Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0006530

Physical Location & Seq

Genomic Coordinates Reverse (-)

23155447 .. 23157151

Gene Structure 1705 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G017970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGGATCAAGAAACAGAGCAAAGAAGCTATTGGAGAAGATGGAGTAAGCAAGACTTCTTCCCGGAACCTACGTTCCAAAACTTCACTTCCTACAAAGAAGCCCTCTTCGACACTCCCTCCCGCCTCAAGGACCGCCTCATCAACCGCTCCACCGACTCCTTCGAGCTCCTGCAACTCCCCAAGCAAAGCGAAAACACAATGAAGCGTTGCCTTACGTGGTGGGACTTGGTCTGGCTCAGCTTCGGCTCCGTCGTCGGCTCCGGCATTTTTGTCATCACAGGCGAGGCCACTCTCCAAGCTGGACCCGCCATTGTATTGTCCTATGCAATCTCCGGCCTCTCCGCATTGCTATCTGTGATGTGTTACACCGAGTTCGCAGTTGAGATTCCGGTTGCAGGCGGGTCTTTTTCTTATCTCCGGATCGAACTAGGAGATTTCGTGGCGTTTATTGCGGCAGGGAACATTCTCTTGGAGGCTGTTGTTGGTGCAGCCGGACTAGGCCGGTCTTGGTCTTCTTACTTCGCCAGCATTATCAGTTCTAACACCAATTTGCTGCGATTTTCGGTACAATCTTTACCTGATGGTTTCAATCTTTTGGACCCTATTGCTGTTCTGGTGATTCTAGTTGCTAATGGTATAGCAATGAGTGGGACAAGTAGGACTTCTATTTTAAATTGGGTTACTTCTATTGCTAGTGCTGTTGTCATTGTGTTTATCATAGCAGTTGGGTTTTCTCATGGCAAAACTTCAAACTTGGAGCCTTTTTTCCCATATGGCGCAGAGGGTGTCTTCAAGGCTTCAGCTCTGGTTTATTGGTCTTACACTGGGTTTGATCTGGTTGCAACAATGGCCGAGGAAGTAAAGCGGCCCTCGAAGGATATACCAGTAGGTTTGATCGGTTCTATGAGCCTGATCACTATAATATATTGCTTGATGTCTTTGGGTTTGGTTATGATGCAGAAGTACACACAAATTAGTGCAGATGTTGCCTATTCGGCCGCTTTTCAAGCTGTTGGTATGAACTGGGCCAAGTACTTGGTGAGTATATGTGCTCTCAAGGGAATGACTACAAGCTTGCTGGTTTGCTCTCTTGGGCAAGGAAGGTATACCACTCAGATTGCAAGAGCTCATATGATTCCTCCCTGGTTCGCTTTGGTCCACCCAAAAACTGGAACCCCAATCTATGCTACTATTTTGGTGACCATAACTAGTGCTGTTGTAGCACTGTTTTCTAGTCTTGATATCCTGTCGAGTGTCTTCTCTTTCAGCACACTTGCTATATTTACTTTCGTGGCTATTGCATTGCTGGTGAGGCGCTATTATTTTCTTACAAGTTTGTTTGTTATAGTTGGTTCTTCAATCGGAATTGCAGCGCTTTGGAATTCAAATGTGCGAGGGTGGATTTGGTATGTAGTGGCCGCTTCAATTTGGTTACTTGGGACTCTGTGGATGGCATTGCTTCCGAAGCAAAGACTTGCCAAGGTTTGGGGTGTTCCACTAGTTCCATGGTTGCCTGCATTGTCAATTGGTATTAATGTTTTCCTCATTGGGTCTCTAGGCTACCTTGCATTCTTGAGGTTCGCCATTTGCACCGCGGTAATGGTTGTCTACTATTTGTTGGTTGGTGTACATGCGACATATGATGTTGCTCACCAGATTGACCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0016020 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

555

Amino Acids

60.84

Weight (kDa)

8.58

Isoelectric Point (pI)

35.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	71 - 439	1.6e-46	Amino acid permease
AA_permease	PF00324	76 - 440	2.7e-25	Amino acid permease
AA_permease_C	PF13906	496 - 545	8.3e-16	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17120
fragaria_vesca	FvH4_3g16770
malus_domestica	MD05G1206900.v1.1
prunus_persica	Prupe.4G150300_v2.0.a1
pyrus_communis	pycom05g19300 pycom10g16780
rosa_chinensis	RchiOBHm_Chr5g0028011 RchiOBHm_Chr5g0028021
rosa_laevigata	RLG00000033057 RLG00000033058
rosa_multiflora	Rmu_sc0009432.1_g000015 Rmu_sc0009432.1_g000016 Rmu_sc0009432.1_g000017 Rmu_sc0009561.1_g000001
rosa_roxburghii	Rroxscaffold_1G00051640 Rroxscaffold_1G00051650
rosa_rugosa	Rorug05G0103300 Rorug05G0103500
rosa_samantha	Rh5AG197100 Rh5BG195200 Rh5BG195300 Rh5CG215300 Rh5DG196800 Rh5DG196900
rosa_wichuraiana	Rw5G017960 Rw5G017970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	1169, 1485
AccBSI	CCGCTC	1 cut(s)	147
AccI	GTMKAC	2 cut(s)	1106, 1608
AccII	CGCG	1 cut(s)	1595
AccIII	TCCGGA	1 cut(s)	417
AclWI	GGATC	2 cut(s)	12, 428
AcoI	YGGCCR	3 cut(s)	849, 996, 1416
AcsI	RAATTY	1 cut(s)	1381
AcuI	CTGAAG	1 cut(s)	783
AfaI	GTAC	4 cut(s)	567, 965, 1034, 1629
AfeI	AGCGCT	1 cut(s)	1374
AfiI	CCNNNNNNNGG	4 cut(s)	127, 395, 1169, 1485
AgsI	TTSAA	7 cut(s)	589, 750, 793, 1007, 1359, 1386, 1425
AhlI	ACTAGT	2 cut(s)	1208, 1498
AjnI	CCWGG	1 cut(s)	1142
AjuI	GAANNNNNNNTTGG	2 cut(s)	452, 484
AloI	GAACNNNNNNTCC	4 cut(s)	56, 57, 88, 89
AluBI	AGCT	8 cut(s)	27, 166, 240, 299, 803, 1010, 1074, 1127
AluI	AGCT	8 cut(s)	27, 166, 240, 299, 803, 1010, 1074, 1127
Alw21I	GWGCWC	3 cut(s)	168, 1054, 1129
Alw26I	GTCTC	1 cut(s)	1557
AlwI	GGATC	2 cut(s)	12, 428
Aor13HI	TCCGGA	1 cut(s)	417
Aor51HI	AGCGCT	1 cut(s)	1374
AoxI	GGCC	8 cut(s)	285, 334, 499, 849, 866, 996, 1026, 1416
ApeKI	GCWGC	3 cut(s)	488, 553, 1370
ApoI	RAATTY	1 cut(s)	1381
AseI	ATTAAT	1 cut(s)	1533
AspLEI	GCGC	3 cut(s)	779, 1317, 1375
AspS9I	GGNCC	6 cut(s)	130, 302, 598, 867, 1026, 1156
AsuC2I	CCSGG	1 cut(s)	62
AsuHPI	GGTGA	5 cut(s)	628, 1051, 1210, 1321, 1643
AvaII	GGWCC	4 cut(s)	130, 302, 598, 1156
BanII	GRGCYC	2 cut(s)	168, 1129
BbsI	GAAGAC	3 cut(s)	504, 781, 1249
Bbv12I	GWGCWC	3 cut(s)	168, 1054, 1129
BbvI	GCAGC	3 cut(s)	500, 540, 1382
BccI	CCATC	3 cut(s)	33, 575, 1444
BciT130I	CCWGG	1 cut(s)	1144
BclI	TGATCA	1 cut(s)	912
BcnI	CCSGG	1 cut(s)	62
BcoDI	GTCTC	1 cut(s)	1557
BcuI	ACTAGT	2 cut(s)	1208, 1498
BfaI	CTAG	8 cut(s)	428, 497, 623, 693, 1209, 1233, 1499, 1556
BfoI	RGCGCY	2 cut(s)	1318, 1376
BglI	GCCNNNNNGGC	1 cut(s)	995
BisI	GCNGC	7 cut(s)	453, 489, 554, 866, 999, 1371, 1419
BlpI	GCTNAGC	1 cut(s)	236
BlsI	GCNGC	7 cut(s)	454, 490, 555, 867, 1000, 1372, 1420
BmcAI	AGTACT	1 cut(s)	1034
Bme1390I	CCNGG	2 cut(s)	62, 1144
Bme18I	GGWCC	4 cut(s)	130, 302, 598, 1156
BmgT120I	GGNCC	6 cut(s)	130, 302, 598, 867, 1026, 1156
BmiI	GGNNCC	7 cut(s)	66, 247, 259, 304, 600, 759, 1174
BmrFI	CCNGG	2 cut(s)	62, 1144
BmrI	ACTGGG	2 cut(s)	834, 1033
BmsI	GCATC	1 cut(s)	945
BmuI	ACTGGG	2 cut(s)	834, 1033
BpiI	GAAGAC	3 cut(s)	504, 781, 1249
Bpu1102I	GCTNAGC	1 cut(s)	236
BpuEI	CTTGAG	3 cut(s)	110, 1040, 1594
BpuMI	CCSGG	1 cut(s)	62
BsaAI	YACGTR	1 cut(s)	216
BsaI	GGTCTC	1 cut(s)	1557
BsaJI	CCNNGG	5 cut(s)	852, 1142, 1479, 1505, 1593
BsaWI	WCCGGW	2 cut(s)	388, 417
BsaXI	ACNNNNNCTCC	4 cut(s)	101, 131, 423, 453
Bsc4I	CCNNNNNNNGG	4 cut(s)	127, 395, 1169, 1485
Bse118I	RCCGGY	1 cut(s)	501
Bse1I	ACTGG	4 cut(s)	829, 884, 1028, 1174
Bse3DI	GCAATG	4 cut(s)	344, 648, 1301, 1454
BseAI	TCCGGA	1 cut(s)	417
BseBI	CCWGG	1 cut(s)	1144
BseDI	CCNNGG	5 cut(s)	852, 1142, 1479, 1505, 1593
BseGI	GGATG	1 cut(s)	1455
BseLI	CCNNNNNNNGG	4 cut(s)	127, 395, 1169, 1485
BseMI	GCAATG	4 cut(s)	344, 648, 1301, 1454
BseMII	CTCAG	2 cut(s)	250, 1127
BseNI	ACTGG	4 cut(s)	829, 884, 1028, 1174
BseX3I	CGGCCG	1 cut(s)	996
BseXI	GCAGC	3 cut(s)	500, 540, 1382
BsgI	GTGCAG	2 cut(s)	507, 999
Bsh1236I	CGCG	1 cut(s)	1595
Bsh1285I	CGRYCG	1 cut(s)	999
BshFI	GGCC	8 cut(s)	287, 336, 501, 851, 868, 998, 1028, 1418
BsiEI	CGRYCG	1 cut(s)	999
BsiHKAI	GWGCWC	3 cut(s)	168, 1054, 1129
BsiSI	CCGG	7 cut(s)	62, 261, 333, 389, 418, 492, 502
BslFI	GGGAC	3 cut(s)	236, 664, 1453
BslI	CCNNNNNNNGG	4 cut(s)	127, 395, 1169, 1485
BsmAI	GTCTC	1 cut(s)	1557
BsmFI	GGGAC	3 cut(s)	236, 664, 1453
BsmI	GAATGC	1 cut(s)	1568
BsnI	GGCC	8 cut(s)	287, 336, 501, 851, 868, 998, 1028, 1418
Bso31I	GGTCTC	1 cut(s)	1557
Bsp1286I	GDGCHC	3 cut(s)	168, 1054, 1129
Bsp13I	TCCGGA	1 cut(s)	417
Bsp1407I	TGTACA	1 cut(s)	1627
Bsp143I	GATC	5 cut(s)	4, 420, 832, 894, 912
Bsp1720I	GCTNAGC	1 cut(s)	236
Bsp19I	CCATGG	1 cut(s)	1505
BspANI	GGCC	8 cut(s)	287, 336, 501, 851, 868, 998, 1028, 1418
BspCNI	CTCAG	2 cut(s)	249, 1126
BspEI	TCCGGA	1 cut(s)	417
BspFNI	CGCG	1 cut(s)	1595
BspLI	GGNNCC	7 cut(s)	66, 247, 259, 304, 600, 759, 1174
BspPI	GGATC	2 cut(s)	12, 428
BspTNI	GGTCTC	1 cut(s)	1557
BsrBI	CCGCTC	1 cut(s)	147
BsrDI	GCAATG	4 cut(s)	344, 648, 1301, 1454
BsrFI	RCCGGY	1 cut(s)	501
BsrGI	TGTACA	1 cut(s)	1627
BsrI	ACTGG	4 cut(s)	829, 884, 1028, 1174
BssAI	RCCGGY	1 cut(s)	501
BssECI	CCNNGG	5 cut(s)	852, 1142, 1479, 1505, 1593
BssMI	GATC	5 cut(s)	4, 420, 832, 894, 912
BssNAI	GTATAC	1 cut(s)	1107
BssT1I	CCWWGG	2 cut(s)	1479, 1505
Bst1107I	GTATAC	1 cut(s)	1107
Bst2UI	CCWGG	1 cut(s)	1144
Bst4CI	ACNGT	1 cut(s)	1227
Bst6I	CTCTTC	1 cut(s)	110
BstAPI	GCANNNNNTGC	1 cut(s)	986
BstAUI	TGTACA	1 cut(s)	1627
BstBAI	YACGTR	1 cut(s)	216
BstC8I	GCNNGC	4 cut(s)	397, 526, 1076, 1515
BstDEI	CTNAG	2 cut(s)	236, 1113
BstDSI	CCRYGG	2 cut(s)	1505, 1593
BstEII	GGTNACC	1 cut(s)	1198
BstF5I	GGATG	1 cut(s)	1455
BstFNI	CGCG	1 cut(s)	1595
BstH2I	RGCGCY	2 cut(s)	1318, 1376
BstHHI	GCGC	3 cut(s)	779, 1317, 1375
BstKTI	GATC	5 cut(s)	7, 423, 835, 897, 915
BstMAI	GTCTC	1 cut(s)	1557
BstMBI	GATC	5 cut(s)	4, 420, 832, 894, 912
BstMCI	CGRYCG	1 cut(s)	999
BstMWI	GCNNNNNNNGC	9 cut(s)	305, 449, 848, 986, 995, 1007, 1220, 1312, 1465
BstNI	CCWGG	1 cut(s)	1144
BstNSI	RCATGY	1 cut(s)	1634
BstPI	GGTNACC	1 cut(s)	1198
BstSCI	CCNGG	2 cut(s)	60, 1142
BstUI	CGCG	1 cut(s)	1595
BstV1I	GCAGC	3 cut(s)	500, 540, 1382
BstV2I	GAAGAC	3 cut(s)	504, 781, 1249
BstXI	CCANNNNNNTGG	1 cut(s)	1036
BstZ17I	GTATAC	1 cut(s)	1107
BstZI	CGGCCG	1 cut(s)	996
BsuRI	GGCC	8 cut(s)	287, 336, 501, 851, 868, 998, 1028, 1418
BtgI	CCRYGG	2 cut(s)	1505, 1593
BtsCI	GGATG	1 cut(s)	1455
BtsIMutI	CAGTG	2 cut(s)	822, 1223
Cac8I	GCNNGC	4 cut(s)	397, 526, 1076, 1515
CfoI	GCGC	3 cut(s)	779, 1317, 1375
Cfr10I	RCCGGY	1 cut(s)	501
Cfr13I	GGNCC	6 cut(s)	130, 302, 598, 867, 1026, 1156
Cfr42I	CCGCGG	1 cut(s)	1596
Csp6I	GTAC	4 cut(s)	566, 964, 1033, 1628
CspCI	CAANNNNNGTGG	2 cut(s)	1099, 1134
CviAII	CATG	3 cut(s)	737, 1506, 1631
CviQI	GTAC	4 cut(s)	566, 964, 1033, 1628
DdeI	CTNAG	2 cut(s)	236, 1113
DpnI	GATC	5 cut(s)	6, 422, 834, 896, 914
DpnII	GATC	5 cut(s)	4, 420, 832, 894, 912
DraI	TTTAAA	1 cut(s)	672
EaeI	YGGCCR	3 cut(s)	849, 996, 1416
EagI	CGGCCG	1 cut(s)	996
Eam1104I	CTCTTC	1 cut(s)	110
EarI	CTCTTC	1 cut(s)	110
Ecl136II	GAGCTC	2 cut(s)	166, 1127
EclXI	CGGCCG	1 cut(s)	996
Eco130I	CCWWGG	2 cut(s)	1479, 1505
Eco24I	GRGCYC	2 cut(s)	168, 1129
Eco31I	GGTCTC	1 cut(s)	1557
Eco32I	GATATC	1 cut(s)	1243
Eco47I	GGWCC	4 cut(s)	130, 302, 598, 1156
Eco47III	AGCGCT	1 cut(s)	1374
Eco52I	CGGCCG	1 cut(s)	996
Eco53kI	GAGCTC	2 cut(s)	166, 1127
Eco57I	CTGAAG	1 cut(s)	783
Eco91I	GGTNACC	1 cut(s)	1198
EcoICRI	GAGCTC	2 cut(s)	166, 1127
EcoO65I	GGTNACC	1 cut(s)	1198
EcoRI	GAATTC	1 cut(s)	1381
EcoRII	CCWGG	1 cut(s)	1142
EcoRV	GATATC	1 cut(s)	1243
EcoT14I	CCWWGG	2 cut(s)	1479, 1505
EcoT38I	GRGCYC	2 cut(s)	168, 1129
ErhI	CCWWGG	2 cut(s)	1479, 1505
FaeI	CATG	3 cut(s)	740, 1509, 1634
FalI	AAGNNNNNCTT	4 cut(s)	38, 70, 646, 678
FaqI	GGGAC	3 cut(s)	236, 664, 1453
FatI	CATG	3 cut(s)	736, 1505, 1630
FauI	CCCGC	3 cut(s)	128, 313, 392
FauNDI	CATATG	3 cut(s)	772, 1131, 1639
FbaI	TGATCA	1 cut(s)	912
FblI	GTMKAC	2 cut(s)	1106, 1608
Fnu4HI	GCNGC	7 cut(s)	453, 489, 554, 866, 999, 1371, 1419
FokI	GGATG	1 cut(s)	1462
FriOI	GRGCYC	2 cut(s)	168, 1129
Fsp4HI	GCNGC	7 cut(s)	453, 489, 554, 866, 999, 1371, 1419
FspBI	CTAG	8 cut(s)	428, 497, 623, 693, 1209, 1233, 1499, 1556
GlaI	GCGC	3 cut(s)	778, 1316, 1374
GluI	GCNGC	7 cut(s)	453, 489, 554, 866, 999, 1371, 1419
HaeII	RGCGCY	2 cut(s)	1318, 1376
HaeIII	GGCC	8 cut(s)	287, 336, 501, 851, 868, 998, 1028, 1418
HapII	CCGG	7 cut(s)	62, 261, 333, 389, 418, 492, 502
HhaI	GCGC	3 cut(s)	779, 1317, 1375
Hin1II	CATG	3 cut(s)	740, 1509, 1634
Hin6I	GCGC	3 cut(s)	777, 1315, 1373
HinP1I	GCGC	3 cut(s)	777, 1315, 1373
HindIII	AAGCTT	1 cut(s)	1072
HinfI	GANTC	5 cut(s)	155, 385, 619, 1135, 1441
HpaII	CCGG	7 cut(s)	62, 261, 333, 389, 418, 492, 502
HphI	GGTGA	5 cut(s)	628, 1051, 1210, 1321, 1643
Hpy166II	GTNNAC	5 cut(s)	966, 1107, 1159, 1609, 1628
Hpy188I	TCNGA	3 cut(s)	1116, 1364, 1464
Hpy188III	TCNNGA	4 cut(s)	8, 418, 1238, 1573
Hpy8I	GTNNAC	5 cut(s)	966, 1107, 1159, 1609, 1628
Hpy99I	CGWCG	2 cut(s)	254, 257
HpyAV	CCTTC	3 cut(s)	169, 868, 1095
HpyCH4III	ACNGT	1 cut(s)	1227
HpyCH4IV	ACGT	2 cut(s)	71, 215
HpyF10VI	GCNNNNNNNGC	9 cut(s)	305, 449, 848, 986, 995, 1007, 1220, 1312, 1465
HpyF3I	CTNAG	2 cut(s)	236, 1113
HpySE526I	ACGT	2 cut(s)	71, 215
Hsp92II	CATG	3 cut(s)	740, 1509, 1634
HspAI	GCGC	3 cut(s)	777, 1315, 1373
Kpn2I	TCCGGA	1 cut(s)	417
Ksp22I	TGATCA	1 cut(s)	912
KspI	CCGCGG	1 cut(s)	1596
Kzo9I	GATC	5 cut(s)	4, 420, 832, 894, 912
LmnI	GCTCC	5 cut(s)	152, 171, 251, 263, 757
Lsp1109I	GCAGC	3 cut(s)	500, 540, 1382
LweI	GCATC	1 cut(s)	945
MaeI	CTAG	8 cut(s)	428, 497, 623, 693, 1209, 1233, 1499, 1556
MaeII	ACGT	2 cut(s)	71, 215
MaeIII	GTNAC	4 cut(s)	362, 679, 1198, 1431
MalI	GATC	5 cut(s)	6, 422, 834, 896, 914
MbiI	CCGCTC	1 cut(s)	147
MboI	GATC	5 cut(s)	4, 420, 832, 894, 912
MboII	GAAGA	7 cut(s)	48, 49, 97, 504, 781, 1249, 1347
MfeI	CAATTG	1 cut(s)	1524
MhlI	GDGCHC	3 cut(s)	168, 1054, 1129
MluCI	AATT	7 cut(s)	547, 673, 972, 1365, 1381, 1425, 1524
MlyI	GAGTC	2 cut(s)	149, 1435
MroI	TCCGGA	1 cut(s)	417
MseI	TTAA	2 cut(s)	671, 1533
MspA1I	CMGCKG	1 cut(s)	1595
MspI	CCGG	7 cut(s)	62, 261, 333, 389, 418, 492, 502
MspR9I	CCNGG	2 cut(s)	62, 1144
MunI	CAATTG	1 cut(s)	1524
Mva1269I	GAATGC	1 cut(s)	1568
MvaI	CCWGG	1 cut(s)	1144
MvnI	CGCG	1 cut(s)	1595
MwoI	GCNNNNNNNGC	9 cut(s)	305, 449, 848, 986, 995, 1007, 1220, 1312, 1465
NciI	CCSGG	1 cut(s)	62
NcoI	CCATGG	1 cut(s)	1505
NdeI	CATATG	3 cut(s)	772, 1131, 1639
NdeII	GATC	5 cut(s)	4, 420, 832, 894, 912
NlaIII	CATG	3 cut(s)	740, 1509, 1634
NlaIV	GGNNCC	7 cut(s)	66, 247, 259, 304, 600, 759, 1174
NmeAIII	GCCGAG	1 cut(s)	877
NmuCI	GTSAC	1 cut(s)	1198
NspI	RCATGY	1 cut(s)	1634
PcsI	WCGNNNNNNNCGW	1 cut(s)	249
PctI	GAATGC	1 cut(s)	1568
PfeI	GAWTC	3 cut(s)	385, 619, 1135
PflFI	GACNNNGTC	1 cut(s)	227
PflMI	CCANNNNNTGG	2 cut(s)	1169, 1485
PfoI	TCCNGGA	1 cut(s)	60
PkrI	GCNGC	7 cut(s)	454, 490, 555, 867, 1000, 1372, 1420
PleI	GAGTC	2 cut(s)	149, 1435
PpsI	GAGTC	2 cut(s)	149, 1435
Ppu21I	YACGTR	1 cut(s)	216
PshBI	ATTAAT	1 cut(s)	1533
Psp124BI	GAGCTC	2 cut(s)	168, 1129
Psp6I	CCWGG	1 cut(s)	1142
PspEI	GGTNACC	1 cut(s)	1198
PspGI	CCWGG	1 cut(s)	1142
PspN4I	GGNNCC	7 cut(s)	66, 247, 259, 304, 600, 759, 1174
PspPI	GGNCC	6 cut(s)	130, 302, 598, 867, 1026, 1156
PsyI	GACNNNGTC	1 cut(s)	227
RsaI	GTAC	4 cut(s)	567, 965, 1034, 1629
RsaNI	GTAC	4 cut(s)	566, 964, 1033, 1628
SacI	GAGCTC	2 cut(s)	168, 1129
SacII	CCGCGG	1 cut(s)	1596
SaqAI	TTAA	2 cut(s)	671, 1533
SatI	GCNGC	7 cut(s)	453, 489, 554, 866, 999, 1371, 1419
Sau3AI	GATC	5 cut(s)	4, 420, 832, 894, 912
Sau96I	GGNCC	6 cut(s)	130, 302, 598, 867, 1026, 1156
ScaI	AGTACT	1 cut(s)	1034
SchI	GAGTC	2 cut(s)	149, 1435
ScrFI	CCNGG	2 cut(s)	62, 1144
SduI	GDGCHC	3 cut(s)	168, 1054, 1129
SfaNI	GCATC	1 cut(s)	945
Sfr303I	CCGCGG	1 cut(s)	1596
SgrBI	CCGCGG	1 cut(s)	1596
SinI	GGWCC	4 cut(s)	130, 302, 598, 1156
SmlI	CTYRAG	3 cut(s)	125, 1055, 1573
SmoI	CTYRAG	3 cut(s)	125, 1055, 1573
SpeI	ACTAGT	2 cut(s)	1208, 1498
Sse9I	AATT	7 cut(s)	547, 673, 972, 1365, 1381, 1425, 1524
SspMI	CTAG	8 cut(s)	428, 497, 623, 693, 1209, 1233, 1499, 1556
SstI	GAGCTC	2 cut(s)	168, 1129
StyD4I	CCNGG	2 cut(s)	60, 1142
StyI	CCWWGG	2 cut(s)	1479, 1505
TaaI	ACNGT	1 cut(s)	1227
TaiI	ACGT	2 cut(s)	74, 218
TaqI	TCGA	5 cut(s)	108, 162, 423, 872, 1250
TasI	AATT	7 cut(s)	547, 673, 972, 1365, 1381, 1425, 1524
TatI	WGTACW	3 cut(s)	963, 1032, 1627
TauI	GCSGC	4 cut(s)	455, 868, 1001, 1421
TfiI	GAWTC	3 cut(s)	385, 619, 1135
Tru1I	TTAA	2 cut(s)	671, 1533
Tru9I	TTAA	2 cut(s)	671, 1533
TscAI	CASTG	2 cut(s)	829, 1230
TseFI	GTSAC	1 cut(s)	1198
TseI	GCWGC	3 cut(s)	488, 553, 1370
Tsp45I	GTSAC	1 cut(s)	1198
TspDTI	ATGAA	2 cut(s)	215, 1034
TspGWI	ACGGA	1 cut(s)	238
TspRI	CASTG	2 cut(s)	829, 1230
Tth111I	GACNNNGTC	1 cut(s)	227
Van91I	CCANNNNNTGG	2 cut(s)	1169, 1485
VpaK11BI	GGWCC	4 cut(s)	130, 302, 598, 1156
VspI	ATTAAT	1 cut(s)	1533
XapI	RAATTY	1 cut(s)	1381
XceI	RCATGY	1 cut(s)	1634
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1166, 1503
XmiI	GTMKAC	2 cut(s)	1106, 1608
XspI	CTAG	8 cut(s)	428, 497, 623, 693, 1209, 1233, 1499, 1556
ZrmI	AGTACT	1 cut(s)	1034

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.