Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0004964

Physical Location & Seq

Genomic Coordinates Reverse (-)

47677729 .. 47683609

Gene Structure 5881 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG282600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGAAGGGGATGCATAGCAGCAAAGCGCACAATGTTGATAAGCCCTTCCCGGGATGCCTGGGAAGAATGGTCAACCTCTTTGATACCGGGGTTTCTAGAAACAAGCTGCTCACGGATAAACCCCACCGAGATGGCTCTTCACTCTCAAGGAGTCAATCAGATGTGGTAACAATGCTGGGTTCCCCCTTTGGAGAACAAATAGAGGATAAAGTGATTGTTTCAGAGTTGAGGAGAAGTTCATCAAACAATAAAACAAATGGAACACCGATAAAGATGCTTTTAGACCAAGAAATGTCAAAAGAGGTGGAAACTAAGAAGAATCCACCTAATGTAGTTGCCAAGTTGATGGGTCTTGATTCTTTCCCACGACAACAGCCTGATTCAACTGCACAAAGAAGTAATGCAAGCAATTATTCACAATGTACTAATAATCATTCCAGTGTACCATTGGGATGTTGGCAGCAAGAAGATGAGTTTTTGGACAAGAGAATGCAGCATGAATTTCATCAGTGTCCGGAGCAGAATGATTACAAGGATGTTTATGAAGTATGGCAGCAACCTCAGAAGACAAGTTACGGAAGAAATAAGTCACCACAGAAGGGAAGGTATAATGAAAAGATTAATGAGAAGCAGATGGATCTTGTTCGTCAGAAGTTCATGGAAGCCAAACGCTTGGCTACAGATGAGAGGCTTCGCCAATCCAAAGAATTCCAAGATGCACTCGAAGTATTAAGTTCCAATAAAGATTTGTTTCTTACGTTTCTGCAAGAACCAAATTCCTTGTTTTCTCAACATCTATATGAATTACAATCTCTTCCTCCACCTACAGAGACAAAGCGAATCACTGTTCTTAGACCTACAAAGATGGTTTCAAATGACAATTTTGCGGGAGCAGGGAACAAGAGTGATAAACAGACAAAGAAGTCATCTCAGGTATGTCAGGCAGCGTGGGAAAGCCACCATTTATACTCTCCTACCATTGCTGATCAGAAAGTTGATGAATATCCTGCTCCAGCAACTCGGATAGTGGTGTTGAGGCCTAGCCCTGGGAAGACTCAGGATGGTAAGGCCATGGGTTCTTCCCCTACCTCATCACCAAGATTACATGGTGAAAACTTCTATGAGGAGCATGAAGATGATGAGGTGCAAGAATCAGTAGAAGTTGCAGAGGAGATCACACAGACAATGCGTGATAATTCGATGGGCCACCGGAGGGTTGAAACTTTGCTTTCCTCTGTCTTTTCCAATGGTTATACGGGAGATGAGAGTTCGTTTCACAAATCAGAAAATGAATATGCAGCTGGAAATCTCAGTGACTCAGAAGTCATGTCACCATCTTTTAGGCATACGTGGGATCACATTAATGGGTTTGGCAGCCCTTTTTCTTCTTCTTCCTTCAGTCGCATGTCATGTTCTCCAGAGTCATCTGTATGCAGAGAAGCCAAGAAGCGACTTTCTGAAAGATGGGCCATGATGGCATTAAATGGAAATTCTCAGGAGCAAAGACATGCCCGAAGGAGCTCTAGTACATTAGGTGAGATGCTTGCTCTATCAGAGGTTAAGAAGTCAACAACATCTGAGGATGAGATTAGTCACAAGGAACAAGAACGAAGGGAATCAGTTTCATGCTTGATTAGTGATTCAAGTAAGGAAGAGCTGGTTGATTCTCCTAGTCTTTTGAGGTCGAAATCTCTCCCTGTATCTTCTGCGGTATTTAGCAACCGGATCAACATTGAAGTTTCAGATCATGAGGCGGGGAAGATAGATGTTCCCAAAGAGCTGAATAAGGCAAAGAGCATGAAGTCATCATTGAAAGGGAAAGTCTCAAGTTTATTTTTCTCTAGAAATAAGAAATCAAATAAAGAGAAATCTGAGGCATTTCGAGCAAACAAGGAATCTCAATCTTCCTTTTCTGAACAATTAAGTTCTCTGGTTCGTCCGGGAATGATTAGTGATGATGCATCTCAGTGTTCCAATGATGGTGGATTTGAAGGGTGTTTCTCTCCTGCTTTATGTGGTGCTTCAGGAAAAGACTCTCCAGTTGTAACAAACATTGAACAAAAACAAGGGGCAGCTCCATGGGAGGTAATTCAGTACTCTTTTTCTATTACTACCTACTACAATGACCAAGTACACCGCCCTCTTGAAAAACAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3741 DUF4378 VARLMGL

Protein Analysis

719

Amino Acids

80.72

Weight (kDa)

6.71

Isoelectric Point (pI)

69.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VARLMGL	PF14383	108 - 125	2.6e-06	DUF761-associated sequence motif
DUF3741	PF12552	216 - 260	6.9e-24	Protein of unknown function (DUF3741)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004964)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20240 AT4G28760 AT4G28760
fragaria_vesca	FvH4_2g19940 FvH4_2g19940 FvH4_2g19940 FvH4_2g19940 FvH4_2g19940 FvH4_2g19940
malus_domestica	MD05G1183600.v1.1 MD10G1171400.v1.1
prunus_persica	Prupe.8G209800_v2.0.a1 Prupe.8G209800_v2.0.a1 Prupe.8G209800_v2.0.a1 Prupe.8G209800_v2.0.a1 Prupe.8G209800_v2.0.a1
pyrus_communis	pycom05g16860 pycom10g14780
rosa_chinensis	RchiOBHm_Chr6g0285601
rosa_laevigata	RLG00000012623
rosa_multiflora	Rmu_sc0001356.1_g000026 Rmu_sc0017770.1_g000008
rosa_rugosa	Rorug06G0176000.1 Rorug06G0176100 Rorug06G0176100
rosa_samantha	Rh6AG287400 Rh6BG288800 Rh6CG289900 Rh6DG282600
rosa_wichuraiana	Rw6G024710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	922, 1322
AccIII	TCCGGA	1 cut(s)	514
AciI	CCGC	4 cut(s)	887, 1709, 1754, 2137
AclWI	GGATC	3 cut(s)	645, 1362, 1733
AcsI	RAATTY	4 cut(s)	500, 707, 775, 1489
AcuI	CTGAAG	2 cut(s)	1381, 2007
AfaI	GTAC	5 cut(s)	424, 444, 1528, 2096, 2133
AfiI	CCNNNNNNNGG	4 cut(s)	50, 599, 1046, 1213
AgsI	TTSAA	9 cut(s)	384, 873, 1220, 1644, 1736, 1813, 1991, 2057, 2147
AjnI	CCWGG	2 cut(s)	57, 1045
AluBI	AGCT	6 cut(s)	106, 1301, 1521, 1657, 1780, 2075
AluI	AGCT	6 cut(s)	106, 1301, 1521, 1657, 1780, 2075
Alw21I	GWGCWC	1 cut(s)	1523
Alw26I	GTCTC	2 cut(s)	824, 1828
AlwI	GGATC	3 cut(s)	645, 1362, 1733
Ama87I	CYCGRG	1 cut(s)	49
Aor13HI	TCCGGA	1 cut(s)	514
AoxI	GGCC	4 cut(s)	1037, 1068, 1204, 1467
ApeKI	GCWGC	9 cut(s)	18, 106, 460, 493, 553, 944, 1298, 1374, 2072
ApoI	RAATTY	4 cut(s)	500, 707, 775, 1489
AseI	ATTAAT	2 cut(s)	621, 1362
AspLEI	GCGC	1 cut(s)	28
AspS9I	GGNCC	2 cut(s)	1204, 1467
AsuC2I	CCSGG	4 cut(s)	50, 51, 88, 1941
AsuHPI	GGTGA	5 cut(s)	582, 1086, 1121, 1323, 1547
AvaI	CYCGRG	1 cut(s)	49
BaeI	ACNNNNGTAYC	2 cut(s)	75, 108
BanII	GRGCYC	1 cut(s)	1523
BarI	GAAGNNNNNNTAC	2 cut(s)	557, 589
BbsI	GAAGAC	2 cut(s)	572, 1058
Bbv12I	GWGCWC	1 cut(s)	1523
BbvI	GCAGC	9 cut(s)	30, 93, 472, 505, 565, 956, 1310, 1386, 2084
BcgI	CGANNNNNNTGC	2 cut(s)	256, 290
BciT130I	CCWGG	2 cut(s)	59, 1047
BclI	TGATCA	1 cut(s)	985
BcnI	CCSGG	4 cut(s)	50, 51, 88, 1941
BcoDI	GTCTC	2 cut(s)	824, 1828
BfaI	CTAG	5 cut(s)	96, 1041, 1524, 1671, 1842
BfmI	CTRYAG	2 cut(s)	678, 825
BglI	GCCNNNNNGGC	1 cut(s)	1475
BisI	GCNGC	9 cut(s)	19, 107, 461, 494, 554, 945, 1299, 1375, 2073
BlsI	GCNGC	9 cut(s)	20, 108, 462, 495, 555, 946, 1300, 1376, 2074
BmcAI	AGTACT	1 cut(s)	2096
Bme1390I	CCNGG	6 cut(s)	50, 51, 59, 88, 1047, 1941
BmeT110I	CYCGRG	1 cut(s)	49
BmgT120I	GGNCC	2 cut(s)	1204, 1467
BmiI	GGNNCC	1 cut(s)	181
BmrFI	CCNGG	6 cut(s)	50, 51, 59, 88, 1047, 1941
BmsI	GCATC	6 cut(s)	44, 264, 706, 1530, 1948, 1970
BpiI	GAAGAC	2 cut(s)	572, 1058
BpmI	CTGGAG	3 cut(s)	996, 1401, 2022
BpuEI	CTTGAG	2 cut(s)	130, 1810
BpuMI	CCSGG	4 cut(s)	50, 51, 88, 1941
BsaAI	YACGTR	1 cut(s)	1350
BsaBI	GATNNNNATC	1 cut(s)	1002
BsaJI	CCNNGG	7 cut(s)	49, 58, 87, 1045, 1046, 1071, 2078
BsaWI	WCCGGW	3 cut(s)	514, 1209, 1722
BsaXI	ACNNNNNCTCC	2 cut(s)	1510, 1540
Bsc4I	CCNNNNNNNGG	4 cut(s)	50, 599, 1046, 1213
Bse1I	ACTGG	2 cut(s)	438, 2039
Bse3DI	GCAATG	1 cut(s)	978
Bse8I	GATNNNNATC	1 cut(s)	1002
BseAI	TCCGGA	1 cut(s)	514
BseBI	CCWGG	2 cut(s)	59, 1047
BseDI	CCNNGG	7 cut(s)	49, 58, 87, 1045, 1046, 1071, 2078
BseGI	GGATG	6 cut(s)	15, 59, 458, 541, 1066, 1588
BseJI	GATNNNNATC	1 cut(s)	1002
BseLI	CCNNNNNNNGG	4 cut(s)	50, 599, 1046, 1213
BseMI	GCAATG	1 cut(s)	978
BseMII	CTCAG	9 cut(s)	575, 944, 1070, 1324, 1332, 1508, 1569, 1863, 1979
BseNI	ACTGG	2 cut(s)	438, 2039
BseRI	GAGGAG	3 cut(s)	244, 1139, 1184
BseXI	GCAGC	9 cut(s)	30, 93, 472, 505, 565, 956, 1310, 1386, 2084
BseYI	CCCAGC	1 cut(s)	175
BsgI	GTGCAG	1 cut(s)	372
BshFI	GGCC	4 cut(s)	1039, 1070, 1206, 1469
BsiHKAI	GWGCWC	1 cut(s)	1523
BsiHKCI	CYCGRG	1 cut(s)	49
BsiSI	CCGG	6 cut(s)	50, 87, 515, 1210, 1723, 1940
BslI	CCNNNNNNNGG	4 cut(s)	50, 599, 1046, 1213
BsmAI	GTCTC	2 cut(s)	824, 1828
BsmI	GAATGC	1 cut(s)	495
BsnI	GGCC	4 cut(s)	1039, 1070, 1206, 1469
BsoBI	CYCGRG	1 cut(s)	49
Bsp1286I	GDGCHC	1 cut(s)	1523
Bsp13I	TCCGGA	1 cut(s)	514
Bsp143I	GATC	6 cut(s)	637, 985, 1173, 1354, 1725, 1744
Bsp19I	CCATGG	2 cut(s)	1071, 2078
BspACI	CCGC	4 cut(s)	887, 1709, 1754, 2137
BspANI	GGCC	4 cut(s)	1039, 1070, 1206, 1469
BspCNI	CTCAG	9 cut(s)	574, 943, 1069, 1323, 1331, 1507, 1570, 1864, 1978
BspEI	TCCGGA	1 cut(s)	514
BspHI	TCATGA	1 cut(s)	1747
BspLI	GGNNCC	1 cut(s)	181
BspPI	GGATC	3 cut(s)	645, 1362, 1733
BspQI	GCTCTTC	2 cut(s)	142, 1647
BsrDI	GCAATG	1 cut(s)	978
BsrI	ACTGG	2 cut(s)	438, 2039
BssECI	CCNNGG	7 cut(s)	49, 58, 87, 1045, 1046, 1071, 2078
BssMI	GATC	6 cut(s)	637, 985, 1173, 1354, 1725, 1744
BssT1I	CCWWGG	2 cut(s)	1071, 2078
Bst2UI	CCWGG	2 cut(s)	59, 1047
Bst4CI	ACNGT	1 cut(s)	847
Bst6I	CTCTTC	3 cut(s)	142, 819, 1647
BstBAI	YACGTR	1 cut(s)	1350
BstC8I	GCNNGC	2 cut(s)	406, 1545
BstDSI	CCRYGG	2 cut(s)	1071, 2078
BstF5I	GGATG	6 cut(s)	15, 59, 458, 541, 1066, 1588
BstHHI	GCGC	1 cut(s)	28
BstKTI	GATC	6 cut(s)	640, 988, 1176, 1357, 1728, 1747
BstMAI	GTCTC	2 cut(s)	824, 1828
BstMBI	GATC	6 cut(s)	637, 985, 1173, 1354, 1725, 1744
BstMWI	GCNNNNNNNGC	2 cut(s)	1475, 1883
BstNI	CCWGG	2 cut(s)	59, 1047
BstNSI	RCATGY	2 cut(s)	1408, 1511
BstSCI	CCNGG	6 cut(s)	48, 49, 57, 86, 1045, 1939
BstSFI	CTRYAG	2 cut(s)	678, 825
BstV1I	GCAGC	9 cut(s)	30, 93, 472, 505, 565, 956, 1310, 1386, 2084
BstV2I	GAAGAC	2 cut(s)	572, 1058
BstX2I	RGATCY	1 cut(s)	637
BstXI	CCANNNNNNTGG	3 cut(s)	131, 346, 673
BstYI	RGATCY	1 cut(s)	637
BsuRI	GGCC	4 cut(s)	1039, 1070, 1206, 1469
BtgI	CCRYGG	2 cut(s)	1071, 2078
BtsCI	GGATG	6 cut(s)	15, 59, 458, 541, 1066, 1588
BtsIMutI	CAGTG	5 cut(s)	445, 515, 843, 1318, 1973
Cac8I	GCNNGC	2 cut(s)	406, 1545
CciI	TCATGA	1 cut(s)	1747
CfoI	GCGC	1 cut(s)	28
Cfr13I	GGNCC	2 cut(s)	1204, 1467
Cfr9I	CCCGGG	1 cut(s)	49
Csp6I	GTAC	5 cut(s)	423, 443, 1527, 2095, 2132
CspCI	CAANNNNNGTGG	4 cut(s)	285, 320, 1963, 1998
CviQI	GTAC	5 cut(s)	423, 443, 1527, 2095, 2132
DpnI	GATC	6 cut(s)	639, 987, 1175, 1356, 1727, 1746
DpnII	GATC	6 cut(s)	637, 985, 1173, 1354, 1725, 1744
DrdI	GACNNNNNNGTC	2 cut(s)	922, 1322
DseDI	GACNNNNNNGTC	2 cut(s)	922, 1322
Eam1104I	CTCTTC	3 cut(s)	142, 819, 1647
EarI	CTCTTC	3 cut(s)	142, 819, 1647
Ecl136II	GAGCTC	1 cut(s)	1521
Eco130I	CCWWGG	2 cut(s)	1071, 2078
Eco147I	AGGCCT	1 cut(s)	1039
Eco24I	GRGCYC	1 cut(s)	1523
Eco53kI	GAGCTC	1 cut(s)	1521
Eco57I	CTGAAG	2 cut(s)	1381, 2007
Eco88I	CYCGRG	1 cut(s)	49
EcoICRI	GAGCTC	1 cut(s)	1521
EcoRI	GAATTC	1 cut(s)	707
EcoRII	CCWGG	2 cut(s)	57, 1045
EcoT14I	CCWWGG	2 cut(s)	1071, 2078
EcoT22I	ATGCAT	2 cut(s)	15, 1963
EcoT38I	GRGCYC	1 cut(s)	1523
ErhI	CCWWGG	2 cut(s)	1071, 2078
FauI	CCCGC	2 cut(s)	880, 1747
FbaI	TGATCA	1 cut(s)	985
Fnu4HI	GCNGC	9 cut(s)	19, 107, 461, 494, 554, 945, 1299, 1375, 2073
FokI	GGATG	6 cut(s)	22, 66, 465, 548, 1073, 1595
FriOI	GRGCYC	1 cut(s)	1523
Fsp4HI	GCNGC	9 cut(s)	19, 107, 461, 494, 554, 945, 1299, 1375, 2073
FspBI	CTAG	5 cut(s)	96, 1041, 1524, 1671, 1842
GlaI	GCGC	1 cut(s)	27
GluI	GCNGC	9 cut(s)	19, 107, 461, 494, 554, 945, 1299, 1375, 2073
GsaI	CCCAGC	1 cut(s)	179
GsuI	CTGGAG	3 cut(s)	996, 1401, 2022
HaeIII	GGCC	4 cut(s)	1039, 1070, 1206, 1469
HapII	CCGG	6 cut(s)	50, 87, 515, 1210, 1723, 1940
HhaI	GCGC	1 cut(s)	28
Hin6I	GCGC	1 cut(s)	26
HinP1I	GCGC	1 cut(s)	26
HincII	GTYRAC	2 cut(s)	73, 1569
HindII	GTYRAC	2 cut(s)	73, 1569
HpaII	CCGG	6 cut(s)	50, 87, 515, 1210, 1723, 1940
HphI	GGTGA	5 cut(s)	582, 1086, 1121, 1323, 1547
Hpy166II	GTNNAC	4 cut(s)	73, 443, 1569, 2134
Hpy8I	GTNNAC	4 cut(s)	73, 443, 1569, 2134
HpyAV	CCTTC	7 cut(s)	55, 592, 597, 1405, 1509, 1605, 1985
HpyCH4III	ACNGT	1 cut(s)	847
HpyCH4IV	ACGT	2 cut(s)	758, 1349
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1475, 1883
HpySE526I	ACGT	2 cut(s)	758, 1349
HspAI	GCGC	1 cut(s)	26
Kpn2I	TCCGGA	1 cut(s)	514
Ksp22I	TGATCA	1 cut(s)	985
Kzo9I	GATC	6 cut(s)	637, 985, 1173, 1354, 1725, 1744
LguI	GCTCTTC	2 cut(s)	142, 1647
LmnI	GCTCC	7 cut(s)	517, 890, 1015, 1126, 1498, 1518, 2080
Lsp1109I	GCAGC	9 cut(s)	30, 93, 472, 505, 565, 956, 1310, 1386, 2084
LweI	GCATC	6 cut(s)	44, 264, 706, 1530, 1948, 1970
MaeI	CTAG	5 cut(s)	96, 1041, 1524, 1671, 1842
MaeII	ACGT	2 cut(s)	758, 1349
MaeIII	GTNAC	7 cut(s)	166, 572, 588, 1313, 1329, 1592, 2044
MalI	GATC	6 cut(s)	639, 987, 1175, 1356, 1727, 1746
MboI	GATC	6 cut(s)	637, 985, 1173, 1354, 1725, 1744
MflI	RGATCY	1 cut(s)	637
MhlI	GDGCHC	1 cut(s)	1523
MlyI	GAGTC	5 cut(s)	160, 1048, 1310, 1430, 2027
Mph1103I	ATGCAT	2 cut(s)	15, 1963
MroI	TCCGGA	1 cut(s)	514
MseI	TTAA	6 cut(s)	621, 731, 1362, 1481, 1560, 1922
MslI	CAYNNNNRTG	8 cut(s)	129, 438, 451, 798, 1134, 1362, 1429, 1966
MspA1I	CMGCKG	1 cut(s)	1301
MspI	CCGG	6 cut(s)	50, 87, 515, 1210, 1723, 1940
MspR9I	CCNGG	6 cut(s)	50, 51, 59, 88, 1047, 1941
Mva1269I	GAATGC	1 cut(s)	495
MvaI	CCWGG	2 cut(s)	59, 1047
MwoI	GCNNNNNNNGC	2 cut(s)	1475, 1883
NciI	CCSGG	4 cut(s)	50, 51, 88, 1941
NcoI	CCATGG	2 cut(s)	1071, 2078
NdeII	GATC	6 cut(s)	637, 985, 1173, 1354, 1725, 1744
NlaIV	GGNNCC	1 cut(s)	181
NmuCI	GTSAC	4 cut(s)	588, 1313, 1329, 1592
NsiI	ATGCAT	2 cut(s)	15, 1963
NspI	RCATGY	2 cut(s)	1408, 1511
PagI	TCATGA	1 cut(s)	1747
PasI	CCCWGGG	1 cut(s)	1046
PceI	AGGCCT	1 cut(s)	1039
PciSI	GCTCTTC	2 cut(s)	142, 1647
PctI	GAATGC	1 cut(s)	495
PfeI	GAWTC	9 cut(s)	319, 356, 380, 840, 1151, 1616, 1640, 1664, 1895
PfoI	TCCNGGA	1 cut(s)	1939
PkrI	GCNGC	9 cut(s)	20, 108, 462, 495, 555, 946, 1300, 1376, 2074
PleI	GAGTC	5 cut(s)	159, 1048, 1310, 1429, 2027
PpsI	GAGTC	5 cut(s)	159, 1048, 1310, 1429, 2027
Ppu21I	YACGTR	1 cut(s)	1350
PshBI	ATTAAT	2 cut(s)	621, 1362
Psp124BI	GAGCTC	1 cut(s)	1523
Psp6I	CCWGG	2 cut(s)	57, 1045
PspFI	CCCAGC	1 cut(s)	175
PspGI	CCWGG	2 cut(s)	57, 1045
PspN4I	GGNNCC	1 cut(s)	181
PspPI	GGNCC	2 cut(s)	1204, 1467
PsuI	RGATCY	1 cut(s)	637
PvuII	CAGCTG	1 cut(s)	1301
RsaI	GTAC	5 cut(s)	424, 444, 1528, 2096, 2133
RsaNI	GTAC	5 cut(s)	423, 443, 1527, 2095, 2132
RseI	CAYNNNNRTG	8 cut(s)	129, 438, 451, 798, 1134, 1362, 1429, 1966
SacI	GAGCTC	1 cut(s)	1523
SapI	GCTCTTC	2 cut(s)	142, 1647
SaqAI	TTAA	6 cut(s)	621, 731, 1362, 1481, 1560, 1922
SatI	GCNGC	9 cut(s)	19, 107, 461, 494, 554, 945, 1299, 1375, 2073
Sau3AI	GATC	6 cut(s)	637, 985, 1173, 1354, 1725, 1744
Sau96I	GGNCC	2 cut(s)	1204, 1467
ScaI	AGTACT	1 cut(s)	2096
SchI	GAGTC	5 cut(s)	160, 1048, 1310, 1430, 2027
ScrFI	CCNGG	6 cut(s)	50, 51, 59, 88, 1047, 1941
SduI	GDGCHC	1 cut(s)	1523
SfaNI	GCATC	6 cut(s)	44, 264, 706, 1530, 1948, 1970
SfcI	CTRYAG	2 cut(s)	678, 825
SmaI	CCCGGG	1 cut(s)	51
SmiMI	CAYNNNNRTG	8 cut(s)	129, 438, 451, 798, 1134, 1362, 1429, 1966
SmlI	CTYRAG	2 cut(s)	145, 1825
SmoI	CTYRAG	2 cut(s)	145, 1825
SseBI	AGGCCT	1 cut(s)	1039
SsiI	CCGC	4 cut(s)	887, 1709, 1754, 2137
SspMI	CTAG	5 cut(s)	96, 1041, 1524, 1671, 1842
SstI	GAGCTC	1 cut(s)	1523
StuI	AGGCCT	1 cut(s)	1039
StyD4I	CCNGG	6 cut(s)	48, 49, 57, 86, 1045, 1939
StyI	CCWWGG	2 cut(s)	1071, 2078
TaaI	ACNGT	1 cut(s)	847
TaiI	ACGT	2 cut(s)	761, 1352
TaqI	TCGA	4 cut(s)	723, 1199, 1685, 1882
TatI	WGTACW	4 cut(s)	422, 1526, 2094, 2131
TfiI	GAWTC	9 cut(s)	319, 356, 380, 840, 1151, 1616, 1640, 1664, 1895
Tru1I	TTAA	6 cut(s)	621, 731, 1362, 1481, 1560, 1922
Tru9I	TTAA	6 cut(s)	621, 731, 1362, 1481, 1560, 1922
TscAI	CASTG	5 cut(s)	445, 515, 850, 1318, 1973
TseFI	GTSAC	4 cut(s)	588, 1313, 1329, 1592
TseI	GCWGC	9 cut(s)	18, 106, 460, 493, 553, 944, 1298, 1374, 2072
Tsp45I	GTSAC	4 cut(s)	588, 1313, 1329, 1592
TspGWI	ACGGA	2 cut(s)	128, 591
TspMI	CCCGGG	1 cut(s)	49
TspRI	CASTG	5 cut(s)	445, 515, 850, 1318, 1973
VspI	ATTAAT	2 cut(s)	621, 1362
XapI	RAATTY	4 cut(s)	500, 707, 775, 1489
XbaI	TCTAGA	2 cut(s)	95, 1841
XceI	RCATGY	2 cut(s)	1408, 1511
XcmI	CCANNNNNNNNNTGG	2 cut(s)	445, 453
XmaI	CCCGGG	1 cut(s)	49
XspI	CTAG	5 cut(s)	96, 1041, 1524, 1671, 1842
ZrmI	AGTACT	1 cut(s)	2096
Zsp2I	ATGCAT	2 cut(s)	15, 1963

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.