Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0012459

Physical Location & Seq

Genomic Coordinates Reverse (-)

22773603 .. 22775306

Gene Structure 1704 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g19870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGCGGTTCTCGTAAATTCAGTGTCTCCAATTGCACACCCATCGTCAGAAACCACCAGAAAAACTTGTGGGTTCTTCTCCCACATCAGGAATCTTCAACCCCTTTCCCTTAGCAAGGGATTTTCCAGAGTTTTGGCGGCTTCCCAGATCACGATTTCTCCGAAAGACACTGTTTTCGCCTTGCCCAACTGGAGGCATGCCAAGAATGACAGAAGAAGTAAGGAGCTCAGACTCATTGATGCCTTTGTGCACTTTGAGTCTATGGTGGGGAAGGGCCAGAAGCCTGATGTGGCTCAGGCAACTCAGCTCTTGTATGACCTCTGCAAAGTGAATAAGATGCGAAAGGCAGTCAGAGTCATCGAAATGATGGTTCTTTCCGGCATTATACCTGATGCAGCTTCTTATACTTTCTTGGTGAATTACTTGTGTAAAAGAGGGAACATTGGGTATGCAATGCAGCTGGTAGAGAAGATGGAGGAATATGGATATCCGACAAATACTGTGACCTACAATTCGCTCGTCAGAGGGCTTTGCGTTCGCGGAAACTTGAATCAGAGCTTGCAGCTTTTGGATAGACTGATACAGAAGGGTCTGGTTCCGAATGTTTATACGTACTCTTTCTTACTTGAAGCTGCTTATAAGGAAAGAGGGGTCAATGAAGCCATGAAGCTCCTGCAGGAGATAATTGCTAAAGGTGGAAAGCCTAATGTGGTCAGTTACAATGTCTTGTTAACTGGTTTGTGCAAGGAAGGTAGGACTGACGAGGCATTTCGGCTCTTTAGGAGTTTGCCTTCGATGGGGTTCGATCCAAATGTTGTCAGCTATAACATCGTACTAAGGAGTTTGTGTCACGAGGGTAGGTGGGAAGAGGCAAATGTGCTTTTGTCTGAGATGGAAGGAGAGGATCGAGCCCCTTCCATAGTTACGTATAACATCTTAATTGGTTCACTTGCACTTCATGGTAGAACTGAACATGCTCTTCAAGTTTTGGACGAATTGCAAAGAGGTCGGTTCAAGCCTACCGCTGCCAGCTACAATCCGATCATTGCTCATCTCTGCAAAGAGGGGAAAGTGGATGGTGCGGTTAAGTGTCTAGACCAAATGGTTCATCGGCGGTGTAATCCTAATGAGGGAACATTCAATGCCATTGCTGTGCTCTGTGAGGAAGGTTTGGTGCCAGAGGCATTCTCTATCATTCAAAGCCTCTGCAATAAACAAAAGTGCTCCAGCTACGAGTTGTACAAAAACGTAATCACAAGCTTGTGTCGGAAAGGGAACACGTTTCCAGCATTTCAGTTATTGTACGAAATGACCAAGCACGGTTTCACTCCAGATTCTTATACTTATTCATCTCTGATCAGAGGATTGTGTATGGAGGGTATGCTGGATGAGGCCATGGAGATTTTCAAGGTGATGGAAGAAAACAGCCTTAGGCCTGATACGGACAATTTCAATGCTCTTATACTCGGTTTCTGCAAGTCTCGAAGAACAGACTTGTCCTTCCAGGTTTTTGAGATGATGATCGAGAAAGGGCGTATGCCTAGCGAAATGACCTACACCATTCTTGTGGAAGGGATTGCGCACGAAGGAGAACTGGAACTGGCAGCCAGAGTCTTAAAAGAGTTGCACATGAGACACGTAGTGAGTCCGAATACAGTGGAAAGACTGGTTATGCAGTACGACATTGAGGATTTACCGGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

568

Amino Acids

63.88

Weight (kDa)

7.84

Isoelectric Point (pI)

39.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	107 - 144	4.7e-07	PPR repeat family
PPR_long	PF17177	111 - 212	6.7e-07	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	127 - 159	7e-07	PPR repeat
PPR_2	PF13041	130 - 178	5.4e-12	PPR repeat family
TPR_24	PF23276	146 - 262	2.8e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	154 - 211	2.9e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	163 - 192	4.9e-06	PPR repeat
PPR_2	PF13041	166 - 211	4.2e-11	PPR repeat family
PPR_2	PF13041	208 - 249	4.1e-08	PPR repeat family
PPR_3	PF13812	223 - 280	1.2e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	231 - 261	5.8e-12	PPR repeat
PPR_2	PF13041	235 - 284	3.6e-17	PPR repeat family
PPR	PF01535	238 - 268	5.1e-07	PPR repeat
PPR_1	PF12854	266 - 299	7.3e-09	PPR repeat
PPR_2	PF13041	270 - 318	7.5e-14	PPR repeat family
PPR_3	PF13812	294 - 350	3.9e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	305 - 332	1e-05	PPR repeat
PPR_2	PF13041	305 - 346	1.5e-07	PPR repeat family
PPR_1	PF12854	338 - 369	1.1e-06	PPR repeat
PPR_2	PF13041	340 - 382	5.7e-11	PPR repeat family
PPR_2	PF13041	414 - 457	3.2e-12	PPR repeat family
PPR_3	PF13812	433 - 488	1.4e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	441 - 473	5.4e-12	PPR repeat
PPR	PF01535	447 - 475	4e-08	PPR repeat
PPR_2	PF13041	479 - 527	2.4e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012459)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79080
fragaria_vesca	FvH4_3g15990
malus_domestica	MD05G1216400.v1.1 MD10G1198700.v1.1
prunus_persica	Prupe.4G143000_v2.0.a1
pyrus_communis	pycom05g19870 pycom10g17140
rosa_chinensis	RchiOBHm_Chr5g0026921
rosa_laevigata	RLG00000032970
rosa_multiflora	Rmu_co8463079.1_g000001 Rmu_sc0004223.1_g000006 Rmu_sc0008732.1_g000003
rosa_roxburghii	Rroxscaffold_1G00052550
rosa_rugosa	Rorug05G0095900
rosa_samantha	Rh5AG189500 Rh5BG187100 Rh5CG206800 Rh5DG188800
rosa_wichuraiana	Rw5G017240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	639
Acc16I	TGCGCA	1 cut(s)	1581
AccB1I	GGYRCC	1 cut(s)	1174
AccII	CGCG	1 cut(s)	540
AciI	CCGC	6 cut(s)	5, 137, 540, 1023, 1082, 1114
AclWI	GGATC	2 cut(s)	800, 912
AcsI	RAATTY	1 cut(s)	16
AdeI	CACNNNGTG	1 cut(s)	1642
AfaI	GTAC	5 cut(s)	614, 834, 1241, 1304, 1679
AfiI	CCNNNNNNNGG	5 cut(s)	87, 115, 192, 797, 1130
AflIII	ACRYGT	2 cut(s)	1278, 1636
AgsI	TTSAA	9 cut(s)	98, 550, 629, 983, 1015, 1141, 1199, 1408, 1453
AjnI	CCWGG	1 cut(s)	1503
AjuI	GAANNNNNNNTTGG	2 cut(s)	1307, 1339
Alw21I	GWGCWC	4 cut(s)	228, 252, 1158, 1226
Alw26I	GTCTC	3 cut(s)	30, 1485, 1627
Alw44I	GTGCAC	1 cut(s)	248
AlwI	GGATC	2 cut(s)	800, 912
AoxI	GGCC	3 cut(s)	274, 1392, 1433
ApaLI	GTGCAC	1 cut(s)	248
ApeKI	GCWGC	6 cut(s)	395, 457, 562, 632, 1025, 1604
ApoI	RAATTY	1 cut(s)	16
ArsI	GACNNNNNNTTYG	4 cut(s)	158, 190, 496, 528
AspLEI	GCGC	1 cut(s)	1582
AspS9I	GGNCC	1 cut(s)	274
AsuC2I	CCSGG	1 cut(s)	1698
AsuHPI	GGTGA	2 cut(s)	427, 1423
AxyI	CCTNAGG	1 cut(s)	1430
BaeGI	GKGCMC	1 cut(s)	252
BanI	GGYRCC	1 cut(s)	1174
BanII	GRGCYC	2 cut(s)	228, 913
BauI	CACGAG	1 cut(s)	851
Bbv12I	GWGCWC	4 cut(s)	228, 252, 1158, 1226
BbvI	GCAGC	6 cut(s)	407, 469, 574, 619, 1012, 1616
BccI	CCATC	7 cut(s)	49, 361, 466, 790, 886, 1070, 1408
BcgI	CGANNNNNNTGC	4 cut(s)	24, 58, 989, 1023
BciT130I	CCWGG	1 cut(s)	1505
BclI	TGATCA	1 cut(s)	1356
BcnI	CCSGG	1 cut(s)	1698
BcoDI	GTCTC	3 cut(s)	30, 1485, 1627
BfaI	CTAG	2 cut(s)	1094, 1542
BfmI	CTRYAG	1 cut(s)	674
BisI	GCNGC	7 cut(s)	138, 396, 458, 563, 633, 1026, 1605
BlsI	GCNGC	7 cut(s)	139, 397, 459, 564, 634, 1027, 1606
Bme1390I	CCNGG	2 cut(s)	1505, 1698
BmgT120I	GGNCC	1 cut(s)	274
BmiI	GGNNCC	2 cut(s)	597, 1176
BmrFI	CCNGG	2 cut(s)	1505, 1698
BmsI	GCATC	3 cut(s)	229, 327, 382
BplI	GAGNNNNNCTC	2 cut(s)	1172, 1204
BpmI	CTGGAG	3 cut(s)	211, 1210, 1314
Bpu10I	CCTNAGC	2 cut(s)	110, 294
BpuMI	CCSGG	1 cut(s)	1698
BsaAI	YACGTR	3 cut(s)	612, 927, 1639
BsaBI	GATNNNNATC	1 cut(s)	1520
BsaJI	CCNNGG	1 cut(s)	1395
BsaXI	ACNNNNNCTCC	4 cut(s)	142, 172, 832, 862
Bsc4I	CCNNNNNNNGG	5 cut(s)	87, 115, 192, 797, 1130
Bse1I	ACTGG	5 cut(s)	194, 739, 1599, 1605, 1671
Bse21I	CCTNAGG	1 cut(s)	1430
Bse3DI	GCAATG	3 cut(s)	459, 1044, 1146
Bse8I	GATNNNNATC	1 cut(s)	1520
BseBI	CCWGG	1 cut(s)	1505
BseDI	CCNNGG	1 cut(s)	1395
BseGI	GGATG	2 cut(s)	1081, 1393
BseJI	GATNNNNATC	1 cut(s)	1520
BseLI	CCNNNNNNNGG	5 cut(s)	87, 115, 192, 797, 1130
BseMI	GCAATG	3 cut(s)	459, 1044, 1146
BseMII	CTCAG	4 cut(s)	241, 308, 317, 879
BseNI	ACTGG	5 cut(s)	194, 739, 1599, 1605, 1671
BseSI	GKGCMC	1 cut(s)	252
BseXI	GCAGC	6 cut(s)	407, 469, 574, 619, 1012, 1616
Bsh1236I	CGCG	1 cut(s)	540
BshFI	GGCC	3 cut(s)	276, 1394, 1435
BshNI	GGYRCC	1 cut(s)	1174
BsiHKAI	GWGCWC	4 cut(s)	228, 252, 1158, 1226
BsiSI	CCGG	2 cut(s)	378, 1697
BslI	CCNNNNNNNGG	5 cut(s)	87, 115, 192, 797, 1130
BsmAI	GTCTC	3 cut(s)	30, 1485, 1627
BsmI	GAATGC	1 cut(s)	1184
BsnI	GGCC	3 cut(s)	276, 1394, 1435
Bsp1286I	GDGCHC	5 cut(s)	228, 252, 913, 1158, 1226
Bsp1407I	TGTACA	1 cut(s)	1239
Bsp143I	GATC	6 cut(s)	147, 805, 904, 1041, 1356, 1521
Bsp19I	CCATGG	1 cut(s)	1395
BspACI	CCGC	6 cut(s)	5, 137, 540, 1023, 1082, 1114
BspANI	GGCC	3 cut(s)	276, 1394, 1435
BspCNI	CTCAG	4 cut(s)	240, 307, 316, 880
BspFNI	CGCG	1 cut(s)	540
BspLI	GGNNCC	2 cut(s)	597, 1176
BspMAI	CTGCAG	1 cut(s)	678
BspPI	GGATC	2 cut(s)	800, 912
BspQI	GCTCTTC	1 cut(s)	984
BspT107I	GGYRCC	1 cut(s)	1174
BsrDI	GCAATG	3 cut(s)	459, 1044, 1146
BsrGI	TGTACA	1 cut(s)	1239
BsrI	ACTGG	5 cut(s)	194, 739, 1599, 1605, 1671
BssECI	CCNNGG	1 cut(s)	1395
BssMI	GATC	6 cut(s)	147, 805, 904, 1041, 1356, 1521
BssSI	CACGAG	1 cut(s)	851
BssT1I	CCWWGG	1 cut(s)	1395
Bst2BI	CACGAG	1 cut(s)	851
Bst2UI	CCWGG	1 cut(s)	1505
Bst4CI	ACNGT	4 cut(s)	172, 502, 1322, 1657
Bst6I	CTCTTC	2 cut(s)	861, 984
BstAUI	TGTACA	1 cut(s)	1239
BstBAI	YACGTR	3 cut(s)	612, 927, 1639
BstC8I	GCNNGC	3 cut(s)	198, 560, 1030
BstDEI	CTNAG	7 cut(s)	110, 227, 294, 303, 836, 888, 1430
BstDSI	CCRYGG	1 cut(s)	1395
BstENI	CCTNNNNNAGG	1 cut(s)	113
BstF5I	GGATG	2 cut(s)	1081, 1393
BstFNI	CGCG	1 cut(s)	540
BstHHI	GCGC	1 cut(s)	1582
BstKTI	GATC	6 cut(s)	150, 808, 907, 1044, 1359, 1524
BstMAI	GTCTC	3 cut(s)	30, 1485, 1627
BstMBI	GATC	6 cut(s)	147, 805, 904, 1041, 1356, 1521
BstNI	CCWGG	1 cut(s)	1505
BstNSI	RCATGY	2 cut(s)	200, 977
BstSCI	CCNGG	2 cut(s)	1503, 1696
BstSFI	CTRYAG	1 cut(s)	674
BstSLI	GKGCMC	1 cut(s)	252
BstSNI	TACGTA	2 cut(s)	612, 927
BstUI	CGCG	1 cut(s)	540
BstV1I	GCAGC	6 cut(s)	407, 469, 574, 619, 1012, 1616
BstXI	CCANNNNNNTGG	2 cut(s)	133, 1567
Bsu36I	CCTNAGG	1 cut(s)	1430
BsuRI	GGCC	3 cut(s)	276, 1394, 1435
BtgI	CCRYGG	1 cut(s)	1395
BtsCI	GGATG	2 cut(s)	1081, 1393
BtsIMutI	CAGTG	3 cut(s)	27, 168, 1662
Cac8I	GCNNGC	3 cut(s)	198, 560, 1030
CfoI	GCGC	1 cut(s)	1582
Cfr13I	GGNCC	1 cut(s)	274
Csp6I	GTAC	5 cut(s)	613, 833, 1240, 1303, 1678
CviAII	CATG	6 cut(s)	197, 664, 959, 974, 1396, 1630
CviQI	GTAC	5 cut(s)	613, 833, 1240, 1303, 1678
DdeI	CTNAG	7 cut(s)	110, 227, 294, 303, 836, 888, 1430
DpnI	GATC	6 cut(s)	149, 807, 906, 1043, 1358, 1523
DpnII	GATC	6 cut(s)	147, 805, 904, 1041, 1356, 1521
DraIII	CACNNNGTG	1 cut(s)	1642
Eam1104I	CTCTTC	2 cut(s)	861, 984
EarI	CTCTTC	2 cut(s)	861, 984
Ecl136II	GAGCTC	1 cut(s)	226
Eco105I	TACGTA	2 cut(s)	612, 927
Eco130I	CCWWGG	1 cut(s)	1395
Eco147I	AGGCCT	1 cut(s)	1435
Eco24I	GRGCYC	2 cut(s)	228, 913
Eco32I	GATATC	1 cut(s)	488
Eco53kI	GAGCTC	1 cut(s)	226
Eco81I	CCTNAGG	1 cut(s)	1430
EcoICRI	GAGCTC	1 cut(s)	226
EcoNI	CCTNNNNNAGG	1 cut(s)	113
EcoRII	CCWGG	1 cut(s)	1503
EcoRV	GATATC	1 cut(s)	488
EcoT14I	CCWWGG	1 cut(s)	1395
EcoT38I	GRGCYC	2 cut(s)	228, 913
ErhI	CCWWGG	1 cut(s)	1395
FaeI	CATG	6 cut(s)	200, 667, 962, 977, 1399, 1633
FatI	CATG	6 cut(s)	196, 663, 958, 973, 1395, 1629
FbaI	TGATCA	1 cut(s)	1356
Fnu4HI	GCNGC	7 cut(s)	138, 396, 458, 563, 633, 1026, 1605
FokI	GGATG	2 cut(s)	1088, 1400
FriOI	GRGCYC	2 cut(s)	228, 913
Fsp4HI	GCNGC	7 cut(s)	138, 396, 458, 563, 633, 1026, 1605
FspBI	CTAG	2 cut(s)	1094, 1542
FspI	TGCGCA	1 cut(s)	1581
GlaI	GCGC	1 cut(s)	1581
GluI	GCNGC	7 cut(s)	138, 396, 458, 563, 633, 1026, 1605
GsuI	CTGGAG	3 cut(s)	211, 1210, 1314
HaeIII	GGCC	3 cut(s)	276, 1394, 1435
HapII	CCGG	2 cut(s)	378, 1697
HhaI	GCGC	1 cut(s)	1582
Hin1II	CATG	6 cut(s)	200, 667, 962, 977, 1399, 1633
Hin6I	GCGC	1 cut(s)	1580
HinP1I	GCGC	1 cut(s)	1580
HincII	GTYRAC	1 cut(s)	732
HindII	GTYRAC	1 cut(s)	732
HindIII	AAGCTT	1 cut(s)	1258
HinfI	GANTC	8 cut(s)	91, 231, 257, 354, 550, 1334, 1611, 1645
HpaI	GTTAAC	1 cut(s)	732
HpaII	CCGG	2 cut(s)	378, 1697
HphI	GGTGA	2 cut(s)	427, 1423
Hpy166II	GTNNAC	3 cut(s)	250, 732, 947
Hpy188III	TCNNGA	8 cut(s)	88, 126, 151, 851, 1094, 1331, 1482, 1525
Hpy8I	GTNNAC	3 cut(s)	250, 732, 947
HpyCH4III	ACNGT	4 cut(s)	172, 502, 1322, 1657
HpyCH4IV	ACGT	5 cut(s)	611, 926, 1248, 1280, 1638
HpyF3I	CTNAG	7 cut(s)	110, 227, 294, 303, 836, 888, 1430
HpySE526I	ACGT	5 cut(s)	611, 926, 1248, 1280, 1638
Hsp92II	CATG	6 cut(s)	200, 667, 962, 977, 1399, 1633
HspAI	GCGC	1 cut(s)	1580
Ksp22I	TGATCA	1 cut(s)	1356
KspAI	GTTAAC	1 cut(s)	732
Kzo9I	GATC	6 cut(s)	147, 805, 904, 1041, 1356, 1521
LguI	GCTCTTC	1 cut(s)	984
LmnI	GCTCC	3 cut(s)	223, 675, 1229
Lsp1109I	GCAGC	6 cut(s)	407, 469, 574, 619, 1012, 1616
LweI	GCATC	3 cut(s)	229, 327, 382
MaeI	CTAG	2 cut(s)	1094, 1542
MaeII	ACGT	5 cut(s)	611, 926, 1248, 1280, 1638
MaeIII	GTNAC	4 cut(s)	502, 716, 848, 922
MalI	GATC	6 cut(s)	149, 807, 906, 1043, 1358, 1523
MboI	GATC	6 cut(s)	147, 805, 904, 1041, 1356, 1521
MboII	GAAGA	8 cut(s)	67, 86, 225, 481, 878, 971, 1430, 1497
MfeI	CAATTG	1 cut(s)	30
MhlI	GDGCHC	5 cut(s)	228, 252, 913, 1158, 1226
MluCI	AATT	8 cut(s)	16, 30, 418, 511, 684, 939, 995, 1447
MlyI	GAGTC	5 cut(s)	225, 266, 363, 1620, 1654
MmeI	TCCRAC	2 cut(s)	515, 1247
MseI	TTAA	4 cut(s)	731, 938, 1086, 1616
MslI	CAYNNNNRTG	3 cut(s)	362, 1151, 1565
MspA1I	CMGCKG	2 cut(s)	460, 1025
MspI	CCGG	2 cut(s)	378, 1697
MspR9I	CCNGG	2 cut(s)	1505, 1698
MunI	CAATTG	1 cut(s)	30
Mva1269I	GAATGC	1 cut(s)	1184
MvaI	CCWGG	1 cut(s)	1505
MvnI	CGCG	1 cut(s)	540
NciI	CCSGG	1 cut(s)	1698
NcoI	CCATGG	1 cut(s)	1395
NdeII	GATC	6 cut(s)	147, 805, 904, 1041, 1356, 1521
NlaIII	CATG	6 cut(s)	200, 667, 962, 977, 1399, 1633
NlaIV	GGNNCC	2 cut(s)	597, 1176
NmuCI	GTSAC	2 cut(s)	502, 848
NsbI	TGCGCA	1 cut(s)	1581
NspI	RCATGY	2 cut(s)	200, 977
PaeI	GCATGC	1 cut(s)	200
PceI	AGGCCT	1 cut(s)	1435
PciSI	GCTCTTC	1 cut(s)	984
PcsI	WCGNNNNNNNCGW	1 cut(s)	158
PctI	GAATGC	1 cut(s)	1184
PfeI	GAWTC	3 cut(s)	91, 550, 1334
PkrI	GCNGC	7 cut(s)	139, 397, 459, 564, 634, 1027, 1606
PleI	GAGTC	5 cut(s)	225, 265, 362, 1619, 1653
PpsI	GAGTC	5 cut(s)	225, 265, 362, 1619, 1653
Ppu21I	YACGTR	3 cut(s)	612, 927, 1639
PsiI	TTATAA	1 cut(s)	639
Psp124BI	GAGCTC	1 cut(s)	228
Psp6I	CCWGG	1 cut(s)	1503
PspGI	CCWGG	1 cut(s)	1503
PspN4I	GGNNCC	2 cut(s)	597, 1176
PspPI	GGNCC	1 cut(s)	274
PstI	CTGCAG	1 cut(s)	678
PvuII	CAGCTG	1 cut(s)	460
RsaI	GTAC	5 cut(s)	614, 834, 1241, 1304, 1679
RsaNI	GTAC	5 cut(s)	613, 833, 1240, 1303, 1678
RseI	CAYNNNNRTG	3 cut(s)	362, 1151, 1565
SacI	GAGCTC	1 cut(s)	228
SapI	GCTCTTC	1 cut(s)	984
SaqAI	TTAA	4 cut(s)	731, 938, 1086, 1616
SatI	GCNGC	7 cut(s)	138, 396, 458, 563, 633, 1026, 1605
Sau3AI	GATC	6 cut(s)	147, 805, 904, 1041, 1356, 1521
Sau96I	GGNCC	1 cut(s)	274
SbfI	CCTGCAGG	1 cut(s)	678
SchI	GAGTC	5 cut(s)	225, 266, 363, 1620, 1654
ScrFI	CCNGG	2 cut(s)	1505, 1698
SdaI	CCTGCAGG	1 cut(s)	678
SduI	GDGCHC	5 cut(s)	228, 252, 913, 1158, 1226
SfaNI	GCATC	3 cut(s)	229, 327, 382
SfcI	CTRYAG	1 cut(s)	674
SmiMI	CAYNNNNRTG	3 cut(s)	362, 1151, 1565
SnaBI	TACGTA	2 cut(s)	612, 927
SphI	GCATGC	1 cut(s)	200
Sse8387I	CCTGCAGG	1 cut(s)	678
Sse9I	AATT	8 cut(s)	16, 30, 418, 511, 684, 939, 995, 1447
SseBI	AGGCCT	1 cut(s)	1435
SsiI	CCGC	6 cut(s)	5, 137, 540, 1023, 1082, 1114
SspMI	CTAG	2 cut(s)	1094, 1542
SstI	GAGCTC	1 cut(s)	228
StuI	AGGCCT	1 cut(s)	1435
StyD4I	CCNGG	2 cut(s)	1503, 1696
StyI	CCWWGG	1 cut(s)	1395
TaaI	ACNGT	4 cut(s)	172, 502, 1322, 1657
TaiI	ACGT	5 cut(s)	614, 929, 1251, 1283, 1641
TaqI	TCGA	6 cut(s)	360, 794, 804, 907, 1483, 1524
TasI	AATT	8 cut(s)	16, 30, 418, 511, 684, 939, 995, 1447
TatI	WGTACW	1 cut(s)	1239
TauI	GCSGC	1 cut(s)	140
TfiI	GAWTC	3 cut(s)	91, 550, 1334
Tru1I	TTAA	4 cut(s)	731, 938, 1086, 1616
Tru9I	TTAA	4 cut(s)	731, 938, 1086, 1616
TscAI	CASTG	3 cut(s)	27, 175, 1662
TseFI	GTSAC	2 cut(s)	502, 848
TseI	GCWGC	6 cut(s)	395, 457, 562, 632, 1025, 1604
Tsp45I	GTSAC	2 cut(s)	502, 848
TspDTI	ATGAA	5 cut(s)	672, 680, 947, 1097, 1338
TspGWI	ACGGA	1 cut(s)	1457
TspRI	CASTG	3 cut(s)	27, 175, 1662
VneI	GTGCAC	1 cut(s)	248
XagI	CCTNNNNNAGG	1 cut(s)	113
XapI	RAATTY	1 cut(s)	16
XbaI	TCTAGA	1 cut(s)	1093
XceI	RCATGY	2 cut(s)	200, 977
XspI	CTAG	2 cut(s)	1094, 1542

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.