, 1359, 1593, 1868, 1937, 2129
BfmI	CTRYAG	1 cut(s)	1428
BfuI	GTATCC	1 cut(s)	671
BglI	GCCNNNNNGGC	1 cut(s)	2133
BglII	AGATCT	1 cut(s)	1289
BlnI	CCTAGG	1 cut(s)	1936
BmcAI	AGTACT	1 cut(s)	2213
Bme1390I	CCNGG	5 cut(s)	759, 1644, 1821, 1904, 2492
Bme18I	GGWCC	3 cut(s)	2191, 2331, 2349
BmgBI	CACGTC	1 cut(s)	2355
BmgT120I	GGNCC	7 cut(s)	2191, 2331, 2349, 2367, 2368, 2421, 2422
BmrFI	CCNGG	5 cut(s)	759, 1644, 1821, 1904, 2492
BmrI	ACTGGG	1 cut(s)	1256
BmsI	GCATC	7 cut(s)	55, 409, 505, 891, 1245, 1651, 1673
BmuI	ACTGGG	1 cut(s)	1256
BplI	GAGNNNNNCTC	2 cut(s)	1008, 1040
BpmI	CTGGAG	2 cut(s)	1546, 2630
Bpu10I	CCTNAGC	1 cut(s)	636
Bpu14I	TTCGAA	1 cut(s)	1881
BpuEI	CTTGAG	5 cut(s)	98, 443, 1531, 1934, 2329
BpuMI	CCSGG	1 cut(s)	1821
BsaAI	YACGTR	1 cut(s)	1784
BsaBI	GATNNNNATC	2 cut(s)	714, 2266
BsaJI	CCNNGG	8 cut(s)	405, 673, 757, 758, 1325, 1768, 1902, 1936
BsaWI	WCCGGW	3 cut(s)	971, 1840, 2321
BsaXI	ACNNNNNCTCC	2 cut(s)	2198, 2228
Bse118I	RCCGGY	2 cut(s)	971, 2321
Bse1I	ACTGG	3 cut(s)	400, 1251, 2093
Bse21I	CCTNAGG	1 cut(s)	1209
Bse3DI	GCAATG	2 cut(s)	1191, 1526
Bse8I	GATNNNNATC	2 cut(s)	714, 2266
BseAI	TCCGGA	1 cut(s)	1840
BseBI	CCWGG	4 cut(s)	759, 1644, 1904, 2492
BseDI	CCNNGG	8 cut(s)	405, 673, 757, 758, 1325, 1768, 1902, 1936
BseGI	GGATG	6 cut(s)	161, 1139, 1303, 1894, 2017, 2473
BseJI	GATNNNNATC	2 cut(s)	714, 2266
BseMI	GCAATG	2 cut(s)	1191, 1526
BseNI	ACTGG	3 cut(s)	400, 1251, 2093
BseRI	GAGGAG	4 cut(s)	872, 2087, 2627, 2639
BseSI	GKGCMC	3 cut(s)	1821, 2371, 2425
BseXI	GCAGC	8 cut(s)	175, 640, 662, 1101, 2107, 2315, 2327, 2373
BseYI	CCCAGC	1 cut(s)	525
BsgI	GTGCAG	2 cut(s)	2043, 2162
Bsh1236I	CGCG	2 cut(s)	201, 1996
BshFI	GGCC	8 cut(s)	380, 669, 751, 966, 2127, 2369, 2423, 2490
BshNI	GGYRCC	2 cut(s)	1772, 1816
BshTI	ACCGGT	2 cut(s)	971, 2321
BsiSI	CCGG	5 cut(s)	719, 972, 1821, 1841, 2322
BslFI	GGGAC	5 cut(s)	617, 674, 944, 1773, 2492
BsmAI	GTCTC	6 cut(s)	530, 1549, 1710, 2021, 2199, 2202
BsmBI	CGTCTC	1 cut(s)	2202
BsmFI	GGGAC	5 cut(s)	617, 674, 944, 1773, 2492
BsmI	GAATGC	3 cut(s)	1060, 2170, 2305
BsnI	GGCC	8 cut(s)	380, 669, 751, 966, 2127, 2369, 2423, 2490
Bsp119I	TTCGAA	1 cut(s)	1881
Bsp120I	GGGCCC	2 cut(s)	2367, 2421
Bsp1286I	GDGCHC	3 cut(s)	1821, 2371, 2425
Bsp13I	TCCGGA	1 cut(s)	1840
Bsp143I	GATC	8 cut(s)	546, 697, 888, 1289, 1465, 1843, 1985, 2267
Bsp19I	CCATGG	1 cut(s)	673
BspANI	GGCC	8 cut(s)	380, 669, 751, 966, 2127, 2369, 2423, 2490
BspEI	TCCGGA	1 cut(s)	1840
BspFNI	CGCG	2 cut(s)	201, 1996
BspPI	GGATC	4 cut(s)	554, 1460, 1851, 1993
BspT104I	TTCGAA	1 cut(s)	1881
BspT107I	GGYRCC	2 cut(s)	1772, 1816
BsrDI	GCAATG	2 cut(s)	1191, 1526
BsrFI	RCCGGY	2 cut(s)	971, 2321
BsrI	ACTGG	3 cut(s)	400, 1251, 2093
BssAI	RCCGGY	2 cut(s)	971, 2321
BssECI	CCNNGG	8 cut(s)	405, 673, 757, 758, 1325, 1768, 1902, 1936
BssMI	GATC	8 cut(s)	546, 697, 888, 1289, 1465, 1843, 1985, 2267
BssT1I	CCWWGG	5 cut(s)	405, 673, 1325, 1768, 1936
Bst2UI	CCWGG	4 cut(s)	759, 1644, 1904, 2492
Bst4CI	ACNGT	8 cut(s)	119, 553, 1304, 1432, 1777, 1878, 2101, 2414
Bst6I	CTCTTC	1 cut(s)	1878
BstAPI	GCANNNNNTGC	1 cut(s)	901
BstBAI	YACGTR	1 cut(s)	1784
BstBI	TTCGAA	1 cut(s)	1881
BstC8I	GCNNGC	5 cut(s)	146, 1260, 1346, 2094, 2125
BstDSI	CCRYGG	1 cut(s)	673
BstF5I	GGATG	6 cut(s)	161, 1139, 1303, 1894, 2017, 2473
BstFNI	CGCG	2 cut(s)	201, 1996
BstHHI	GCGC	1 cut(s)	1996
BstKTI	GATC	8 cut(s)	549, 700, 891, 1292, 1468, 1846, 1988, 2270
BstMAI	GTCTC	6 cut(s)	530, 1549, 1710, 2021, 2199, 2202
BstMBI	GATC	8 cut(s)	546, 697, 888, 1289, 1465, 1843, 1985, 2267
BstMWI	GCNNNNNNNGC	6 cut(s)	901, 1190, 1924, 2030, 2133, 2614
BstNI	CCWGG	4 cut(s)	759, 1644, 1904, 2492
BstNSI	RCATGY	6 cut(s)	148, 1123, 1226, 1748, 1814, 2096
BstSCI	CCNGG	5 cut(s)	757, 1642, 1819, 1902, 2490
BstSFI	CTRYAG	1 cut(s)	1428
BstSLI	GKGCMC	3 cut(s)	1821, 2371, 2425
BstUI	CGCG	2 cut(s)	201, 1996
BstV1I	GCAGC	8 cut(s)	175, 640, 662, 1101, 2107, 2315, 2327, 2373
BstX2I	RGATCY	2 cut(s)	1289, 1465
BstYI	RGATCY	2 cut(s)	1289, 1465
Bsu36I	CCTNAGG	1 cut(s)	1209
BsuI	GTATCC	1 cut(s)	671
BsuRI	GGCC	8 cut(s)	380, 669, 751, 966, 2127, 2369, 2423, 2490
BtgI	CCRYGG	1 cut(s)	673
BtrI	CACGTC	1 cut(s)	2355
BtsCI	GGATG	6 cut(s)	161, 1139, 1303, 1894, 2017, 2473
BtsI	GCAGTG	2 cut(s)	2150, 2637
BtsIMutI	CAGTG	8 cut(s)	218, 549, 1033, 1244, 1676, 2097, 2150, 2637
Cac8I	GCNNGC	5 cut(s)	146, 1260, 1346, 2094, 2125
CfoI	GCGC	1 cut(s)	1996
Cfr10I	RCCGGY	2 cut(s)	971, 2321
Cfr13I	GGNCC	7 cut(s)	2191, 2331, 2349, 2367, 2368, 2421, 2422
CseI	GACGC	1 cut(s)	2008
Csp6I	GTAC	3 cut(s)	132, 1242, 2212
CspAI	ACCGGT	2 cut(s)	971, 2321
CspCI	CAANNNNNGTGG	3 cut(s)	29, 1794, 1829
CviQI	GTAC	3 cut(s)	132, 1242, 2212
DpnI	GATC	8 cut(s)	548, 699, 890, 1291, 1467, 1845, 1987, 2269
DpnII	GATC	8 cut(s)	546, 697, 888, 1289, 1465, 1843, 1985, 2267
EaeI	YGGCCR	2 cut(s)	378, 964
Eam1104I	CTCTTC	1 cut(s)	1878
EarI	CTCTTC	1 cut(s)	1878
EciI	GGCGGA	1 cut(s)	21
Eco130I	CCWWGG	5 cut(s)	405, 673, 1325, 1768, 1936
Eco147I	AGGCCT	1 cut(s)	751
Eco24I	GRGCYC	2 cut(s)	2371, 2425
Eco32I	GATATC	1 cut(s)	716
Eco47I	GGWCC	3 cut(s)	2191, 2331, 2349
Eco57I	CTGAAG	3 cut(s)	867, 1056, 1096
Eco72I	CACGTG	1 cut(s)	1784
Eco81I	CCTNAGG	1 cut(s)	1209
EcoO109I	RGGNCCY	1 cut(s)	2367
EcoRI	GAATTC	1 cut(s)	192
EcoRII	CCWGG	4 cut(s)	757, 1642, 1902, 2490
EcoRV	GATATC	1 cut(s)	716
EcoT14I	CCWWGG	5 cut(s)	405, 673, 1325, 1768, 1936
EcoT22I	ATGCAT	2 cut(s)	906, 1666
EcoT38I	GRGCYC	2 cut(s)	2371, 2425
ErhI	CCWWGG	5 cut(s)	405, 673, 1325, 1768, 1936
Esp3I	CGTCTC	1 cut(s)	2202
FalI	AAGNNNNNCTT	4 cut(s)	408, 440, 1943, 1975
FaqI	GGGAC	5 cut(s)	617, 674, 944, 1773, 2492
FauI	CCCGC	3 cut(s)	1436, 2357, 2468
FbaI	TGATCA	1 cut(s)	697
FblI	GTMKAC	1 cut(s)	1942
FokI	GGATG	6 cut(s)	168, 1126, 1310, 1901, 2024, 2480
FriOI	GRGCYC	2 cut(s)	2371, 2425
FspBI	CTAG	9 cut(s)	579, 753, 1056, 1239, 1359, 1593, 1868, 1937, 2129
GlaI	GCGC	1 cut(s)	1995
GsaI	CCCAGC	1 cut(s)	529
GsuI	CTGGAG	2 cut(s)	1546, 2630
HaeIII	GGCC	8 cut(s)	380, 669, 751, 966, 2127, 2369, 2423, 2490
HapII	CCGG	5 cut(s)	719, 972, 1821, 1841, 2322
HgaI	GACGC	1 cut(s)	2008
HhaI	GCGC	1 cut(s)	1996
Hin6I	GCGC	1 cut(s)	1994
HinP1I	GCGC	1 cut(s)	1994
HincII	GTYRAC	1 cut(s)	325
HindII	GTYRAC	1 cut(s)	325
HindIII	AAGCTT	1 cut(s)	2279
HpaI	GTTAAC	1 cut(s)	325
HpaII	CCGG	5 cut(s)	719, 972, 1821, 1841, 2322
Hpy166II	GTNNAC	3 cut(s)	325, 1244, 1943
Hpy8I	GTNNAC	3 cut(s)	325, 1244, 1943
HpyCH4III	ACNGT	8 cut(s)	119, 553, 1304, 1432, 1777, 1878, 2101, 2414
HpyCH4IV	ACGT	4 cut(s)	429, 1074, 1783, 2354
HpyF10VI	GCNNNNNNNGC	6 cut(s)	901, 1190, 1924, 2030, 2133, 2614
HpySE526I	ACGT	4 cut(s)	429, 1074, 1783, 2354
HspAI	GCGC	1 cut(s)	1994
Kpn2I	TCCGGA	1 cut(s)	1840
Ksp22I	TGATCA	1 cut(s)	697
KspAI	GTTAAC	1 cut(s)	325
Kzo9I	GATC	8 cut(s)	546, 697, 888, 1289, 1465, 1843, 1985, 2267
LmnI	GCTCC	3 cut(s)	727, 859, 2614
Lsp1109I	GCAGC	8 cut(s)	175, 640, 662, 1101, 2107, 2315, 2327, 2373
LweI	GCATC	7 cut(s)	55, 409, 505, 891, 1245, 1651, 1673
MaeI	CTAG	9 cut(s)	579, 753, 1056, 1239, 1359, 1593, 1868, 1937, 2129
MaeII	ACGT	4 cut(s)	429, 1074, 1783, 2354
MaeIII	GTNAC	3 cut(s)	1044, 1747, 2225
MalI	GATC	8 cut(s)	548, 699, 890, 1291, 1467, 1845, 1987, 2269
MboI	GATC	8 cut(s)	546, 697, 888, 1289, 1465, 1843, 1985, 2267
MfeI	CAATTG	1 cut(s)	1989
MflI	RGATCY	2 cut(s)	1289, 1465
MhlI	GDGCHC	3 cut(s)	1821, 2371, 2425
MlsI	TGGCCA	2 cut(s)	380, 966
MluNI	TGGCCA	2 cut(s)	380, 966
MlyI	GAGTC	4 cut(s)	334, 2024, 2101, 2144
MmeI	TCCRAC	3 cut(s)	2241, 2358, 2532
Mox20I	TGGCCA	2 cut(s)	380, 966
Mph1103I	ATGCAT	2 cut(s)	906, 1666
MroI	TCCGGA	1 cut(s)	1840
MscI	TGGCCA	2 cut(s)	380, 966
MseI	TTAA	6 cut(s)	324, 434, 746, 768, 777, 2048
MslI	CAYNNNNRTG	5 cut(s)	154, 501, 972, 1008, 1669
Msp20I	TGGCCA	2 cut(s)	380, 966
MspA1I	CMGCKG	5 cut(s)	653, 2120, 2340, 2364, 2401
MspI	CCGG	5 cut(s)	719, 972, 1821, 1841, 2322
MspR9I	CCNGG	5 cut(s)	759, 1644, 1821, 1904, 2492
MunI	CAATTG	1 cut(s)	1989
Mva1269I	GAATGC	3 cut(s)	1060, 2170, 2305
MvaI	CCWGG	4 cut(s)	759, 1644, 1904, 2492
MvnI	CGCG	2 cut(s)	201, 1996
MwoI	GCNNNNNNNGC	6 cut(s)	901, 1190, 1924, 2030, 2133, 2614
NciI	CCSGG	1 cut(s)	1821
NcoI	CCATGG	1 cut(s)	673
NdeII	GATC	8 cut(s)	546, 697, 888, 1289, 1465, 1843, 1985, 2267
NmuCI	GTSAC	2 cut(s)	1044, 2225
NsiI	ATGCAT	2 cut(s)	906, 1666
NspI	RCATGY	6 cut(s)	148, 1123, 1226, 1748, 1814, 2096
NspV	TTCGAA	1 cut(s)	1881
PaeI	GCATGC	2 cut(s)	148, 2096
PasI	CCCWGGG	1 cut(s)	758
PceI	AGGCCT	1 cut(s)	751
PciI	ACATGT	2 cut(s)	1744, 1810
PctI	GAATGC	3 cut(s)	1060, 2170, 2305
PflFI	GACNNNGTC	2 cut(s)	2002, 2353
PinAI	ACCGGT	2 cut(s)	971, 2321
PleI	GAGTC	4 cut(s)	334, 2023, 2101, 2144
PmaCI	CACGTG	1 cut(s)	1784
PmlI	CACGTG	1 cut(s)	1784
PpsI	GAGTC	4 cut(s)	334, 2023, 2101, 2144
Ppu21I	YACGTR	1 cut(s)	1784
PscI	ACATGT	2 cut(s)	1744, 1810
Psp6I	CCWGG	4 cut(s)	757, 1642, 1902, 2490
PspCI	CACGTG	1 cut(s)	1784
PspFI	CCCAGC	1 cut(s)	525
PspGI	CCWGG	4 cut(s)	757, 1642, 1902, 2490
PspOMI	GGGCCC	2 cut(s)	2367, 2421
PspPI	GGNCC	7 cut(s)	2191, 2331, 2349, 2367, 2368, 2421, 2422
PsuI	RGATCY	2 cut(s)	1289, 1465
PsyI	GACNNNGTC	2 cut(s)	2002, 2353
PvuII	CAGCTG	2 cut(s)	653, 2340
RsaI	GTAC	3 cut(s)	133, 1243, 2213
RsaNI	GTAC	3 cut(s)	132, 1242, 2212
RseI	CAYNNNNRTG	5 cut(s)	154, 501, 972, 1008, 1669
SaqAI	TTAA	6 cut(s)	324, 434, 746, 768, 777, 2048
Sau3AI	GATC	8 cut(s)	546, 697, 888, 1289, 1465, 1843, 1985, 2267
Sau96I	GGNCC	7 cut(s)	2191, 2331, 2349, 2367, 2368, 2421, 2422
ScaI	AGTACT	1 cut(s)	2213
SchI	GAGTC	4 cut(s)	334, 2024, 2101, 2144
ScrFI	CCNGG	5 cut(s)	759, 1644, 1821, 1904, 2492
SduI	GDGCHC	3 cut(s)	1821, 2371, 2425
SfaNI	GCATC	7 cut(s)	55, 409, 505, 891, 1245, 1651, 1673
SfcI	CTRYAG	1 cut(s)	1428
SfuI	TTCGAA	1 cut(s)	1881
SinI	GGWCC	3 cut(s)	2191, 2331, 2349
SmiMI	CAYNNNNRTG	5 cut(s)	154, 501, 972, 1008, 1669
SmlI	CTYRAG	5 cut(s)	77, 458, 1546, 1949, 2344
SmoI	CTYRAG	5 cut(s)	77, 458, 1546, 1949, 2344
SphI	GCATGC	2 cut(s)	148, 2096
SseBI	AGGCCT	1 cut(s)	751
SspMI	CTAG	9 cut(s)	579, 753, 1056, 1239, 1359, 1593, 1868, 1937, 2129
StuI	AGGCCT	1 cut(s)	751
StyD4I	CCNGG	5 cut(s)	757, 1642, 1819, 1902, 2490
StyI	CCWWGG	5 cut(s)	405, 673, 1325, 1768, 1936
TaaI	ACNGT	8 cut(s)	119, 553, 1304, 1432, 1777, 1878, 2101, 2414
TaiI	ACGT	4 cut(s)	432, 1077, 1786, 2357
TaqI	TCGA	2 cut(s)	1881, 2289
TaqII	GACCGA	1 cut(s)	632
TatI	WGTACW	2 cut(s)	1241, 2211
TauI	GCSGC	2 cut(s)	298, 1119
Tru1I	TTAA	6 cut(s)	324, 434, 746, 768, 777, 2048
Tru9I	TTAA	6 cut(s)	324, 434, 746, 768, 777, 2048
TscAI	CASTG	8 cut(s)	218, 556, 1033, 1251, 1676, 2104, 2150, 2637
TseFI	GTSAC	2 cut(s)	1044, 2225
TseI	GCWGC	8 cut(s)	163, 650, 653, 1089, 2120, 2303, 2340, 2361
Tsp45I	GTSAC	2 cut(s)	1044, 2225
TspGWI	ACGGA	3 cut(s)	204, 1132, 1903
TspRI	CASTG	8 cut(s)	218, 556, 1033, 1251, 1676, 2104, 2150, 2637
Tth111I	GACNNNGTC	2 cut(s)	2002, 2353
VpaK11BI	GGWCC	3 cut(s)	2191, 2331, 2349
XapI	RAATTY	3 cut(s)	192, 203, 1627
XbaI	TCTAGA	2 cut(s)	1358, 1867
XceI	RCATGY	6 cut(s)	148, 1123, 1226, 1748, 1814, 2096
XcmI	CCANNNNNNNNNTGG	1 cut(s)	156
XmaJI	CCTAGG	1 cut(s)	1936
XmiI	GTMKAC	1 cut(s)	1942
XspI	CTAG	9 cut(s)	579, 753, 1056, 1239, 1359, 1593, 1868, 1937, 2129
ZrmI	AGTACT	1 cut(s)	2213
Zsp2I	ATGCAT	2 cut(s)	906, 1666

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.