Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000821.1

Orthogroup ID

OG0011099

Physical Location & Seq

Genomic Coordinates Forward (+)

22081 .. 27048

Gene Structure 4968 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000821.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2361 bp

atgggaagtggagtctccaccctctcctcttgcttcagatcggctcacccaacccccgaccacaacgacgtcgtcttctccgcctccgagcccttggacgaaaccctaggccattctttctgctatgtaaggtcctccgctcgcttcctctcccccactcagtcggatcgctttctttccccttccaactccctccggttctcgccgccgcacgaggcccgcgcccggcccggcctccccgagaccgggttcaaggccatctccggcgcctccgtcagtgccaacagctccactccccggactgtcctccagcttgacaatatttacgacgatgccactgagagtgtgaacggtggcttcggcggcggagtgaggggcagcatcgtcaatggtttcgagagtacgtcgtcgtttagtgccctgcctctccagccggtgccgcggggaggcgagccctccggcccaatggagcgcggcggcttctttctctccggtccgatagagcgcggggcgctctccggtccgctcgactcgaacccgcccggaccggacggcgatgtccacttctcggcgccgctcggcggtctttacgccaagaagaggcggaagaagggcatttccgggatccggaaggcgttttaccgcaacttcgagaagaagcaacggccctgggtggtgccggtgctcaataatttcgtcggccggaaggaggggccaccggcgaacggggaggagcacgagacggcgaggaataatgagaccaatgtccagtgggctctcggcaaagccggggaggaccgggtacatgtggtggtttcggaggagcaagggtggctctttgttgggatttatgatgggtttaacggccctgatgcgccggagttcttgatggggaatctttaccgtgctttttacaatgagcttcagggcttgttttgggaggttgatgatgatgaggaagcccaagaaggcagtcatgcaaacccactagatgttgcccaacaagttaatgctactactagtactagctcaccaaatcttgcttcagagggtgaggctaaaattgatggggaagtttcggatgctggaaatgggtccaattcgaattctgacccctcgggggcaggtgatcggacaaagagagtgacatttcaaccggaagggaggaggcgccggctgtgggagttactccgcgaggctgaggctgaagaagggcttgacctttcaggttcagagaggtttgcgttttctgtggatgatgctctcactgtcagcaatgctggttcggctggttctgctgagagtaggaggtggcttttgttgtcgaaattgaagcagggattatctaagcataaggatggccagggtcctggtaagaagctgtttccgtggaggtttggtttggaggataaggagaaggttgaggttgagaatagagtggaggagaggtctgctccgcctggtaggagaaggaaggagggtccggtcgatcatgaattggtgttgagggcattgtcaagggctttacaggtgacggagcttgcttatttggatatgactgataaggtcattgatacaaatccagagcttgctttgatggggtcgtgtttgttggttgtgctaatgagggatgaagatgtgtatgtgatgaatgtgggggatagtagggcgattgttgcacattatgagccggaggaagttggtacaagcgtgaaatcaagggggcagaaggacaatgggttgagtgctgaggacataactgaggcatcctcagctgtgggcgatgaggctcctactcaaccaatgagattggctgcattgcagctgtccactgatcacagcacaagcattgaagaagaagtgataagaatcaagaatgaacacccagatgacaaaaactgtattctcaatgatagagtgaaaggtcgtcttaaggttaccagagcgtttggggcaggctttctgaaacagcccaagttcaatgctccgctattggaaatgtttcggaatgagtacattggtaccgcaccatacatctcatgtttgccttctcttcgccaccacagactctgccctagtgatcagtttttgattctttcatctgacggtctgtatcagtatctaagcaatcaggaagttgtttctcatgtggagaattttatggagaagtttcccgagggagaccctgcacaacacctgatagaggagcttcttttccgtgctgcaaagaaagccggaatggatttccatgaattactggacatccctcaaggagatcgcaggaagtatcacgatgatgttactgttatggtcatatcacttgaaggaagaatttggaagtcatcaggaaagtacctttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005623 GO:0005886 GO:0006355 GO:0008150 GO:0008289 GO:0009653 GO:0009826 GO:0009888 GO:0009889 GO:0009933 GO:0009987 GO:0010073 GO:0010074 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0019827 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043167 GO:0043168 GO:0044464 GO:0048507 GO:0048532 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0060560 GO:0065007 GO:0071840 GO:0071944 GO:0080090 GO:0098727 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C

Protein Analysis

786

Amino Acids

86.26

Weight (kDa)

5.39

Isoelectric Point (pI)

45.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35350
fragaria_vesca	FvH4_5g21630 FvH4_5g21630
malus_domestica	MD06G1031300.v1.1 MD16G1277400.v1.1
prunus_persica	Prupe.5G040900_v2.0.a1
pyrus_communis	pycom06g02610 pycom16g24670
rosa_chinensis	RchiOBHm_Chr7g0209091
rosa_laevigata	RLG00000003168
rosa_multiflora	Rmu_co8472153.1_g000001 Rmu_sc0000821.1_g000009 Rmu_sc0012788.1_g000001
rosa_roxburghii	Rroxscaffold_3G00249760
rosa_rugosa	Rorug07G0109000
rosa_samantha	Rh7AG243400 Rh7BG238500 Rh7CG258600 Rh7DG250400
rosa_wichuraiana	Rw7G020630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1115
AasI	GACNNNNNNGTC	1 cut(s)	557
AatII	GACGTC	1 cut(s)	72
Acc36I	ACCTGC	1 cut(s)	1115
Acc65I	GGTACC	1 cut(s)	2021
AccB1I	GGYRCC	6 cut(s)	266, 436, 571, 676, 1170, 2021
AccBSI	CCGCTC	3 cut(s)	140, 526, 577
AccII	CGCG	5 cut(s)	222, 442, 474, 507, 1194
AccIII	TCCGGA	1 cut(s)	627
AclWI	GGATC	3 cut(s)	174, 619, 632
AcoI	YGGCCR	2 cut(s)	700, 1360
AcsI	RAATTY	3 cut(s)	1105, 2155, 2331
AcuI	CTGAAG	4 cut(s)	19, 908, 1029, 1227
AcyI	GRCGYC	4 cut(s)	69, 267, 572, 1171
AfaI	GTAC	7 cut(s)	403, 804, 1024, 1705, 2015, 2023, 2354
AflII	CTTAAG	1 cut(s)	1931
AflIII	ACRYGT	1 cut(s)	805
AgsI	TTSAA	6 cut(s)	253, 1154, 1333, 1853, 1981, 2324
AhlI	ACTAGT	1 cut(s)	1019
AjnI	CCWGG	4 cut(s)	668, 1362, 1369, 1459
AjuI	GAANNNNNNNTTGG	2 cut(s)	1027, 1059
Alw21I	GWGCWC	2 cut(s)	687, 738
Alw26I	GTCTC	5 cut(s)	19, 236, 734, 752, 2175
AlwI	GGATC	3 cut(s)	174, 619, 632
AlwNI	CAGNNNCTG	1 cut(s)	2070
Ama87I	CYCGRG	3 cut(s)	239, 1117, 2174
Aor13HI	TCCGGA	1 cut(s)	627
ApeKI	GCWGC	4 cut(s)	378, 1814, 1822, 2222
ApoI	RAATTY	3 cut(s)	1105, 2155, 2331
Asp700I	GAANNNNTTC	1 cut(s)	2001
Asp718I	GGTACC	1 cut(s)	2021
AspA2I	CCTAGG	1 cut(s)	106
AspLEI	GCGC	8 cut(s)	224, 269, 474, 507, 514, 574, 877, 1173
AsuC2I	CCSGG	8 cut(s)	226, 231, 247, 298, 543, 622, 790, 800
AsuHPI	GGTGA	5 cut(s)	38, 1023, 1064, 1139, 1543
AsuII	TTCGAA	1 cut(s)	1103
AvaI	CYCGRG	3 cut(s)	239, 1117, 2174
AvaII	GGWCC	8 cut(s)	132, 494, 521, 545, 796, 1095, 1367, 1481
AvrII	CCTAGG	1 cut(s)	106
BaeGI	GKGCMC	1 cut(s)	421
BaeI	ACNNNNGTAYC	4 cut(s)	1695, 1728, 2005, 2038
BalI	TGGCCA	1 cut(s)	1362
BamHI	GGATCC	1 cut(s)	624
BanI	GGYRCC	6 cut(s)	266, 436, 571, 676, 1170, 2021
BanII	GRGCYC	3 cut(s)	93, 456, 778
BarI	GAAGNNNNNNTAC	2 cut(s)	623, 655
BauI	CACGAG	2 cut(s)	212, 737
BbsI	GAAGAC	1 cut(s)	67
Bbv12I	GWGCWC	2 cut(s)	687, 738
BbvCI	CCTCAGC	3 cut(s)	1200, 1749, 1771
BbvI	GCAGC	4 cut(s)	390, 1801, 1834, 2209
BccI	CCATC	6 cut(s)	266, 848, 883, 1061, 1352, 1591
BceAI	ACGGC	4 cut(s)	568, 680, 759, 880
BciT130I	CCWGG	4 cut(s)	670, 1364, 1371, 1461
BclI	TGATCA	2 cut(s)	1834, 2080
BcnI	CCSGG	8 cut(s)	226, 231, 247, 298, 543, 622, 790, 800
BcoDI	GTCTC	5 cut(s)	19, 236, 734, 752, 2175
BcuI	ACTAGT	1 cut(s)	1019
BfaI	CTAG	5 cut(s)	107, 989, 1020, 1026, 2076
BfoI	RGCGCY	4 cut(s)	270, 515, 575, 1174
BfrI	CTTAAG	1 cut(s)	1931
BfuAI	ACCTGC	1 cut(s)	1115
BlnI	CCTAGG	1 cut(s)	106
BmcAI	AGTACT	1 cut(s)	1024
Bme18I	GGWCC	8 cut(s)	132, 494, 521, 545, 796, 1095, 1367, 1481
BmeT110I	CYCGRG	3 cut(s)	239, 1117, 2174
BmsI	GCATC	6 cut(s)	322, 390, 862, 1072, 1249, 1775
BoxI	GACNNNNGTC	1 cut(s)	764
BpiI	GAAGAC	1 cut(s)	67
BplI	GAGNNNNNCTC	4 cut(s)	1438, 1470, 1754, 1786
BpmI	CTGGAG	2 cut(s)	293, 413
Bpu10I	CCTNAGC	3 cut(s)	1200, 1749, 1771
Bpu14I	TTCGAA	1 cut(s)	1103
BpuEI	CTTGAG	1 cut(s)	2253
BpuMI	CCSGG	8 cut(s)	226, 231, 247, 298, 543, 622, 790, 800
BsaBI	GATNNNNATC	2 cut(s)	1578, 1868
BsaHI	GRCGYC	4 cut(s)	69, 267, 572, 1171
BsaI	GGTCTC	3 cut(s)	236, 752, 2175
BsaWI	WCCGGW	7 cut(s)	195, 491, 518, 547, 627, 1156, 1483
BsaXI	ACNNNNNCTCC	6 cut(s)	815, 845, 1384, 1414, 1433, 1463
Bse118I	RCCGGY	4 cut(s)	433, 679, 718, 1173
Bse1I	ACTGG	2 cut(s)	769, 2262
Bse3DI	GCAATG	2 cut(s)	1282, 1817
Bse8I	GATNNNNATC	2 cut(s)	1578, 1868
BseAI	TCCGGA	1 cut(s)	627
BseBI	CCWGG	4 cut(s)	670, 1364, 1371, 1461
BseGI	GGATG	6 cut(s)	1087, 1261, 1363, 1636, 1766, 2262
BseJI	GATNNNNATC	2 cut(s)	1578, 1868
BseMI	GCAATG	2 cut(s)	1282, 1817
BseMII	CTCAG	7 cut(s)	173, 330, 1191, 1290, 1740, 1752, 1785
BseNI	ACTGG	2 cut(s)	769, 2262
BseRI	GAGGAG	6 cut(s)	16, 746, 836, 1180, 1457, 2219
BseSI	GKGCMC	1 cut(s)	421
BseX3I	CGGCCG	1 cut(s)	700
BseXI	GCAGC	4 cut(s)	390, 1801, 1834, 2209
BsgI	GTGCAG	1 cut(s)	2172
Bsh1236I	CGCG	5 cut(s)	222, 442, 474, 507, 1194
Bsh1285I	CGRYCG	2 cut(s)	703, 1488
BshNI	GGYRCC	6 cut(s)	266, 436, 571, 676, 1170, 2021
BsiEI	CGRYCG	2 cut(s)	703, 1488
BsiHKAI	GWGCWC	2 cut(s)	687, 738
BsiHKCI	CYCGRG	3 cut(s)	239, 1117, 2174
BsmAI	GTCTC	5 cut(s)	19, 236, 734, 752, 2175
BsmBI	CGTCTC	1 cut(s)	734
Bso31I	GGTCTC	3 cut(s)	236, 752, 2175
BsoBI	CYCGRG	3 cut(s)	239, 1117, 2174
Bsp119I	TTCGAA	1 cut(s)	1103
Bsp1286I	GDGCHC	6 cut(s)	93, 421, 456, 687, 738, 778
Bsp13I	TCCGGA	1 cut(s)	627
Bsp143I	GATC	8 cut(s)	38, 166, 624, 1129, 1489, 1834, 2080, 2275
BspCNI	CTCAG	7 cut(s)	172, 331, 1192, 1291, 1741, 1753, 1784
BspEI	TCCGGA	1 cut(s)	627
BspFNI	CGCG	5 cut(s)	222, 442, 474, 507, 1194
BspHI	TCATGA	1 cut(s)	1492
BspMI	ACCTGC	1 cut(s)	1115
BspPI	GGATC	3 cut(s)	174, 619, 632
BspT104I	TTCGAA	1 cut(s)	1103
BspT107I	GGYRCC	6 cut(s)	266, 436, 571, 676, 1170, 2021
BspTI	CTTAAG	1 cut(s)	1931
BspTNI	GGTCTC	3 cut(s)	236, 752, 2175
BsrBI	CCGCTC	3 cut(s)	140, 526, 577
BsrDI	GCAATG	2 cut(s)	1282, 1817
BsrFI	RCCGGY	4 cut(s)	433, 679, 718, 1173
BsrI	ACTGG	2 cut(s)	769, 2262
BssAI	RCCGGY	4 cut(s)	433, 679, 718, 1173
BssMI	GATC	8 cut(s)	38, 166, 624, 1129, 1489, 1834, 2080, 2275
BssNI	GRCGYC	4 cut(s)	69, 267, 572, 1171
BssSI	CACGAG	2 cut(s)	212, 737
BssT1I	CCWWGG	2 cut(s)	93, 106
Bst2BI	CACGAG	2 cut(s)	212, 737
Bst2UI	CCWGG	4 cut(s)	670, 1364, 1371, 1461
Bst4CI	ACNGT	7 cut(s)	304, 353, 905, 1270, 1901, 2108, 2305
Bst6I	CTCTTC	2 cut(s)	593, 2058
BstACI	GRCGYC	4 cut(s)	69, 267, 572, 1171
BstAFI	CTTAAG	1 cut(s)	1931
BstBI	TTCGAA	1 cut(s)	1103
BstC8I	GCNNGC	7 cut(s)	142, 220, 452, 1175, 1542, 1590, 1957
BstDEI	CTNAG	9 cut(s)	159, 339, 1200, 1299, 1347, 1749, 1761, 1771, 2123
BstDSI	CCRYGG	2 cut(s)	440, 1388
BstEII	GGTNACC	1 cut(s)	1936
BstENI	CCTNNNNNAGG	1 cut(s)	2201
BstF5I	GGATG	6 cut(s)	1087, 1261, 1363, 1636, 1766, 2262
BstFNI	CGCG	5 cut(s)	222, 442, 474, 507, 1194
BstH2I	RGCGCY	4 cut(s)	270, 515, 575, 1174
BstHHI	GCGC	8 cut(s)	224, 269, 474, 507, 514, 574, 877, 1173
BstKTI	GATC	8 cut(s)	41, 169, 627, 1132, 1492, 1837, 2083, 2278
BstMAI	GTCTC	5 cut(s)	19, 236, 734, 752, 2175
BstMBI	GATC	8 cut(s)	38, 166, 624, 1129, 1489, 1834, 2080, 2275
BstMCI	CGRYCG	2 cut(s)	703, 1488
BstNI	CCWGG	4 cut(s)	670, 1364, 1371, 1461
BstNSI	RCATGY	1 cut(s)	809
BstPAI	GACNNNNGTC	1 cut(s)	764
BstPI	GGTNACC	1 cut(s)	1936
BstSLI	GKGCMC	1 cut(s)	421
BstUI	CGCG	5 cut(s)	222, 442, 474, 507, 1194
BstV1I	GCAGC	4 cut(s)	390, 1801, 1834, 2209
BstV2I	GAAGAC	1 cut(s)	67
BstX2I	RGATCY	1 cut(s)	624
BstXI	CCANNNNNNTGG	1 cut(s)	1370
BstYI	RGATCY	1 cut(s)	624
BstZI	CGGCCG	1 cut(s)	700
BtgI	CCRYGG	2 cut(s)	440, 1388
BtgZI	GCGATG	2 cut(s)	570, 1797
BtsCI	GGATG	6 cut(s)	1087, 1261, 1363, 1636, 1766, 2262
BtsIMutI	CAGTG	5 cut(s)	283, 336, 776, 1266, 1830
BveI	ACCTGC	1 cut(s)	1115
Cac8I	GCNNGC	7 cut(s)	142, 220, 452, 1175, 1542, 1590, 1957
CaiI	CAGNNNCTG	1 cut(s)	2070
CciI	TCATGA	1 cut(s)	1492
CfoI	GCGC	8 cut(s)	224, 269, 474, 507, 514, 574, 877, 1173
Cfr10I	RCCGGY	4 cut(s)	433, 679, 718, 1173
Cfr42I	CCGCGG	1 cut(s)	443
CpoI	CGGWCCG	3 cut(s)	494, 521, 545
Csp6I	GTAC	7 cut(s)	402, 803, 1023, 1704, 2014, 2022, 2353
CspI	CGGWCCG	3 cut(s)	494, 521, 545
CviAII	CATG	6 cut(s)	806, 977, 1493, 2040, 2147, 2249
CviQI	GTAC	7 cut(s)	402, 803, 1023, 1704, 2014, 2022, 2353
DdeI	CTNAG	9 cut(s)	159, 339, 1200, 1299, 1347, 1749, 1761, 1771, 2123
DinI	GGCGCC	3 cut(s)	268, 573, 1172
DpnI	GATC	8 cut(s)	40, 168, 626, 1131, 1491, 1836, 2082, 2277
DpnII	GATC	8 cut(s)	38, 166, 624, 1129, 1489, 1834, 2080, 2275
DrdI	GACNNNNNNGTC	1 cut(s)	557
DseDI	GACNNNNNNGTC	1 cut(s)	557
EaeI	YGGCCR	2 cut(s)	700, 1360
EagI	CGGCCG	1 cut(s)	700
Eam1104I	CTCTTC	2 cut(s)	593, 2058
EarI	CTCTTC	2 cut(s)	593, 2058
EciI	GGCGGA	4 cut(s)	70, 381, 619, 1446
EclXI	CGGCCG	1 cut(s)	700
Eco130I	CCWWGG	2 cut(s)	93, 106
Eco24I	GRGCYC	3 cut(s)	93, 456, 778
Eco31I	GGTCTC	3 cut(s)	236, 752, 2175
Eco47I	GGWCC	8 cut(s)	132, 494, 521, 545, 796, 1095, 1367, 1481
Eco52I	CGGCCG	1 cut(s)	700
Eco57I	CTGAAG	4 cut(s)	19, 908, 1029, 1227
Eco88I	CYCGRG	3 cut(s)	239, 1117, 2174
Eco91I	GGTNACC	1 cut(s)	1936
EcoNI	CCTNNNNNAGG	1 cut(s)	2201
EcoO109I	RGGNCCY	2 cut(s)	132, 1367
EcoO65I	GGTNACC	1 cut(s)	1936
EcoRI	GAATTC	1 cut(s)	1105
EcoRII	CCWGG	4 cut(s)	668, 1362, 1369, 1459
EcoT14I	CCWWGG	2 cut(s)	93, 106
EcoT38I	GRGCYC	3 cut(s)	93, 456, 778
EgeI	GGCGCC	3 cut(s)	268, 573, 1172
EheI	GGCGCC	3 cut(s)	268, 573, 1172
ErhI	CCWWGG	2 cut(s)	93, 106
Esp3I	CGTCTC	1 cut(s)	734
FaeI	CATG	6 cut(s)	809, 980, 1496, 2043, 2150, 2252
FalI	AAGNNNNNCTT	4 cut(s)	1200, 1232, 1914, 1946
FatI	CATG	6 cut(s)	805, 976, 1492, 2039, 2146, 2248
FauI	CCCGC	4 cut(s)	227, 435, 500, 546
FbaI	TGATCA	2 cut(s)	1834, 2080
FokI	GGATG	6 cut(s)	1094, 1268, 1370, 1643, 1753, 2249
FriOI	GRGCYC	3 cut(s)	93, 456, 778
FspBI	CTAG	5 cut(s)	107, 989, 1020, 1026, 2076
GlaI	GCGC	8 cut(s)	223, 268, 473, 506, 513, 573, 876, 1172
GsuI	CTGGAG	2 cut(s)	293, 413
HaeII	RGCGCY	4 cut(s)	270, 515, 575, 1174
HhaI	GCGC	8 cut(s)	224, 269, 474, 507, 514, 574, 877, 1173
Hin1I	GRCGYC	4 cut(s)	69, 267, 572, 1171
Hin1II	CATG	6 cut(s)	809, 980, 1496, 2043, 2150, 2252
Hin6I	GCGC	8 cut(s)	222, 267, 472, 505, 512, 572, 875, 1171
HinP1I	GCGC	8 cut(s)	222, 267, 472, 505, 512, 572, 875, 1171
HinfI	GANTC	6 cut(s)	12, 530, 895, 1869, 2067, 2092
HphI	GGTGA	5 cut(s)	38, 1023, 1064, 1139, 1543
Hpy166II	GTNNAC	3 cut(s)	349, 562, 1830
Hpy8I	GTNNAC	3 cut(s)	349, 562, 1830
Hpy99I	CGWCG	6 cut(s)	71, 74, 332, 409, 412, 701
HpyCH4III	ACNGT	7 cut(s)	304, 353, 905, 1270, 1901, 2108, 2305
HpyCH4IV	ACGT	2 cut(s)	69, 404
HpyCH4V	TGCA	6 cut(s)	980, 1679, 1817, 1822, 2189, 2225
HpyF3I	CTNAG	9 cut(s)	159, 339, 1200, 1299, 1347, 1749, 1761, 1771, 2123
HpySE526I	ACGT	2 cut(s)	69, 404
Hsp92I	GRCGYC	4 cut(s)	69, 267, 572, 1171
Hsp92II	CATG	6 cut(s)	809, 980, 1496, 2043, 2150, 2252
HspAI	GCGC	8 cut(s)	222, 267, 472, 505, 512, 572, 875, 1171
KasI	GGCGCC	3 cut(s)	266, 571, 1170
Kpn2I	TCCGGA	1 cut(s)	627
KpnI	GGTACC	1 cut(s)	2025
KroI	GCCGGC	1 cut(s)	1173
KroNI	GCCGGC	1 cut(s)	1175
Ksp22I	TGATCA	2 cut(s)	1834, 2080
KspI	CCGCGG	1 cut(s)	443
Kzo9I	GATC	8 cut(s)	38, 166, 624, 1129, 1489, 1834, 2080, 2275
LmnI	GCTCC	9 cut(s)	293, 469, 733, 823, 1459, 1537, 1795, 1990, 2206
Lsp1109I	GCAGC	4 cut(s)	390, 1801, 1834, 2209
LweI	GCATC	6 cut(s)	322, 390, 862, 1072, 1249, 1775
MaeI	CTAG	5 cut(s)	107, 989, 1020, 1026, 2076
MaeII	ACGT	2 cut(s)	69, 404
MaeIII	GTNAC	5 cut(s)	1144, 1185, 1531, 1936, 2299
MalI	GATC	8 cut(s)	40, 168, 626, 1131, 1491, 1836, 2082, 2277
MbiI	CCGCTC	3 cut(s)	140, 526, 577
MboI	GATC	8 cut(s)	38, 166, 624, 1129, 1489, 1834, 2080, 2275
MflI	RGATCY	1 cut(s)	624
MhlI	GDGCHC	6 cut(s)	93, 421, 456, 687, 738, 778
MlsI	TGGCCA	1 cut(s)	1362
MluCI	AATT	9 cut(s)	691, 1062, 1099, 1105, 1328, 1496, 2155, 2252, 2331
MluNI	TGGCCA	1 cut(s)	1362
Mly113I	GGCGCC	3 cut(s)	267, 572, 1171
MlyI	GAGTC	3 cut(s)	21, 524, 2061
MmeI	TCCRAC	2 cut(s)	144, 210
Mox20I	TGGCCA	1 cut(s)	1362
MroI	TCCGGA	1 cut(s)	627
MroNI	GCCGGC	1 cut(s)	1173
MroXI	GAANNNNTTC	1 cut(s)	2001
MscI	TGGCCA	1 cut(s)	1362
MseI	TTAA	3 cut(s)	861, 1008, 1932
MslI	CAYNNNNRTG	3 cut(s)	1356, 1887, 2295
Msp20I	TGGCCA	1 cut(s)	1362
MspA1I	CMGCKG	3 cut(s)	442, 1775, 1825
MspCI	CTTAAG	1 cut(s)	1931
MvaI	CCWGG	4 cut(s)	670, 1364, 1371, 1461
MvnI	CGCG	5 cut(s)	222, 442, 474, 507, 1194
NaeI	GCCGGC	1 cut(s)	1175
NarI	GGCGCC	3 cut(s)	267, 572, 1171
NciI	CCSGG	8 cut(s)	226, 231, 247, 298, 543, 622, 790, 800
NdeII	GATC	8 cut(s)	38, 166, 624, 1129, 1489, 1834, 2080, 2275
NgoMIV	GCCGGC	1 cut(s)	1173
NlaIII	CATG	6 cut(s)	809, 980, 1496, 2043, 2150, 2252
NmeAIII	GCCGAG	3 cut(s)	548, 558, 759
NmuCI	GTSAC	2 cut(s)	1144, 1531
NspI	RCATGY	1 cut(s)	809
NspV	TTCGAA	1 cut(s)	1103
PagI	TCATGA	1 cut(s)	1492
PaqCI	CACCTGC	1 cut(s)	1115
PasI	CCCWGGG	1 cut(s)	669
PciI	ACATGT	1 cut(s)	805
PdiI	GCCGGC	1 cut(s)	1175
PdmI	GAANNNNTTC	1 cut(s)	2001
PfeI	GAWTC	3 cut(s)	895, 1869, 2092
PflFI	GACNNNGTC	1 cut(s)	71
PfoI	TCCNGGA	1 cut(s)	620
PleI	GAGTC	3 cut(s)	20, 524, 2061
PluTI	GGCGCC	3 cut(s)	270, 575, 1174
PpsI	GAGTC	3 cut(s)	20, 524, 2061
PpuMI	RGGWCCY	2 cut(s)	132, 1367
PscI	ACATGT	1 cut(s)	805
PshAI	GACNNNNGTC	1 cut(s)	764
Psp5II	RGGWCCY	2 cut(s)	132, 1367
Psp6I	CCWGG	4 cut(s)	668, 1362, 1369, 1459
PspEI	GGTNACC	1 cut(s)	1936
PspGI	CCWGG	4 cut(s)	668, 1362, 1369, 1459
PspPPI	RGGWCCY	2 cut(s)	132, 1367
PstNI	CAGNNNCTG	1 cut(s)	2070
PsuI	RGATCY	1 cut(s)	624
PsyI	GACNNNGTC	1 cut(s)	71
PvuII	CAGCTG	2 cut(s)	1775, 1825
RsaI	GTAC	7 cut(s)	403, 804, 1024, 1705, 2015, 2023, 2354
RsaNI	GTAC	7 cut(s)	402, 803, 1023, 1704, 2014, 2022, 2353
RseI	CAYNNNNRTG	3 cut(s)	1356, 1887, 2295
Rsr2I	CGGWCCG	3 cut(s)	494, 521, 545
RsrII	CGGWCCG	3 cut(s)	494, 521, 545
SacII	CCGCGG	1 cut(s)	443
SaqAI	TTAA	3 cut(s)	861, 1008, 1932
Sau3AI	GATC	8 cut(s)	38, 166, 624, 1129, 1489, 1834, 2080, 2275
ScaI	AGTACT	1 cut(s)	1024
SchI	GAGTC	3 cut(s)	21, 524, 2061
SduI	GDGCHC	6 cut(s)	93, 421, 456, 687, 738, 778
SfaNI	GCATC	6 cut(s)	322, 390, 862, 1072, 1249, 1775
SfoI	GGCGCC	3 cut(s)	268, 573, 1172
Sfr303I	CCGCGG	1 cut(s)	443
SfuI	TTCGAA	1 cut(s)	1103
SgrAI	CRCCGGYG	1 cut(s)	718
SgrBI	CCGCGG	1 cut(s)	443
SinI	GGWCC	8 cut(s)	132, 494, 521, 545, 796, 1095, 1367, 1481
SmiMI	CAYNNNNRTG	3 cut(s)	1356, 1887, 2295
SmlI	CTYRAG	2 cut(s)	1931, 2268
SmoI	CTYRAG	2 cut(s)	1931, 2268
SpeI	ACTAGT	1 cut(s)	1019
Sse9I	AATT	9 cut(s)	691, 1062, 1099, 1105, 1328, 1496, 2155, 2252, 2331
SspDI	GGCGCC	3 cut(s)	266, 571, 1170
SspI	AATATT	1 cut(s)	322
SspMI	CTAG	5 cut(s)	107, 989, 1020, 1026, 2076
StyI	CCWWGG	2 cut(s)	93, 106
TaaI	ACNGT	7 cut(s)	304, 353, 905, 1270, 1901, 2108, 2305
TaiI	ACGT	2 cut(s)	72, 407
TaqI	TCGA	7 cut(s)	396, 528, 533, 651, 1103, 1325, 1488
TasI	AATT	9 cut(s)	691, 1062, 1099, 1105, 1328, 1496, 2155, 2252, 2331
TatI	WGTACW	2 cut(s)	1022, 2013
TauI	GCSGC	7 cut(s)	208, 211, 366, 442, 477, 480, 577
TfiI	GAWTC	3 cut(s)	895, 1869, 2092
Tru1I	TTAA	3 cut(s)	861, 1008, 1932
Tru9I	TTAA	3 cut(s)	861, 1008, 1932
TscAI	CASTG	5 cut(s)	283, 343, 776, 1273, 1837
TseFI	GTSAC	2 cut(s)	1144, 1531
TseI	GCWGC	4 cut(s)	378, 1814, 1822, 2222
Tsp45I	GTSAC	2 cut(s)	1144, 1531
TspDTI	ATGAA	6 cut(s)	1509, 1647, 1664, 1893, 2088, 2265
TspGWI	ACGGA	4 cut(s)	262, 1377, 1550, 2207
TspRI	CASTG	5 cut(s)	283, 343, 776, 1273, 1837
Tth111I	GACNNNGTC	1 cut(s)	71
Vha464I	CTTAAG	1 cut(s)	1931
VpaK11BI	GGWCC	8 cut(s)	132, 494, 521, 545, 796, 1095, 1367, 1481
XagI	CCTNNNNNAGG	1 cut(s)	2201
XapI	RAATTY	3 cut(s)	1105, 2155, 2331
XceI	RCATGY	1 cut(s)	809
XmaJI	CCTAGG	1 cut(s)	106
XmnI	GAANNNNTTC	1 cut(s)	2001
XspI	CTAG	5 cut(s)	107, 989, 1020, 1026, 2076
ZraI	GACGTC	1 cut(s)	70
ZrmI	AGTACT	1 cut(s)	1024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.