Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009432.1

Orthogroup ID

OG0006530

Physical Location & Seq

Genomic Coordinates Forward (+)

42692 .. 48981

Gene Structure 6290 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009432.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

atggattcccaaccgcaaccggagcagcaagacccagaacccagaagctactggaaaagatggaccaagcaggacttcttcccggaacccactttccgcaacttgagttcctacaaagacgccctctcccacaccccctcccgcctcaaagaccgcctcctcaaccgctcctccgacaccttcgagctcctccacctcccaaagcaaagcgagcaccacatgcaccgctgcctcacctggtgggacctcatctggctcggcttcggctccgtcgtcggctcgggcattttcgtcatcaccggcgaggccactctcctagccggacccgccattgtattgtcctacgccatctccggcctctcggctctgctctcggtcctctgctacacagaattcgccgtcgaagttcctgttgccggaggatctttctcgtatcttcggatagaattgggagacttcgttgcgttcattgcagccgggaacattctcctcgaggccatggtgggggcggctgggttgggccggtcgtggacttcttacttggccagcatgatcaacaccgacaacaccgactttctgaggtttcgggtaagctctctgcctgatgggttcaatctgttggacccaattgctgttgtggtgcttctggttgctaatggtatagcaatgagcgggacggctcggacttcgatgctgaattggattgcttctattgctagtgcattggttattctgtttattatagtcgtgggttttatttacggcaagactgagaatctgcgccctttcttcccgtatggggcagagggtgttttcaaggctgcggctgtagtttattggtcttatactggttttgacatggttgcgaaccttgcggaggaagttaagcagccctcgaaggatataccagtgggtttgattggttctatgagtctgatcactgtgatttattgcttgatggctttggctttggttatgatgcagaagtacactgaggttagtgcagatgctgcctattcggttgcttttacggctattgggatgaattgggccaagtatttagtgagtatatgtgcccttaagggaatgactacaagcttgctggttggatctcttgggcaagctaggtataccacacagatcgcaagatctcatatgatttcaccctggttcgctctggttcatccgagaactggaacccccatttatgctactatgttggtgaccatagcaagtgcaattgtggccttctttactagtctggatgtgctgtcgagtgtgttttctttcagtacactctctattttcatgtgtgtggctattgcattgcttgtgaggcggtattatgttaaggatctgacagctaaaaacgacctggtcaagtttcttgcaagtttatttgttataattggttcttcaatcgcaattgctgcactttggaacacagatgtgcgaggttgggtttggtatgttgtggctggtgtgatttggttttctgggactttttggatggcattgcttcccaagcaaagagttgccaaggtttggagtgttccactagttccgtgggtgccggcattgtctattggaattaatctcttcctcattgggtctctgggttatgttgcattcttgaggtttgccatttgcactgcagtaatgattgtctactatttgtttgttggtgtgcatgcgacatatgatgttgctcaccagattgagcgacaagaatcaagaactgaggagggaagtgccagtcaacgggcgaatgttgaacatgctcggaggctacagagactgataagttttgcacagcgcttgggcatgtgtctctccactccagattttcaggccaatgtcaaatccaaatccaaatccaactcagctctatttaagttggtaatcgccatttcgtcgtctggaacctctcgaaggacccagggggatcaaaaaccttcgtcgccggtgaggtcgttctggaccaccgaggaggtcgatctcgaccatcactcacatcctcgccttcttcgtcgcctccagggtcgggtagtaggcgcagtcggtgtcggggctttgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0016020 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

692

Amino Acids

76.2

Weight (kDa)

9.17

Isoelectric Point (pI)

38.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17120
fragaria_vesca	FvH4_3g16770
malus_domestica	MD05G1206900.v1.1
prunus_persica	Prupe.4G150300_v2.0.a1
pyrus_communis	pycom05g19300 pycom10g16780
rosa_chinensis	RchiOBHm_Chr5g0028011 RchiOBHm_Chr5g0028021
rosa_laevigata	RLG00000033057 RLG00000033058
rosa_multiflora	Rmu_sc0009432.1_g000015 Rmu_sc0009432.1_g000016 Rmu_sc0009432.1_g000017 Rmu_sc0009561.1_g000001
rosa_roxburghii	Rroxscaffold_1G00051640 Rroxscaffold_1G00051650
rosa_rugosa	Rorug05G0103300 Rorug05G0103500
rosa_samantha	Rh5AG197100 Rh5BG195200 Rh5BG195300 Rh5CG215300 Rh5DG196800 Rh5DG196900
rosa_wichuraiana	Rw5G017960 Rw5G017970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1406
AbsI	CCTCGAGG	1 cut(s)	491
AccB1I	GGYRCC	1 cut(s)	1570
AccB7I	CCANNNNNTGG	1 cut(s)	1545
AccBSI	CCGCTC	2 cut(s)	168, 672
AccI	GTMKAC	2 cut(s)	1130, 1668
AclWI	GGATC	4 cut(s)	430, 1117, 1362, 1953
AcoI	YGGCCR	1 cut(s)	543
AcsI	RAATTY	1 cut(s)	392
AcyI	GRCGYC	1 cut(s)	120
AdeI	CACNNNGTG	1 cut(s)	240
AfaI	GTAC	2 cut(s)	989, 1294
AfeI	AGCGCT	1 cut(s)	1817
AfiI	CCNNNNNNNGG	9 cut(s)	416, 504, 799, 877, 1193, 1545, 1761, 1932, 2044
AflII	CTTAAG	1 cut(s)	1079
AgsI	TTSAA	4 cut(s)	613, 817, 1419, 1775
AhlI	ACTAGT	2 cut(s)	1256, 1558
AjnI	CCWGG	5 cut(s)	236, 1166, 1374, 1938, 2037
AjuI	GAANNNNNNNTTGG	2 cut(s)	59, 91
AleI	CACNNNNGTG	1 cut(s)	1448
AloI	GAACNNNNNNTCC	2 cut(s)	78, 110
AluBI	AGCT	7 cut(s)	48, 187, 594, 1098, 1124, 1364, 1886
AluI	AGCT	7 cut(s)	48, 187, 594, 1098, 1124, 1364, 1886
Alw21I	GWGCWC	2 cut(s)	189, 216
Alw26I	GTCTC	4 cut(s)	447, 1617, 1789, 1835
AlwI	GGATC	4 cut(s)	430, 1117, 1362, 1953
AlwNI	CAGNNNCTG	2 cut(s)	1010, 1798
Ama87I	CYCGRG	2 cut(s)	280, 491
Aor51HI	AGCGCT	1 cut(s)	1817
AoxI	GGCC	8 cut(s)	306, 355, 495, 520, 543, 1050, 1245, 1851
ApeKI	GCWGC	7 cut(s)	25, 228, 473, 821, 889, 1010, 1430
ApoI	RAATTY	1 cut(s)	392
AseI	ATTAAT	1 cut(s)	1593
AspLEI	GCGC	3 cut(s)	783, 1818, 2057
AspS9I	GGNCC	9 cut(s)	63, 244, 323, 376, 520, 622, 1050, 1935, 1980
AsuC2I	CCSGG	2 cut(s)	83, 478
AsuHPI	GGTGA	6 cut(s)	226, 289, 1155, 1234, 1703, 1978
AvaI	CYCGRG	2 cut(s)	280, 491
AvaII	GGWCC	7 cut(s)	63, 244, 323, 376, 622, 1935, 1980
BaeGI	GKGCMC	1 cut(s)	1078
BalI	TGGCCA	1 cut(s)	545
BanI	GGYRCC	1 cut(s)	1570
BanII	GRGCYC	1 cut(s)	189
Bbv12I	GWGCWC	2 cut(s)	189, 216
BbvI	GCAGC	7 cut(s)	37, 215, 485, 808, 901, 997, 1417
BccI	CCATC	6 cut(s)	54, 356, 599, 952, 1504, 2013
BceAI	ACGGC	4 cut(s)	383, 693, 778, 1047
BciT130I	CCWGG	5 cut(s)	238, 1168, 1376, 1940, 2039
BclI	TGATCA	2 cut(s)	552, 936
BcnI	CCSGG	2 cut(s)	83, 478
BcoDI	GTCTC	4 cut(s)	447, 1617, 1789, 1835
BcuI	ACTAGT	2 cut(s)	1256, 1558
BfaI	CTAG	5 cut(s)	317, 717, 1125, 1257, 1559
BfmI	CTRYAG	3 cut(s)	828, 1653, 1790
BfoI	RGCGCY	1 cut(s)	1819
BfrI	CTTAAG	1 cut(s)	1079
BglII	AGATCT	1 cut(s)	1148
BisI	GCNGC	9 cut(s)	26, 229, 474, 510, 822, 825, 890, 1011, 1431
BlsI	GCNGC	9 cut(s)	27, 230, 475, 511, 823, 826, 891, 1012, 1432
Bme1390I	CCNGG	7 cut(s)	83, 238, 478, 1168, 1376, 1940, 2039
Bme18I	GGWCC	7 cut(s)	63, 244, 323, 376, 622, 1935, 1980
BmeT110I	CYCGRG	2 cut(s)	280, 491
BmgT120I	GGNCC	9 cut(s)	63, 244, 323, 376, 520, 622, 1050, 1935, 1980
BmiI	GGNNCC	9 cut(s)	87, 245, 268, 325, 624, 1198, 1572, 1924, 1937
BmrFI	CCNGG	7 cut(s)	83, 238, 478, 1168, 1376, 1940, 2039
BmsI	GCATC	3 cut(s)	681, 969, 997
BpmI	CTGGAG	2 cut(s)	1824, 2021
BpuEI	CTTGAG	2 cut(s)	124, 1654
BpuMI	CCSGG	2 cut(s)	83, 478
BsaHI	GRCGYC	1 cut(s)	120
BsaI	GGTCTC	1 cut(s)	1617
BsaJI	CCNNGG	8 cut(s)	498, 1166, 1539, 1565, 1938, 1939, 1986, 2038
BsaWI	WCCGGW	1 cut(s)	19
Bsc4I	CCNNNNNNNGG	9 cut(s)	416, 504, 799, 877, 1193, 1545, 1761, 1932, 2044
Bse118I	RCCGGY	4 cut(s)	299, 522, 1573, 1963
Bse1I	ACTGG	5 cut(s)	56, 853, 908, 1198, 1755
Bse3DI	GCAATG	4 cut(s)	468, 672, 1325, 1514
BseBI	CCWGG	5 cut(s)	238, 1168, 1376, 1940, 2039
BseDI	CCNNGG	8 cut(s)	498, 1166, 1539, 1565, 1938, 1939, 1986, 2038
BseGI	GGATG	5 cut(s)	1047, 1183, 1270, 1515, 2014
BseLI	CCNNNNNNNGG	9 cut(s)	416, 504, 799, 877, 1193, 1545, 1761, 1932, 2044
BseMI	GCAATG	4 cut(s)	468, 672, 1325, 1514
BseMII	CTCAG	5 cut(s)	569, 762, 984, 1731, 1896
BseNI	ACTGG	5 cut(s)	56, 853, 908, 1198, 1755
BseRI	GAGGAG	6 cut(s)	149, 160, 179, 479, 1757, 2003
BseSI	GKGCMC	1 cut(s)	1078
BseXI	GCAGC	7 cut(s)	37, 215, 485, 808, 901, 997, 1417
BseYI	CCCAGC	1 cut(s)	512
BsgI	GTGCAG	2 cut(s)	1023, 1416
Bsh1285I	CGRYCG	1 cut(s)	527
BshFI	GGCC	8 cut(s)	308, 357, 497, 522, 545, 1052, 1247, 1853
BshNI	GGYRCC	1 cut(s)	1570
BsiEI	CGRYCG	1 cut(s)	527
BsiHKAI	GWGCWC	2 cut(s)	189, 216
BsiHKCI	CYCGRG	2 cut(s)	280, 491
BslFI	GGGAC	3 cut(s)	257, 688, 1513
BslI	CCNNNNNNNGG	9 cut(s)	416, 504, 799, 877, 1193, 1545, 1761, 1932, 2044
BsmAI	GTCTC	4 cut(s)	447, 1617, 1789, 1835
BsmFI	GGGAC	3 cut(s)	257, 688, 1513
BsmI	GAATGC	1 cut(s)	1628
BsnI	GGCC	8 cut(s)	308, 357, 497, 522, 545, 1052, 1247, 1853
Bso31I	GGTCTC	1 cut(s)	1617
BsoBI	CYCGRG	2 cut(s)	280, 491
Bsp1286I	GDGCHC	3 cut(s)	189, 216, 1078
Bsp143I	GATC	9 cut(s)	422, 552, 936, 1109, 1140, 1148, 1354, 1945, 1996
Bsp19I	CCATGG	1 cut(s)	498
BspANI	GGCC	8 cut(s)	308, 357, 497, 522, 545, 1052, 1247, 1853
BspCNI	CTCAG	5 cut(s)	570, 763, 985, 1732, 1895
BspLI	GGNNCC	9 cut(s)	87, 245, 268, 325, 624, 1198, 1572, 1924, 1937
BspMAI	CTGCAG	1 cut(s)	1657
BspPI	GGATC	4 cut(s)	430, 1117, 1362, 1953
BspT107I	GGYRCC	1 cut(s)	1570
BspTI	CTTAAG	1 cut(s)	1079
BspTNI	GGTCTC	1 cut(s)	1617
BsrBI	CCGCTC	2 cut(s)	168, 672
BsrDI	GCAATG	4 cut(s)	468, 672, 1325, 1514
BsrFI	RCCGGY	4 cut(s)	299, 522, 1573, 1963
BsrI	ACTGG	5 cut(s)	56, 853, 908, 1198, 1755
BssAI	RCCGGY	4 cut(s)	299, 522, 1573, 1963
BssECI	CCNNGG	8 cut(s)	498, 1166, 1539, 1565, 1938, 1939, 1986, 2038
BssMI	GATC	9 cut(s)	422, 552, 936, 1109, 1140, 1148, 1354, 1945, 1996
BssNAI	GTATAC	1 cut(s)	1131
BssNI	GRCGYC	1 cut(s)	120
BssT1I	CCWWGG	2 cut(s)	498, 1539
Bst1107I	GTATAC	1 cut(s)	1131
Bst2UI	CCWGG	5 cut(s)	238, 1168, 1376, 1940, 2039
Bst4CI	ACNGT	1 cut(s)	943
Bst6I	CTCTTC	1 cut(s)	1604
BstACI	GRCGYC	1 cut(s)	120
BstAFI	CTTAAG	1 cut(s)	1079
BstAPI	GCANNNNNTGC	3 cut(s)	220, 1010, 1430
BstC8I	GCNNGC	6 cut(s)	212, 547, 1100, 1122, 1575, 1692
BstDEI	CTNAG	5 cut(s)	578, 771, 993, 1740, 1882
BstDSI	CCRYGG	2 cut(s)	498, 1565
BstEII	GGTNACC	1 cut(s)	1222
BstENI	CCTNNNNNAGG	2 cut(s)	875, 1930
BstF5I	GGATG	5 cut(s)	1047, 1183, 1270, 1515, 2014
BstH2I	RGCGCY	1 cut(s)	1819
BstHHI	GCGC	3 cut(s)	783, 1818, 2057
BstKTI	GATC	9 cut(s)	425, 555, 939, 1112, 1143, 1151, 1357, 1948, 1999
BstMAI	GTCTC	4 cut(s)	447, 1617, 1789, 1835
BstMBI	GATC	9 cut(s)	422, 552, 936, 1109, 1140, 1148, 1354, 1945, 1996
BstMCI	CGRYCG	1 cut(s)	527
BstNI	CCWGG	5 cut(s)	238, 1168, 1376, 1940, 2039
BstNSI	RCATGY	4 cut(s)	223, 1694, 1781, 1828
BstPI	GGTNACC	1 cut(s)	1222
BstSCI	CCNGG	7 cut(s)	81, 236, 476, 1166, 1374, 1938, 2037
BstSFI	CTRYAG	3 cut(s)	828, 1653, 1790
BstSLI	GKGCMC	1 cut(s)	1078
BstV1I	GCAGC	7 cut(s)	37, 215, 485, 808, 901, 997, 1417
BstX2I	RGATCY	4 cut(s)	422, 1109, 1148, 1354
BstYI	RGATCY	4 cut(s)	422, 1109, 1148, 1354
BstZ17I	GTATAC	1 cut(s)	1131
BsuRI	GGCC	8 cut(s)	308, 357, 497, 522, 545, 1052, 1247, 1853
BtgI	CCRYGG	2 cut(s)	498, 1565
BtsCI	GGATG	5 cut(s)	1047, 1183, 1270, 1515, 2014
BtsI	GCAGTG	1 cut(s)	1650
BtsIMutI	CAGTG	4 cut(s)	915, 939, 990, 1650
Cac8I	GCNNGC	6 cut(s)	212, 547, 1100, 1122, 1575, 1692
CaiI	CAGNNNCTG	2 cut(s)	1010, 1798
CfoI	GCGC	3 cut(s)	783, 1818, 2057
Cfr10I	RCCGGY	4 cut(s)	299, 522, 1573, 1963
Cfr13I	GGNCC	9 cut(s)	63, 244, 323, 376, 520, 622, 1050, 1935, 1980
CseI	GACGC	1 cut(s)	128
CsiI	ACCWGGT	2 cut(s)	236, 1374
Csp6I	GTAC	2 cut(s)	988, 1293
CviAII	CATG	8 cut(s)	220, 499, 550, 859, 1309, 1691, 1778, 1825
CviQI	GTAC	2 cut(s)	988, 1293
DdeI	CTNAG	5 cut(s)	578, 771, 993, 1740, 1882
DpnI	GATC	9 cut(s)	424, 554, 938, 1111, 1142, 1150, 1356, 1947, 1998
DpnII	GATC	9 cut(s)	422, 552, 936, 1109, 1140, 1148, 1354, 1945, 1996
DraIII	CACNNNGTG	1 cut(s)	240
EaeI	YGGCCR	1 cut(s)	543
Eam1104I	CTCTTC	1 cut(s)	1604
EarI	CTCTTC	1 cut(s)	1604
Ecl136II	GAGCTC	1 cut(s)	187
Eco130I	CCWWGG	2 cut(s)	498, 1539
Eco24I	GRGCYC	1 cut(s)	189
Eco31I	GGTCTC	1 cut(s)	1617
Eco47I	GGWCC	7 cut(s)	63, 244, 323, 376, 622, 1935, 1980
Eco47III	AGCGCT	1 cut(s)	1817
Eco53kI	GAGCTC	1 cut(s)	187
Eco88I	CYCGRG	2 cut(s)	280, 491
Eco91I	GGTNACC	1 cut(s)	1222
EcoICRI	GAGCTC	1 cut(s)	187
EcoNI	CCTNNNNNAGG	2 cut(s)	875, 1930
EcoO109I	RGGNCCY	2 cut(s)	244, 1935
EcoO65I	GGTNACC	1 cut(s)	1222
EcoRI	GAATTC	1 cut(s)	392
EcoRII	CCWGG	5 cut(s)	236, 1166, 1374, 1938, 2037
EcoT14I	CCWWGG	2 cut(s)	498, 1539
EcoT38I	GRGCYC	1 cut(s)	189
ErhI	CCWWGG	2 cut(s)	498, 1539
FaeI	CATG	8 cut(s)	223, 502, 553, 862, 1312, 1694, 1781, 1828
FalI	AAGNNNNNCTT	2 cut(s)	59, 91
FaqI	GGGAC	3 cut(s)	257, 688, 1513
FatI	CATG	8 cut(s)	219, 498, 549, 858, 1308, 1690, 1777, 1824
FauI	CCCGC	3 cut(s)	149, 334, 665
FauNDI	CATATG	2 cut(s)	1155, 1699
FbaI	TGATCA	2 cut(s)	552, 936
FblI	GTMKAC	2 cut(s)	1130, 1668
Fnu4HI	GCNGC	9 cut(s)	26, 229, 474, 510, 822, 825, 890, 1011, 1431
FokI	GGATG	5 cut(s)	1054, 1170, 1277, 1522, 2001
FriOI	GRGCYC	1 cut(s)	189
Fsp4HI	GCNGC	9 cut(s)	26, 229, 474, 510, 822, 825, 890, 1011, 1431
FspBI	CTAG	5 cut(s)	317, 717, 1125, 1257, 1559
GlaI	GCGC	3 cut(s)	782, 1817, 2056
GluI	GCNGC	9 cut(s)	26, 229, 474, 510, 822, 825, 890, 1011, 1431
GsaI	CCCAGC	1 cut(s)	516
GsuI	CTGGAG	2 cut(s)	1824, 2021
HaeII	RGCGCY	1 cut(s)	1819
HaeIII	GGCC	8 cut(s)	308, 357, 497, 522, 545, 1052, 1247, 1853
HgaI	GACGC	1 cut(s)	128
HhaI	GCGC	3 cut(s)	783, 1818, 2057
Hin1I	GRCGYC	1 cut(s)	120
Hin1II	CATG	8 cut(s)	223, 502, 553, 862, 1312, 1694, 1781, 1828
Hin6I	GCGC	3 cut(s)	781, 1816, 2055
HinP1I	GCGC	3 cut(s)	781, 1816, 2055
HincII	GTYRAC	1 cut(s)	1760
HindII	GTYRAC	1 cut(s)	1760
HindIII	AAGCTT	1 cut(s)	1096
HinfI	GANTC	4 cut(s)	5, 775, 931, 1730
HphI	GGTGA	6 cut(s)	226, 289, 1155, 1234, 1703, 1978
Hpy166II	GTNNAC	6 cut(s)	531, 990, 1131, 1295, 1669, 1760
Hpy188I	TCNGA	8 cut(s)	175, 441, 579, 684, 936, 1188, 1359, 1785
Hpy188III	TCNNGA	8 cut(s)	1262, 1633, 1734, 1841, 1920, 1929, 1978, 2000
Hpy8I	GTNNAC	6 cut(s)	531, 990, 1131, 1295, 1669, 1760
Hpy99I	CGWCG	6 cut(s)	275, 278, 404, 1918, 1963, 2034
HpyAV	CCTTC	6 cut(s)	190, 892, 1258, 1926, 1965, 2033
HpyCH4III	ACNGT	1 cut(s)	943
HpyF3I	CTNAG	5 cut(s)	578, 771, 993, 1740, 1882
Hsp92I	GRCGYC	1 cut(s)	120
Hsp92II	CATG	8 cut(s)	223, 502, 553, 862, 1312, 1694, 1781, 1828
HspAI	GCGC	3 cut(s)	781, 1816, 2055
KroI	GCCGGC	1 cut(s)	1573
KroNI	GCCGGC	1 cut(s)	1575
Ksp22I	TGATCA	2 cut(s)	552, 936
Kzo9I	GATC	9 cut(s)	422, 552, 936, 1109, 1140, 1148, 1354, 1945, 1996
LmnI	GCTCC	4 cut(s)	22, 173, 192, 272
Lsp1109I	GCAGC	7 cut(s)	37, 215, 485, 808, 901, 997, 1417
LweI	GCATC	3 cut(s)	681, 969, 997
MabI	ACCWGGT	2 cut(s)	236, 1374
MaeI	CTAG	5 cut(s)	317, 717, 1125, 1257, 1559
MaeIII	GTNAC	1 cut(s)	1222
MalI	GATC	9 cut(s)	424, 554, 938, 1111, 1142, 1150, 1356, 1947, 1998
MbiI	CCGCTC	2 cut(s)	168, 672
MboI	GATC	9 cut(s)	422, 552, 936, 1109, 1140, 1148, 1354, 1945, 1996
MboII	GAAGA	6 cut(s)	70, 428, 781, 1407, 1591, 2018
MfeI	CAATTG	3 cut(s)	627, 1239, 1425
MflI	RGATCY	4 cut(s)	422, 1109, 1148, 1354
MhlI	GDGCHC	3 cut(s)	189, 216, 1078
MlsI	TGGCCA	1 cut(s)	545
MluCI	AATT	9 cut(s)	392, 446, 627, 697, 1045, 1239, 1407, 1425, 1590
MluNI	TGGCCA	1 cut(s)	545
MlyI	GAGTC	1 cut(s)	940
MmeI	TCCRAC	4 cut(s)	198, 600, 1087, 1902
Mox20I	TGGCCA	1 cut(s)	545
MroNI	GCCGGC	1 cut(s)	1573
MscI	TGGCCA	1 cut(s)	545
MseI	TTAA	5 cut(s)	885, 1080, 1350, 1593, 1893
MslI	CAYNNNNRTG	2 cut(s)	1313, 1448
Msp20I	TGGCCA	1 cut(s)	545
MspA1I	CMGCKG	1 cut(s)	228
MspCI	CTTAAG	1 cut(s)	1079
MspR9I	CCNGG	7 cut(s)	83, 238, 478, 1168, 1376, 1940, 2039
MunI	CAATTG	3 cut(s)	627, 1239, 1425
Mva1269I	GAATGC	1 cut(s)	1628
MvaI	CCWGG	5 cut(s)	238, 1168, 1376, 1940, 2039
NaeI	GCCGGC	1 cut(s)	1575
NciI	CCSGG	2 cut(s)	83, 478
NcoI	CCATGG	1 cut(s)	498
NdeI	CATATG	2 cut(s)	1155, 1699
NdeII	GATC	9 cut(s)	422, 552, 936, 1109, 1140, 1148, 1354, 1945, 1996
NgoMIV	GCCGGC	1 cut(s)	1573
NlaIII	CATG	8 cut(s)	223, 502, 553, 862, 1312, 1694, 1781, 1828
NlaIV	GGNNCC	9 cut(s)	87, 245, 268, 325, 624, 1198, 1572, 1924, 1937
NmeAIII	GCCGAG	2 cut(s)	237, 341
NmuCI	GTSAC	1 cut(s)	1222
NspI	RCATGY	4 cut(s)	223, 1694, 1781, 1828
OliI	CACNNNNGTG	1 cut(s)	1448
PaeI	GCATGC	1 cut(s)	1694
PaeR7I	CTCGAG	1 cut(s)	491
PasI	CCCWGGG	1 cut(s)	1939
PcsI	WCGNNNNNNNCGW	2 cut(s)	270, 2026
PctI	GAATGC	1 cut(s)	1628
PdiI	GCCGGC	1 cut(s)	1575
PfeI	GAWTC	3 cut(s)	5, 775, 1730
PflFI	GACNNNGTC	1 cut(s)	1376
PflMI	CCANNNNNTGG	1 cut(s)	1545
PfoI	TCCNGGA	1 cut(s)	81
PkrI	GCNGC	9 cut(s)	27, 230, 475, 511, 823, 826, 891, 1012, 1432
PleI	GAGTC	1 cut(s)	939
PpsI	GAGTC	1 cut(s)	939
PpuMI	RGGWCCY	2 cut(s)	244, 1935
PshBI	ATTAAT	1 cut(s)	1593
PsiI	TTATAA	1 cut(s)	1406
Psp124BI	GAGCTC	1 cut(s)	189
Psp5II	RGGWCCY	2 cut(s)	244, 1935
Psp6I	CCWGG	5 cut(s)	236, 1166, 1374, 1938, 2037
PspEI	GGTNACC	1 cut(s)	1222
PspFI	CCCAGC	1 cut(s)	512
PspGI	CCWGG	5 cut(s)	236, 1166, 1374, 1938, 2037
PspN4I	GGNNCC	9 cut(s)	87, 245, 268, 325, 624, 1198, 1572, 1924, 1937
PspPI	GGNCC	9 cut(s)	63, 244, 323, 376, 520, 622, 1050, 1935, 1980
PspPPI	RGGWCCY	2 cut(s)	244, 1935
PspXI	VCTCGAGB	1 cut(s)	491
PstI	CTGCAG	1 cut(s)	1657
PstNI	CAGNNNCTG	2 cut(s)	1010, 1798
PsuI	RGATCY	4 cut(s)	422, 1109, 1148, 1354
PsyI	GACNNNGTC	1 cut(s)	1376
RsaI	GTAC	2 cut(s)	989, 1294
RsaNI	GTAC	2 cut(s)	988, 1293
RseI	CAYNNNNRTG	2 cut(s)	1313, 1448
SacI	GAGCTC	1 cut(s)	189
SaqAI	TTAA	5 cut(s)	885, 1080, 1350, 1593, 1893
SatI	GCNGC	9 cut(s)	26, 229, 474, 510, 822, 825, 890, 1011, 1431
Sau3AI	GATC	9 cut(s)	422, 552, 936, 1109, 1140, 1148, 1354, 1945, 1996
Sau96I	GGNCC	9 cut(s)	63, 244, 323, 376, 520, 622, 1050, 1935, 1980
SchI	GAGTC	1 cut(s)	940
ScrFI	CCNGG	7 cut(s)	83, 238, 478, 1168, 1376, 1940, 2039
SduI	GDGCHC	3 cut(s)	189, 216, 1078
SexAI	ACCWGGT	2 cut(s)	236, 1374
SfaNI	GCATC	3 cut(s)	681, 969, 997
SfcI	CTRYAG	3 cut(s)	828, 1653, 1790
Sfr274I	CTCGAG	1 cut(s)	491
SgrAI	CRCCGGYG	2 cut(s)	299, 1963
SinI	GGWCC	7 cut(s)	63, 244, 323, 376, 622, 1935, 1980
SlaI	CTCGAG	1 cut(s)	491
SmiMI	CAYNNNNRTG	2 cut(s)	1313, 1448
SmlI	CTYRAG	4 cut(s)	103, 491, 1079, 1633
SmoI	CTYRAG	4 cut(s)	103, 491, 1079, 1633
SpeI	ACTAGT	2 cut(s)	1256, 1558
SphI	GCATGC	1 cut(s)	1694
Sse9I	AATT	9 cut(s)	392, 446, 627, 697, 1045, 1239, 1407, 1425, 1590
SspMI	CTAG	5 cut(s)	317, 717, 1125, 1257, 1559
SstI	GAGCTC	1 cut(s)	189
StyD4I	CCNGG	7 cut(s)	81, 236, 476, 1166, 1374, 1938, 2037
StyI	CCWWGG	2 cut(s)	498, 1539
TaaI	ACNGT	1 cut(s)	943
TaqI	TCGA	9 cut(s)	183, 402, 492, 689, 896, 1274, 1930, 1995, 2001
TaqII	GACCGA	1 cut(s)	364
TasI	AATT	9 cut(s)	392, 446, 627, 697, 1045, 1239, 1407, 1425, 1590
TatI	WGTACW	2 cut(s)	987, 1292
TauI	GCSGC	2 cut(s)	512, 827
TfiI	GAWTC	3 cut(s)	5, 775, 1730
Tru1I	TTAA	5 cut(s)	885, 1080, 1350, 1593, 1893
Tru9I	TTAA	5 cut(s)	885, 1080, 1350, 1593, 1893
TscAI	CASTG	4 cut(s)	915, 946, 997, 1657
TseFI	GTSAC	1 cut(s)	1222
TseI	GCWGC	7 cut(s)	25, 228, 473, 821, 889, 1010, 1430
Tsp45I	GTSAC	1 cut(s)	1222
TspDTI	ATGAA	4 cut(s)	457, 1058, 1172, 1297
TspGWI	ACGGA	2 cut(s)	259, 1554
TspRI	CASTG	4 cut(s)	915, 946, 997, 1657
Tth111I	GACNNNGTC	1 cut(s)	1376
Van91I	CCANNNNNTGG	1 cut(s)	1545
Vha464I	CTTAAG	1 cut(s)	1079
VpaK11BI	GGWCC	7 cut(s)	63, 244, 323, 376, 622, 1935, 1980
VspI	ATTAAT	1 cut(s)	1593
XagI	CCTNNNNNAGG	2 cut(s)	875, 1930
XapI	RAATTY	1 cut(s)	392
XceI	RCATGY	4 cut(s)	223, 1694, 1781, 1828
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1563
XhoI	CTCGAG	1 cut(s)	491
XmiI	GTMKAC	2 cut(s)	1130, 1668
XspI	CTAG	5 cut(s)	317, 717, 1125, 1257, 1559

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.