Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0012459

Physical Location & Seq

Genomic Coordinates Reverse (-)

20313086 .. 20314789

Gene Structure 1704 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g17140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGCGGTTCTTGTAAATTCAGTGTCTCCAATTGCACACCCATCGCCAGAAGCCACCAGAAAGACTTGTGGGTTCTTCTCCCACATCAGGAATCTCCAACCCCTTTCACTCAGCAAGGGCTTTTCCAGAGTTTTGGCGACTACCCAGATCACGATTTCTCCGAAAGACACGGTTTTCACCTTGCCCAACTGGAGGCATGCCAAGAATGACAGAAGAAGTAGGGAGCTCAGACTCATTGATGCCTTTCTGCACTTGGAGTCTATGGTGGGGAAGGGCCAGAAGCCTGATGTGGCTCAGGCAACTCAGCTCTTGTATGACCTCTGCAAGGCGAATAAGATGCGAAAGGCGGTCAGAGTCATCGAAATGATGGTTGTTTCCGGCATTATACCTGATGCAGCTTCTTATACTTTCTTGGTGAATTACTTGTGTAAAAGAGGGAACATTGGGTATGCAATGCAGCTGGTAGAGAAGATGGAGGAGTATGGATATCCGACGAATACTGTGACCTACAATTCGCTCGTTAGAGGGCTTTGCGTGCGCGGAAACTTGAATCAGAGCTTGCAGCTTTTGGATAGACTGATACAGAAGGGGTTGGTTCCGAATGTTTATACGTACTCTTTCTTGCTGGAAGCTGCTTATAAGGAAAGAGGTGTCAATGAAGCCATGAAGCTCCTGCAGGAGATAATTGCTAAAGGTGGAAAGCCTAATTTGGTAAGTTACAATGTCTTGTTAACTGGCTTGTGTAAGGAAGGTAGGACTGATGAGGCGTTGCAGTTCTTTAGGAGTTTGCCTTCAATGGGGTTCGATCCAAATGTTGTGAGCTATAACATCGTGTTGAGGAGCTTGTGTTACGAGGGAAGGTGGGAAGAGGCGAATGTGCTTCTGTCTGAGATGGAAGGCGAGGACCGGGCCCCTTCCATAGTTACGTATAACATCTTAATCGGTTCACTTGCACTTCATGGTAGAACTGAGCATGCTCTTGGAGTTTTGGACGAAATGCTGAGAGGTCGTTTCAAACCTACAGCTGCCAGCTATAATCCGATCATTGCTCGTCTCTGCAAAGAGGGGAATGTAGATGGTGCGGTGAAGTGTCTAGACCAAATGATTCATCGGCGGTGCAATCCTAATGAGGGAACATTCAATGCCATTGCTGTGCTCTGTGAGAGAGGTTTGGTGCCAGAGGCATTCTCTATCATTCAAAGCCTCTGTAACAAACAAAAGTTCTCCAGTTTCGAGTTCTACAAAAACGTAATCTCCAGTTTGTGTCGCAAAGGAAACACGTTTCCAGCGTTTCAGATATTGTACGAAATGACCAAGCATGGTTTCACGCCGGATTCTTATACGTATTCATCTCTAATCAGAGGGTTGTGTTTGGAGGGTATGCTTGATGAGGCGATGGAGATTTTCAAGGTAATGGAAGAAAACAACGTTAGGCCTGATACTGACAATTTCAATGCTCTTATACTCGGTTTTTGCAAATCGCGAAGAACAGACTTGTCCTTCCAGGTTTTTGAGATGATGATCGAGAAAGGAAGTATGCCTAATGAGATGACCTACACAATTCTGGTGGAAGGAATTGCGCACGAAGGAGAACTAGAACTGGCAGCCAGAGTCTTAAAAGAGTTGCACCTGCGACATGTTATGAGTTCGAATACAGTGGAAAGATTGATCATGCAGTATGATTTTGAGGATTTACCGGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

568

Amino Acids

63.94

Weight (kDa)

7.85

Isoelectric Point (pI)

38.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	101 - 144	9.8e-08	PPR repeat family
PPR_1	PF12854	127 - 159	7e-07	PPR repeat
PPR_2	PF13041	130 - 178	5.5e-12	PPR repeat family
TPR_24	PF23276	146 - 262	5.7e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	154 - 211	2.9e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	163 - 192	4.9e-06	PPR repeat
PPR_2	PF13041	166 - 211	4.2e-11	PPR repeat family
PPR_2	PF13041	208 - 249	1.9e-07	PPR repeat family
PPR_3	PF13812	223 - 280	6.1e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	231 - 261	2.8e-10	PPR repeat
PPR_2	PF13041	235 - 283	6e-15	PPR repeat family
PPR	PF01535	238 - 268	1.3e-06	PPR repeat
PPR_1	PF12854	266 - 299	1.8e-08	PPR repeat
PPR_2	PF13041	270 - 318	3.3e-13	PPR repeat family
PPR_3	PF13812	294 - 350	1.2e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	305 - 333	2.7e-06	PPR repeat
PPR_2	PF13041	305 - 346	3.6e-08	PPR repeat family
PPR	PF01535	308 - 335	8.2e-06	PPR repeat
PPR_1	PF12854	338 - 368	8.2e-07	PPR repeat
PPR_2	PF13041	340 - 383	1.3e-09	PPR repeat family
PPR_2	PF13041	414 - 457	1.1e-11	PPR repeat family
PPR_long	PF17177	429 - 542	4.6e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	433 - 488	2.6e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	441 - 473	3.5e-12	PPR repeat
PPR	PF01535	447 - 477	2.5e-08	PPR repeat
PPR_2	PF13041	479 - 527	8e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012459)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79080
fragaria_vesca	FvH4_3g15990
malus_domestica	MD05G1216400.v1.1 MD10G1198700.v1.1
prunus_persica	Prupe.4G143000_v2.0.a1
pyrus_communis	pycom05g19870 pycom10g17140
rosa_chinensis	RchiOBHm_Chr5g0026921
rosa_laevigata	RLG00000032970
rosa_multiflora	Rmu_co8463079.1_g000001 Rmu_sc0004223.1_g000006 Rmu_sc0008732.1_g000003
rosa_roxburghii	Rroxscaffold_1G00052550
rosa_rugosa	Rorug05G0095900
rosa_samantha	Rh5AG189500 Rh5BG187100 Rh5CG206800 Rh5DG188800
rosa_wichuraiana	Rw5G017240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	639
AarI	CACCTGC	1 cut(s)	1638
Acc16I	TGCGCA	1 cut(s)	1581
Acc36I	ACCTGC	1 cut(s)	1638
AccB1I	GGYRCC	1 cut(s)	1174
AccII	CGCG	2 cut(s)	540, 1483
AciI	CCGC	5 cut(s)	5, 347, 540, 1082, 1114
AclI	AACGTT	1 cut(s)	1428
AclWI	GGATC	1 cut(s)	800
AcsI	RAATTY	1 cut(s)	16
AfaI	GTAC	2 cut(s)	614, 1304
AfiI	CCNNNNNNNGG	5 cut(s)	87, 192, 325, 797, 1130
AflIII	ACRYGT	2 cut(s)	1278, 1636
AgsI	TTSAA	7 cut(s)	550, 795, 1015, 1141, 1199, 1408, 1453
AjnI	CCWGG	1 cut(s)	1503
AjuI	GAANNNNNNNTTGG	2 cut(s)	1307, 1339
Alw21I	GWGCWC	2 cut(s)	228, 1158
Alw26I	GTCTC	2 cut(s)	30, 1058
AlwI	GGATC	1 cut(s)	800
AoxI	GGCC	3 cut(s)	274, 909, 1433
ApaI	GGGCCC	1 cut(s)	913
ApeKI	GCWGC	6 cut(s)	395, 457, 562, 632, 1025, 1604
ApoI	RAATTY	1 cut(s)	16
ArsI	GACNNNNNNTTYG	2 cut(s)	496, 528
AspLEI	GCGC	2 cut(s)	540, 1582
AspS9I	GGNCC	4 cut(s)	274, 904, 909, 910
AsuC2I	CCSGG	2 cut(s)	908, 1698
AsuHPI	GGTGA	3 cut(s)	169, 427, 1096
AsuII	TTCGAA	1 cut(s)	1649
AvaII	GGWCC	1 cut(s)	904
BaeGI	GKGCMC	1 cut(s)	913
BanI	GGYRCC	1 cut(s)	1174
BanII	GRGCYC	2 cut(s)	228, 913
Bbv12I	GWGCWC	2 cut(s)	228, 1158
BbvI	GCAGC	6 cut(s)	407, 469, 574, 619, 1012, 1616
BccI	CCATC	6 cut(s)	49, 361, 466, 886, 1070, 1390
BcgI	CGANNNNNNTGC	4 cut(s)	24, 58, 319, 353
BciT130I	CCWGG	1 cut(s)	1505
BclI	TGATCA	1 cut(s)	1668
BcnI	CCSGG	2 cut(s)	908, 1698
BcoDI	GTCTC	2 cut(s)	30, 1058
BfaI	CTAG	2 cut(s)	1094, 1595
BfmI	CTRYAG	2 cut(s)	674, 1020
BfuAI	ACCTGC	1 cut(s)	1638
BisI	GCNGC	6 cut(s)	396, 458, 563, 633, 1026, 1605
BlsI	GCNGC	6 cut(s)	397, 459, 564, 634, 1027, 1606
Bme1390I	CCNGG	3 cut(s)	908, 1505, 1698
Bme18I	GGWCC	1 cut(s)	904
BmgT120I	GGNCC	4 cut(s)	274, 904, 909, 910
BmiI	GGNNCC	4 cut(s)	597, 911, 912, 1176
BmrFI	CCNGG	3 cut(s)	908, 1505, 1698
BmsI	GCATC	3 cut(s)	229, 327, 382
BplI	GAGNNNNNCTC	2 cut(s)	1172, 1204
BpmI	CTGGAG	3 cut(s)	211, 1210, 1240
Bpu10I	CCTNAGC	1 cut(s)	294
Bpu14I	TTCGAA	1 cut(s)	1649
BpuMI	CCSGG	2 cut(s)	908, 1698
BsaAI	YACGTR	3 cut(s)	612, 927, 1344
BsaBI	GATNNNNATC	1 cut(s)	1520
BsaXI	ACNNNNNCTCC	6 cut(s)	142, 172, 832, 862, 1238, 1268
Bsc4I	CCNNNNNNNGG	5 cut(s)	87, 192, 325, 797, 1130
Bse1I	ACTGG	5 cut(s)	194, 739, 1227, 1257, 1605
Bse3DI	GCAATG	3 cut(s)	459, 1044, 1146
Bse8I	GATNNNNATC	1 cut(s)	1520
BseBI	CCWGG	1 cut(s)	1505
BseJI	GATNNNNATC	1 cut(s)	1520
BseLI	CCNNNNNNNGG	5 cut(s)	87, 192, 325, 797, 1130
BseMI	GCAATG	3 cut(s)	459, 1044, 1146
BseMII	CTCAG	7 cut(s)	124, 241, 308, 317, 879, 960, 992
BseNI	ACTGG	5 cut(s)	194, 739, 1227, 1257, 1605
BseRI	GAGGAG	2 cut(s)	491, 853
BseSI	GKGCMC	1 cut(s)	913
BseXI	GCAGC	6 cut(s)	407, 469, 574, 619, 1012, 1616
BsgI	GTGCAG	1 cut(s)	233
Bsh1236I	CGCG	2 cut(s)	540, 1483
BshFI	GGCC	3 cut(s)	276, 911, 1435
BshNI	GGYRCC	1 cut(s)	1174
BsiHKAI	GWGCWC	2 cut(s)	228, 1158
BsiSI	CCGG	4 cut(s)	378, 907, 1331, 1697
BslI	CCNNNNNNNGG	5 cut(s)	87, 192, 325, 797, 1130
BsmAI	GTCTC	2 cut(s)	30, 1058
BsmBI	CGTCTC	1 cut(s)	1058
BsmI	GAATGC	1 cut(s)	1184
BsnI	GGCC	3 cut(s)	276, 911, 1435
Bsp119I	TTCGAA	1 cut(s)	1649
Bsp120I	GGGCCC	1 cut(s)	909
Bsp1286I	GDGCHC	3 cut(s)	228, 913, 1158
Bsp143I	GATC	5 cut(s)	147, 805, 1041, 1521, 1668
Bsp68I	TCGCGA	1 cut(s)	1483
BspACI	CCGC	5 cut(s)	5, 347, 540, 1082, 1114
BspANI	GGCC	3 cut(s)	276, 911, 1435
BspCNI	CTCAG	7 cut(s)	123, 240, 307, 316, 880, 961, 993
BspFNI	CGCG	2 cut(s)	540, 1483
BspLI	GGNNCC	4 cut(s)	597, 911, 912, 1176
BspMAI	CTGCAG	1 cut(s)	678
BspMI	ACCTGC	1 cut(s)	1638
BspPI	GGATC	1 cut(s)	800
BspT104I	TTCGAA	1 cut(s)	1649
BspT107I	GGYRCC	1 cut(s)	1174
BsrDI	GCAATG	3 cut(s)	459, 1044, 1146
BsrI	ACTGG	5 cut(s)	194, 739, 1227, 1257, 1605
BssMI	GATC	5 cut(s)	147, 805, 1041, 1521, 1668
Bst2UI	CCWGG	1 cut(s)	1505
Bst4CI	ACNGT	3 cut(s)	172, 502, 1657
Bst6I	CTCTTC	1 cut(s)	861
BstBAI	YACGTR	3 cut(s)	612, 927, 1344
BstBI	TTCGAA	1 cut(s)	1649
BstC8I	GCNNGC	5 cut(s)	198, 536, 560, 975, 1030
BstDEI	CTNAG	7 cut(s)	110, 227, 294, 303, 888, 969, 1001
BstENI	CCTNNNNNAGG	1 cut(s)	323
BstFNI	CGCG	2 cut(s)	540, 1483
BstHHI	GCGC	2 cut(s)	540, 1582
BstKTI	GATC	5 cut(s)	150, 808, 1044, 1524, 1671
BstMAI	GTCTC	2 cut(s)	30, 1058
BstMBI	GATC	5 cut(s)	147, 805, 1041, 1521, 1668
BstMWI	GCNNNNNNNGC	1 cut(s)	535
BstNI	CCWGG	1 cut(s)	1505
BstNSI	RCATGY	3 cut(s)	200, 977, 1640
BstSCI	CCNGG	3 cut(s)	906, 1503, 1696
BstSFI	CTRYAG	2 cut(s)	674, 1020
BstSLI	GKGCMC	1 cut(s)	913
BstSNI	TACGTA	3 cut(s)	612, 927, 1344
BstUI	CGCG	2 cut(s)	540, 1483
BstV1I	GCAGC	6 cut(s)	407, 469, 574, 619, 1012, 1616
BstXI	CCANNNNNNTGG	1 cut(s)	133
BsuRI	GGCC	3 cut(s)	276, 911, 1435
BtgZI	GCGATG	2 cut(s)	27, 1409
BtsIMutI	CAGTG	2 cut(s)	27, 1662
BtuMI	TCGCGA	1 cut(s)	1483
BveI	ACCTGC	1 cut(s)	1638
Cac8I	GCNNGC	5 cut(s)	198, 536, 560, 975, 1030
CfoI	GCGC	2 cut(s)	540, 1582
Cfr13I	GGNCC	4 cut(s)	274, 904, 909, 910
Csp6I	GTAC	2 cut(s)	613, 1303
CspCI	CAANNNNNGTGG	2 cut(s)	1548, 1583
CviAII	CATG	7 cut(s)	197, 664, 959, 974, 1319, 1637, 1672
CviQI	GTAC	2 cut(s)	613, 1303
DdeI	CTNAG	7 cut(s)	110, 227, 294, 303, 888, 969, 1001
DpnI	GATC	5 cut(s)	149, 807, 1043, 1523, 1670
DpnII	GATC	5 cut(s)	147, 805, 1041, 1521, 1668
Eam1104I	CTCTTC	1 cut(s)	861
EarI	CTCTTC	1 cut(s)	861
Ecl136II	GAGCTC	1 cut(s)	226
Eco105I	TACGTA	3 cut(s)	612, 927, 1344
Eco147I	AGGCCT	1 cut(s)	1435
Eco24I	GRGCYC	2 cut(s)	228, 913
Eco32I	GATATC	1 cut(s)	488
Eco47I	GGWCC	1 cut(s)	904
Eco53kI	GAGCTC	1 cut(s)	226
EcoICRI	GAGCTC	1 cut(s)	226
EcoNI	CCTNNNNNAGG	1 cut(s)	323
EcoO109I	RGGNCCY	1 cut(s)	910
EcoRII	CCWGG	1 cut(s)	1503
EcoRV	GATATC	1 cut(s)	488
EcoT38I	GRGCYC	2 cut(s)	228, 913
Esp3I	CGTCTC	1 cut(s)	1058
FaeI	CATG	7 cut(s)	200, 667, 962, 977, 1322, 1640, 1675
FatI	CATG	7 cut(s)	196, 663, 958, 973, 1318, 1636, 1671
FbaI	TGATCA	1 cut(s)	1668
Fnu4HI	GCNGC	6 cut(s)	396, 458, 563, 633, 1026, 1605
FriOI	GRGCYC	2 cut(s)	228, 913
Fsp4HI	GCNGC	6 cut(s)	396, 458, 563, 633, 1026, 1605
FspBI	CTAG	2 cut(s)	1094, 1595
FspI	TGCGCA	1 cut(s)	1581
GlaI	GCGC	2 cut(s)	539, 1581
GluI	GCNGC	6 cut(s)	396, 458, 563, 633, 1026, 1605
GsuI	CTGGAG	3 cut(s)	211, 1210, 1240
HaeIII	GGCC	3 cut(s)	276, 911, 1435
HapII	CCGG	4 cut(s)	378, 907, 1331, 1697
HhaI	GCGC	2 cut(s)	540, 1582
Hin1II	CATG	7 cut(s)	200, 667, 962, 977, 1322, 1640, 1675
Hin6I	GCGC	2 cut(s)	538, 1580
HinP1I	GCGC	2 cut(s)	538, 1580
HincII	GTYRAC	1 cut(s)	732
HindII	GTYRAC	1 cut(s)	732
HinfI	GANTC	8 cut(s)	91, 231, 257, 354, 550, 1105, 1334, 1611
HpaI	GTTAAC	1 cut(s)	732
HpaII	CCGG	4 cut(s)	378, 907, 1331, 1697
HphI	GGTGA	3 cut(s)	169, 427, 1096
Hpy166II	GTNNAC	2 cut(s)	732, 947
Hpy188III	TCNNGA	6 cut(s)	88, 126, 151, 1094, 1482, 1525
Hpy8I	GTNNAC	2 cut(s)	732, 947
Hpy99I	CGWCG	1 cut(s)	496
HpyCH4III	ACNGT	3 cut(s)	172, 502, 1657
HpyCH4IV	ACGT	6 cut(s)	611, 926, 1248, 1280, 1343, 1428
HpyF10VI	GCNNNNNNNGC	1 cut(s)	535
HpyF3I	CTNAG	7 cut(s)	110, 227, 294, 303, 888, 969, 1001
HpySE526I	ACGT	6 cut(s)	611, 926, 1248, 1280, 1343, 1428
Hsp92II	CATG	7 cut(s)	200, 667, 962, 977, 1322, 1640, 1675
HspAI	GCGC	2 cut(s)	538, 1580
Ksp22I	TGATCA	1 cut(s)	1668
KspAI	GTTAAC	1 cut(s)	732
Kzo9I	GATC	5 cut(s)	147, 805, 1041, 1521, 1668
LmnI	GCTCC	3 cut(s)	223, 675, 840
Lsp1109I	GCAGC	6 cut(s)	407, 469, 574, 619, 1012, 1616
LweI	GCATC	3 cut(s)	229, 327, 382
MaeI	CTAG	2 cut(s)	1094, 1595
MaeII	ACGT	6 cut(s)	611, 926, 1248, 1280, 1343, 1428
MaeIII	GTNAC	5 cut(s)	502, 716, 848, 922, 1208
MalI	GATC	5 cut(s)	149, 807, 1043, 1523, 1670
MboI	GATC	5 cut(s)	147, 805, 1041, 1521, 1668
MboII	GAAGA	6 cut(s)	67, 225, 481, 878, 1430, 1497
MfeI	CAATTG	1 cut(s)	30
MhlI	GDGCHC	3 cut(s)	228, 913, 1158
MluCI	AATT	9 cut(s)	16, 30, 418, 511, 684, 706, 1447, 1560, 1575
MlyI	GAGTC	4 cut(s)	225, 266, 363, 1620
MmeI	TCCRAC	2 cut(s)	121, 515
MseI	TTAA	3 cut(s)	731, 938, 1616
MslI	CAYNNNNRTG	2 cut(s)	362, 1151
MspA1I	CMGCKG	2 cut(s)	460, 1025
MspI	CCGG	4 cut(s)	378, 907, 1331, 1697
MspR9I	CCNGG	3 cut(s)	908, 1505, 1698
MunI	CAATTG	1 cut(s)	30
Mva1269I	GAATGC	1 cut(s)	1184
MvaI	CCWGG	1 cut(s)	1505
MvnI	CGCG	2 cut(s)	540, 1483
MwoI	GCNNNNNNNGC	1 cut(s)	535
NciI	CCSGG	2 cut(s)	908, 1698
NdeII	GATC	5 cut(s)	147, 805, 1041, 1521, 1668
NlaIII	CATG	7 cut(s)	200, 667, 962, 977, 1322, 1640, 1675
NlaIV	GGNNCC	4 cut(s)	597, 911, 912, 1176
NmuCI	GTSAC	1 cut(s)	502
NruI	TCGCGA	1 cut(s)	1483
NsbI	TGCGCA	1 cut(s)	1581
NspI	RCATGY	3 cut(s)	200, 977, 1640
NspV	TTCGAA	1 cut(s)	1649
PaeI	GCATGC	2 cut(s)	200, 977
PaqCI	CACCTGC	1 cut(s)	1638
PceI	AGGCCT	1 cut(s)	1435
PciI	ACATGT	1 cut(s)	1636
PcsI	WCGNNNNNNNCGW	2 cut(s)	158, 1286
PctI	GAATGC	1 cut(s)	1184
PfeI	GAWTC	4 cut(s)	91, 550, 1105, 1334
PkrI	GCNGC	6 cut(s)	397, 459, 564, 634, 1027, 1606
PleI	GAGTC	4 cut(s)	225, 265, 362, 1619
PpsI	GAGTC	4 cut(s)	225, 265, 362, 1619
Ppu21I	YACGTR	3 cut(s)	612, 927, 1344
PscI	ACATGT	1 cut(s)	1636
PsiI	TTATAA	1 cut(s)	639
Psp124BI	GAGCTC	1 cut(s)	228
Psp1406I	AACGTT	1 cut(s)	1428
Psp6I	CCWGG	1 cut(s)	1503
PspGI	CCWGG	1 cut(s)	1503
PspN4I	GGNNCC	4 cut(s)	597, 911, 912, 1176
PspOMI	GGGCCC	1 cut(s)	909
PspPI	GGNCC	4 cut(s)	274, 904, 909, 910
PstI	CTGCAG	1 cut(s)	678
PvuII	CAGCTG	2 cut(s)	460, 1025
RruI	TCGCGA	1 cut(s)	1483
RsaI	GTAC	2 cut(s)	614, 1304
RsaNI	GTAC	2 cut(s)	613, 1303
RseI	CAYNNNNRTG	2 cut(s)	362, 1151
SacI	GAGCTC	1 cut(s)	228
SaqAI	TTAA	3 cut(s)	731, 938, 1616
SatI	GCNGC	6 cut(s)	396, 458, 563, 633, 1026, 1605
Sau3AI	GATC	5 cut(s)	147, 805, 1041, 1521, 1668
Sau96I	GGNCC	4 cut(s)	274, 904, 909, 910
SbfI	CCTGCAGG	1 cut(s)	678
SchI	GAGTC	4 cut(s)	225, 266, 363, 1620
ScrFI	CCNGG	3 cut(s)	908, 1505, 1698
SdaI	CCTGCAGG	1 cut(s)	678
SduI	GDGCHC	3 cut(s)	228, 913, 1158
SfaNI	GCATC	3 cut(s)	229, 327, 382
SfcI	CTRYAG	2 cut(s)	674, 1020
SfuI	TTCGAA	1 cut(s)	1649
SinI	GGWCC	1 cut(s)	904
SmiMI	CAYNNNNRTG	2 cut(s)	362, 1151
SnaBI	TACGTA	3 cut(s)	612, 927, 1344
SphI	GCATGC	2 cut(s)	200, 977
Sse8387I	CCTGCAGG	1 cut(s)	678
Sse9I	AATT	9 cut(s)	16, 30, 418, 511, 684, 706, 1447, 1560, 1575
SseBI	AGGCCT	1 cut(s)	1435
SsiI	CCGC	5 cut(s)	5, 347, 540, 1082, 1114
SspMI	CTAG	2 cut(s)	1094, 1595
SstI	GAGCTC	1 cut(s)	228
StuI	AGGCCT	1 cut(s)	1435
StyD4I	CCNGG	3 cut(s)	906, 1503, 1696
TaaI	ACNGT	3 cut(s)	172, 502, 1657
TaiI	ACGT	6 cut(s)	614, 929, 1251, 1283, 1346, 1431
TaqI	TCGA	5 cut(s)	360, 804, 1233, 1524, 1649
TasI	AATT	9 cut(s)	16, 30, 418, 511, 684, 706, 1447, 1560, 1575
TfiI	GAWTC	4 cut(s)	91, 550, 1105, 1334
Tru1I	TTAA	3 cut(s)	731, 938, 1616
Tru9I	TTAA	3 cut(s)	731, 938, 1616
TscAI	CASTG	2 cut(s)	27, 1662
TseFI	GTSAC	1 cut(s)	502
TseI	GCWGC	6 cut(s)	395, 457, 562, 632, 1025, 1604
Tsp45I	GTSAC	1 cut(s)	502
TspDTI	ATGAA	5 cut(s)	672, 680, 947, 1097, 1338
TspRI	CASTG	2 cut(s)	27, 1662
VpaK11BI	GGWCC	1 cut(s)	904
XagI	CCTNNNNNAGG	1 cut(s)	323
XapI	RAATTY	1 cut(s)	16
XbaI	TCTAGA	1 cut(s)	1093
XceI	RCATGY	3 cut(s)	200, 977, 1640
XspI	CTAG	2 cut(s)	1094, 1595

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.