Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0006530

Physical Location & Seq

Genomic Coordinates Forward (+)

22174254 .. 22176023

Gene Structure 1770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g19300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGATTTACATCCCGTGCAGGAAGACCAGCAGGACCCAAAACCCAGAAGCTACTGGAGCAGATGGAGCAAGCAGGACTTCTTCCCAGAACCCTCATTCCAGAACTTCAATTCCTACAAGGACGCCCTCTCCCACACCCCCTCCCGCCTTAAGGACCGCCTCTTCCACCGCTCCTCTGACTCCTTCGAGCTCCTCCAGCTCCCCAAACAGAGCGAGAATCGCATGAAGCGCTGCCTCACCTGGTGGGACTTAATCTGGCTCGGCTTCGGCTCCGTCGTTGGTTCAGGCATTTTCGTCATCACTGGGCAGGCGACCCGCGAGAACGCCGGTCCCGCCATTGTTTTCTCCTACGCCATCTCTGGCTTTTCTGCTTTGCTCTCGGTTTTGTGCTACTCAGAGTTCGCCGTCGAAGTCCCAGTTGCCGGCGGGTCGTTTTCGTATCTTCGGATCGAGTTGGGGGACTTTGTGGCGTTCATTGCTGCGGGGAACATCCTCCTGGAGGCTCTGGTGGGTTCGGCAGGGCTCGGAAGGTCTTGGTCTTCTTACTTTGCCAGCATTTTAAGGACTGATGACACCGATTTTCTGCGAATTCGGGTAAAGTCTCTGCCTGATGGGTTTAATCTTCTGGATCCAATAGCTGTTGTGGTGCTTTTGGTTGCTAATAGTATTGCAATGAGTGGGACTAGGAGGACTTCTGTGTTGAATTGGATTGCTTCCATTGCTAGTGGTTTGATCATAGTGTTTATATTGATTGTTGGGTTTGTTAAGGGTAAGACTGAGAATTTGGTGCCCTTTTTCCCATATGGGGCAAAAGGCGTTTTTGAGGCGGCTGCTGTTGTGTACTGGTCTTATACTGGTTTCGATATGGTTGCTAATATGGCCGAGGAAGCGAAGAAACCCTCGAGGGACATACCGGTTGGTTTGGTGGGTTCTATGAGTCTGATCGCAGTGGTTTATTGCTTGATGGCTTTGGTGTTGTGTATGATGCAGAAATACACTCAAATCGATAAGGATGCCGCTTATTCGGTTGCTTTTGAGGCAATTGGGATGAGTTGGGCTAAGTACTTAGTGAGTATATGTGCCCTCAAGGGAATGACTACAAGTCTGCTGGTTGGCTCTATGGGGCAAGCTAGGTATACCACTCAGATTGCAAGAGCGCATATGATTTCACCCTGGTTTGCTTTGGTTCACCCGAAAACTGGAACCCCCATTTATGCTACTGCATTGGTAACCTTAATTAGTGCAGTTGTTGCTCTATTCACAAGTCTGGATGTGCTGTCAAGCGTCTTCTCTTTCAGTACGCTCTGCATATTTATGTTTGTGGCTATCGCATTGCTTGTGAGGCGATATTATGTTAAGGATGTGACACCAACAACTGATTTGGTCCAATTCCTTGTATGTTTGTTCTTAATAATCGGTGGTTCTACTGGAATTACAGCGGTTTGGAATAAAGGCATGCGCGGGTGGGTTCGGTATGTTGTGCTTTCTGTGATTTGGTTATCGGGGACTTTGTGGATGGCATTGCTTCCAAAGCACCGAGTTCCTAAGGTTTGGGGGGTTCCACTTGTTCCGTGGTTGCCTGCATTGTCGATTGGAATTAATGTTTTTCTCATTGGGTCTCTGGGTTATGTTGCATTCTTGAGGTTTTTCATTTGCACTGCGGTCATGGTTCTCTACTATTTGTTCGTCGGTGTTCATGCAACATATGATGTCGCTCACCAGATTGAACAAGAACCAAAAACTGAACAGGGAAATGAAATCGCTAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0016020 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

590

Amino Acids

65.07

Weight (kDa)

8.73

Isoelectric Point (pI)

36.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	79 - 471	2.4e-48	Amino acid permease
AA_permease	PF00324	84 - 469	3.1e-27	Amino acid permease
AA_permease_C	PF13906	518 - 567	1.8e-15	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17120
fragaria_vesca	FvH4_3g16770
malus_domestica	MD05G1206900.v1.1
prunus_persica	Prupe.4G150300_v2.0.a1
pyrus_communis	pycom05g19300 pycom10g16780
rosa_chinensis	RchiOBHm_Chr5g0028011 RchiOBHm_Chr5g0028021
rosa_laevigata	RLG00000033057 RLG00000033058
rosa_multiflora	Rmu_sc0009432.1_g000015 Rmu_sc0009432.1_g000016 Rmu_sc0009432.1_g000017 Rmu_sc0009561.1_g000001
rosa_roxburghii	Rroxscaffold_1G00051640 Rroxscaffold_1G00051650
rosa_rugosa	Rorug05G0103300 Rorug05G0103500
rosa_samantha	Rh5AG197100 Rh5BG195200 Rh5BG195300 Rh5CG215300 Rh5DG196800 Rh5DG196900
rosa_wichuraiana	Rw5G017960 Rw5G017970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	901
AccB1I	GGYRCC	1 cut(s)	787
AccBSI	CCGCTC	1 cut(s)	171
AccI	GTMKAC	1 cut(s)	1136
AccII	CGCG	2 cut(s)	318, 1461
AclWI	GGATC	3 cut(s)	455, 623, 636
AcoI	YGGCCR	1 cut(s)	879
AcsI	RAATTY	2 cut(s)	588, 781
AcyI	GRCGYC	1 cut(s)	123
AdeI	CACNNNGTG	1 cut(s)	243
AfaI	GTAC	3 cut(s)	842, 1064, 1300
AfeI	AGCGCT	1 cut(s)	230
AfiI	CCNNNNNNNGG	5 cut(s)	151, 422, 499, 805, 1199
AflII	CTTAAG	1 cut(s)	149
AgeI	ACCGGT	1 cut(s)	913
AgsI	TTSAA	3 cut(s)	109, 703, 1727
AhdI	GACNNNNNGTC	1 cut(s)	1101
AjnI	CCWGG	3 cut(s)	239, 495, 1172
AloI	GAACNNNNNNTCC	4 cut(s)	81, 95, 113, 127
AluBI	AGCT	5 cut(s)	51, 190, 199, 638, 1130
AluI	AGCT	5 cut(s)	51, 190, 199, 638, 1130
Alw21I	GWGCWC	1 cut(s)	192
Alw26I	GTCTC	2 cut(s)	606, 1623
AlwI	GGATC	3 cut(s)	455, 623, 636
Ama87I	CYCGRG	1 cut(s)	901
Aor51HI	AGCGCT	1 cut(s)	230
AoxI	GGCC	1 cut(s)	879
ApeKI	GCWGC	3 cut(s)	231, 479, 830
ApoI	RAATTY	2 cut(s)	588, 781
ArsI	GACNNNNNNTTYG	2 cut(s)	766, 798
AseI	ATTAAT	1 cut(s)	1599
AsiGI	ACCGGT	1 cut(s)	913
AspLEI	GCGC	3 cut(s)	231, 1159, 1461
AspS9I	GGNCC	4 cut(s)	34, 154, 329, 1384
AsuHPI	GGTGA	4 cut(s)	229, 1161, 1181, 1709
AvaI	CYCGRG	1 cut(s)	901
AvaII	GGWCC	4 cut(s)	34, 154, 329, 1384
AxyI	CCTNAGG	1 cut(s)	1545
BaeGI	GKGCMC	2 cut(s)	792, 1084
BamHI	GGATCC	1 cut(s)	628
BanI	GGYRCC	1 cut(s)	787
BanII	GRGCYC	2 cut(s)	192, 525
BbsI	GAAGAC	3 cut(s)	30, 531, 1279
Bbv12I	GWGCWC	1 cut(s)	192
BbvI	GCAGC	3 cut(s)	218, 466, 817
BccI	CCATC	5 cut(s)	57, 362, 605, 958, 1510
BceAI	ACGGC	1 cut(s)	389
BcgI	CGANNNNNNTGC	4 cut(s)	851, 885, 995, 1029
BciT130I	CCWGG	3 cut(s)	241, 497, 1174
BclI	TGATCA	1 cut(s)	732
BcoDI	GTCTC	2 cut(s)	606, 1623
BfaI	CTAG	4 cut(s)	684, 723, 1131, 1764
BfoI	RGCGCY	1 cut(s)	232
BfrI	CTTAAG	1 cut(s)	149
BisI	GCNGC	5 cut(s)	232, 480, 828, 831, 1017
BlsI	GCNGC	5 cut(s)	233, 481, 829, 832, 1018
BmcAI	AGTACT	1 cut(s)	1064
Bme1390I	CCNGG	3 cut(s)	241, 497, 1174
Bme18I	GGWCC	4 cut(s)	34, 154, 329, 1384
BmeRI	GACNNNNNGTC	1 cut(s)	1101
BmeT110I	CYCGRG	1 cut(s)	901
BmgT120I	GGNCC	4 cut(s)	34, 154, 329, 1384
BmiI	GGNNCC	7 cut(s)	36, 271, 331, 630, 789, 1204, 1560
BmrFI	CCNGG	3 cut(s)	241, 497, 1174
BmrI	ACTGGG	2 cut(s)	312, 410
BmsI	GCATC	2 cut(s)	975, 1003
BmuI	ACTGGG	2 cut(s)	312, 410
BpiI	GAAGAC	3 cut(s)	30, 531, 1279
BpmI	CTGGAG	3 cut(s)	76, 179, 518
BpuEI	CTTGAG	2 cut(s)	1070, 1660
Bsa29I	ATCGAT	1 cut(s)	1005
BsaBI	GATNNNNATC	1 cut(s)	9
BsaHI	GRCGYC	1 cut(s)	123
BsaI	GGTCTC	1 cut(s)	1623
BsaJI	CCNNGG	3 cut(s)	882, 1172, 1571
BsaWI	WCCGGW	1 cut(s)	913
BsaXI	ACNNNNNCTCC	4 cut(s)	113, 125, 143, 155
Bsc4I	CCNNNNNNNGG	5 cut(s)	151, 422, 499, 805, 1199
Bse118I	RCCGGY	3 cut(s)	326, 422, 913
Bse1I	ACTGG	7 cut(s)	59, 307, 416, 848, 859, 1204, 1432
Bse21I	CCTNAGG	1 cut(s)	1545
Bse3DI	GCAATG	5 cut(s)	474, 678, 717, 1331, 1520
Bse8I	GATNNNNATC	1 cut(s)	9
BseBI	CCWGG	3 cut(s)	241, 497, 1174
BseCI	ATCGAT	1 cut(s)	1005
BseDI	CCNNGG	3 cut(s)	882, 1172, 1571
BseGI	GGATG	7 cut(s)	10, 489, 1018, 1053, 1276, 1366, 1521
BseJI	GATNNNNATC	1 cut(s)	9
BseLI	CCNNNNNNNGG	5 cut(s)	151, 422, 499, 805, 1199
BseMI	GCAATG	5 cut(s)	474, 678, 717, 1331, 1520
BseMII	CTCAG	3 cut(s)	408, 768, 1157
BseNI	ACTGG	7 cut(s)	59, 307, 416, 848, 859, 1204, 1432
BseRI	GAGGAG	2 cut(s)	163, 182
BseSI	GKGCMC	2 cut(s)	792, 1084
BseXI	GCAGC	3 cut(s)	218, 466, 817
BsgI	GTGCAG	2 cut(s)	38, 1263
Bsh1236I	CGCG	2 cut(s)	318, 1461
BshFI	GGCC	1 cut(s)	881
BshNI	GGYRCC	1 cut(s)	787
BshTI	ACCGGT	1 cut(s)	913
BshVI	ATCGAT	1 cut(s)	1005
BsiHKAI	GWGCWC	1 cut(s)	192
BsiHKCI	CYCGRG	1 cut(s)	901
BsiSI	CCGG	3 cut(s)	327, 423, 914
BslFI	GGGAC	7 cut(s)	260, 315, 398, 473, 694, 920, 1519
BslI	CCNNNNNNNGG	5 cut(s)	151, 422, 499, 805, 1199
BsmAI	GTCTC	2 cut(s)	606, 1623
BsmFI	GGGAC	7 cut(s)	260, 315, 398, 473, 694, 920, 1519
BsmI	GAATGC	1 cut(s)	1634
BsnI	GGCC	1 cut(s)	881
Bso31I	GGTCTC	1 cut(s)	1623
BsoBI	CYCGRG	1 cut(s)	901
Bsp1286I	GDGCHC	4 cut(s)	192, 525, 792, 1084
Bsp143I	GATC	4 cut(s)	447, 628, 732, 942
BspANI	GGCC	1 cut(s)	881
BspCNI	CTCAG	3 cut(s)	407, 769, 1156
BspDI	ATCGAT	1 cut(s)	1005
BspFNI	CGCG	2 cut(s)	318, 1461
BspLI	GGNNCC	7 cut(s)	36, 271, 331, 630, 789, 1204, 1560
BspPI	GGATC	3 cut(s)	455, 623, 636
BspT107I	GGYRCC	1 cut(s)	787
BspTI	CTTAAG	1 cut(s)	149
BspTNI	GGTCTC	1 cut(s)	1623
BsrBI	CCGCTC	1 cut(s)	171
BsrDI	GCAATG	5 cut(s)	474, 678, 717, 1331, 1520
BsrFI	RCCGGY	3 cut(s)	326, 422, 913
BsrI	ACTGG	7 cut(s)	59, 307, 416, 848, 859, 1204, 1432
BssAI	RCCGGY	3 cut(s)	326, 422, 913
BssECI	CCNNGG	3 cut(s)	882, 1172, 1571
BssMI	GATC	4 cut(s)	447, 628, 732, 942
BssNAI	GTATAC	1 cut(s)	1137
BssNI	GRCGYC	1 cut(s)	123
Bst1107I	GTATAC	1 cut(s)	1137
Bst2UI	CCWGG	3 cut(s)	241, 497, 1174
Bst6I	CTCTTC	1 cut(s)	167
BstACI	GRCGYC	1 cut(s)	123
BstAFI	CTTAAG	1 cut(s)	149
BstAPI	GCANNNNNTGC	1 cut(s)	1250
BstC8I	GCNNGC	7 cut(s)	71, 309, 424, 553, 1128, 1457, 1581
BstDEI	CTNAG	6 cut(s)	394, 777, 1059, 1066, 1143, 1545
BstDSI	CCRYGG	1 cut(s)	1571
BstEII	GGTNACC	1 cut(s)	1228
BstENI	CCTNNNNNAGG	1 cut(s)	497
BstF5I	GGATG	7 cut(s)	10, 489, 1018, 1053, 1276, 1366, 1521
BstFNI	CGCG	2 cut(s)	318, 1461
BstH2I	RGCGCY	1 cut(s)	232
BstHHI	GCGC	3 cut(s)	231, 1159, 1461
BstKTI	GATC	4 cut(s)	450, 631, 735, 945
BstMAI	GTCTC	2 cut(s)	606, 1623
BstMBI	GATC	4 cut(s)	447, 628, 732, 942
BstNI	CCWGG	3 cut(s)	241, 497, 1174
BstNSI	RCATGY	1 cut(s)	1459
BstPI	GGTNACC	1 cut(s)	1228
BstSCI	CCNGG	3 cut(s)	239, 495, 1172
BstSLI	GKGCMC	2 cut(s)	792, 1084
BstUI	CGCG	2 cut(s)	318, 1461
BstV1I	GCAGC	3 cut(s)	218, 466, 817
BstV2I	GAAGAC	3 cut(s)	30, 531, 1279
BstX2I	RGATCY	1 cut(s)	628
BstYI	RGATCY	1 cut(s)	628
BstZ17I	GTATAC	1 cut(s)	1137
Bsu15I	ATCGAT	1 cut(s)	1005
Bsu36I	CCTNAGG	1 cut(s)	1545
BsuRI	GGCC	1 cut(s)	881
BsuTUI	ATCGAT	1 cut(s)	1005
BtgI	CCRYGG	1 cut(s)	1571
BtsCI	GGATG	7 cut(s)	10, 489, 1018, 1053, 1276, 1366, 1521
BtsI	GCAGTG	2 cut(s)	954, 1656
BtsIMutI	CAGTG	3 cut(s)	300, 954, 1656
Cac8I	GCNNGC	7 cut(s)	71, 309, 424, 553, 1128, 1457, 1581
CfoI	GCGC	3 cut(s)	231, 1159, 1461
Cfr10I	RCCGGY	3 cut(s)	326, 422, 913
Cfr13I	GGNCC	4 cut(s)	34, 154, 329, 1384
ClaI	ATCGAT	1 cut(s)	1005
CseI	GACGC	2 cut(s)	131, 1273
CsiI	ACCWGGT	1 cut(s)	239
Csp6I	GTAC	3 cut(s)	841, 1063, 1299
CspAI	ACCGGT	1 cut(s)	913
CspCI	CAANNNNNGTGG	2 cut(s)	1129, 1164
CviAII	CATG	4 cut(s)	223, 1456, 1666, 1697
CviQI	GTAC	3 cut(s)	841, 1063, 1299
DdeI	CTNAG	6 cut(s)	394, 777, 1059, 1066, 1143, 1545
DpnI	GATC	4 cut(s)	449, 630, 734, 944
DpnII	GATC	4 cut(s)	447, 628, 732, 942
DraIII	CACNNNGTG	1 cut(s)	243
DriI	GACNNNNNGTC	1 cut(s)	1101
EaeI	YGGCCR	1 cut(s)	879
Eam1104I	CTCTTC	1 cut(s)	167
Eam1105I	GACNNNNNGTC	1 cut(s)	1101
EarI	CTCTTC	1 cut(s)	167
Ecl136II	GAGCTC	1 cut(s)	190
Eco24I	GRGCYC	2 cut(s)	192, 525
Eco31I	GGTCTC	1 cut(s)	1623
Eco47I	GGWCC	4 cut(s)	34, 154, 329, 1384
Eco47III	AGCGCT	1 cut(s)	230
Eco53kI	GAGCTC	1 cut(s)	190
Eco81I	CCTNAGG	1 cut(s)	1545
Eco88I	CYCGRG	1 cut(s)	901
Eco91I	GGTNACC	1 cut(s)	1228
EcoICRI	GAGCTC	1 cut(s)	190
EcoNI	CCTNNNNNAGG	1 cut(s)	497
EcoO109I	RGGNCCY	1 cut(s)	34
EcoO65I	GGTNACC	1 cut(s)	1228
EcoRI	GAATTC	1 cut(s)	588
EcoRII	CCWGG	3 cut(s)	239, 495, 1172
EcoT38I	GRGCYC	2 cut(s)	192, 525
FaeI	CATG	4 cut(s)	226, 1459, 1669, 1700
FalI	AAGNNNNNCTT	2 cut(s)	62, 94
FaqI	GGGAC	7 cut(s)	260, 315, 398, 473, 694, 920, 1519
FatI	CATG	4 cut(s)	222, 1455, 1665, 1696
FauI	CCCGC	6 cut(s)	152, 323, 340, 419, 475, 1454
FauNDI	CATATG	3 cut(s)	802, 1161, 1705
FbaI	TGATCA	1 cut(s)	732
FblI	GTMKAC	1 cut(s)	1136
Fnu4HI	GCNGC	5 cut(s)	232, 480, 828, 831, 1017
FokI	GGATG	6 cut(s)	476, 1025, 1060, 1283, 1373, 1528
FriOI	GRGCYC	2 cut(s)	192, 525
Fsp4HI	GCNGC	5 cut(s)	232, 480, 828, 831, 1017
FspBI	CTAG	4 cut(s)	684, 723, 1131, 1764
GlaI	GCGC	3 cut(s)	230, 1158, 1460
GluI	GCNGC	5 cut(s)	232, 480, 828, 831, 1017
GsuI	CTGGAG	3 cut(s)	76, 179, 518
HaeII	RGCGCY	1 cut(s)	232
HaeIII	GGCC	1 cut(s)	881
HapII	CCGG	3 cut(s)	327, 423, 914
HgaI	GACGC	2 cut(s)	131, 1273
HhaI	GCGC	3 cut(s)	231, 1159, 1461
Hin1I	GRCGYC	1 cut(s)	123
Hin1II	CATG	4 cut(s)	226, 1459, 1669, 1700
Hin6I	GCGC	3 cut(s)	229, 1157, 1459
HinP1I	GCGC	3 cut(s)	229, 1157, 1459
HinfI	GANTC	3 cut(s)	179, 217, 937
HpaII	CCGG	3 cut(s)	327, 423, 914
HphI	GGTGA	4 cut(s)	229, 1161, 1181, 1709
Hpy166II	GTNNAC	3 cut(s)	841, 1137, 1189
Hpy188I	TCNGA	6 cut(s)	178, 397, 447, 527, 942, 1146
Hpy188III	TCNNGA	4 cut(s)	100, 626, 1268, 1639
Hpy8I	GTNNAC	3 cut(s)	841, 1137, 1189
Hpy99I	CGWCG	3 cut(s)	278, 410, 1691
HpyAV	CCTTC	2 cut(s)	193, 522
HpyF3I	CTNAG	6 cut(s)	394, 777, 1059, 1066, 1143, 1545
Hsp92I	GRCGYC	1 cut(s)	123
Hsp92II	CATG	4 cut(s)	226, 1459, 1669, 1700
HspAI	GCGC	3 cut(s)	229, 1157, 1459
KroI	GCCGGC	1 cut(s)	422
KroNI	GCCGGC	1 cut(s)	424
Ksp22I	TGATCA	1 cut(s)	732
Kzo9I	GATC	4 cut(s)	447, 628, 732, 942
LmnI	GCTCC	6 cut(s)	57, 66, 176, 195, 204, 275
Lsp1109I	GCAGC	3 cut(s)	218, 466, 817
LweI	GCATC	2 cut(s)	975, 1003
MabI	ACCWGGT	1 cut(s)	239
MaeI	CTAG	4 cut(s)	684, 723, 1131, 1764
MaeIII	GTNAC	2 cut(s)	1228, 1363
MalI	GATC	4 cut(s)	449, 630, 734, 944
MbiI	CCGCTC	1 cut(s)	171
MboI	GATC	4 cut(s)	447, 628, 732, 942
MboII	GAAGA	8 cut(s)	35, 73, 154, 434, 531, 614, 904, 1279
MfeI	CAATTG	1 cut(s)	1041
MflI	RGATCY	1 cut(s)	628
MhlI	GDGCHC	4 cut(s)	192, 525, 792, 1084
MluCI	AATT	9 cut(s)	109, 588, 703, 781, 1041, 1236, 1388, 1431, 1596
MlyI	GAGTC	2 cut(s)	173, 946
MroNI	GCCGGC	1 cut(s)	422
MslI	CAYNNNNRTG	1 cut(s)	1313
MspA1I	CMGCKG	1 cut(s)	1439
MspCI	CTTAAG	1 cut(s)	149
MspI	CCGG	3 cut(s)	327, 423, 914
MspR9I	CCNGG	3 cut(s)	241, 497, 1174
MunI	CAATTG	1 cut(s)	1041
Mva1269I	GAATGC	1 cut(s)	1634
MvaI	CCWGG	3 cut(s)	241, 497, 1174
MvnI	CGCG	2 cut(s)	318, 1461
NaeI	GCCGGC	1 cut(s)	424
NdeI	CATATG	3 cut(s)	802, 1161, 1705
NdeII	GATC	4 cut(s)	447, 628, 732, 942
NgoMIV	GCCGGC	1 cut(s)	422
NlaIII	CATG	4 cut(s)	226, 1459, 1669, 1700
NlaIV	GGNNCC	7 cut(s)	36, 271, 331, 630, 789, 1204, 1560
NmeAIII	GCCGAG	2 cut(s)	240, 907
NmuCI	GTSAC	1 cut(s)	1363
NspI	RCATGY	1 cut(s)	1459
PaeI	GCATGC	1 cut(s)	1459
PaeR7I	CTCGAG	1 cut(s)	901
PcsI	WCGNNNNNNNCGW	1 cut(s)	273
PctI	GAATGC	1 cut(s)	1634
PdiI	GCCGGC	1 cut(s)	424
PfeI	GAWTC	1 cut(s)	217
PfoI	TCCNGGA	1 cut(s)	495
PinAI	ACCGGT	1 cut(s)	913
PkrI	GCNGC	5 cut(s)	233, 481, 829, 832, 1018
PleI	GAGTC	2 cut(s)	173, 945
PpsI	GAGTC	2 cut(s)	173, 945
PpuMI	RGGWCCY	1 cut(s)	34
PshBI	ATTAAT	1 cut(s)	1599
Psp124BI	GAGCTC	1 cut(s)	192
Psp5II	RGGWCCY	1 cut(s)	34
Psp6I	CCWGG	3 cut(s)	239, 495, 1172
PspEI	GGTNACC	1 cut(s)	1228
PspGI	CCWGG	3 cut(s)	239, 495, 1172
PspN4I	GGNNCC	7 cut(s)	36, 271, 331, 630, 789, 1204, 1560
PspPI	GGNCC	4 cut(s)	34, 154, 329, 1384
PspPPI	RGGWCCY	1 cut(s)	34
PspXI	VCTCGAGB	1 cut(s)	901
PsuI	RGATCY	1 cut(s)	628
RsaI	GTAC	3 cut(s)	842, 1064, 1300
RsaNI	GTAC	3 cut(s)	841, 1063, 1299
RseI	CAYNNNNRTG	1 cut(s)	1313
SacI	GAGCTC	1 cut(s)	192
SatI	GCNGC	5 cut(s)	232, 480, 828, 831, 1017
Sau3AI	GATC	4 cut(s)	447, 628, 732, 942
Sau96I	GGNCC	4 cut(s)	34, 154, 329, 1384
ScaI	AGTACT	1 cut(s)	1064
SchI	GAGTC	2 cut(s)	173, 946
ScrFI	CCNGG	3 cut(s)	241, 497, 1174
SduI	GDGCHC	4 cut(s)	192, 525, 792, 1084
SexAI	ACCWGGT	1 cut(s)	239
SfaNI	GCATC	2 cut(s)	975, 1003
Sfr274I	CTCGAG	1 cut(s)	901
SinI	GGWCC	4 cut(s)	34, 154, 329, 1384
SlaI	CTCGAG	1 cut(s)	901
SmiMI	CAYNNNNRTG	1 cut(s)	1313
SmlI	CTYRAG	4 cut(s)	149, 901, 1085, 1639
SmoI	CTYRAG	4 cut(s)	149, 901, 1085, 1639
SphI	GCATGC	1 cut(s)	1459
Sse9I	AATT	9 cut(s)	109, 588, 703, 781, 1041, 1236, 1388, 1431, 1596
SspMI	CTAG	4 cut(s)	684, 723, 1131, 1764
SstI	GAGCTC	1 cut(s)	192
StyD4I	CCNGG	3 cut(s)	239, 495, 1172
TaqI	TCGA	7 cut(s)	186, 408, 450, 861, 902, 1005, 1589
TasI	AATT	9 cut(s)	109, 588, 703, 781, 1041, 1236, 1388, 1431, 1596
TatI	WGTACW	2 cut(s)	840, 1062
TauI	GCSGC	2 cut(s)	830, 1019
TfiI	GAWTC	1 cut(s)	217
TscAI	CASTG	3 cut(s)	307, 954, 1663
TseFI	GTSAC	1 cut(s)	1363
TseI	GCWGC	3 cut(s)	231, 479, 830
Tsp45I	GTSAC	1 cut(s)	1363
TspDTI	ATGAA	5 cut(s)	239, 463, 1639, 1685, 1770
TspGWI	ACGGA	2 cut(s)	262, 1560
TspRI	CASTG	3 cut(s)	307, 954, 1663
Vha464I	CTTAAG	1 cut(s)	149
VpaK11BI	GGWCC	4 cut(s)	34, 154, 329, 1384
VspI	ATTAAT	1 cut(s)	1599
XagI	CCTNNNNNAGG	1 cut(s)	497
XapI	RAATTY	2 cut(s)	588, 781
XceI	RCATGY	1 cut(s)	1459
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1569
XhoI	CTCGAG	1 cut(s)	901
XmiI	GTMKAC	1 cut(s)	1136
XspI	CTAG	4 cut(s)	684, 723, 1131, 1764
ZrmI	AGTACT	1 cut(s)	1064

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.