Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0011099

Physical Location & Seq

Genomic Coordinates Forward (+)

3135277 .. 3141577

Gene Structure 6301 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGGGGAGTGGAGTCTCCACCCTCTCCGACTGCTTCCGGCCGGTTCACCGGACCAACCACCACCAGCCGGACCACAACGACGTTGTGTTCGCGGCGTCCGAGCCCCTGGACGAAACCCTAGGCCACTCTTTCTGCTACGTCCGCAACTCAGCTCGCTTCCTCTCTCCTACTCAGTCGGATCGCTTCATTTCCCCTTCCAACTCCCTCCGGTTCTCGCCTCCTCACGAATCCGGTGCCAGAACCCGACCCGGATTTCACGAAACCGGGTTCAAAGCCATCTCCGGGGCTTCCGTCAGTGCCAATAGCGCTACTCCCAGAACTGTCCTCCAGCTTGACAATATTTACGACGATGCCACTGAGAGCGTTCTCGGCGGCTGCGGTGGTGGCGTCAGGGGGAGTCTAGTCAATGGTTTTGAGAGTACGTCGTCGTTTAGCGCCTTGCCTCTTCAGCCCGTGCCACGTGGCGGCGAGCGAGATCCCTCGGGTCCAATGGAGCGGCCGGGCTTCTTCCTCTCTGGCCCATTAGGGAGCGGCGCCCTCTCGGGTCCCCTCGACCCGAACGCCAACCCAGCCGGGCCCGACGGGCGGGATCACTTCTCGGCGCCGCTCGGTGGGTTTTACGTGAAGAGGCGGAAGAAGGGCATTTCGGGGATTGGGAAGGCGTTGTATCGGAATTTCTCGGAGAAGAAGCAGCGGCCCTGGGTTGTTCCGGTGCTCAATTTCGTCGGCCGTAAGGACAGCCCACCGTCGATCGGGGTGGAGCCTGAGCCCAAGAGCGAGAGCAATGTCCAGTGGGCTCTTGGCAAAGCTGGGGAGGATCGTGTACATGTGGTTGTATCGGAAGAGCAGGGGTGGCTGTTTGTTGGGATTTACGATGGGTTTAATGGCCCCGATGCTCCGGAATTTCTGATGGGTAATCTCTACCGTGCATTTTACAATGAGCTTCAGGGTTTATTTTGGGAGGTTGATGACGATGATCAAGCTCCGGAAGCCGAAGAAGCCAATAACAGTGACCCACCACCAAATGTAGCTTCAGAGAGTGAAGTAGTTGTAGAGGTCCAAACCAAAAATGAATCGACTTCAGATTCTGACCCCTTGCCCGAAGCTGATCGGGAAAAGAGAGTGACGTTTCAATCTGAGGGTGTCAGGAGGCGGCGGCTTTGGGAATTGCTGGCTGAGGCTGAGGCTGAAGAGGGGCTTGACCTTTCGGGTTCCGAGAGGTTTGCATTTTCTGTTGATGACGCAGTTACAGTGAGCAATGAGGGTTCGGGTTCTGCAGTGAGTAGGCGATGGCTTTTGCTGTCGAAATTGAAACAAGGCTTGACTAAGCACAAGGAAGGTCAGGGTCATGGTAGGAAATTGTTTCCATGGAGGTTTGGTTTGGAGGATAAAGAAAAGGTTGAGGTTGAGAACAGAGTGGAGGAGAGGTCTGCTCCAACTGGTAGGAAGATGAAGGAGGGCCCGGTAGATCACGAGTTGGTGTTGAGTGCATTGTCAAGGGCTTTACATGTGACGGAGGAAGCGTATTTAGAGATGACCGATAAGGTTCATGATACGAATCCAGAACTTGCATTGATGGGGTCGTGTTTGTTGGTTGTGTTAATGAGGGATGAGGATGTGTATGTGATGAATTTGGGGGATAGTCGGGCCATTGTTGCCCATTATGAGTCGGAGGAAGGTGATTCAAGCAGTGCTTTGACAGGGCACAAGGACAATGGGTTGAACGCTGAGGATATAACTGAGTCATCCTCAGCTGTGGCCAGCAAGGCGGCTACTCAAGCAGTGCGATTGACTGCATTGCAGCTGTCCACTGATCACAGCACGAGCATTGAAGAAGAAGTAACAAGAATAAAAAATGAACACCCAGATGACAAACATTGTATTGTCAATGATAGAGTGAAAGGTCGTCTTAAAGTTACCAGAGCGTTTGGGGCTGGATTTCTGAAACAGCCCAAGTGGAATGACACGTTATTGGAAATGTTTCGAAATGAGTACATTGGTACCGCACCATACATATCATGTTTGCCTTCTCTTAGGCACCATAGACTCTGCCCTAGTGATCAGTTCTTAATCCTGTCATCAGACGGTTTGTATCAGTATTTTAGCAATCAGGAAGTAGTTTCACATGTTGAGAATTTTATGGAGAAGTTTCCAGATGGAGACCCTGCACAACACCTGATAGAGGAGCTTCTTTTCCGTGCTGCAAAGAAAGCTGGAATGGATTTCCATGAATTACTGGACATCCCGCAAGGAGCTCGCAGGAAGTATCATGACGACGTCACGGTTATGGTTATATCGCTTGAAGGAAGAATCTGGAAGTCATCAGGAAAGTACCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005623 GO:0005886 GO:0006355 GO:0008150 GO:0008289 GO:0009653 GO:0009826 GO:0009888 GO:0009889 GO:0009933 GO:0009987 GO:0010073 GO:0010074 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0019827 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043167 GO:0043168 GO:0044464 GO:0048507 GO:0048532 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0060560 GO:0065007 GO:0071840 GO:0071944 GO:0080090 GO:0098727 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C

Protein Analysis

780

Amino Acids

85.9

Weight (kDa)

5.32

Isoelectric Point (pI)

45.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PP2C	PF00481	600 - 728	2.9e-21	Protein phosphatase 2C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35350
fragaria_vesca	FvH4_5g21630 FvH4_5g21630
malus_domestica	MD06G1031300.v1.1 MD16G1277400.v1.1
prunus_persica	Prupe.5G040900_v2.0.a1
pyrus_communis	pycom06g02610 pycom16g24670
rosa_chinensis	RchiOBHm_Chr7g0209091
rosa_laevigata	RLG00000003168
rosa_multiflora	Rmu_co8472153.1_g000001 Rmu_sc0000821.1_g000009 Rmu_sc0012788.1_g000001
rosa_roxburghii	Rroxscaffold_3G00249760
rosa_rugosa	Rorug07G0109000
rosa_samantha	Rh7AG243400 Rh7BG238500 Rh7CG258600 Rh7DG250400
rosa_wichuraiana	Rw7G020630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2280
Acc65I	GGTACC	1 cut(s)	2000
AccB1I	GGYRCC	5 cut(s)	233, 533, 601, 2000, 2037
AccBSI	CCGCTC	3 cut(s)	496, 531, 607
AccII	CGCG	1 cut(s)	92
AccIII	TCCGGA	2 cut(s)	898, 985
AclWI	GGATC	4 cut(s)	186, 470, 597, 825
AcoI	YGGCCR	4 cut(s)	38, 497, 727, 1758
AcsI	RAATTY	4 cut(s)	673, 902, 1630, 2134
AcuI	CTGAAG	5 cut(s)	431, 929, 1017, 1065, 1209
AcvI	CACGTG	1 cut(s)	461
AcyI	GRCGYC	5 cut(s)	95, 387, 534, 602, 2277
AfaI	GTAC	5 cut(s)	421, 825, 1994, 2002, 2333
AfeI	AGCGCT	1 cut(s)	307
AfiI	CCNNNNNNNGG	7 cut(s)	67, 282, 464, 585, 611, 752, 2182
AflIII	ACRYGT	4 cut(s)	826, 1507, 1965, 2125
AgsI	TTSAA	7 cut(s)	271, 1133, 1312, 1686, 1723, 1832, 2303
AjnI	CCWGG	2 cut(s)	105, 698
AjuI	GAANNNNNNNTTGG	2 cut(s)	1015, 1047
Alw21I	GWGCWC	2 cut(s)	717, 2257
Alw26I	GTCTC	2 cut(s)	19, 2154
AlwI	GGATC	4 cut(s)	186, 470, 597, 825
AlwNI	CAGNNNCTG	1 cut(s)	1088
Ama87I	CYCGRG	2 cut(s)	481, 541
Aor13HI	TCCGGA	2 cut(s)	898, 985
Aor51HI	AGCGCT	1 cut(s)	307
ApaI	GGGCCC	2 cut(s)	579, 1463
ApeKI	GCWGC	4 cut(s)	375, 691, 1801, 2201
ApoI	RAATTY	4 cut(s)	673, 902, 1630, 2134
ArsI	GACNNNNNNTTYG	2 cut(s)	71, 103
Asp700I	GAANNNNTTC	1 cut(s)	1980
Asp718I	GGTACC	1 cut(s)	2000
AspA2I	CCTAGG	1 cut(s)	118
AspLEI	GCGC	4 cut(s)	308, 437, 536, 604
AsuC2I	CCSGG	6 cut(s)	249, 265, 283, 501, 574, 1463
AsuHPI	GGTGA	2 cut(s)	38, 1691
AsuII	TTCGAA	1 cut(s)	1984
AvaI	CYCGRG	2 cut(s)	481, 541
AvaII	GGWCC	5 cut(s)	51, 70, 485, 545, 1057
AvrII	CCTAGG	1 cut(s)	118
BaeGI	GKGCMC	3 cut(s)	579, 1463, 1707
BaeI	ACNNNNGTAYC	2 cut(s)	1984, 2017
BalI	TGGCCA	1 cut(s)	1760
BanI	GGYRCC	5 cut(s)	233, 533, 601, 2000, 2037
BanII	GRGCYC	6 cut(s)	105, 579, 771, 799, 1463, 2257
BauI	CACGAG	2 cut(s)	1472, 1822
BbrPI	CACGTG	1 cut(s)	461
Bbv12I	GWGCWC	2 cut(s)	717, 2257
BbvCI	CCTCAGC	4 cut(s)	1176, 1182, 1728, 1750
BbvI	GCAGC	4 cut(s)	362, 703, 1813, 2188
BccI	CCATC	6 cut(s)	284, 869, 904, 1284, 1570, 2150
BceAI	ACGGC	1 cut(s)	714
BcgI	CGANNNNNNTGC	6 cut(s)	215, 249, 1205, 1239, 2237, 2271
BciT130I	CCWGG	2 cut(s)	107, 700
BclI	TGATCA	3 cut(s)	976, 1813, 2059
BcnI	CCSGG	6 cut(s)	249, 265, 283, 501, 574, 1463
BcoDI	GTCTC	2 cut(s)	19, 2154
BfaI	CTAG	3 cut(s)	119, 401, 2055
BfmI	CTRYAG	1 cut(s)	1275
BfoI	RGCGCY	4 cut(s)	309, 438, 537, 605
BglI	GCCNNNNNGGC	2 cut(s)	583, 1766
BlnI	CCTAGG	1 cut(s)	118
Bme1390I	CCNGG	8 cut(s)	107, 249, 265, 283, 501, 574, 700, 1463
Bme18I	GGWCC	5 cut(s)	51, 70, 485, 545, 1057
BmeT110I	CYCGRG	2 cut(s)	481, 541
BmrFI	CCNGG	8 cut(s)	107, 249, 265, 283, 501, 574, 700, 1463
BmsI	GCATC	2 cut(s)	340, 883
BplI	GAGNNNNNCTC	4 cut(s)	1417, 1449, 1733, 1765
BpmI	CTGGAG	1 cut(s)	311
Bpu10I	CCTNAGC	5 cut(s)	765, 1176, 1182, 1728, 1750
Bpu14I	TTCGAA	1 cut(s)	1984
BpuEI	CTTGAG	1 cut(s)	1761
BpuMI	CCSGG	6 cut(s)	249, 265, 283, 501, 574, 1463
BsaAI	YACGTR	2 cut(s)	461, 622
BsaBI	GATNNNNATC	1 cut(s)	1557
BsaHI	GRCGYC	5 cut(s)	95, 387, 534, 602, 2277
BsaI	GGTCTC	1 cut(s)	2154
BsaJI	CCNNGG	7 cut(s)	105, 118, 282, 480, 698, 699, 1367
BsaWI	WCCGGW	6 cut(s)	48, 207, 230, 709, 898, 985
BsaXI	ACNNNNNCTCC	6 cut(s)	1363, 1393, 1412, 1442, 1508, 1538
Bsc4I	CCNNNNNNNGG	7 cut(s)	67, 282, 464, 585, 611, 752, 2182
Bse118I	RCCGGY	1 cut(s)	40
Bse1I	ACTGG	3 cut(s)	790, 1444, 2241
Bse3DI	GCAATG	3 cut(s)	790, 1264, 1796
Bse8I	GATNNNNATC	1 cut(s)	1557
BseAI	TCCGGA	2 cut(s)	898, 985
BseBI	CCWGG	2 cut(s)	107, 700
BseDI	CCNNGG	7 cut(s)	105, 118, 282, 480, 698, 699, 1367
BseGI	GGATG	4 cut(s)	1615, 1621, 1745, 2241
BseJI	GATNNNNATC	1 cut(s)	1557
BseLI	CCNNNNNNNGG	7 cut(s)	67, 282, 464, 585, 611, 752, 2182
BseMI	GCAATG	3 cut(s)	790, 1264, 1796
BseNI	ACTGG	3 cut(s)	790, 1444, 2241
BseRI	GAGGAG	3 cut(s)	210, 1436, 2198
BseSI	GKGCMC	3 cut(s)	579, 1463, 1707
BseX3I	CGGCCG	3 cut(s)	38, 497, 727
BseXI	GCAGC	4 cut(s)	362, 703, 1813, 2188
BseYI	CCCAGC	2 cut(s)	568, 809
BsgI	GTGCAG	1 cut(s)	2151
Bsh1236I	CGCG	1 cut(s)	92
Bsh1285I	CGRYCG	4 cut(s)	41, 500, 730, 753
BshNI	GGYRCC	5 cut(s)	233, 533, 601, 2000, 2037
BsiEI	CGRYCG	4 cut(s)	41, 500, 730, 753
BsiHKAI	GWGCWC	2 cut(s)	717, 2257
BsiHKCI	CYCGRG	2 cut(s)	481, 541
BslFI	GGGAC	1 cut(s)	531
BslI	CCNNNNNNNGG	7 cut(s)	67, 282, 464, 585, 611, 752, 2182
BsmAI	GTCTC	2 cut(s)	19, 2154
BsmFI	GGGAC	1 cut(s)	531
Bso31I	GGTCTC	1 cut(s)	2154
BsoBI	CYCGRG	2 cut(s)	481, 541
Bsp119I	TTCGAA	1 cut(s)	1984
Bsp120I	GGGCCC	2 cut(s)	575, 1459
Bsp1286I	GDGCHC	8 cut(s)	105, 579, 717, 771, 799, 1463, 1707, 2257
Bsp13I	TCCGGA	2 cut(s)	898, 985
Bsp1407I	TGTACA	1 cut(s)	823
Bsp19I	CCATGG	1 cut(s)	1367
BspEI	TCCGGA	2 cut(s)	898, 985
BspFNI	CGCG	1 cut(s)	92
BspHI	TCATGA	2 cut(s)	1549, 2269
BspMAI	CTGCAG	1 cut(s)	1279
BspPI	GGATC	4 cut(s)	186, 470, 597, 825
BspQI	GCTCTTC	1 cut(s)	837
BspT104I	TTCGAA	1 cut(s)	1984
BspT107I	GGYRCC	5 cut(s)	233, 533, 601, 2000, 2037
BspTNI	GGTCTC	1 cut(s)	2154
BsrBI	CCGCTC	3 cut(s)	496, 531, 607
BsrDI	GCAATG	3 cut(s)	790, 1264, 1796
BsrFI	RCCGGY	1 cut(s)	40
BsrGI	TGTACA	1 cut(s)	823
BsrI	ACTGG	3 cut(s)	790, 1444, 2241
BssAI	RCCGGY	1 cut(s)	40
BssECI	CCNNGG	7 cut(s)	105, 118, 282, 480, 698, 699, 1367
BssNI	GRCGYC	5 cut(s)	95, 387, 534, 602, 2277
BssSI	CACGAG	2 cut(s)	1472, 1822
BssT1I	CCWWGG	2 cut(s)	118, 1367
Bst2BI	CACGAG	2 cut(s)	1472, 1822
Bst2UI	CCWGG	2 cut(s)	107, 700
Bst4CI	ACNGT	7 cut(s)	322, 747, 926, 1010, 1252, 2087, 2284
Bst6I	CTCTTC	4 cut(s)	450, 620, 837, 1185
BstACI	GRCGYC	5 cut(s)	95, 387, 534, 602, 2277
BstAUI	TGTACA	1 cut(s)	823
BstBAI	YACGTR	2 cut(s)	461, 622
BstBI	TTCGAA	1 cut(s)	1984
BstC8I	GCNNGC	5 cut(s)	154, 470, 1173, 1762, 2257
BstDSI	CCRYGG	1 cut(s)	1367
BstENI	CCTNNNNNAGG	1 cut(s)	2180
BstF5I	GGATG	4 cut(s)	1615, 1621, 1745, 2241
BstFNI	CGCG	1 cut(s)	92
BstH2I	RGCGCY	4 cut(s)	309, 438, 537, 605
BstHHI	GCGC	4 cut(s)	308, 437, 536, 604
BstMAI	GTCTC	2 cut(s)	19, 2154
BstMCI	CGRYCG	4 cut(s)	41, 500, 730, 753
BstNI	CCWGG	2 cut(s)	107, 700
BstNSI	RCATGY	3 cut(s)	830, 1511, 2129
BstSCI	CCNGG	8 cut(s)	105, 247, 263, 281, 499, 572, 698, 1461
BstSFI	CTRYAG	1 cut(s)	1275
BstSLI	GKGCMC	3 cut(s)	579, 1463, 1707
BstUI	CGCG	1 cut(s)	92
BstV1I	GCAGC	4 cut(s)	362, 703, 1813, 2188
BstX2I	RGATCY	1 cut(s)	475
BstYI	RGATCY	1 cut(s)	475
BstZI	CGGCCG	3 cut(s)	38, 497, 727
BtgI	CCRYGG	1 cut(s)	1367
BtgZI	GCGATG	1 cut(s)	1303
BtsCI	GGATG	4 cut(s)	1615, 1621, 1745, 2241
BtsI	GCAGTG	3 cut(s)	1284, 1696, 1788
BtsIMutI	CAGTG	9 cut(s)	301, 354, 797, 1015, 1257, 1284, 1696, 1788, 1809
Cac8I	GCNNGC	5 cut(s)	154, 470, 1173, 1762, 2257
CaiI	CAGNNNCTG	1 cut(s)	1088
CciI	TCATGA	2 cut(s)	1549, 2269
CfoI	GCGC	4 cut(s)	308, 437, 536, 604
Cfr10I	RCCGGY	1 cut(s)	40
CseI	GACGC	3 cut(s)	84, 376, 1250
Csp6I	GTAC	5 cut(s)	420, 824, 1993, 2001, 2332
CviAII	CATG	9 cut(s)	827, 1349, 1368, 1508, 1550, 2019, 2126, 2228, 2270
CviQI	GTAC	5 cut(s)	420, 824, 1993, 2001, 2332
DinI	GGCGCC	2 cut(s)	535, 603
EaeI	YGGCCR	4 cut(s)	38, 497, 727, 1758
EagI	CGGCCG	3 cut(s)	38, 497, 727
Eam1104I	CTCTTC	4 cut(s)	450, 620, 837, 1185
EarI	CTCTTC	4 cut(s)	450, 620, 837, 1185
EciI	GGCGGA	1 cut(s)	646
Ecl136II	GAGCTC	1 cut(s)	2255
EclXI	CGGCCG	3 cut(s)	38, 497, 727
Eco130I	CCWWGG	2 cut(s)	118, 1367
Eco24I	GRGCYC	6 cut(s)	105, 579, 771, 799, 1463, 2257
Eco31I	GGTCTC	1 cut(s)	2154
Eco47I	GGWCC	5 cut(s)	51, 70, 485, 545, 1057
Eco47III	AGCGCT	1 cut(s)	307
Eco52I	CGGCCG	3 cut(s)	38, 497, 727
Eco53kI	GAGCTC	1 cut(s)	2255
Eco57I	CTGAAG	5 cut(s)	431, 929, 1017, 1065, 1209
Eco72I	CACGTG	1 cut(s)	461
Eco88I	CYCGRG	2 cut(s)	481, 541
EcoICRI	GAGCTC	1 cut(s)	2255
EcoNI	CCTNNNNNAGG	1 cut(s)	2180
EcoO109I	RGGNCCY	2 cut(s)	545, 1459
EcoRII	CCWGG	2 cut(s)	105, 698
EcoT14I	CCWWGG	2 cut(s)	118, 1367
EcoT38I	GRGCYC	6 cut(s)	105, 579, 771, 799, 1463, 2257
EgeI	GGCGCC	2 cut(s)	535, 603
EheI	GGCGCC	2 cut(s)	535, 603
ErhI	CCWWGG	2 cut(s)	118, 1367
FaeI	CATG	9 cut(s)	830, 1352, 1371, 1511, 1553, 2022, 2129, 2231, 2273
FalI	AAGNNNNNCTT	6 cut(s)	1182, 1214, 1678, 1710, 1893, 1925
FaqI	GGGAC	1 cut(s)	531
FatI	CATG	9 cut(s)	826, 1348, 1367, 1507, 1549, 2018, 2125, 2227, 2269
FauI	CCCGC	2 cut(s)	579, 2253
FbaI	TGATCA	3 cut(s)	976, 1813, 2059
FokI	GGATG	4 cut(s)	1622, 1628, 1732, 2228
FriOI	GRGCYC	6 cut(s)	105, 579, 771, 799, 1463, 2257
FspBI	CTAG	3 cut(s)	119, 401, 2055
GlaI	GCGC	4 cut(s)	307, 436, 535, 603
GsaI	CCCAGC	2 cut(s)	572, 813
GsuI	CTGGAG	1 cut(s)	311
HaeII	RGCGCY	4 cut(s)	309, 438, 537, 605
HgaI	GACGC	3 cut(s)	84, 376, 1250
HhaI	GCGC	4 cut(s)	308, 437, 536, 604
Hin1I	GRCGYC	5 cut(s)	95, 387, 534, 602, 2277
Hin1II	CATG	9 cut(s)	830, 1352, 1371, 1511, 1553, 2022, 2129, 2231, 2273
Hin6I	GCGC	4 cut(s)	306, 435, 534, 602
HinP1I	GCGC	4 cut(s)	306, 435, 534, 602
HphI	GGTGA	2 cut(s)	38, 1691
Hpy166II	GTNNAC	3 cut(s)	46, 824, 1809
Hpy8I	GTNNAC	3 cut(s)	46, 824, 1809
Hpy99I	CGWCG	8 cut(s)	83, 350, 427, 430, 584, 728, 751, 2279
HpyAV	CCTTC	8 cut(s)	204, 631, 652, 1331, 1447, 1670, 2037, 2297
HpyCH4III	ACNGT	7 cut(s)	322, 747, 926, 1010, 1252, 2087, 2284
HpyCH4IV	ACGT	8 cut(s)	81, 138, 422, 460, 621, 1127, 1967, 2277
HpyCH4V	TGCA	9 cut(s)	929, 1226, 1277, 1490, 1571, 1796, 1801, 2168, 2204
HpySE526I	ACGT	8 cut(s)	81, 138, 422, 460, 621, 1127, 1967, 2277
Hsp92I	GRCGYC	5 cut(s)	95, 387, 534, 602, 2277
Hsp92II	CATG	9 cut(s)	830, 1352, 1371, 1511, 1553, 2022, 2129, 2231, 2273
HspAI	GCGC	4 cut(s)	306, 435, 534, 602
KasI	GGCGCC	2 cut(s)	533, 601
KflI	GGGWCCC	1 cut(s)	545
Kpn2I	TCCGGA	2 cut(s)	898, 985
KpnI	GGTACC	1 cut(s)	2004
Ksp22I	TGATCA	3 cut(s)	976, 1813, 2059
LguI	GCTCTTC	1 cut(s)	837
LmnI	GCTCC	8 cut(s)	493, 528, 760, 901, 988, 1438, 2185, 2252
Lsp1109I	GCAGC	4 cut(s)	362, 703, 1813, 2188
LweI	GCATC	2 cut(s)	340, 883
MaeI	CTAG	3 cut(s)	119, 401, 2055
MaeII	ACGT	8 cut(s)	81, 138, 422, 460, 621, 1127, 1967, 2277
MaeIII	GTNAC	7 cut(s)	1010, 1123, 1246, 1510, 1840, 1915, 2278
MbiI	CCGCTC	3 cut(s)	496, 531, 607
MflI	RGATCY	1 cut(s)	475
MhlI	GDGCHC	8 cut(s)	105, 579, 717, 771, 799, 1463, 1707, 2257
MlsI	TGGCCA	1 cut(s)	1760
MluCI	AATT	9 cut(s)	673, 718, 902, 1166, 1307, 1358, 1630, 2134, 2231
MluNI	TGGCCA	1 cut(s)	1760
Mly113I	GGCGCC	2 cut(s)	534, 602
MlyI	GAGTC	5 cut(s)	21, 406, 1676, 1751, 2040
MmeI	TCCRAC	5 cut(s)	51, 156, 222, 1460, 1650
Mox20I	TGGCCA	1 cut(s)	1760
MroI	TCCGGA	2 cut(s)	898, 985
MroXI	GAANNNNTTC	1 cut(s)	1980
MscI	TGGCCA	1 cut(s)	1760
MseI	TTAA	4 cut(s)	882, 1601, 1911, 2069
MslI	CAYNNNNRTG	2 cut(s)	1866, 2285
Msp20I	TGGCCA	1 cut(s)	1760
MspA1I	CMGCKG	3 cut(s)	694, 1754, 1804
MspR9I	CCNGG	8 cut(s)	107, 249, 265, 283, 501, 574, 700, 1463
MvaI	CCWGG	2 cut(s)	107, 700
MvnI	CGCG	1 cut(s)	92
NarI	GGCGCC	2 cut(s)	534, 602
NciI	CCSGG	6 cut(s)	249, 265, 283, 501, 574, 1463
NcoI	CCATGG	1 cut(s)	1367
NlaIII	CATG	9 cut(s)	830, 1352, 1371, 1511, 1553, 2022, 2129, 2231, 2273
NmeAIII	GCCGAG	2 cut(s)	348, 578
NmuCI	GTSAC	4 cut(s)	1010, 1123, 1510, 2278
NspI	RCATGY	3 cut(s)	830, 1511, 2129
NspV	TTCGAA	1 cut(s)	1984
PagI	TCATGA	2 cut(s)	1549, 2269
PasI	CCCWGGG	1 cut(s)	699
PciI	ACATGT	3 cut(s)	826, 1507, 2125
PciSI	GCTCTTC	1 cut(s)	837
PcsI	WCGNNNNNNNCGW	2 cut(s)	96, 1520
PdmI	GAANNNNTTC	1 cut(s)	1980
PfeI	GAWTC	6 cut(s)	227, 1073, 1085, 1558, 1682, 2310
PflFI	GACNNNGTC	1 cut(s)	2276
Ple19I	CGATCG	1 cut(s)	753
PleI	GAGTC	5 cut(s)	20, 405, 1675, 1750, 2040
PluTI	GGCGCC	2 cut(s)	537, 605
PmaCI	CACGTG	1 cut(s)	461
PmlI	CACGTG	1 cut(s)	461
PpsI	GAGTC	5 cut(s)	20, 405, 1675, 1750, 2040
Ppu21I	YACGTR	2 cut(s)	461, 622
PpuMI	RGGWCCY	1 cut(s)	545
PscI	ACATGT	3 cut(s)	826, 1507, 2125
Psp124BI	GAGCTC	1 cut(s)	2257
Psp5II	RGGWCCY	1 cut(s)	545
Psp6I	CCWGG	2 cut(s)	105, 698
PspCI	CACGTG	1 cut(s)	461
PspFI	CCCAGC	2 cut(s)	568, 809
PspGI	CCWGG	2 cut(s)	105, 698
PspOMI	GGGCCC	2 cut(s)	575, 1459
PspPPI	RGGWCCY	1 cut(s)	545
PstI	CTGCAG	1 cut(s)	1279
PstNI	CAGNNNCTG	1 cut(s)	1088
PsuI	RGATCY	1 cut(s)	475
PsyI	GACNNNGTC	1 cut(s)	2276
PvuI	CGATCG	1 cut(s)	753
PvuII	CAGCTG	2 cut(s)	1754, 1804
RsaI	GTAC	5 cut(s)	421, 825, 1994, 2002, 2333
RsaNI	GTAC	5 cut(s)	420, 824, 1993, 2001, 2332
RseI	CAYNNNNRTG	2 cut(s)	1866, 2285
SacI	GAGCTC	1 cut(s)	2257
SapI	GCTCTTC	1 cut(s)	837
SaqAI	TTAA	4 cut(s)	882, 1601, 1911, 2069
SchI	GAGTC	5 cut(s)	21, 406, 1676, 1751, 2040
ScrFI	CCNGG	8 cut(s)	107, 249, 265, 283, 501, 574, 700, 1463
SduI	GDGCHC	8 cut(s)	105, 579, 717, 771, 799, 1463, 1707, 2257
SfaNI	GCATC	2 cut(s)	340, 883
SfcI	CTRYAG	1 cut(s)	1275
SfoI	GGCGCC	2 cut(s)	535, 603
SfuI	TTCGAA	1 cut(s)	1984
SinI	GGWCC	5 cut(s)	51, 70, 485, 545, 1057
SmiMI	CAYNNNNRTG	2 cut(s)	1866, 2285
SmlI	CTYRAG	1 cut(s)	1776
SmoI	CTYRAG	1 cut(s)	1776
Sse9I	AATT	9 cut(s)	673, 718, 902, 1166, 1307, 1358, 1630, 2134, 2231
SspDI	GGCGCC	2 cut(s)	533, 601
SspI	AATATT	1 cut(s)	340
SspMI	CTAG	3 cut(s)	119, 401, 2055
SstI	GAGCTC	1 cut(s)	2257
StyD4I	CCNGG	8 cut(s)	105, 247, 263, 281, 499, 572, 698, 1461
StyI	CCWWGG	2 cut(s)	118, 1367
TaaI	ACNGT	7 cut(s)	322, 747, 926, 1010, 1252, 2087, 2284
TaiI	ACGT	8 cut(s)	84, 141, 425, 463, 624, 1130, 1970, 2280
TaqI	TCGA	5 cut(s)	552, 749, 1076, 1304, 1984
TaqII	GACCGA	1 cut(s)	1553
TasI	AATT	9 cut(s)	673, 718, 902, 1166, 1307, 1358, 1630, 2134, 2231
TatI	WGTACW	2 cut(s)	823, 1992
TfiI	GAWTC	6 cut(s)	227, 1073, 1085, 1558, 1682, 2310
Tru1I	TTAA	4 cut(s)	882, 1601, 1911, 2069
Tru9I	TTAA	4 cut(s)	882, 1601, 1911, 2069
TscAI	CASTG	9 cut(s)	301, 361, 797, 1015, 1257, 1284, 1696, 1788, 1816
TseFI	GTSAC	4 cut(s)	1010, 1123, 1510, 2278
TseI	GCWGC	4 cut(s)	375, 691, 1801, 2201
Tsp45I	GTSAC	4 cut(s)	1010, 1123, 1510, 2278
TspDTI	ATGAA	7 cut(s)	175, 1086, 1466, 1538, 1643, 1872, 2244
TspGWI	ACGGA	3 cut(s)	280, 1529, 2186
TspRI	CASTG	9 cut(s)	301, 361, 797, 1015, 1257, 1284, 1696, 1788, 1816
Tth111I	GACNNNGTC	1 cut(s)	2276
VpaK11BI	GGWCC	5 cut(s)	51, 70, 485, 545, 1057
XagI	CCTNNNNNAGG	1 cut(s)	2180
XapI	RAATTY	4 cut(s)	673, 902, 1630, 2134
XceI	RCATGY	3 cut(s)	830, 1511, 2129
XcmI	CCANNNNNNNNNTGG	1 cut(s)	797
XmaJI	CCTAGG	1 cut(s)	118
XmnI	GAANNNNTTC	1 cut(s)	1980
XspI	CTAG	3 cut(s)	119, 401, 2055
ZraI	GACGTC	1 cut(s)	2278

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.