Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0011099

Physical Location & Seq

Genomic Coordinates Reverse (-)

43532879 .. 43538471

Gene Structure 5593 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00249760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGGGAAGTGGAGTCTCCACCCTCTCCTCTTGCTTCAGATCGGCTCATCCAACCGCCGACCACAACGACGTCGTCTTCTCCGCCTCCGAGCCCTTGGACGAAACCCTAGGCCATTCTTTCTGCTATGTAAGGTCCTCCGCTCGCTTCCTCTCCCCCACTCAGTCGGATCGCTTTCTTTCCCCTTCCAACTCCCTCCGGTTCTCGCCGCCGCACGAGACCCGGACCCGGCCCGGCGCCCCCGAGACCGGGTTCAAGGCCATCTCCGGCGCCTCCGTCAGTGCCAACAGCTCCACTCCCCGGACTGTCCTCCAGCTTGACAATATTTACGACGATGCCACTGAGAGTGTGAACGGTGGCTTCGGCGGCGGAGTGAGGGGCAGCATAGTCAATGGTTTCGAGAGTACGTCGTCGTTTAGTGCCTTGCCTCTCCAGCCGGTGCCGCGGGGAGGCGAGCCGTCGGGGCCAATGGAGCGCGGCGGGTTCTTTCTCTCCGGTCCGATAGAGCGTGGGGCGCTCTCCGGTCCGCTCGACTCGAACCCGCCCGGACCGGACGGCGACGTCCACTTCTCGGCGCCGCTCGGCGGTCTTTACGCGAAGAAGAGGAGGAAGAAGGGCATTTCCGGGATCAGGAAGGCTTTTTACCGCAACTTCGAGAAGAAGCAACGGCCGTGGGTGGTGCCGGTGCTCAATAATTTCGGCGGCCGGAAGGAGGGACCACCGGCGAACGGCGAGGAGCACGAGACGGCGAGGAATAATGAGACCAATGTCCAGTGGGCTCTCGGTAAAGCCGGGGAGGACCGGGTACATGTGGTGGTTTCGGAGGAGCAAGGGTGGCTGTTTGTTGGGATTTATGATGGGTTTAACGGCCCTGATGCGCCGGAGTTCTTGATGGGGAATCTTTACCGTGCTTTTTACAATGAGCTTCAGGGCTTGTTTTGGGAGGTTGATGATGATGAGGAGGAAGCCCAAGAAGGCAATCATACAAACCCACCAGATGTTGCCCAAGAAGTTAATGCTACTACTAGCTCACCAAATCCTGCTTCAGAGGGTGAGGCTAAAATTGATGGGGAAGTTTCGGATGCTGGAAATGGGTCGAATTCGAATCCAGACCCCTCGCTGGCGGGTGATCGGACAAAGAGAGTGACATTTCAACCGGAGGGGAGGAGGCGCCGGCTGTGGGAGTTACTCCGCGAGGCTGAGGCTGAGGAAGGGCTTGACCTTTCAGGTTCGGAGAGGTTTGCGTTTTCTGTGGATGATGCTCTTACTGTCAGCAATGCTGGTTCGGCTGGCTCTGCAGAGAGTAGGAGGTGGCTTTTGTTGTCGAAATTGAAACAGGGATTATCTAAGCATAAGGATGGCCAGGGTCCTGGTAAGAAGTTGTTTCCGTGGAGGTTTGGTTTGGAGGATAAAGAGAAGGTTGAGGTTGAGAATAGAGTGGAGGAGAGGTCTGCTCCGCCTGGTAGGAGAAGGAAGGAGGGTCCGGTCGATCATGAATTGGTGTTGAGGGCATTGTCAAGGGCTTTGCAGGTGACGGAGCTTGCTTATTTGGATATGACTGATAAGGTCATTGATACAAATCCAGAGCTTGCTTTGATGGGGTCATGTTTGTTGGTTGTGCTAATGAGGGATGAAGATGTGGGGCAGAAGGACAATGGGTTGAGTGCTGAGGACATAACTGAGGCATCCTCAGCTGTGGGCGATGAGGCTCCTACTCAACCAATGAGATTGGCGGCATTGCAGCTGTCCACTGATCACAGCACGAGCATTGAAGAAGAAGTGATAAGAATCAAGAATGAACACCCAGATGACAAAAACTGTATTCTCAATGATAGACCCAAGTTCAATGCTCCGCTATTGGAAATGTTTCGGAATGAGTACATTGGTACCGCACCATACATCTCATGTTTGCCTTCTCTTTGCCACCACAGACTCTGCCCTAGTGATCAGTTTTTGATTCTTTCATCTGATGGTCTGTATCAGTATCTAAGCAATCAGGAAGTTGTTTCTCATGTGGAGAATTTTATGGAGAAGTTTCCCGAGGGAGACCCTGCACAACACCTGATAGAGGAGCTTCTTTTCCGTGCTGCAAAGAAAGCCGGAATGGATTTCCATGAATTACTAGACATCCCTCAAGGAGATCGCAGGAAGTATCACGATGATGTTACTGTTATGGTCATATCACTTGAAGGAAGAATTTGGAAGTCATCAGGAAAGTACCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005623 GO:0005886 GO:0006355 GO:0008150 GO:0008289 GO:0009653 GO:0009826 GO:0009888 GO:0009889 GO:0009933 GO:0009987 GO:0010073 GO:0010074 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0019827 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043167 GO:0043168 GO:0044464 GO:0048507 GO:0048532 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0060560 GO:0065007 GO:0071840 GO:0071944 GO:0080090 GO:0098727 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C

Protein Analysis

740

Amino Acids

81.25

Weight (kDa)

5.12

Isoelectric Point (pI)

47.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PP2C	PF00481	580 - 689	6e-11	Protein phosphatase 2C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35350
fragaria_vesca	FvH4_5g21630 FvH4_5g21630
malus_domestica	MD06G1031300.v1.1 MD16G1277400.v1.1
prunus_persica	Prupe.5G040900_v2.0.a1
pyrus_communis	pycom06g02610 pycom16g24670
rosa_chinensis	RchiOBHm_Chr7g0209091
rosa_laevigata	RLG00000003168
rosa_multiflora	Rmu_co8472153.1_g000001 Rmu_sc0000821.1_g000009 Rmu_sc0012788.1_g000001
rosa_roxburghii	Rroxscaffold_3G00249760
rosa_rugosa	Rorug07G0109000
rosa_samantha	Rh7AG243400 Rh7BG238500 Rh7CG258600 Rh7DG250400
rosa_wichuraiana	Rw7G020630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1516
AasI	GACNNNNNNGTC	1 cut(s)	557
AatII	GACGTC	2 cut(s)	72, 561
Acc36I	ACCTGC	1 cut(s)	1516
Acc65I	GGTACC	1 cut(s)	1883
AccB1I	GGYRCC	7 cut(s)	233, 266, 436, 571, 676, 1167, 1883
AccBSI	CCGCTC	3 cut(s)	140, 526, 577
AccII	CGCG	4 cut(s)	442, 474, 593, 1191
AclWI	GGATC	2 cut(s)	174, 632
AcoI	YGGCCR	3 cut(s)	665, 700, 1357
AcsI	RAATTY	3 cut(s)	1096, 2017, 2193
AcuI	CTGAAG	3 cut(s)	19, 908, 1026
AcyI	GRCGYC	6 cut(s)	69, 234, 267, 558, 572, 1168
AfaI	GTAC	5 cut(s)	403, 804, 1877, 1885, 2216
AflIII	ACRYGT	1 cut(s)	805
AgsI	TTSAA	6 cut(s)	253, 1151, 1330, 1769, 1843, 2186
AjnI	CCWGG	3 cut(s)	1359, 1366, 1456
AjuI	GAANNNNNNNTTGG	2 cut(s)	1024, 1056
AluBI	AGCT	9 cut(s)	288, 313, 922, 1026, 1537, 1585, 1691, 1741, 2071
AluI	AGCT	9 cut(s)	288, 313, 922, 1026, 1537, 1585, 1691, 1741, 2071
Alw21I	GWGCWC	2 cut(s)	687, 738
Alw26I	GTCTC	6 cut(s)	19, 209, 236, 734, 752, 2037
AlwI	GGATC	2 cut(s)	174, 632
AlwNI	CAGNNNCTG	1 cut(s)	1932
Ama87I	CYCGRG	2 cut(s)	239, 2036
AoxI	GGCC	8 cut(s)	109, 227, 255, 461, 665, 700, 865, 1357
ApeKI	GCWGC	3 cut(s)	378, 1738, 2084
ApoI	RAATTY	3 cut(s)	1096, 2017, 2193
Asp700I	GAANNNNTTC	1 cut(s)	1863
Asp718I	GGTACC	1 cut(s)	1883
AspA2I	CCTAGG	1 cut(s)	106
AspLEI	GCGC	7 cut(s)	236, 269, 474, 514, 574, 877, 1170
AsuC2I	CCSGG	9 cut(s)	220, 226, 231, 247, 298, 543, 622, 790, 800
AsuHPI	GGTGA	4 cut(s)	1020, 1061, 1136, 1540
AsuII	TTCGAA	1 cut(s)	1100
AvaI	CYCGRG	2 cut(s)	239, 2036
AvaII	GGWCC	9 cut(s)	132, 222, 494, 521, 545, 713, 796, 1364, 1478
AvrII	CCTAGG	1 cut(s)	106
BaeI	ACNNNNGTAYC	2 cut(s)	1867, 1900
BalI	TGGCCA	1 cut(s)	1359
BanI	GGYRCC	7 cut(s)	233, 266, 436, 571, 676, 1167, 1883
BanII	GRGCYC	2 cut(s)	93, 778
BarI	GAAGNNNNNNTAC	2 cut(s)	623, 655
BauI	CACGAG	3 cut(s)	212, 737, 1759
BbsI	GAAGAC	1 cut(s)	67
Bbv12I	GWGCWC	2 cut(s)	687, 738
BbvCI	CCTCAGC	4 cut(s)	1197, 1203, 1665, 1687
BbvI	GCAGC	3 cut(s)	390, 1750, 2071
BccI	CCATC	7 cut(s)	266, 848, 883, 1058, 1349, 1588, 1961
BceAI	ACGGC	7 cut(s)	439, 568, 652, 680, 742, 759, 880
BciT130I	CCWGG	3 cut(s)	1361, 1368, 1458
BclI	TGATCA	2 cut(s)	1750, 1942
BcnI	CCSGG	9 cut(s)	220, 226, 231, 247, 298, 543, 622, 790, 800
BcoDI	GTCTC	6 cut(s)	19, 209, 236, 734, 752, 2037
BfaI	CTAG	4 cut(s)	107, 1023, 1938, 2120
BfmI	CTRYAG	1 cut(s)	1293
BfoI	RGCGCY	5 cut(s)	237, 270, 515, 575, 1171
BfuAI	ACCTGC	1 cut(s)	1516
BglI	GCCNNNNNGGC	1 cut(s)	460
BlnI	CCTAGG	1 cut(s)	106
Bme18I	GGWCC	9 cut(s)	132, 222, 494, 521, 545, 713, 796, 1364, 1478
BmeT110I	CYCGRG	2 cut(s)	239, 2036
BmsI	GCATC	5 cut(s)	322, 862, 1069, 1246, 1691
BoxI	GACNNNNGTC	1 cut(s)	764
BpiI	GAAGAC	1 cut(s)	67
BplI	GAGNNNNNCTC	4 cut(s)	1435, 1467, 1670, 1702
BpmI	CTGGAG	2 cut(s)	293, 413
Bpu10I	CCTNAGC	4 cut(s)	1197, 1203, 1665, 1687
Bpu14I	TTCGAA	1 cut(s)	1100
BpuEI	CTTGAG	1 cut(s)	2115
BpuMI	CCSGG	9 cut(s)	220, 226, 231, 247, 298, 543, 622, 790, 800
BsaBI	GATNNNNATC	2 cut(s)	1575, 1784
BsaHI	GRCGYC	6 cut(s)	69, 234, 267, 558, 572, 1168
BsaI	GGTCTC	4 cut(s)	209, 236, 752, 2037
BsaJI	CCNNGG	9 cut(s)	93, 106, 296, 440, 668, 789, 1360, 1385, 2037
BsaWI	WCCGGW	6 cut(s)	195, 491, 518, 547, 1153, 1480
BsaXI	ACNNNNNCTCC	6 cut(s)	815, 845, 1381, 1411, 1430, 1460
Bse118I	RCCGGY	4 cut(s)	433, 679, 718, 1170
Bse1I	ACTGG	1 cut(s)	769
Bse3DI	GCAATG	2 cut(s)	1279, 1733
Bse8I	GATNNNNATC	2 cut(s)	1575, 1784
BseBI	CCWGG	3 cut(s)	1361, 1368, 1458
BseDI	CCNNGG	9 cut(s)	93, 106, 296, 440, 668, 789, 1360, 1385, 2037
BseGI	GGATG	7 cut(s)	46, 1084, 1258, 1360, 1633, 1682, 2124
BseJI	GATNNNNATC	2 cut(s)	1575, 1784
BseMI	GCAATG	2 cut(s)	1279, 1733
BseMII	CTCAG	7 cut(s)	173, 330, 1188, 1194, 1656, 1668, 1701
BseNI	ACTGG	1 cut(s)	769
BseRI	GAGGAG	8 cut(s)	16, 616, 746, 836, 971, 1177, 1454, 2081
BseX3I	CGGCCG	2 cut(s)	665, 700
BseXI	GCAGC	3 cut(s)	390, 1750, 2071
BsgI	GTGCAG	1 cut(s)	2034
Bsh1236I	CGCG	4 cut(s)	442, 474, 593, 1191
Bsh1285I	CGRYCG	3 cut(s)	668, 703, 1485
BshFI	GGCC	8 cut(s)	111, 229, 257, 463, 667, 702, 867, 1359
BshNI	GGYRCC	7 cut(s)	233, 266, 436, 571, 676, 1167, 1883
BsiEI	CGRYCG	3 cut(s)	668, 703, 1485
BsiHKAI	GWGCWC	2 cut(s)	687, 738
BsiHKCI	CYCGRG	2 cut(s)	239, 2036
BslFI	GGGAC	1 cut(s)	726
BsmAI	GTCTC	6 cut(s)	19, 209, 236, 734, 752, 2037
BsmBI	CGTCTC	1 cut(s)	734
BsmFI	GGGAC	1 cut(s)	726
BsnI	GGCC	8 cut(s)	111, 229, 257, 463, 667, 702, 867, 1359
Bso31I	GGTCTC	4 cut(s)	209, 236, 752, 2037
BsoBI	CYCGRG	2 cut(s)	239, 2036
Bsp119I	TTCGAA	1 cut(s)	1100
Bsp1286I	GDGCHC	4 cut(s)	93, 687, 738, 778
Bsp143I	GATC	8 cut(s)	38, 166, 624, 1126, 1486, 1750, 1942, 2137
BspANI	GGCC	8 cut(s)	111, 229, 257, 463, 667, 702, 867, 1359
BspCNI	CTCAG	7 cut(s)	172, 331, 1189, 1195, 1657, 1669, 1700
BspFNI	CGCG	4 cut(s)	442, 474, 593, 1191
BspHI	TCATGA	1 cut(s)	1489
BspMAI	CTGCAG	1 cut(s)	1297
BspMI	ACCTGC	1 cut(s)	1516
BspPI	GGATC	2 cut(s)	174, 632
BspT104I	TTCGAA	1 cut(s)	1100
BspT107I	GGYRCC	7 cut(s)	233, 266, 436, 571, 676, 1167, 1883
BspTNI	GGTCTC	4 cut(s)	209, 236, 752, 2037
BsrBI	CCGCTC	3 cut(s)	140, 526, 577
BsrDI	GCAATG	2 cut(s)	1279, 1733
BsrFI	RCCGGY	4 cut(s)	433, 679, 718, 1170
BsrI	ACTGG	1 cut(s)	769
BssAI	RCCGGY	4 cut(s)	433, 679, 718, 1170
BssECI	CCNNGG	9 cut(s)	93, 106, 296, 440, 668, 789, 1360, 1385, 2037
BssMI	GATC	8 cut(s)	38, 166, 624, 1126, 1486, 1750, 1942, 2137
BssNI	GRCGYC	6 cut(s)	69, 234, 267, 558, 572, 1168
BssSI	CACGAG	3 cut(s)	212, 737, 1759
BssT1I	CCWWGG	2 cut(s)	93, 106
Bst2BI	CACGAG	3 cut(s)	212, 737, 1759
Bst2UI	CCWGG	3 cut(s)	1361, 1368, 1458
Bst4CI	ACNGT	6 cut(s)	304, 353, 905, 1267, 1817, 2167
Bst6I	CTCTTC	1 cut(s)	593
BstACI	GRCGYC	6 cut(s)	69, 234, 267, 558, 572, 1168
BstBI	TTCGAA	1 cut(s)	1100
BstC8I	GCNNGC	7 cut(s)	142, 452, 1119, 1172, 1288, 1539, 1587
BstDEI	CTNAG	9 cut(s)	159, 339, 1197, 1203, 1344, 1665, 1677, 1687, 1985
BstDSI	CCRYGG	3 cut(s)	440, 668, 1385
BstENI	CCTNNNNNAGG	1 cut(s)	2063
BstF5I	GGATG	7 cut(s)	46, 1084, 1258, 1360, 1633, 1682, 2124
BstFNI	CGCG	4 cut(s)	442, 474, 593, 1191
BstH2I	RGCGCY	5 cut(s)	237, 270, 515, 575, 1171
BstHHI	GCGC	7 cut(s)	236, 269, 474, 514, 574, 877, 1170
BstKTI	GATC	8 cut(s)	41, 169, 627, 1129, 1489, 1753, 1945, 2140
BstMAI	GTCTC	6 cut(s)	19, 209, 236, 734, 752, 2037
BstMBI	GATC	8 cut(s)	38, 166, 624, 1126, 1486, 1750, 1942, 2137
BstMCI	CGRYCG	3 cut(s)	668, 703, 1485
BstNI	CCWGG	3 cut(s)	1361, 1368, 1458
BstNSI	RCATGY	1 cut(s)	809
BstPAI	GACNNNNGTC	1 cut(s)	764
BstSFI	CTRYAG	1 cut(s)	1293
BstUI	CGCG	4 cut(s)	442, 474, 593, 1191
BstV1I	GCAGC	3 cut(s)	390, 1750, 2071
BstV2I	GAAGAC	1 cut(s)	67
BstXI	CCANNNNNNTGG	1 cut(s)	1367
BstZI	CGGCCG	2 cut(s)	665, 700
BsuRI	GGCC	8 cut(s)	111, 229, 257, 463, 667, 702, 867, 1359
BtgI	CCRYGG	3 cut(s)	440, 668, 1385
BtgZI	GCGATG	1 cut(s)	1713
BtsCI	GGATG	7 cut(s)	46, 1084, 1258, 1360, 1633, 1682, 2124
BtsIMutI	CAGTG	4 cut(s)	283, 336, 776, 1746
BveI	ACCTGC	1 cut(s)	1516
Cac8I	GCNNGC	7 cut(s)	142, 452, 1119, 1172, 1288, 1539, 1587
CaiI	CAGNNNCTG	1 cut(s)	1932
CciI	TCATGA	1 cut(s)	1489
CfoI	GCGC	7 cut(s)	236, 269, 474, 514, 574, 877, 1170
Cfr10I	RCCGGY	4 cut(s)	433, 679, 718, 1170
Cfr42I	CCGCGG	1 cut(s)	443
CpoI	CGGWCCG	3 cut(s)	494, 521, 545
Csp6I	GTAC	5 cut(s)	402, 803, 1876, 1884, 2215
CspCI	CAANNNNNGTGG	2 cut(s)	650, 685
CspI	CGGWCCG	3 cut(s)	494, 521, 545
CviAII	CATG	6 cut(s)	806, 1490, 1602, 1902, 2009, 2111
CviQI	GTAC	5 cut(s)	402, 803, 1876, 1884, 2215
DdeI	CTNAG	9 cut(s)	159, 339, 1197, 1203, 1344, 1665, 1677, 1687, 1985
DinI	GGCGCC	4 cut(s)	235, 268, 573, 1169
DpnI	GATC	8 cut(s)	40, 168, 626, 1128, 1488, 1752, 1944, 2139
DpnII	GATC	8 cut(s)	38, 166, 624, 1126, 1486, 1750, 1942, 2137
DrdI	GACNNNNNNGTC	1 cut(s)	557
DseDI	GACNNNNNNGTC	1 cut(s)	557
EaeI	YGGCCR	3 cut(s)	665, 700, 1357
EagI	CGGCCG	2 cut(s)	665, 700
Eam1104I	CTCTTC	1 cut(s)	593
EarI	CTCTTC	1 cut(s)	593
EciI	GGCGGA	3 cut(s)	70, 381, 1443
EclXI	CGGCCG	2 cut(s)	665, 700
Eco130I	CCWWGG	2 cut(s)	93, 106
Eco24I	GRGCYC	2 cut(s)	93, 778
Eco31I	GGTCTC	4 cut(s)	209, 236, 752, 2037
Eco47I	GGWCC	9 cut(s)	132, 222, 494, 521, 545, 713, 796, 1364, 1478
Eco52I	CGGCCG	2 cut(s)	665, 700
Eco57I	CTGAAG	3 cut(s)	19, 908, 1026
Eco88I	CYCGRG	2 cut(s)	239, 2036
EcoNI	CCTNNNNNAGG	1 cut(s)	2063
EcoO109I	RGGNCCY	2 cut(s)	132, 1364
EcoRI	GAATTC	1 cut(s)	1096
EcoRII	CCWGG	3 cut(s)	1359, 1366, 1456
EcoT14I	CCWWGG	2 cut(s)	93, 106
EcoT38I	GRGCYC	2 cut(s)	93, 778
EgeI	GGCGCC	4 cut(s)	235, 268, 573, 1169
EheI	GGCGCC	4 cut(s)	235, 268, 573, 1169
ErhI	CCWWGG	2 cut(s)	93, 106
Esp3I	CGTCTC	1 cut(s)	734
FaeI	CATG	6 cut(s)	809, 1493, 1605, 1905, 2012, 2114
FaqI	GGGAC	1 cut(s)	726
FatI	CATG	6 cut(s)	805, 1489, 1601, 1901, 2008, 2110
FauI	CCCGC	4 cut(s)	435, 470, 546, 1114
FbaI	TGATCA	2 cut(s)	1750, 1942
FokI	GGATG	7 cut(s)	33, 1091, 1265, 1367, 1640, 1669, 2111
FriOI	GRGCYC	2 cut(s)	93, 778
FspBI	CTAG	4 cut(s)	107, 1023, 1938, 2120
GlaI	GCGC	7 cut(s)	235, 268, 473, 513, 573, 876, 1169
GsuI	CTGGAG	2 cut(s)	293, 413
HaeII	RGCGCY	5 cut(s)	237, 270, 515, 575, 1171
HaeIII	GGCC	8 cut(s)	111, 229, 257, 463, 667, 702, 867, 1359
HhaI	GCGC	7 cut(s)	236, 269, 474, 514, 574, 877, 1170
Hin1I	GRCGYC	6 cut(s)	69, 234, 267, 558, 572, 1168
Hin1II	CATG	6 cut(s)	809, 1493, 1605, 1905, 2012, 2114
Hin6I	GCGC	7 cut(s)	234, 267, 472, 512, 572, 875, 1168
HinP1I	GCGC	7 cut(s)	234, 267, 472, 512, 572, 875, 1168
HinfI	GANTC	7 cut(s)	12, 530, 895, 1102, 1785, 1929, 1954
HphI	GGTGA	4 cut(s)	1020, 1061, 1136, 1540
Hpy166II	GTNNAC	3 cut(s)	349, 562, 1746
Hpy8I	GTNNAC	3 cut(s)	349, 562, 1746
Hpy99I	CGWCG	7 cut(s)	71, 74, 332, 409, 412, 460, 560
HpyCH4III	ACNGT	6 cut(s)	304, 353, 905, 1267, 1817, 2167
HpyCH4IV	ACGT	3 cut(s)	69, 404, 558
HpyCH4V	TGCA	5 cut(s)	1295, 1525, 1738, 2051, 2087
HpyF3I	CTNAG	9 cut(s)	159, 339, 1197, 1203, 1344, 1665, 1677, 1687, 1985
HpySE526I	ACGT	3 cut(s)	69, 404, 558
Hsp92I	GRCGYC	6 cut(s)	69, 234, 267, 558, 572, 1168
Hsp92II	CATG	6 cut(s)	809, 1493, 1605, 1905, 2012, 2114
HspAI	GCGC	7 cut(s)	234, 267, 472, 512, 572, 875, 1168
KasI	GGCGCC	4 cut(s)	233, 266, 571, 1167
KpnI	GGTACC	1 cut(s)	1887
KroI	GCCGGC	1 cut(s)	1170
KroNI	GCCGGC	1 cut(s)	1172
Ksp22I	TGATCA	2 cut(s)	1750, 1942
KspI	CCGCGG	1 cut(s)	443
Kzo9I	GATC	8 cut(s)	38, 166, 624, 1126, 1486, 1750, 1942, 2137
LmnI	GCTCC	9 cut(s)	293, 469, 733, 823, 1456, 1534, 1711, 1852, 2068
Lsp1109I	GCAGC	3 cut(s)	390, 1750, 2071
LweI	GCATC	5 cut(s)	322, 862, 1069, 1246, 1691
MaeI	CTAG	4 cut(s)	107, 1023, 1938, 2120
MaeII	ACGT	3 cut(s)	69, 404, 558
MaeIII	GTNAC	4 cut(s)	1141, 1182, 1528, 2161
MalI	GATC	8 cut(s)	40, 168, 626, 1128, 1488, 1752, 1944, 2139
MbiI	CCGCTC	3 cut(s)	140, 526, 577
MboI	GATC	8 cut(s)	38, 166, 624, 1126, 1486, 1750, 1942, 2137
MboII	GAAGA	9 cut(s)	67, 607, 610, 619, 667, 1643, 1781, 1784, 2202
MhlI	GDGCHC	4 cut(s)	93, 687, 738, 778
MlsI	TGGCCA	1 cut(s)	1359
MluCI	AATT	8 cut(s)	691, 1059, 1096, 1325, 1493, 2017, 2114, 2193
MluNI	TGGCCA	1 cut(s)	1359
Mly113I	GGCGCC	4 cut(s)	234, 267, 572, 1168
MlyI	GAGTC	3 cut(s)	21, 524, 1923
MmeI	TCCRAC	3 cut(s)	74, 144, 210
Mox20I	TGGCCA	1 cut(s)	1359
MroNI	GCCGGC	1 cut(s)	1170
MroXI	GAANNNNTTC	1 cut(s)	1863
MscI	TGGCCA	1 cut(s)	1359
MseI	TTAA	2 cut(s)	861, 1011
MslI	CAYNNNNRTG	3 cut(s)	1353, 1803, 2157
Msp20I	TGGCCA	1 cut(s)	1359
MspA1I	CMGCKG	3 cut(s)	442, 1691, 1741
MvaI	CCWGG	3 cut(s)	1361, 1368, 1458
MvnI	CGCG	4 cut(s)	442, 474, 593, 1191
NaeI	GCCGGC	1 cut(s)	1172
NarI	GGCGCC	4 cut(s)	234, 267, 572, 1168
NciI	CCSGG	9 cut(s)	220, 226, 231, 247, 298, 543, 622, 790, 800
NdeII	GATC	8 cut(s)	38, 166, 624, 1126, 1486, 1750, 1942, 2137
NgoMIV	GCCGGC	1 cut(s)	1170
NlaIII	CATG	6 cut(s)	809, 1493, 1605, 1905, 2012, 2114
NmeAIII	GCCGAG	2 cut(s)	548, 558
NmuCI	GTSAC	2 cut(s)	1141, 1528
NspI	RCATGY	1 cut(s)	809
NspV	TTCGAA	1 cut(s)	1100
PagI	TCATGA	1 cut(s)	1489
PaqCI	CACCTGC	1 cut(s)	1516
PciI	ACATGT	1 cut(s)	805
PdiI	GCCGGC	1 cut(s)	1172
PdmI	GAANNNNTTC	1 cut(s)	1863
PfeI	GAWTC	4 cut(s)	895, 1102, 1785, 1954
PflFI	GACNNNGTC	1 cut(s)	71
PfoI	TCCNGGA	1 cut(s)	620
PleI	GAGTC	3 cut(s)	20, 524, 1923
PluTI	GGCGCC	4 cut(s)	237, 270, 575, 1171
PpsI	GAGTC	3 cut(s)	20, 524, 1923
PpuMI	RGGWCCY	2 cut(s)	132, 1364
PscI	ACATGT	1 cut(s)	805
PshAI	GACNNNNGTC	1 cut(s)	764
Psp5II	RGGWCCY	2 cut(s)	132, 1364
Psp6I	CCWGG	3 cut(s)	1359, 1366, 1456
PspGI	CCWGG	3 cut(s)	1359, 1366, 1456
PspPPI	RGGWCCY	2 cut(s)	132, 1364
PstI	CTGCAG	1 cut(s)	1297
PstNI	CAGNNNCTG	1 cut(s)	1932
PsyI	GACNNNGTC	1 cut(s)	71
PvuII	CAGCTG	2 cut(s)	1691, 1741
RsaI	GTAC	5 cut(s)	403, 804, 1877, 1885, 2216
RsaNI	GTAC	5 cut(s)	402, 803, 1876, 1884, 2215
RseI	CAYNNNNRTG	3 cut(s)	1353, 1803, 2157
Rsr2I	CGGWCCG	3 cut(s)	494, 521, 545
RsrII	CGGWCCG	3 cut(s)	494, 521, 545
SacII	CCGCGG	1 cut(s)	443
SaqAI	TTAA	2 cut(s)	861, 1011
Sau3AI	GATC	8 cut(s)	38, 166, 624, 1126, 1486, 1750, 1942, 2137
SchI	GAGTC	3 cut(s)	21, 524, 1923
SduI	GDGCHC	4 cut(s)	93, 687, 738, 778
SfaNI	GCATC	5 cut(s)	322, 862, 1069, 1246, 1691
SfcI	CTRYAG	1 cut(s)	1293
SfoI	GGCGCC	4 cut(s)	235, 268, 573, 1169
Sfr303I	CCGCGG	1 cut(s)	443
SfuI	TTCGAA	1 cut(s)	1100
SgrAI	CRCCGGYG	1 cut(s)	718
SgrBI	CCGCGG	1 cut(s)	443
SinI	GGWCC	9 cut(s)	132, 222, 494, 521, 545, 713, 796, 1364, 1478
SmiMI	CAYNNNNRTG	3 cut(s)	1353, 1803, 2157
SmlI	CTYRAG	1 cut(s)	2130
SmoI	CTYRAG	1 cut(s)	2130
Sse9I	AATT	8 cut(s)	691, 1059, 1096, 1325, 1493, 2017, 2114, 2193
SspDI	GGCGCC	4 cut(s)	233, 266, 571, 1167
SspI	AATATT	1 cut(s)	322
SspMI	CTAG	4 cut(s)	107, 1023, 1938, 2120
StyI	CCWWGG	2 cut(s)	93, 106
TaaI	ACNGT	6 cut(s)	304, 353, 905, 1267, 1817, 2167
TaiI	ACGT	3 cut(s)	72, 407, 561
TaqI	TCGA	8 cut(s)	396, 528, 533, 651, 1094, 1100, 1322, 1485
TasI	AATT	8 cut(s)	691, 1059, 1096, 1325, 1493, 2017, 2114, 2193
TatI	WGTACW	1 cut(s)	1875
TauI	GCSGC	8 cut(s)	208, 211, 366, 442, 477, 577, 702, 1733
TfiI	GAWTC	4 cut(s)	895, 1102, 1785, 1954
Tru1I	TTAA	2 cut(s)	861, 1011
Tru9I	TTAA	2 cut(s)	861, 1011
TscAI	CASTG	4 cut(s)	283, 343, 776, 1753
TseFI	GTSAC	2 cut(s)	1141, 1528
TseI	GCWGC	3 cut(s)	378, 1738, 2084
Tsp45I	GTSAC	2 cut(s)	1141, 1528
TspDTI	ATGAA	5 cut(s)	1506, 1644, 1809, 1950, 2127
TspGWI	ACGGA	4 cut(s)	262, 1374, 1547, 2069
TspRI	CASTG	4 cut(s)	283, 343, 776, 1753
Tth111I	GACNNNGTC	1 cut(s)	71
VpaK11BI	GGWCC	9 cut(s)	132, 222, 494, 521, 545, 713, 796, 1364, 1478
XagI	CCTNNNNNAGG	1 cut(s)	2063
XapI	RAATTY	3 cut(s)	1096, 2017, 2193
XceI	RCATGY	1 cut(s)	809
XmaJI	CCTAGG	1 cut(s)	106
XmnI	GAANNNNTTC	1 cut(s)	1863
XspI	CTAG	4 cut(s)	107, 1023, 1938, 2120
ZraI	GACGTC	2 cut(s)	70, 559

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.