Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0011099

Physical Location & Seq

Genomic Coordinates Forward (+)

25960255 .. 25966273

Gene Structure 6019 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG250400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGGGAAGTGGAGTCTCCACCCTCTCCTCTTGCTTCAGATCGGCTCACCCAACCCCCGACCACAACGACGTCGTCTTCTCCGCCTCCGAGCCCTTGGACGAAACCCTAGGCCATTCTTTCTGCTATGTAAGGTCCTCCGCTCGCTTCCTCTCCCCCACTCAGTCGGATCGCTTTCTTTCCCCTTCCAACTCCCTCCGGTTCTCGCCGCCGCACGAGACCCGCGCCCGGCCCGGCCTCCCCGAGACCGGGTTCAAGGCCATCTCCGGCGCCTCCGTCAGTGCCAACAGCTCCACTCCCCGGACTGTCCTCCAGCTTGACAATATTTACGACGATGCCACTGAGAGTGTCAACGGTGGCTTCGGCGGCGGAGTGAGGGGCAGCATCGTCAATGGTTTCGAGAGTACGTCGTCGTTTAGTGCCCTGCCTCTCCAGCCGGTGCCGCGGGGAGGCGAGCCCTCGGGCCCAATGGAGCGCGGCGGCTTCTTTCTCTCCGGTCCGATAGAGCGTGGGGCGCTCTCCGGTCCGCTCGACTCGAACCCGCCCGGACCGGACGGCGATGTCCACTTCTCGGCGCCGCTCGGCGGTCTTTACGCCAAGAAGAGGCGGAAGAAGGGCATTTCCGGGATCCGGAAGGCGTTTTACCGCAACTTCGAGAAGAAGCAACGGCCGTGGGTGGTGCCGGTGCTCAATAATTTCGTCGGCCGGAAGGAGGGGCCACCGGCGAACGGGGAGGAGCACGAGACGGCGAGGAATAATGAGACCAATGTCCAGTGGGCTCTCGGCAAAGCCGGGGAGGACCGGGTACATGTGGTGGTTTCGGAGGAGCAAGGGTGGCTCTTTGTTGGGATTTATGATGGGTTTAACGGCCCTGATGCGCCGGAGTTCTTGATGGGGAATCTTTACCGTGCTTTTTACAATGAGCTTCAGGGCTTGTTTTGGGAGGTTGATGATGATGAGGAAGCCCAAGAAGGCAATCATGCAAACCCACCAGATGTTGCCCAACAAGTTAGTGCTACTACTAGCTCACCAAATCTTGCTTCAGAGGGTGAGGCTAAAATTGATGGGGAAGTTTCGGATGCTGGAAATGGGTCGAGTTTGAATTCTGACCCCTCCGCGGCGGGTGATCGGACAAAGAGAGTGACATTTCAACCGGAGGGGAGGAGGCGCCGGCTGTGGGAGTTACTCCGCGAGGCTGAGGCTGAAGAAGGGCTTGACCTTTCAGGTTCAGAGAGGTTTGCGTTTTCTGTGGATGATGCTCTCACTGTCAGCAATGCTGGTTCGGCTGGTTCTGCTGAGAGTAGGAGGTGGCTTTTGTTGTCAAAATTGAAGCAGGGATTATCTAAGCATAAGGATGGCCAGGGTCCTGGTAAGAAGCTGTTTCCGTGGAGGTTTGGTTTGGAGGATAAAGAGAAGGTTGAGGTTGAGAATAGAGTGGAGGAGAGGTCTGCTCCGCCTGGTAGGAGAAGGAAGGAGGGTCCGGTCGATCATGAATTGGTGTTGAGGGCATTGTCAAGGGCTTTACAGGTGACGGAGCTTGCTTATTTGGATATGACTGATAAGGTCATTGACACAAATCCAGAGCTTGCTTTGATGGGGTCGTGTTTGTTGGTTGTGCTAATGAGGGATGAAGATGTGTATGTGATGAATGTGGGGGATAGTAGGGCGATTGTTGCACATTATGAGCCGGAGGAAGTTGGTACAAGCGTGAAATCAGGGGGGCAGAAGGACAATGGGTTGAGTGCTGAGGACATAACTGAGGCATCCTCAGCTGTGGGCGATGATGCTCCTACTCAACCAATGAGATTGGCTGCATTGCAGCTGTCCACTGATCACAGCACAAGCATTGAAGAAGAAGTGATAAGAATCAAGAATGAACACCCAGATGACAAAAACTGTATTCTCAATGATAGAGTGAAAGGTCGTCTTAAGGTTACCAGAGCGTTTGGGGCAGGCTTTCTGAAACAGCCCAAGTTCAATGCTCCGCTATTGGAAATGTTTCGGAATGAGTACATTGGTACCGCACCATACATCTCATGTTTGCCTTCTCTTCGCCACCACAGACTCTGCCCTAGTGATCAGTTTTTGATTCTTTCATCTGACGGTCTGTATCAGTATCTAAGCAATCAGGAAGTTGTTTCTCATGTGGAGAATTTTATGGAGAAGTTTCCCGAGGGAGACCCTGCACAACACCTGATAGAGGAGCTTCTTTTCCGTGCTGCAAAGAAAGCCGGAATGGATTTCCATGAATTACTGGACATCCCTCAAGGAGATCGCAGGAAGTATCACGATGATGTAACTGTTATGGTCATATCACTTGAAGGAAGAATTTGGAAGTCATCAGGAAAGTACCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005623 GO:0005886 GO:0006355 GO:0008150 GO:0008289 GO:0009653 GO:0009826 GO:0009888 GO:0009889 GO:0009933 GO:0009987 GO:0010073 GO:0010074 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0019827 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043167 GO:0043168 GO:0044464 GO:0048507 GO:0048532 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0060560 GO:0065007 GO:0071840 GO:0071944 GO:0080090 GO:0098727 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C

Protein Analysis

784

Amino Acids

85.98

Weight (kDa)

5.35

Isoelectric Point (pI)

46.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PP2C	PF00481	606 - 733	3.7e-21	Protein phosphatase 2C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0011099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35350
fragaria_vesca	FvH4_5g21630 FvH4_5g21630
malus_domestica	MD06G1031300.v1.1 MD16G1277400.v1.1
prunus_persica	Prupe.5G040900_v2.0.a1
pyrus_communis	pycom06g02610 pycom16g24670
rosa_chinensis	RchiOBHm_Chr7g0209091
rosa_laevigata	RLG00000003168
rosa_multiflora	Rmu_co8472153.1_g000001 Rmu_sc0000821.1_g000009 Rmu_sc0012788.1_g000001
rosa_roxburghii	Rroxscaffold_3G00249760
rosa_rugosa	Rorug07G0109000
rosa_samantha	Rh7AG243400 Rh7BG238500 Rh7CG258600 Rh7DG250400
rosa_wichuraiana	Rw7G020630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	557
AatII	GACGTC	1 cut(s)	72
Acc65I	GGTACC	1 cut(s)	2015
AccB1I	GGYRCC	6 cut(s)	266, 436, 571, 676, 1164, 2015
AccBSI	CCGCTC	3 cut(s)	140, 526, 577
AccII	CGCG	5 cut(s)	222, 442, 474, 1115, 1188
AccIII	TCCGGA	1 cut(s)	627
AclWI	GGATC	3 cut(s)	174, 619, 632
AcoI	YGGCCR	3 cut(s)	665, 700, 1354
AcsI	RAATTY	3 cut(s)	1099, 2149, 2325
AcuI	CTGAAG	4 cut(s)	19, 908, 1023, 1221
AcyI	GRCGYC	4 cut(s)	69, 267, 572, 1165
AfaI	GTAC	6 cut(s)	403, 804, 1699, 2009, 2017, 2348
AflII	CTTAAG	1 cut(s)	1925
AflIII	ACRYGT	1 cut(s)	805
AgsI	TTSAA	7 cut(s)	253, 1099, 1148, 1327, 1847, 1975, 2318
AjnI	CCWGG	3 cut(s)	1356, 1363, 1453
AjuI	GAANNNNNNNTTGG	2 cut(s)	1021, 1053
Alw21I	GWGCWC	2 cut(s)	687, 738
Alw26I	GTCTC	6 cut(s)	19, 209, 236, 734, 752, 2169
AlwI	GGATC	3 cut(s)	174, 619, 632
AlwNI	CAGNNNCTG	1 cut(s)	2064
Ama87I	CYCGRG	3 cut(s)	239, 457, 2168
Aor13HI	TCCGGA	1 cut(s)	627
ApaI	GGGCCC	1 cut(s)	464
ApeKI	GCWGC	4 cut(s)	378, 1808, 1816, 2216
ApoI	RAATTY	3 cut(s)	1099, 2149, 2325
Asp700I	GAANNNNTTC	1 cut(s)	1995
Asp718I	GGTACC	1 cut(s)	2015
AspA2I	CCTAGG	1 cut(s)	106
AspLEI	GCGC	7 cut(s)	224, 269, 474, 514, 574, 877, 1167
AsuC2I	CCSGG	8 cut(s)	226, 231, 247, 298, 543, 622, 790, 800
AsuHPI	GGTGA	5 cut(s)	38, 1017, 1058, 1133, 1537
AvaI	CYCGRG	3 cut(s)	239, 457, 2168
AvaII	GGWCC	7 cut(s)	132, 494, 521, 545, 796, 1361, 1475
AvrII	CCTAGG	1 cut(s)	106
BaeGI	GKGCMC	2 cut(s)	421, 464
BaeI	ACNNNNGTAYC	4 cut(s)	1689, 1722, 1999, 2032
BalI	TGGCCA	1 cut(s)	1356
BamHI	GGATCC	1 cut(s)	624
BanI	GGYRCC	6 cut(s)	266, 436, 571, 676, 1164, 2015
BanII	GRGCYC	4 cut(s)	93, 456, 464, 778
BarI	GAAGNNNNNNTAC	2 cut(s)	623, 655
BauI	CACGAG	2 cut(s)	212, 737
BbsI	GAAGAC	1 cut(s)	67
Bbv12I	GWGCWC	2 cut(s)	687, 738
BbvCI	CCTCAGC	3 cut(s)	1194, 1743, 1765
BbvI	GCAGC	4 cut(s)	390, 1795, 1828, 2203
BccI	CCATC	6 cut(s)	266, 848, 883, 1055, 1346, 1585
BceAI	ACGGC	5 cut(s)	568, 652, 680, 759, 880
BciT130I	CCWGG	3 cut(s)	1358, 1365, 1455
BclI	TGATCA	2 cut(s)	1828, 2074
BcnI	CCSGG	8 cut(s)	226, 231, 247, 298, 543, 622, 790, 800
BcoDI	GTCTC	6 cut(s)	19, 209, 236, 734, 752, 2169
BfaI	CTAG	3 cut(s)	107, 1020, 2070
BfoI	RGCGCY	4 cut(s)	270, 515, 575, 1168
BfrI	CTTAAG	1 cut(s)	1925
BlnI	CCTAGG	1 cut(s)	106
Bme18I	GGWCC	7 cut(s)	132, 494, 521, 545, 796, 1361, 1475
BmeT110I	CYCGRG	3 cut(s)	239, 457, 2168
BmsI	GCATC	7 cut(s)	322, 390, 862, 1066, 1243, 1769, 1771
BoxI	GACNNNNGTC	1 cut(s)	764
BpiI	GAAGAC	1 cut(s)	67
BplI	GAGNNNNNCTC	4 cut(s)	1432, 1464, 1748, 1780
BpmI	CTGGAG	2 cut(s)	293, 413
Bpu10I	CCTNAGC	3 cut(s)	1194, 1743, 1765
BpuEI	CTTGAG	1 cut(s)	2247
BpuMI	CCSGG	8 cut(s)	226, 231, 247, 298, 543, 622, 790, 800
BsaBI	GATNNNNATC	1 cut(s)	1862
BsaHI	GRCGYC	4 cut(s)	69, 267, 572, 1165
BsaI	GGTCTC	4 cut(s)	209, 236, 752, 2169
BsaWI	WCCGGW	7 cut(s)	195, 491, 518, 547, 627, 1150, 1477
BsaXI	ACNNNNNCTCC	6 cut(s)	815, 845, 1378, 1408, 1427, 1457
Bse118I	RCCGGY	4 cut(s)	433, 679, 718, 1167
Bse1I	ACTGG	2 cut(s)	769, 2256
Bse3DI	GCAATG	2 cut(s)	1276, 1811
Bse8I	GATNNNNATC	1 cut(s)	1862
BseAI	TCCGGA	1 cut(s)	627
BseBI	CCWGG	3 cut(s)	1358, 1365, 1455
BseGI	GGATG	6 cut(s)	1081, 1255, 1357, 1630, 1760, 2256
BseJI	GATNNNNATC	1 cut(s)	1862
BseMI	GCAATG	2 cut(s)	1276, 1811
BseMII	CTCAG	7 cut(s)	173, 330, 1185, 1284, 1734, 1746, 1779
BseNI	ACTGG	2 cut(s)	769, 2256
BseRI	GAGGAG	6 cut(s)	16, 746, 836, 1174, 1451, 2213
BseSI	GKGCMC	2 cut(s)	421, 464
BseX3I	CGGCCG	2 cut(s)	665, 700
BseXI	GCAGC	4 cut(s)	390, 1795, 1828, 2203
BsgI	GTGCAG	1 cut(s)	2166
Bsh1236I	CGCG	5 cut(s)	222, 442, 474, 1115, 1188
Bsh1285I	CGRYCG	3 cut(s)	668, 703, 1482
BshNI	GGYRCC	6 cut(s)	266, 436, 571, 676, 1164, 2015
BsiEI	CGRYCG	3 cut(s)	668, 703, 1482
BsiHKAI	GWGCWC	2 cut(s)	687, 738
BsiHKCI	CYCGRG	3 cut(s)	239, 457, 2168
BsmAI	GTCTC	6 cut(s)	19, 209, 236, 734, 752, 2169
BsmBI	CGTCTC	1 cut(s)	734
Bso31I	GGTCTC	4 cut(s)	209, 236, 752, 2169
BsoBI	CYCGRG	3 cut(s)	239, 457, 2168
Bsp120I	GGGCCC	1 cut(s)	460
Bsp1286I	GDGCHC	7 cut(s)	93, 421, 456, 464, 687, 738, 778
Bsp13I	TCCGGA	1 cut(s)	627
Bsp143I	GATC	8 cut(s)	38, 166, 624, 1123, 1483, 1828, 2074, 2269
BspCNI	CTCAG	7 cut(s)	172, 331, 1186, 1285, 1735, 1747, 1778
BspEI	TCCGGA	1 cut(s)	627
BspFNI	CGCG	5 cut(s)	222, 442, 474, 1115, 1188
BspHI	TCATGA	1 cut(s)	1486
BspPI	GGATC	3 cut(s)	174, 619, 632
BspT107I	GGYRCC	6 cut(s)	266, 436, 571, 676, 1164, 2015
BspTI	CTTAAG	1 cut(s)	1925
BspTNI	GGTCTC	4 cut(s)	209, 236, 752, 2169
BsrBI	CCGCTC	3 cut(s)	140, 526, 577
BsrDI	GCAATG	2 cut(s)	1276, 1811
BsrFI	RCCGGY	4 cut(s)	433, 679, 718, 1167
BsrI	ACTGG	2 cut(s)	769, 2256
BssAI	RCCGGY	4 cut(s)	433, 679, 718, 1167
BssMI	GATC	8 cut(s)	38, 166, 624, 1123, 1483, 1828, 2074, 2269
BssNI	GRCGYC	4 cut(s)	69, 267, 572, 1165
BssSI	CACGAG	2 cut(s)	212, 737
BssT1I	CCWWGG	2 cut(s)	93, 106
Bst2BI	CACGAG	2 cut(s)	212, 737
Bst2UI	CCWGG	3 cut(s)	1358, 1365, 1455
Bst4CI	ACNGT	7 cut(s)	304, 353, 905, 1264, 1895, 2102, 2299
Bst6I	CTCTTC	2 cut(s)	593, 2052
BstACI	GRCGYC	4 cut(s)	69, 267, 572, 1165
BstAFI	CTTAAG	1 cut(s)	1925
BstC8I	GCNNGC	6 cut(s)	142, 452, 1169, 1536, 1584, 1951
BstDEI	CTNAG	9 cut(s)	159, 339, 1194, 1293, 1341, 1743, 1755, 1765, 2117
BstDSI	CCRYGG	4 cut(s)	440, 668, 1113, 1382
BstEII	GGTNACC	1 cut(s)	1930
BstENI	CCTNNNNNAGG	1 cut(s)	2195
BstF5I	GGATG	6 cut(s)	1081, 1255, 1357, 1630, 1760, 2256
BstFNI	CGCG	5 cut(s)	222, 442, 474, 1115, 1188
BstH2I	RGCGCY	4 cut(s)	270, 515, 575, 1168
BstHHI	GCGC	7 cut(s)	224, 269, 474, 514, 574, 877, 1167
BstKTI	GATC	8 cut(s)	41, 169, 627, 1126, 1486, 1831, 2077, 2272
BstMAI	GTCTC	6 cut(s)	19, 209, 236, 734, 752, 2169
BstMBI	GATC	8 cut(s)	38, 166, 624, 1123, 1483, 1828, 2074, 2269
BstMCI	CGRYCG	3 cut(s)	668, 703, 1482
BstNI	CCWGG	3 cut(s)	1358, 1365, 1455
BstNSI	RCATGY	1 cut(s)	809
BstPAI	GACNNNNGTC	1 cut(s)	764
BstPI	GGTNACC	1 cut(s)	1930
BstSLI	GKGCMC	2 cut(s)	421, 464
BstUI	CGCG	5 cut(s)	222, 442, 474, 1115, 1188
BstV1I	GCAGC	4 cut(s)	390, 1795, 1828, 2203
BstV2I	GAAGAC	1 cut(s)	67
BstX2I	RGATCY	1 cut(s)	624
BstXI	CCANNNNNNTGG	1 cut(s)	1364
BstYI	RGATCY	1 cut(s)	624
BstZI	CGGCCG	2 cut(s)	665, 700
BtgI	CCRYGG	4 cut(s)	440, 668, 1113, 1382
BtgZI	GCGATG	2 cut(s)	570, 1791
BtsCI	GGATG	6 cut(s)	1081, 1255, 1357, 1630, 1760, 2256
BtsIMutI	CAGTG	5 cut(s)	283, 336, 776, 1260, 1824
Cac8I	GCNNGC	6 cut(s)	142, 452, 1169, 1536, 1584, 1951
CaiI	CAGNNNCTG	1 cut(s)	2064
CciI	TCATGA	1 cut(s)	1486
CfoI	GCGC	7 cut(s)	224, 269, 474, 514, 574, 877, 1167
Cfr10I	RCCGGY	4 cut(s)	433, 679, 718, 1167
Cfr42I	CCGCGG	2 cut(s)	443, 1116
CpoI	CGGWCCG	3 cut(s)	494, 521, 545
Csp6I	GTAC	6 cut(s)	402, 803, 1698, 2008, 2016, 2347
CspCI	CAANNNNNGTGG	2 cut(s)	650, 685
CspI	CGGWCCG	3 cut(s)	494, 521, 545
CviAII	CATG	6 cut(s)	806, 977, 1487, 2034, 2141, 2243
CviQI	GTAC	6 cut(s)	402, 803, 1698, 2008, 2016, 2347
DdeI	CTNAG	9 cut(s)	159, 339, 1194, 1293, 1341, 1743, 1755, 1765, 2117
DinI	GGCGCC	3 cut(s)	268, 573, 1166
DpnI	GATC	8 cut(s)	40, 168, 626, 1125, 1485, 1830, 2076, 2271
DpnII	GATC	8 cut(s)	38, 166, 624, 1123, 1483, 1828, 2074, 2269
DrdI	GACNNNNNNGTC	1 cut(s)	557
DseDI	GACNNNNNNGTC	1 cut(s)	557
EaeI	YGGCCR	3 cut(s)	665, 700, 1354
EagI	CGGCCG	2 cut(s)	665, 700
Eam1104I	CTCTTC	2 cut(s)	593, 2052
EarI	CTCTTC	2 cut(s)	593, 2052
EciI	GGCGGA	4 cut(s)	70, 381, 619, 1440
EclXI	CGGCCG	2 cut(s)	665, 700
Eco130I	CCWWGG	2 cut(s)	93, 106
Eco24I	GRGCYC	4 cut(s)	93, 456, 464, 778
Eco31I	GGTCTC	4 cut(s)	209, 236, 752, 2169
Eco47I	GGWCC	7 cut(s)	132, 494, 521, 545, 796, 1361, 1475
Eco52I	CGGCCG	2 cut(s)	665, 700
Eco57I	CTGAAG	4 cut(s)	19, 908, 1023, 1221
Eco88I	CYCGRG	3 cut(s)	239, 457, 2168
Eco91I	GGTNACC	1 cut(s)	1930
EcoNI	CCTNNNNNAGG	1 cut(s)	2195
EcoO109I	RGGNCCY	2 cut(s)	132, 1361
EcoO65I	GGTNACC	1 cut(s)	1930
EcoRI	GAATTC	1 cut(s)	1099
EcoRII	CCWGG	3 cut(s)	1356, 1363, 1453
EcoT14I	CCWWGG	2 cut(s)	93, 106
EcoT38I	GRGCYC	4 cut(s)	93, 456, 464, 778
EgeI	GGCGCC	3 cut(s)	268, 573, 1166
EheI	GGCGCC	3 cut(s)	268, 573, 1166
ErhI	CCWWGG	2 cut(s)	93, 106
Esp3I	CGTCTC	1 cut(s)	734
FaeI	CATG	6 cut(s)	809, 980, 1490, 2037, 2144, 2246
FalI	AAGNNNNNCTT	4 cut(s)	1194, 1226, 1908, 1940
FatI	CATG	6 cut(s)	805, 976, 1486, 2033, 2140, 2242
FauI	CCCGC	4 cut(s)	227, 435, 546, 1111
FbaI	TGATCA	2 cut(s)	1828, 2074
FokI	GGATG	6 cut(s)	1088, 1262, 1364, 1637, 1747, 2243
FriOI	GRGCYC	4 cut(s)	93, 456, 464, 778
FspBI	CTAG	3 cut(s)	107, 1020, 2070
GlaI	GCGC	7 cut(s)	223, 268, 473, 513, 573, 876, 1166
GsuI	CTGGAG	2 cut(s)	293, 413
HaeII	RGCGCY	4 cut(s)	270, 515, 575, 1168
HhaI	GCGC	7 cut(s)	224, 269, 474, 514, 574, 877, 1167
Hin1I	GRCGYC	4 cut(s)	69, 267, 572, 1165
Hin1II	CATG	6 cut(s)	809, 980, 1490, 2037, 2144, 2246
Hin6I	GCGC	7 cut(s)	222, 267, 472, 512, 572, 875, 1165
HinP1I	GCGC	7 cut(s)	222, 267, 472, 512, 572, 875, 1165
HincII	GTYRAC	1 cut(s)	349
HindII	GTYRAC	1 cut(s)	349
HinfI	GANTC	6 cut(s)	12, 530, 895, 1863, 2061, 2086
HphI	GGTGA	5 cut(s)	38, 1017, 1058, 1133, 1537
Hpy166II	GTNNAC	3 cut(s)	349, 562, 1824
Hpy8I	GTNNAC	3 cut(s)	349, 562, 1824
Hpy99I	CGWCG	6 cut(s)	71, 74, 332, 409, 412, 701
HpyCH4III	ACNGT	7 cut(s)	304, 353, 905, 1264, 1895, 2102, 2299
HpyCH4IV	ACGT	2 cut(s)	69, 404
HpyCH4V	TGCA	6 cut(s)	980, 1673, 1811, 1816, 2183, 2219
HpyF3I	CTNAG	9 cut(s)	159, 339, 1194, 1293, 1341, 1743, 1755, 1765, 2117
HpySE526I	ACGT	2 cut(s)	69, 404
Hsp92I	GRCGYC	4 cut(s)	69, 267, 572, 1165
Hsp92II	CATG	6 cut(s)	809, 980, 1490, 2037, 2144, 2246
HspAI	GCGC	7 cut(s)	222, 267, 472, 512, 572, 875, 1165
KasI	GGCGCC	3 cut(s)	266, 571, 1164
Kpn2I	TCCGGA	1 cut(s)	627
KpnI	GGTACC	1 cut(s)	2019
KroI	GCCGGC	1 cut(s)	1167
KroNI	GCCGGC	1 cut(s)	1169
Ksp22I	TGATCA	2 cut(s)	1828, 2074
KspI	CCGCGG	2 cut(s)	443, 1116
Kzo9I	GATC	8 cut(s)	38, 166, 624, 1123, 1483, 1828, 2074, 2269
LmnI	GCTCC	9 cut(s)	293, 469, 733, 823, 1453, 1531, 1789, 1984, 2200
Lsp1109I	GCAGC	4 cut(s)	390, 1795, 1828, 2203
LweI	GCATC	7 cut(s)	322, 390, 862, 1066, 1243, 1769, 1771
MaeI	CTAG	3 cut(s)	107, 1020, 2070
MaeII	ACGT	2 cut(s)	69, 404
MaeIII	GTNAC	5 cut(s)	1138, 1179, 1525, 1930, 2293
MalI	GATC	8 cut(s)	40, 168, 626, 1125, 1485, 1830, 2076, 2271
MbiI	CCGCTC	3 cut(s)	140, 526, 577
MboI	GATC	8 cut(s)	38, 166, 624, 1123, 1483, 1828, 2074, 2269
MflI	RGATCY	1 cut(s)	624
MhlI	GDGCHC	7 cut(s)	93, 421, 456, 464, 687, 738, 778
MlsI	TGGCCA	1 cut(s)	1356
MluCI	AATT	8 cut(s)	691, 1056, 1099, 1322, 1490, 2149, 2246, 2325
MluNI	TGGCCA	1 cut(s)	1356
Mly113I	GGCGCC	3 cut(s)	267, 572, 1165
MlyI	GAGTC	3 cut(s)	21, 524, 2055
MmeI	TCCRAC	2 cut(s)	144, 210
Mox20I	TGGCCA	1 cut(s)	1356
MroI	TCCGGA	1 cut(s)	627
MroNI	GCCGGC	1 cut(s)	1167
MroXI	GAANNNNTTC	1 cut(s)	1995
MscI	TGGCCA	1 cut(s)	1356
MseI	TTAA	2 cut(s)	861, 1926
MslI	CAYNNNNRTG	3 cut(s)	1350, 1881, 2289
Msp20I	TGGCCA	1 cut(s)	1356
MspA1I	CMGCKG	4 cut(s)	442, 1115, 1769, 1819
MspCI	CTTAAG	1 cut(s)	1925
MvaI	CCWGG	3 cut(s)	1358, 1365, 1455
MvnI	CGCG	5 cut(s)	222, 442, 474, 1115, 1188
NaeI	GCCGGC	1 cut(s)	1169
NarI	GGCGCC	3 cut(s)	267, 572, 1165
NciI	CCSGG	8 cut(s)	226, 231, 247, 298, 543, 622, 790, 800
NdeII	GATC	8 cut(s)	38, 166, 624, 1123, 1483, 1828, 2074, 2269
NgoMIV	GCCGGC	1 cut(s)	1167
NlaIII	CATG	6 cut(s)	809, 980, 1490, 2037, 2144, 2246
NmeAIII	GCCGAG	3 cut(s)	548, 558, 759
NmuCI	GTSAC	2 cut(s)	1138, 1525
NspI	RCATGY	1 cut(s)	809
PagI	TCATGA	1 cut(s)	1486
PciI	ACATGT	1 cut(s)	805
PdiI	GCCGGC	1 cut(s)	1169
PdmI	GAANNNNTTC	1 cut(s)	1995
PfeI	GAWTC	3 cut(s)	895, 1863, 2086
PflFI	GACNNNGTC	1 cut(s)	71
PfoI	TCCNGGA	1 cut(s)	620
PleI	GAGTC	3 cut(s)	20, 524, 2055
PluTI	GGCGCC	3 cut(s)	270, 575, 1168
PpsI	GAGTC	3 cut(s)	20, 524, 2055
PpuMI	RGGWCCY	2 cut(s)	132, 1361
PscI	ACATGT	1 cut(s)	805
PshAI	GACNNNNGTC	1 cut(s)	764
Psp5II	RGGWCCY	2 cut(s)	132, 1361
Psp6I	CCWGG	3 cut(s)	1356, 1363, 1453
PspEI	GGTNACC	1 cut(s)	1930
PspGI	CCWGG	3 cut(s)	1356, 1363, 1453
PspOMI	GGGCCC	1 cut(s)	460
PspPPI	RGGWCCY	2 cut(s)	132, 1361
PstNI	CAGNNNCTG	1 cut(s)	2064
PsuI	RGATCY	1 cut(s)	624
PsyI	GACNNNGTC	1 cut(s)	71
PvuII	CAGCTG	2 cut(s)	1769, 1819
RsaI	GTAC	6 cut(s)	403, 804, 1699, 2009, 2017, 2348
RsaNI	GTAC	6 cut(s)	402, 803, 1698, 2008, 2016, 2347
RseI	CAYNNNNRTG	3 cut(s)	1350, 1881, 2289
Rsr2I	CGGWCCG	3 cut(s)	494, 521, 545
RsrII	CGGWCCG	3 cut(s)	494, 521, 545
SacII	CCGCGG	2 cut(s)	443, 1116
SaqAI	TTAA	2 cut(s)	861, 1926
Sau3AI	GATC	8 cut(s)	38, 166, 624, 1123, 1483, 1828, 2074, 2269
SchI	GAGTC	3 cut(s)	21, 524, 2055
SduI	GDGCHC	7 cut(s)	93, 421, 456, 464, 687, 738, 778
SfaNI	GCATC	7 cut(s)	322, 390, 862, 1066, 1243, 1769, 1771
SfoI	GGCGCC	3 cut(s)	268, 573, 1166
Sfr303I	CCGCGG	2 cut(s)	443, 1116
SgrAI	CRCCGGYG	1 cut(s)	718
SgrBI	CCGCGG	2 cut(s)	443, 1116
SinI	GGWCC	7 cut(s)	132, 494, 521, 545, 796, 1361, 1475
SmiMI	CAYNNNNRTG	3 cut(s)	1350, 1881, 2289
SmlI	CTYRAG	2 cut(s)	1925, 2262
SmoI	CTYRAG	2 cut(s)	1925, 2262
Sse9I	AATT	8 cut(s)	691, 1056, 1099, 1322, 1490, 2149, 2246, 2325
SspDI	GGCGCC	3 cut(s)	266, 571, 1164
SspI	AATATT	1 cut(s)	322
SspMI	CTAG	3 cut(s)	107, 1020, 2070
StyI	CCWWGG	2 cut(s)	93, 106
TaaI	ACNGT	7 cut(s)	304, 353, 905, 1264, 1895, 2102, 2299
TaiI	ACGT	2 cut(s)	72, 407
TaqI	TCGA	6 cut(s)	396, 528, 533, 651, 1091, 1482
TasI	AATT	8 cut(s)	691, 1056, 1099, 1322, 1490, 2149, 2246, 2325
TatI	WGTACW	1 cut(s)	2007
TauI	GCSGC	8 cut(s)	208, 211, 366, 442, 477, 480, 577, 1118
TfiI	GAWTC	3 cut(s)	895, 1863, 2086
Tru1I	TTAA	2 cut(s)	861, 1926
Tru9I	TTAA	2 cut(s)	861, 1926
TscAI	CASTG	5 cut(s)	283, 343, 776, 1267, 1831
TseFI	GTSAC	2 cut(s)	1138, 1525
TseI	GCWGC	4 cut(s)	378, 1808, 1816, 2216
Tsp45I	GTSAC	2 cut(s)	1138, 1525
TspDTI	ATGAA	6 cut(s)	1503, 1641, 1658, 1887, 2082, 2259
TspGWI	ACGGA	4 cut(s)	262, 1371, 1544, 2201
TspRI	CASTG	5 cut(s)	283, 343, 776, 1267, 1831
Tth111I	GACNNNGTC	1 cut(s)	71
Vha464I	CTTAAG	1 cut(s)	1925
VpaK11BI	GGWCC	7 cut(s)	132, 494, 521, 545, 796, 1361, 1475
XagI	CCTNNNNNAGG	1 cut(s)	2195
XapI	RAATTY	3 cut(s)	1099, 2149, 2325
XceI	RCATGY	1 cut(s)	809
XmaJI	CCTAGG	1 cut(s)	106
XmnI	GAANNNNTTC	1 cut(s)	1995
XspI	CTAG	3 cut(s)	107, 1020, 2070
ZraI	GACGTC	1 cut(s)	70

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.