pycom06g00750

Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
683674 .. 687262
3589 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1551 bp
ATGGATCCTTACAGGCACCGCCCTTCAAGTGCTTTCAATTCCCCGTTCTGGACCACCAATTCCGGTGCTCCAGTTTGGAACAACAACTCTTCTCTGACTGTTGGACCCAGAGGGCCAATTCTGCTTGAGGACTACCATCTGGTGGAGAAACTCGCCAATTTTGATAGAGAACGGATCCCAGAGCGTGTTGTCCATGCTAGGGGAGCCAGTGCAAAAGGTTTCTTTGAGGTCACCCATGATATTTCTCACCTTTCATGTGCTGACTTCCTTCGAGCCCCTGGAGTTCAGACACCTGTCATTGTGCGTTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGGGATCCTCGTGGTTTTGCAGTGAAGTTTTACACCAGGGAGGGTAATTTTGACTTGGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCCCGGACATGGTCCATGCTCTAAAACCGAACCCTAAGTCCCACATCCAAGAGAATTGGAGGATCCTTGACTTCTTCTCCCACCATCCAGAAAGCCTGCACATGTTCACCTTCCTATTGGATGACCTGGGAGTTCCACAAGATTACAGGCACATGGAAGGGTCTGGTGTTAACACCTATACTCTTATCAGTAAGGCCGGGAAGGCACACTACGTGAAATTTCATTGGAAACCCACTTGTGGAGTCAAGTGTTTGTTGGAGGATGAGGCTATTAAGGTTGGAGGAGCTAATCACAGCCACGCTACCAAGGATCTCTATGACTCCATCGCAGCTGGCAACTACCCGGAATGGAAACTTTTTATTCAGACAATTGATCCTGATCATGAAGACAGATTTGACTTTGACCCACTTGATGTTACTAAGACCTGGCCTGAAGATGTTCTTCCCCTGCAGCCGGTTGGCCGTTTGGTGCTGAATAAGAACATTGATAACTTCTTTGCAGAGAATGAACAACTTGCTTTCTGCCCTGCCATTGTTGTCCCTGGTGTCTACTATTCAGATGATAAGTTGCTCCAAACTCGAATCTTCTCCTATTCTGATACTCAGAGGCACCGTCTTGGCCCGAACTATCTGCAGCTCCCAGTTAATGCTCCCAAGTGTTCTCATCACAACAATCACCATGAAGGATTTATGAATTTCATGCACAGAGATGAGGAGGTTAACTACTTCCCATCAAGGTATGATCCTGCTCGCCATGCTGAGACCTTCCCAATTCCTTCTAATATCTGCACTGGAAGGCGTGAGAAGTGCGTCATTGAGAAGGAGAACAACTTCAAGCAACCCGGAGAGAGATACAGATCTTGGGCACCCGACAGGCAAGAGCGATTCCTCCACCGATGGGTTGATGCCCTATCCGACCCTCGTGTCACCTATGAAATTCGCAGCATTTGGATCTCGTACTGGTCTCAGGTGAGTCCATACGTGCAAAGTATTCGCATTTGTGAATTGGTATATTGGATTAAAAAATTAAAAAAAATTAAAAAATTAAATAATAAAAATAGAAAGAGAGATTTGAGGGAATCAGTGGGGGATGGGTGGTGA

Protein Analysis

517

Amino Acids

60.01

Weight (kDa)

8.04

Isoelectric Point (pI)

39.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Catalase PF00199 18 - 397 4.5e-173 Catalase
Catalase-rel PF06628 423 - 476 4.7e-10 Catalase-related immune-responsive
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010839)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1373
AccB1I GGYRCC 3 cut(s) 15, 1059, 1315
AccB7I CCANNNNNTGG 1 cut(s) 142
AccI GTMKAC 1 cut(s) 999
AciI CCGC 1 cut(s) 19
AcoI YGGCCR 1 cut(s) 910
AcsI RAATTY 4 cut(s) 449, 668, 1144, 1386
AcuI CTGAAG 1 cut(s) 903
AdeI CACNNNGTG 1 cut(s) 664
AfaI GTAC 1 cut(s) 1409
AfiI CCNNNNNNNGG 7 cut(s) 48, 142, 199, 460, 689, 904, 1348
AflIII ACRYGT 1 cut(s) 552
AgsI TTSAA 3 cut(s) 27, 37, 1285
AjnI CCWGG 5 cut(s) 277, 383, 576, 875, 991
AloI GAACNNNNNNTCC 2 cut(s) 473, 505
AluBI AGCT 3 cut(s) 737, 782, 1087
AluI AGCT 3 cut(s) 737, 782, 1087
Alw21I GWGCWC 1 cut(s) 70
Alw26I GTCTC 2 cut(s) 1205, 1419
AoxI GGCC 5 cut(s) 113, 645, 878, 910, 1069
ApeKI GCWGC 5 cut(s) 333, 779, 901, 1084, 1392
ApoI RAATTY 4 cut(s) 449, 668, 1144, 1386
ArsI GACNNNNNNTTYG 2 cut(s) 473, 505
Asp700I GAANNNNTTC 2 cut(s) 888, 1280
AspS9I GGNCC 5 cut(s) 51, 104, 113, 463, 1070
AsuC2I CCSGG 4 cut(s) 455, 649, 794, 1293
AsuHPI GGTGA 6 cut(s) 223, 239, 550, 1118, 1369, 1432
AvaII GGWCC 3 cut(s) 51, 104, 463
AxyI CCTNAGG 1 cut(s) 347
BaeGI GKGCMC 1 cut(s) 1318
BamHI GGATCC 4 cut(s) 4, 174, 352, 513
BanI GGYRCC 3 cut(s) 15, 1059, 1315
BanII GRGCYC 1 cut(s) 277
BarI GAAGNNNNNNTAC 2 cut(s) 644, 676
BauI CACGAG 2 cut(s) 357, 1371
BbsI GAAGAC 1 cut(s) 843
Bbv12I GWGCWC 1 cut(s) 70
BbvI GCAGC 5 cut(s) 345, 791, 913, 1096, 1404
BccI CCATC 7 cut(s) 144, 434, 543, 782, 1189, 1341, 1535
BceAI ACGGC 1 cut(s) 897
BcgI CGANNNNNNTGC 4 cut(s) 1063, 1097, 1424, 1458
BciT130I CCWGG 5 cut(s) 279, 385, 578, 877, 993
BclI TGATCA 1 cut(s) 829
BcnI CCSGG 4 cut(s) 455, 649, 794, 1293
BcoDI GTCTC 2 cut(s) 1205, 1419
BfaI CTAG 1 cut(s) 198
BfmI CTRYAG 2 cut(s) 899, 1082
BglI GCCNNNNNGGC 1 cut(s) 653
BglII AGATCT 1 cut(s) 1307
BisI GCNGC 5 cut(s) 334, 780, 902, 1085, 1393
BlsI GCNGC 5 cut(s) 335, 781, 903, 1086, 1394
Bme1390I CCNGG 9 cut(s) 279, 385, 455, 578, 649, 794, 877, 993, 1293
Bme18I GGWCC 3 cut(s) 51, 104, 463
BmgT120I GGNCC 5 cut(s) 51, 104, 113, 463, 1070
BmiI GGNNCC 9 cut(s) 6, 17, 106, 176, 205, 354, 515, 1061, 1317
BmrFI CCNGG 9 cut(s) 279, 385, 455, 578, 649, 794, 877, 993, 1293
BmrI ACTGGG 1 cut(s) 1085
BmsI GCATC 1 cut(s) 1345
BmuI ACTGGG 1 cut(s) 1085
BoxI GACNNNNGTC 1 cut(s) 293
BpiI GAAGAC 1 cut(s) 843
BplI GAGNNNNNCTC 2 cut(s) 340, 372
BpmI CTGGAG 2 cut(s) 54, 300
BpuEI CTTGAG 1 cut(s) 146
BpuMI CCSGG 4 cut(s) 455, 649, 794, 1293
BsaAI YACGTR 2 cut(s) 664, 1432
BsaBI GATNNNNATC 2 cut(s) 828, 1306
BsaI GGTCTC 2 cut(s) 1205, 1419
BsaJI CCNNGG 5 cut(s) 277, 384, 577, 756, 991
BsaWI WCCGGW 1 cut(s) 62
BsaXI ACNNNNNCTCC 2 cut(s) 512, 542
Bsc4I CCNNNNNNNGG 7 cut(s) 48, 142, 199, 460, 689, 904, 1348
Bse118I RCCGGY 1 cut(s) 904
Bse1I ACTGG 5 cut(s) 71, 207, 1091, 1246, 1415
Bse21I CCTNAGG 1 cut(s) 347
Bse8I GATNNNNATC 2 cut(s) 828, 1306
BseBI CCWGG 5 cut(s) 279, 385, 578, 877, 993
BseDI CCNNGG 5 cut(s) 277, 384, 577, 756, 991
BseGI GGATG 5 cut(s) 495, 535, 577, 718, 1546
BseJI GATNNNNATC 2 cut(s) 828, 1306
BseLI CCNNNNNNNGG 7 cut(s) 48, 142, 199, 460, 689, 904, 1348
BseMII CTCAG 4 cut(s) 338, 1067, 1200, 1430
BseNI ACTGG 5 cut(s) 71, 207, 1091, 1246, 1415
BseRI GAGGAG 2 cut(s) 747, 1178
BseSI GKGCMC 1 cut(s) 1318
BseXI GCAGC 5 cut(s) 345, 791, 913, 1096, 1404
BsgI GTGCAG 2 cut(s) 533, 1222
BshFI GGCC 5 cut(s) 115, 647, 880, 912, 1071
BshNI GGYRCC 3 cut(s) 15, 1059, 1315
BsiHKAI GWGCWC 1 cut(s) 70
BsiSI CCGG 6 cut(s) 63, 455, 648, 794, 905, 1293
BslFI GGGAC 2 cut(s) 475, 974
BslI CCNNNNNNNGG 7 cut(s) 48, 142, 199, 460, 689, 904, 1348
BsmAI GTCTC 2 cut(s) 1205, 1419
BsmFI GGGAC 2 cut(s) 475, 974
BsnI GGCC 5 cut(s) 115, 647, 880, 912, 1071
Bso31I GGTCTC 2 cut(s) 1205, 1419
Bsp1286I GDGCHC 3 cut(s) 70, 277, 1318
BspACI CCGC 1 cut(s) 19
BspANI GGCC 5 cut(s) 115, 647, 880, 912, 1071
BspCNI CTCAG 4 cut(s) 339, 1066, 1201, 1429
BspHI TCATGA 1 cut(s) 832
BspLI GGNNCC 9 cut(s) 6, 17, 106, 176, 205, 354, 515, 1061, 1317
BspMAI CTGCAG 2 cut(s) 903, 1086
BspT107I GGYRCC 3 cut(s) 15, 1059, 1315
BspTNI GGTCTC 2 cut(s) 1205, 1419
BsrFI RCCGGY 1 cut(s) 904
BsrI ACTGG 5 cut(s) 71, 207, 1091, 1246, 1415
BssAI RCCGGY 1 cut(s) 904
BssECI CCNNGG 5 cut(s) 277, 384, 577, 756, 991
BssSI CACGAG 2 cut(s) 357, 1371
BssT1I CCWWGG 1 cut(s) 756
Bst2BI CACGAG 2 cut(s) 357, 1371
Bst2UI CCWGG 5 cut(s) 279, 385, 578, 877, 993
Bst4CI ACNGT 3 cut(s) 100, 316, 1064
Bst6I CTCTTC 1 cut(s) 94
BstBAI YACGTR 2 cut(s) 664, 1432
BstC8I GCNNGC 3 cut(s) 548, 784, 1201
BstDEI CTNAG 6 cut(s) 347, 486, 870, 1053, 1209, 1416
BstEII GGTNACC 1 cut(s) 229
BstF5I GGATG 5 cut(s) 495, 535, 577, 718, 1546
BstMAI GTCTC 2 cut(s) 1205, 1419
BstMWI GCNNNNNNNGC 4 cut(s) 121, 203, 653, 1205
BstNI CCWGG 5 cut(s) 279, 385, 578, 877, 993
BstNSI RCATGY 1 cut(s) 556
BstPAI GACNNNNGTC 1 cut(s) 293
BstPI GGTNACC 1 cut(s) 229
BstSCI CCNGG 9 cut(s) 277, 383, 453, 576, 647, 792, 875, 991, 1291
BstSFI CTRYAG 2 cut(s) 899, 1082
BstSLI GKGCMC 1 cut(s) 1318
BstV1I GCAGC 5 cut(s) 345, 791, 913, 1096, 1404
BstV2I GAAGAC 1 cut(s) 843
BstX2I RGATCY 7 cut(s) 4, 174, 352, 513, 760, 1307, 1401
BstXI CCANNNNNNTGG 1 cut(s) 329
BstYI RGATCY 7 cut(s) 4, 174, 352, 513, 760, 1307, 1401
Bsu36I CCTNAGG 1 cut(s) 347
BsuRI GGCC 5 cut(s) 115, 647, 880, 912, 1071
BtgZI GCGATG 1 cut(s) 760
BtsCI GGATG 5 cut(s) 495, 535, 577, 718, 1546
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 5 cut(s) 214, 312, 375, 1239, 1539
Cac8I GCNNGC 3 cut(s) 548, 784, 1201
CciI TCATGA 1 cut(s) 832
Cfr10I RCCGGY 1 cut(s) 904
Cfr13I GGNCC 5 cut(s) 51, 104, 113, 463, 1070
CseI GACGC 1 cut(s) 1249
Csp6I GTAC 1 cut(s) 1408
CviQI GTAC 1 cut(s) 1408
DdeI CTNAG 6 cut(s) 347, 486, 870, 1053, 1209, 1416
DraIII CACNNNGTG 1 cut(s) 664
DrdI GACNNNNNNGTC 1 cut(s) 1373
DseDI GACNNNNNNGTC 1 cut(s) 1373
EaeI YGGCCR 1 cut(s) 910
Eam1104I CTCTTC 1 cut(s) 94
EarI CTCTTC 1 cut(s) 94
Eco130I CCWWGG 1 cut(s) 756
Eco24I GRGCYC 1 cut(s) 277
Eco31I GGTCTC 2 cut(s) 1205, 1419
Eco47I GGWCC 3 cut(s) 51, 104, 463
Eco57I CTGAAG 1 cut(s) 903
Eco81I CCTNAGG 1 cut(s) 347
Eco91I GGTNACC 1 cut(s) 229
EcoO65I GGTNACC 1 cut(s) 229
EcoRII CCWGG 5 cut(s) 277, 383, 576, 875, 991
EcoT14I CCWWGG 1 cut(s) 756
EcoT38I GRGCYC 1 cut(s) 277
ErhI CCWWGG 1 cut(s) 756
FalI AAGNNNNNCTT 2 cut(s) 876, 908
FaqI GGGAC 2 cut(s) 475, 974
FbaI TGATCA 1 cut(s) 829
FblI GTMKAC 1 cut(s) 999
Fnu4HI GCNGC 5 cut(s) 334, 780, 902, 1085, 1393
FokI GGATG 4 cut(s) 482, 522, 584, 725
FriOI GRGCYC 1 cut(s) 277
Fsp4HI GCNGC 5 cut(s) 334, 780, 902, 1085, 1393
FspBI CTAG 1 cut(s) 198
GluI GCNGC 5 cut(s) 334, 780, 902, 1085, 1393
GsuI CTGGAG 2 cut(s) 54, 300
HaeIII GGCC 5 cut(s) 115, 647, 880, 912, 1071
HapII CCGG 6 cut(s) 63, 455, 648, 794, 905, 1293
HgaI GACGC 1 cut(s) 1249
HincII GTYRAC 2 cut(s) 622, 1171
HindII GTYRAC 2 cut(s) 622, 1171
HinfI GANTC 6 cut(s) 693, 770, 1032, 1335, 1423, 1529
HpaI GTTAAC 2 cut(s) 622, 1171
HpaII CCGG 6 cut(s) 63, 455, 648, 794, 905, 1293
HphI GGTGA 6 cut(s) 223, 239, 550, 1118, 1369, 1432
Hpy166II GTNNAC 4 cut(s) 558, 622, 1000, 1171
Hpy188I TCNGA 7 cut(s) 96, 288, 816, 1009, 1048, 1056, 1366
Hpy188III TCNNGA 4 cut(s) 49, 539, 827, 833
Hpy8I GTNNAC 4 cut(s) 558, 622, 1000, 1171
HpyCH4III ACNGT 3 cut(s) 100, 316, 1064
HpyCH4IV ACGT 2 cut(s) 663, 1431
HpyCH4V TGCA 9 cut(s) 212, 368, 550, 901, 950, 1084, 1153, 1239, 1435
HpyF10VI GCNNNNNNNGC 4 cut(s) 121, 203, 653, 1205
HpyF3I CTNAG 6 cut(s) 347, 486, 870, 1053, 1209, 1416
HpySE526I ACGT 2 cut(s) 663, 1431
Ksp22I TGATCA 1 cut(s) 829
KspAI GTTAAC 2 cut(s) 622, 1171
LmnI GCTCC 6 cut(s) 73, 203, 734, 1026, 1092, 1105
Lsp1109I GCAGC 5 cut(s) 345, 791, 913, 1096, 1404
LweI GCATC 1 cut(s) 1345
MaeI CTAG 1 cut(s) 198
MaeII ACGT 2 cut(s) 663, 1431
MaeIII GTNAC 3 cut(s) 229, 865, 1375
MboII GAAGA 6 cut(s) 81, 517, 848, 884, 896, 1027
MfeI CAATTG 1 cut(s) 819
MflI RGATCY 7 cut(s) 4, 174, 352, 513, 760, 1307, 1401
MhlI GDGCHC 3 cut(s) 70, 277, 1318
MlyI GAGTC 3 cut(s) 702, 764, 1432
MmeI TCCRAC 4 cut(s) 82, 687, 709, 1389
MroXI GAANNNNTTC 2 cut(s) 888, 1280
MseI TTAA 8 cut(s) 621, 723, 1095, 1170, 1470, 1478, 1488, 1496
MslI CAYNNNNRTG 2 cut(s) 327, 1158
MspA1I CMGCKG 1 cut(s) 782
MspI CCGG 6 cut(s) 63, 455, 648, 794, 905, 1293
MspR9I CCNGG 9 cut(s) 279, 385, 455, 578, 649, 794, 877, 993, 1293
MunI CAATTG 1 cut(s) 819
MvaI CCWGG 5 cut(s) 279, 385, 578, 877, 993
MwoI GCNNNNNNNGC 4 cut(s) 121, 203, 653, 1205
NciI CCSGG 4 cut(s) 455, 649, 794, 1293
NlaIV GGNNCC 9 cut(s) 6, 17, 106, 176, 205, 354, 515, 1061, 1317
NmuCI GTSAC 2 cut(s) 229, 1375
NspI RCATGY 1 cut(s) 556
PagI TCATGA 1 cut(s) 832
PciI ACATGT 1 cut(s) 552
PdmI GAANNNNTTC 2 cut(s) 888, 1280
PfeI GAWTC 3 cut(s) 1032, 1335, 1529
PflFI GACNNNGTC 1 cut(s) 461
PflMI CCANNNNNTGG 1 cut(s) 142
PfoI TCCNGGA 1 cut(s) 453
PkrI GCNGC 5 cut(s) 335, 781, 903, 1086, 1394
PleI GAGTC 3 cut(s) 701, 764, 1431
PpsI GAGTC 3 cut(s) 701, 764, 1431
Ppu21I YACGTR 2 cut(s) 664, 1432
PscI ACATGT 1 cut(s) 552
PshAI GACNNNNGTC 1 cut(s) 293
Psp6I CCWGG 5 cut(s) 277, 383, 576, 875, 991
PspEI GGTNACC 1 cut(s) 229
PspGI CCWGG 5 cut(s) 277, 383, 576, 875, 991
PspN4I GGNNCC 9 cut(s) 6, 17, 106, 176, 205, 354, 515, 1061, 1317
PspPI GGNCC 5 cut(s) 51, 104, 113, 463, 1070
PstI CTGCAG 2 cut(s) 903, 1086
PsuI RGATCY 7 cut(s) 4, 174, 352, 513, 760, 1307, 1401
PsyI GACNNNGTC 1 cut(s) 461
PvuII CAGCTG 1 cut(s) 782
RsaI GTAC 1 cut(s) 1409
RsaNI GTAC 1 cut(s) 1408
RseI CAYNNNNRTG 2 cut(s) 327, 1158
SaqAI TTAA 8 cut(s) 621, 723, 1095, 1170, 1470, 1478, 1488, 1496
SatI GCNGC 5 cut(s) 334, 780, 902, 1085, 1393
Sau96I GGNCC 5 cut(s) 51, 104, 113, 463, 1070
SchI GAGTC 3 cut(s) 702, 764, 1432
ScrFI CCNGG 9 cut(s) 279, 385, 455, 578, 649, 794, 877, 993, 1293
SduI GDGCHC 3 cut(s) 70, 277, 1318
SfaNI GCATC 1 cut(s) 1345
SfcI CTRYAG 2 cut(s) 899, 1082
SinI GGWCC 3 cut(s) 51, 104, 463
SmiMI CAYNNNNRTG 2 cut(s) 327, 1158
SmlI CTYRAG 1 cut(s) 125
SmoI CTYRAG 1 cut(s) 125
SsiI CCGC 1 cut(s) 19
SspMI CTAG 1 cut(s) 198
StyD4I CCNGG 9 cut(s) 277, 383, 453, 576, 647, 792, 875, 991, 1291
StyI CCWWGG 1 cut(s) 756
TaaI ACNGT 3 cut(s) 100, 316, 1064
TaiI ACGT 2 cut(s) 666, 1434
TaqI TCGA 2 cut(s) 271, 1030
TfiI GAWTC 3 cut(s) 1032, 1335, 1529
Tru1I TTAA 8 cut(s) 621, 723, 1095, 1170, 1470, 1478, 1488, 1496
Tru9I TTAA 8 cut(s) 621, 723, 1095, 1170, 1470, 1478, 1488, 1496
TscAI CASTG 5 cut(s) 214, 319, 375, 1246, 1539
TseFI GTSAC 2 cut(s) 229, 1375
TseI GCWGC 5 cut(s) 333, 779, 901, 1084, 1392
Tsp45I GTSAC 2 cut(s) 229, 1375
TspDTI ATGAA 9 cut(s) 243, 461, 662, 849, 972, 1138, 1146, 1157, 1398
TspGWI ACGGA 2 cut(s) 187, 425
TspRI CASTG 5 cut(s) 214, 319, 375, 1246, 1539
Tth111I GACNNNGTC 1 cut(s) 461
Van91I CCANNNNNTGG 1 cut(s) 142
VpaK11BI GGWCC 3 cut(s) 51, 104, 463
XapI RAATTY 4 cut(s) 449, 668, 1144, 1386
XceI RCATGY 1 cut(s) 556
XmiI GTMKAC 1 cut(s) 999
XmnI GAANNNNTTC 2 cut(s) 888, 1280
XspI CTAG 1 cut(s) 198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.