Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009561.1

Orthogroup ID

OG0006530

Physical Location & Seq

Genomic Coordinates Forward (+)

688 .. 6550

Gene Structure 5863 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009561.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

atggattcccaaccgcaaccggagcagcaagacccagaacccagaagctactggaaaagatggaccaagcaggacttcttcccggaacccactttccgcaacttgagttcctacaaagacgccctctcccacaccccctcccgcctcaaagaccgcctcctcaaccgctcctccgacaccttcgagctcctccacctcccaaagcaaagcgagcaccacatgcaccgctgcctcacctggtgggacctcatctggctcggcttcggctccgtcgtcggctcgggcattttcgtcatcaccggcgaggccactctcctagccggacccgccattgtattgtcctacgccatctccggcctctcggctctgctctcggtcctctgctacacagaattcgccgtcgaagttcctgttgccggaggatctttctcgtatcttcggatagaattgggagacttcgttgcgttcattgcagccgggaacattctcctcgaggccatggtgggggcggctgggttgggccggtcgtggacttcttacttggccagcatgatcaacaccgacaacaccgactttctgaggtttcgggtaagctctctgcctgatgggttcaatctgttggacccaattgctgttgtggtgcttctggttgctaatggtatagcaatgagcgggacggctcggacttcgatgctgaattggattgcttctattgctagtgcattggttattctgtttattatagtcgtgggttttatttacggcaagactgagaatctgcgccctttcttcccgtatggggcagagggtgttttcaaggctgcggctgtagtttattggtcttatactggttttgacatggttgcgaaccttgcggaggaagttaagcagccctcgaaggatataccagtgggtttgattggttctatgagtctgatcactgtgatttattgcttgatggctttggctttggttatgatgcagaagtacactgaggttagtgcagatgctgcctattcggttgcttttacggctattgggatgaattgggccaagtatttagtgagtatatgtgcccttaagggaatgactacaagcttgctggttggatctcttgggcaagctaggtataccacacagatcgcaagatctcatatgatttcaccctggttcgctctggttcatccgagaactggaacccccatttatgctactatgttggtgaccatagcaagtgcaattgtggccttctttactagtctggatgtgctgtcgagtgtgttttctttcagtacactctctattttcatgtgtgtggctattgcattgcttgtgaggcggtattatgttaaggatctgacagctaaaaacgacctggtcaagtttcttgcaagtttatttgttataattggttcttcaatcgcaattgctgcactttggaacacagatgtgcgaggttgggtttggtatgttgtggctggtgtgatttggttttctgggactttttggatggcattgcttcccaagcaaagagttgccaaggtttggagtgttccactagttccgtgggtgccggcattgtctattggaattaatctcttcctcattgggtctctgggttatgttgcattcttgaggtttgccatttgcactgcagtaatgattgtctactatttgtttgttggtgtgcatgcgacatatgatgttgctcaccagattgagcgacaagaatcaagaactgaggagggaagtgccagtcaacggaacctctcgaaggacccagggggatcagaaaccttcgtcgctggtgaggtagttctagatcgccaaggaggtcgatctcgaccatcactcacatcctcgccttcttcgtcgcctccagggtcgggtagtaggcgtagtcggtgtcggggctttgcagggtggggggagagagggagggagttttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0016020 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

649

Amino Acids

71.16

Weight (kDa)

8.79

Isoelectric Point (pI)

41.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17120
fragaria_vesca	FvH4_3g16770
malus_domestica	MD05G1206900.v1.1
prunus_persica	Prupe.4G150300_v2.0.a1
pyrus_communis	pycom05g19300 pycom10g16780
rosa_chinensis	RchiOBHm_Chr5g0028011 RchiOBHm_Chr5g0028021
rosa_laevigata	RLG00000033057 RLG00000033058
rosa_multiflora	Rmu_sc0009432.1_g000015 Rmu_sc0009432.1_g000016 Rmu_sc0009432.1_g000017 Rmu_sc0009561.1_g000001
rosa_roxburghii	Rroxscaffold_1G00051640 Rroxscaffold_1G00051650
rosa_rugosa	Rorug05G0103300 Rorug05G0103500
rosa_samantha	Rh5AG197100 Rh5BG195200 Rh5BG195300 Rh5CG215300 Rh5DG196800 Rh5DG196900
rosa_wichuraiana	Rw5G017960 Rw5G017970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1406
AbsI	CCTCGAGG	1 cut(s)	491
AccB1I	GGYRCC	1 cut(s)	1570
AccB7I	CCANNNNNTGG	1 cut(s)	1545
AccBSI	CCGCTC	2 cut(s)	168, 672
AccI	GTMKAC	2 cut(s)	1130, 1668
AclWI	GGATC	4 cut(s)	430, 1117, 1362, 1795
AcoI	YGGCCR	1 cut(s)	543
AcsI	RAATTY	1 cut(s)	392
AcyI	GRCGYC	1 cut(s)	120
AdeI	CACNNNGTG	1 cut(s)	240
AfaI	GTAC	2 cut(s)	989, 1294
AfiI	CCNNNNNNNGG	9 cut(s)	416, 504, 799, 877, 1193, 1545, 1761, 1774, 1886
AflII	CTTAAG	1 cut(s)	1079
AgsI	TTSAA	3 cut(s)	613, 817, 1419
AhlI	ACTAGT	2 cut(s)	1256, 1558
AjnI	CCWGG	5 cut(s)	236, 1166, 1374, 1780, 1879
AjuI	GAANNNNNNNTTGG	2 cut(s)	59, 91
AleI	CACNNNNGTG	1 cut(s)	1448
AloI	GAACNNNNNNTCC	2 cut(s)	78, 110
AluBI	AGCT	6 cut(s)	48, 187, 594, 1098, 1124, 1364
AluI	AGCT	6 cut(s)	48, 187, 594, 1098, 1124, 1364
Alw21I	GWGCWC	2 cut(s)	189, 216
Alw26I	GTCTC	2 cut(s)	447, 1617
AlwI	GGATC	4 cut(s)	430, 1117, 1362, 1795
AlwNI	CAGNNNCTG	1 cut(s)	1010
Ama87I	CYCGRG	2 cut(s)	280, 491
AoxI	GGCC	7 cut(s)	306, 355, 495, 520, 543, 1050, 1245
ApeKI	GCWGC	7 cut(s)	25, 228, 473, 821, 889, 1010, 1430
ApoI	RAATTY	1 cut(s)	392
AseI	ATTAAT	1 cut(s)	1593
AspLEI	GCGC	1 cut(s)	783
AspS9I	GGNCC	8 cut(s)	63, 244, 323, 376, 520, 622, 1050, 1777
AsuC2I	CCSGG	2 cut(s)	83, 478
AsuHPI	GGTGA	6 cut(s)	226, 289, 1155, 1234, 1703, 1820
AvaI	CYCGRG	2 cut(s)	280, 491
AvaII	GGWCC	6 cut(s)	63, 244, 323, 376, 622, 1777
BaeGI	GKGCMC	1 cut(s)	1078
BalI	TGGCCA	1 cut(s)	545
BanI	GGYRCC	1 cut(s)	1570
BanII	GRGCYC	1 cut(s)	189
Bbv12I	GWGCWC	2 cut(s)	189, 216
BbvI	GCAGC	7 cut(s)	37, 215, 485, 808, 901, 997, 1417
BccI	CCATC	6 cut(s)	54, 356, 599, 952, 1504, 1855
BceAI	ACGGC	4 cut(s)	383, 693, 778, 1047
BciT130I	CCWGG	5 cut(s)	238, 1168, 1376, 1782, 1881
BclI	TGATCA	2 cut(s)	552, 936
BcnI	CCSGG	2 cut(s)	83, 478
BcoDI	GTCTC	2 cut(s)	447, 1617
BcuI	ACTAGT	2 cut(s)	1256, 1558
BfaI	CTAG	6 cut(s)	317, 717, 1125, 1257, 1559, 1820
BfmI	CTRYAG	2 cut(s)	828, 1653
BfrI	CTTAAG	1 cut(s)	1079
BglII	AGATCT	1 cut(s)	1148
BisI	GCNGC	9 cut(s)	26, 229, 474, 510, 822, 825, 890, 1011, 1431
BlsI	GCNGC	9 cut(s)	27, 230, 475, 511, 823, 826, 891, 1012, 1432
Bme1390I	CCNGG	7 cut(s)	83, 238, 478, 1168, 1376, 1782, 1881
Bme18I	GGWCC	6 cut(s)	63, 244, 323, 376, 622, 1777
BmeT110I	CYCGRG	2 cut(s)	280, 491
BmgT120I	GGNCC	8 cut(s)	63, 244, 323, 376, 520, 622, 1050, 1777
BmiI	GGNNCC	9 cut(s)	87, 245, 268, 325, 624, 1198, 1572, 1766, 1779
BmrFI	CCNGG	7 cut(s)	83, 238, 478, 1168, 1376, 1782, 1881
BmsI	GCATC	3 cut(s)	681, 969, 997
BpmI	CTGGAG	1 cut(s)	1863
BpuEI	CTTGAG	2 cut(s)	124, 1654
BpuMI	CCSGG	2 cut(s)	83, 478
BsaHI	GRCGYC	1 cut(s)	120
BsaI	GGTCTC	1 cut(s)	1617
BsaJI	CCNNGG	8 cut(s)	498, 1166, 1539, 1565, 1780, 1781, 1828, 1880
BsaWI	WCCGGW	1 cut(s)	19
Bsc4I	CCNNNNNNNGG	9 cut(s)	416, 504, 799, 877, 1193, 1545, 1761, 1774, 1886
Bse118I	RCCGGY	3 cut(s)	299, 522, 1573
Bse1I	ACTGG	5 cut(s)	56, 853, 908, 1198, 1755
Bse3DI	GCAATG	4 cut(s)	468, 672, 1325, 1514
BseBI	CCWGG	5 cut(s)	238, 1168, 1376, 1782, 1881
BseDI	CCNNGG	8 cut(s)	498, 1166, 1539, 1565, 1780, 1781, 1828, 1880
BseGI	GGATG	5 cut(s)	1047, 1183, 1270, 1515, 1856
BseLI	CCNNNNNNNGG	9 cut(s)	416, 504, 799, 877, 1193, 1545, 1761, 1774, 1886
BseMI	GCAATG	4 cut(s)	468, 672, 1325, 1514
BseMII	CTCAG	4 cut(s)	569, 762, 984, 1731
BseNI	ACTGG	5 cut(s)	56, 853, 908, 1198, 1755
BseRI	GAGGAG	5 cut(s)	149, 160, 179, 479, 1757
BseSI	GKGCMC	1 cut(s)	1078
BseXI	GCAGC	7 cut(s)	37, 215, 485, 808, 901, 997, 1417
BseYI	CCCAGC	1 cut(s)	512
BsgI	GTGCAG	2 cut(s)	1023, 1416
Bsh1285I	CGRYCG	1 cut(s)	527
BshFI	GGCC	7 cut(s)	308, 357, 497, 522, 545, 1052, 1247
BshNI	GGYRCC	1 cut(s)	1570
BsiEI	CGRYCG	1 cut(s)	527
BsiHKAI	GWGCWC	2 cut(s)	189, 216
BsiHKCI	CYCGRG	2 cut(s)	280, 491
BsiSI	CCGG	9 cut(s)	20, 83, 300, 321, 354, 417, 477, 523, 1574
BslFI	GGGAC	3 cut(s)	257, 688, 1513
BslI	CCNNNNNNNGG	9 cut(s)	416, 504, 799, 877, 1193, 1545, 1761, 1774, 1886
BsmAI	GTCTC	2 cut(s)	447, 1617
BsmFI	GGGAC	3 cut(s)	257, 688, 1513
BsmI	GAATGC	1 cut(s)	1628
BsnI	GGCC	7 cut(s)	308, 357, 497, 522, 545, 1052, 1247
Bso31I	GGTCTC	1 cut(s)	1617
BsoBI	CYCGRG	2 cut(s)	280, 491
Bsp1286I	GDGCHC	3 cut(s)	189, 216, 1078
Bsp19I	CCATGG	1 cut(s)	498
BspANI	GGCC	7 cut(s)	308, 357, 497, 522, 545, 1052, 1247
BspCNI	CTCAG	4 cut(s)	570, 763, 985, 1732
BspLI	GGNNCC	9 cut(s)	87, 245, 268, 325, 624, 1198, 1572, 1766, 1779
BspMAI	CTGCAG	1 cut(s)	1657
BspPI	GGATC	4 cut(s)	430, 1117, 1362, 1795
BspT107I	GGYRCC	1 cut(s)	1570
BspTI	CTTAAG	1 cut(s)	1079
BspTNI	GGTCTC	1 cut(s)	1617
BsrBI	CCGCTC	2 cut(s)	168, 672
BsrDI	GCAATG	4 cut(s)	468, 672, 1325, 1514
BsrFI	RCCGGY	3 cut(s)	299, 522, 1573
BsrI	ACTGG	5 cut(s)	56, 853, 908, 1198, 1755
BssAI	RCCGGY	3 cut(s)	299, 522, 1573
BssECI	CCNNGG	8 cut(s)	498, 1166, 1539, 1565, 1780, 1781, 1828, 1880
BssNAI	GTATAC	1 cut(s)	1131
BssNI	GRCGYC	1 cut(s)	120
BssT1I	CCWWGG	3 cut(s)	498, 1539, 1828
Bst1107I	GTATAC	1 cut(s)	1131
Bst2UI	CCWGG	5 cut(s)	238, 1168, 1376, 1782, 1881
Bst4CI	ACNGT	1 cut(s)	943
Bst6I	CTCTTC	1 cut(s)	1604
BstACI	GRCGYC	1 cut(s)	120
BstAFI	CTTAAG	1 cut(s)	1079
BstAPI	GCANNNNNTGC	3 cut(s)	220, 1010, 1430
BstC8I	GCNNGC	6 cut(s)	212, 547, 1100, 1122, 1575, 1692
BstDEI	CTNAG	4 cut(s)	578, 771, 993, 1740
BstDSI	CCRYGG	2 cut(s)	498, 1565
BstEII	GGTNACC	1 cut(s)	1222
BstENI	CCTNNNNNAGG	2 cut(s)	875, 1772
BstF5I	GGATG	5 cut(s)	1047, 1183, 1270, 1515, 1856
BstHHI	GCGC	1 cut(s)	783
BstMAI	GTCTC	2 cut(s)	447, 1617
BstMCI	CGRYCG	1 cut(s)	527
BstNI	CCWGG	5 cut(s)	238, 1168, 1376, 1782, 1881
BstNSI	RCATGY	2 cut(s)	223, 1694
BstPI	GGTNACC	1 cut(s)	1222
BstSCI	CCNGG	7 cut(s)	81, 236, 476, 1166, 1374, 1780, 1879
BstSFI	CTRYAG	2 cut(s)	828, 1653
BstSLI	GKGCMC	1 cut(s)	1078
BstV1I	GCAGC	7 cut(s)	37, 215, 485, 808, 901, 997, 1417
BstX2I	RGATCY	4 cut(s)	422, 1109, 1148, 1354
BstYI	RGATCY	4 cut(s)	422, 1109, 1148, 1354
BstZ17I	GTATAC	1 cut(s)	1131
BsuRI	GGCC	7 cut(s)	308, 357, 497, 522, 545, 1052, 1247
BtgI	CCRYGG	2 cut(s)	498, 1565
BtsCI	GGATG	5 cut(s)	1047, 1183, 1270, 1515, 1856
BtsI	GCAGTG	1 cut(s)	1650
BtsIMutI	CAGTG	4 cut(s)	915, 939, 990, 1650
Cac8I	GCNNGC	6 cut(s)	212, 547, 1100, 1122, 1575, 1692
CaiI	CAGNNNCTG	1 cut(s)	1010
CfoI	GCGC	1 cut(s)	783
Cfr10I	RCCGGY	3 cut(s)	299, 522, 1573
Cfr13I	GGNCC	8 cut(s)	63, 244, 323, 376, 520, 622, 1050, 1777
CseI	GACGC	1 cut(s)	128
CsiI	ACCWGGT	2 cut(s)	236, 1374
Csp6I	GTAC	2 cut(s)	988, 1293
CviAII	CATG	6 cut(s)	220, 499, 550, 859, 1309, 1691
CviQI	GTAC	2 cut(s)	988, 1293
DdeI	CTNAG	4 cut(s)	578, 771, 993, 1740
DraIII	CACNNNGTG	1 cut(s)	240
EaeI	YGGCCR	1 cut(s)	543
Eam1104I	CTCTTC	1 cut(s)	1604
EarI	CTCTTC	1 cut(s)	1604
Ecl136II	GAGCTC	1 cut(s)	187
Eco130I	CCWWGG	3 cut(s)	498, 1539, 1828
Eco24I	GRGCYC	1 cut(s)	189
Eco31I	GGTCTC	1 cut(s)	1617
Eco47I	GGWCC	6 cut(s)	63, 244, 323, 376, 622, 1777
Eco53kI	GAGCTC	1 cut(s)	187
Eco88I	CYCGRG	2 cut(s)	280, 491
Eco91I	GGTNACC	1 cut(s)	1222
EcoICRI	GAGCTC	1 cut(s)	187
EcoNI	CCTNNNNNAGG	2 cut(s)	875, 1772
EcoO109I	RGGNCCY	2 cut(s)	244, 1777
EcoO65I	GGTNACC	1 cut(s)	1222
EcoRI	GAATTC	1 cut(s)	392
EcoRII	CCWGG	5 cut(s)	236, 1166, 1374, 1780, 1879
EcoT14I	CCWWGG	3 cut(s)	498, 1539, 1828
EcoT38I	GRGCYC	1 cut(s)	189
ErhI	CCWWGG	3 cut(s)	498, 1539, 1828
FaeI	CATG	6 cut(s)	223, 502, 553, 862, 1312, 1694
FalI	AAGNNNNNCTT	2 cut(s)	59, 91
FaqI	GGGAC	3 cut(s)	257, 688, 1513
FatI	CATG	6 cut(s)	219, 498, 549, 858, 1308, 1690
FauI	CCCGC	3 cut(s)	149, 334, 665
FauNDI	CATATG	2 cut(s)	1155, 1699
FbaI	TGATCA	2 cut(s)	552, 936
FblI	GTMKAC	2 cut(s)	1130, 1668
Fnu4HI	GCNGC	9 cut(s)	26, 229, 474, 510, 822, 825, 890, 1011, 1431
FokI	GGATG	5 cut(s)	1054, 1170, 1277, 1522, 1843
FriOI	GRGCYC	1 cut(s)	189
Fsp4HI	GCNGC	9 cut(s)	26, 229, 474, 510, 822, 825, 890, 1011, 1431
FspBI	CTAG	6 cut(s)	317, 717, 1125, 1257, 1559, 1820
GlaI	GCGC	1 cut(s)	782
GluI	GCNGC	9 cut(s)	26, 229, 474, 510, 822, 825, 890, 1011, 1431
GsaI	CCCAGC	1 cut(s)	516
GsuI	CTGGAG	1 cut(s)	1863
HaeIII	GGCC	7 cut(s)	308, 357, 497, 522, 545, 1052, 1247
HapII	CCGG	9 cut(s)	20, 83, 300, 321, 354, 417, 477, 523, 1574
HgaI	GACGC	1 cut(s)	128
HhaI	GCGC	1 cut(s)	783
Hin1I	GRCGYC	1 cut(s)	120
Hin1II	CATG	6 cut(s)	223, 502, 553, 862, 1312, 1694
Hin6I	GCGC	1 cut(s)	781
HinP1I	GCGC	1 cut(s)	781
HincII	GTYRAC	1 cut(s)	1760
HindII	GTYRAC	1 cut(s)	1760
HindIII	AAGCTT	1 cut(s)	1096
HinfI	GANTC	4 cut(s)	5, 775, 931, 1730
HpaII	CCGG	9 cut(s)	20, 83, 300, 321, 354, 417, 477, 523, 1574
HphI	GGTGA	6 cut(s)	226, 289, 1155, 1234, 1703, 1820
Hpy166II	GTNNAC	6 cut(s)	531, 990, 1131, 1295, 1669, 1760
Hpy188I	TCNGA	8 cut(s)	175, 441, 579, 684, 936, 1188, 1359, 1792
Hpy188III	TCNNGA	6 cut(s)	1262, 1633, 1734, 1771, 1820, 1842
Hpy8I	GTNNAC	6 cut(s)	531, 990, 1131, 1295, 1669, 1760
Hpy99I	CGWCG	5 cut(s)	275, 278, 404, 1805, 1876
HpyAV	CCTTC	6 cut(s)	190, 892, 1258, 1768, 1807, 1875
HpyCH4III	ACNGT	1 cut(s)	943
HpyF3I	CTNAG	4 cut(s)	578, 771, 993, 1740
Hsp92I	GRCGYC	1 cut(s)	120
Hsp92II	CATG	6 cut(s)	223, 502, 553, 862, 1312, 1694
HspAI	GCGC	1 cut(s)	781
KroI	GCCGGC	1 cut(s)	1573
KroNI	GCCGGC	1 cut(s)	1575
Ksp22I	TGATCA	2 cut(s)	552, 936
LmnI	GCTCC	4 cut(s)	22, 173, 192, 272
Lsp1109I	GCAGC	7 cut(s)	37, 215, 485, 808, 901, 997, 1417
LweI	GCATC	3 cut(s)	681, 969, 997
MabI	ACCWGGT	2 cut(s)	236, 1374
MaeI	CTAG	6 cut(s)	317, 717, 1125, 1257, 1559, 1820
MaeIII	GTNAC	1 cut(s)	1222
MbiI	CCGCTC	2 cut(s)	168, 672
MboII	GAAGA	6 cut(s)	70, 428, 781, 1407, 1591, 1860
MfeI	CAATTG	3 cut(s)	627, 1239, 1425
MflI	RGATCY	4 cut(s)	422, 1109, 1148, 1354
MhlI	GDGCHC	3 cut(s)	189, 216, 1078
MlsI	TGGCCA	1 cut(s)	545
MluCI	AATT	9 cut(s)	392, 446, 627, 697, 1045, 1239, 1407, 1425, 1590
MluNI	TGGCCA	1 cut(s)	545
MlyI	GAGTC	1 cut(s)	940
MmeI	TCCRAC	3 cut(s)	198, 600, 1087
Mox20I	TGGCCA	1 cut(s)	545
MroNI	GCCGGC	1 cut(s)	1573
MscI	TGGCCA	1 cut(s)	545
MseI	TTAA	4 cut(s)	885, 1080, 1350, 1593
MslI	CAYNNNNRTG	2 cut(s)	1313, 1448
Msp20I	TGGCCA	1 cut(s)	545
MspA1I	CMGCKG	1 cut(s)	228
MspCI	CTTAAG	1 cut(s)	1079
MspI	CCGG	9 cut(s)	20, 83, 300, 321, 354, 417, 477, 523, 1574
MspR9I	CCNGG	7 cut(s)	83, 238, 478, 1168, 1376, 1782, 1881
MunI	CAATTG	3 cut(s)	627, 1239, 1425
Mva1269I	GAATGC	1 cut(s)	1628
MvaI	CCWGG	5 cut(s)	238, 1168, 1376, 1782, 1881
NaeI	GCCGGC	1 cut(s)	1575
NciI	CCSGG	2 cut(s)	83, 478
NcoI	CCATGG	1 cut(s)	498
NdeI	CATATG	2 cut(s)	1155, 1699
NgoMIV	GCCGGC	1 cut(s)	1573
NlaIII	CATG	6 cut(s)	223, 502, 553, 862, 1312, 1694
NlaIV	GGNNCC	9 cut(s)	87, 245, 268, 325, 624, 1198, 1572, 1766, 1779
NmeAIII	GCCGAG	2 cut(s)	237, 341
NmuCI	GTSAC	1 cut(s)	1222
NspI	RCATGY	2 cut(s)	223, 1694
OliI	CACNNNNGTG	1 cut(s)	1448
PaeI	GCATGC	1 cut(s)	1694
PaeR7I	CTCGAG	1 cut(s)	491
PasI	CCCWGGG	1 cut(s)	1781
PcsI	WCGNNNNNNNCGW	2 cut(s)	270, 1868
PctI	GAATGC	1 cut(s)	1628
PdiI	GCCGGC	1 cut(s)	1575
PfeI	GAWTC	3 cut(s)	5, 775, 1730
PflFI	GACNNNGTC	1 cut(s)	1376
PflMI	CCANNNNNTGG	1 cut(s)	1545
PfoI	TCCNGGA	1 cut(s)	81
PkrI	GCNGC	9 cut(s)	27, 230, 475, 511, 823, 826, 891, 1012, 1432
PleI	GAGTC	1 cut(s)	939
PpsI	GAGTC	1 cut(s)	939
PpuMI	RGGWCCY	2 cut(s)	244, 1777
PshBI	ATTAAT	1 cut(s)	1593
PsiI	TTATAA	1 cut(s)	1406
Psp124BI	GAGCTC	1 cut(s)	189
Psp5II	RGGWCCY	2 cut(s)	244, 1777
Psp6I	CCWGG	5 cut(s)	236, 1166, 1374, 1780, 1879
PspEI	GGTNACC	1 cut(s)	1222
PspFI	CCCAGC	1 cut(s)	512
PspGI	CCWGG	5 cut(s)	236, 1166, 1374, 1780, 1879
PspN4I	GGNNCC	9 cut(s)	87, 245, 268, 325, 624, 1198, 1572, 1766, 1779
PspPI	GGNCC	8 cut(s)	63, 244, 323, 376, 520, 622, 1050, 1777
PspPPI	RGGWCCY	2 cut(s)	244, 1777
PspXI	VCTCGAGB	1 cut(s)	491
PstI	CTGCAG	1 cut(s)	1657
PstNI	CAGNNNCTG	1 cut(s)	1010
PsuI	RGATCY	4 cut(s)	422, 1109, 1148, 1354
PsyI	GACNNNGTC	1 cut(s)	1376
RsaI	GTAC	2 cut(s)	989, 1294
RsaNI	GTAC	2 cut(s)	988, 1293
RseI	CAYNNNNRTG	2 cut(s)	1313, 1448
SacI	GAGCTC	1 cut(s)	189
SaqAI	TTAA	4 cut(s)	885, 1080, 1350, 1593
SatI	GCNGC	9 cut(s)	26, 229, 474, 510, 822, 825, 890, 1011, 1431
Sau96I	GGNCC	8 cut(s)	63, 244, 323, 376, 520, 622, 1050, 1777
SchI	GAGTC	1 cut(s)	940
ScrFI	CCNGG	7 cut(s)	83, 238, 478, 1168, 1376, 1782, 1881
SduI	GDGCHC	3 cut(s)	189, 216, 1078
SexAI	ACCWGGT	2 cut(s)	236, 1374
SfaNI	GCATC	3 cut(s)	681, 969, 997
SfcI	CTRYAG	2 cut(s)	828, 1653
Sfr274I	CTCGAG	1 cut(s)	491
SgrAI	CRCCGGYG	1 cut(s)	299
SinI	GGWCC	6 cut(s)	63, 244, 323, 376, 622, 1777
SlaI	CTCGAG	1 cut(s)	491
SmiMI	CAYNNNNRTG	2 cut(s)	1313, 1448
SmlI	CTYRAG	4 cut(s)	103, 491, 1079, 1633
SmoI	CTYRAG	4 cut(s)	103, 491, 1079, 1633
SpeI	ACTAGT	2 cut(s)	1256, 1558
SphI	GCATGC	1 cut(s)	1694
Sse9I	AATT	9 cut(s)	392, 446, 627, 697, 1045, 1239, 1407, 1425, 1590
SspMI	CTAG	6 cut(s)	317, 717, 1125, 1257, 1559, 1820
SstI	GAGCTC	1 cut(s)	189
StyD4I	CCNGG	7 cut(s)	81, 236, 476, 1166, 1374, 1780, 1879
StyI	CCWWGG	3 cut(s)	498, 1539, 1828
TaaI	ACNGT	1 cut(s)	943
TaqI	TCGA	9 cut(s)	183, 402, 492, 689, 896, 1274, 1772, 1837, 1843
TaqII	GACCGA	1 cut(s)	364
TasI	AATT	9 cut(s)	392, 446, 627, 697, 1045, 1239, 1407, 1425, 1590
TatI	WGTACW	2 cut(s)	987, 1292
TauI	GCSGC	2 cut(s)	512, 827
TfiI	GAWTC	3 cut(s)	5, 775, 1730
Tru1I	TTAA	4 cut(s)	885, 1080, 1350, 1593
Tru9I	TTAA	4 cut(s)	885, 1080, 1350, 1593
TscAI	CASTG	4 cut(s)	915, 946, 997, 1657
TseFI	GTSAC	1 cut(s)	1222
TseI	GCWGC	7 cut(s)	25, 228, 473, 821, 889, 1010, 1430
Tsp45I	GTSAC	1 cut(s)	1222
TspDTI	ATGAA	4 cut(s)	457, 1058, 1172, 1297
TspGWI	ACGGA	3 cut(s)	259, 1554, 1777
TspRI	CASTG	4 cut(s)	915, 946, 997, 1657
Tth111I	GACNNNGTC	1 cut(s)	1376
Van91I	CCANNNNNTGG	1 cut(s)	1545
Vha464I	CTTAAG	1 cut(s)	1079
VpaK11BI	GGWCC	6 cut(s)	63, 244, 323, 376, 622, 1777
VspI	ATTAAT	1 cut(s)	1593
XagI	CCTNNNNNAGG	2 cut(s)	875, 1772
XapI	RAATTY	1 cut(s)	392
XbaI	TCTAGA	1 cut(s)	1819
XceI	RCATGY	2 cut(s)	223, 1694
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1563
XhoI	CTCGAG	1 cut(s)	491
XmiI	GTMKAC	2 cut(s)	1130, 1668
XspI	CTAG	6 cut(s)	317, 717, 1125, 1257, 1559, 1820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.