Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0017079

Physical Location & Seq

Genomic Coordinates Forward (+)

4439872 .. 4442088

Gene Structure 2217 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGCTTCGCCGCCTTGCCATTTTTACCCACCAAGTTCTCACAAATTCCAATTCTATCCTCCCCACCACCACCAAGCACAACAGCACCTTCTTCCTCTGCTCCCATTTCAACCCCTCATGTCACAGGGGCAATGGGTTCGCCTCAATTCGCTTACTTTCGTACTCTCCTATGAACCGCCGCATACCTGATCCCGAAGACCCCTCGAATTTGATAAAAGAAGATGGCGTTTCTGTTTTATCCCAAATGTGGATTGAGAATTTTCGTGAACCTGATAGGATTGTGACTAATTTGTCCTCTTACCTTCGCCGATTCGAGTTGTGGGTATTGGCGTACCAGAAGGTTTGCGCCGACGAGATGGGTGCGTATATGCCCCGCAGTGAAATACAGAGGTCAGCGCTTGAGGACTTGTTAGCGCTTCGTAATGCTGTTCTTGACAGTAGGTTTAGGTGGGGTGCTAGACTAGAGTTCTTTATTAAATCACCCAAGGATAAGACTGAATACGAGTCTTTGTCTAAGAGGAAAATTAAGGCCATTCTGACGACTACACAACCGGCCCCATTTCAAGATAAGTTAGTGCAGGAAGTTCTGTTAATGATTTTGGAGCCAATATATGAGGGTCGGTTCTCTCAAAAGTCATTTGCGTTTAGGCCGGGGAGGAATGCACATACAGTGTTGAGGGTGATTAGGAGGAGTTTTGCAGGGTACTTGTGGTATATAAAGGGCGATTTGAGTACTATATTGGATGGGATGAAGGTGGGTTTGGTGATAAATGCTTTGATCAGGGATGTCAGGGATAAGAAGATCATTGATTTGGTGAAGGCGGCGTTGGTTACACCAGTGGTTACGAGTAAGGATGATGGAGTGGAGAAGAAGAAAAAGAAGAGAAAATATCAGAAGAAGAGGGTGTTGGCAGAGGATGAGCCGAAACCAGACCCATATTGGTTGGAGACTTTTTTTGGGTTTGCACCTGAGGAGGCAGAGAAGCTTCCTTCTTGGGGCCATTGTGGGATACTTAGCCCCCTTTTGGCTAATGTTTGTTTGGATGAACTGGACCGCTGGATGGAGGGGAAGATTAAGGACTTTTATCATCCGTCAAAGAGTGATGTCATATGGAATAGCCCGGAAGGTGAAGCAGAACATGGAAATACATCTTGGCCTGAATTTGTGCCAACAAGTGGCCCAGATAAGACCAGAAAGATGGATTACATTCGATATGGTGGTCATATTTTAATTGGTGTTCGAGGACCTCGATCAGATGCTGCCACATTGAGAAAACAGTTGATTGAGTTTGTTGATCAGAAGTATATGCTCAAGCTTGACAATGAGAGCCTCCCTATAGAACACATAACAAAGGGCATAATGTTTCTAGATCATGTGTTGTGTCGCAGAGTTGTGTACCCAACGCTTCGTTACACTGCTACTGGTGGGAAAATCATTAGTGAGAAGGGTGTAGGCACTCTTTTATCAGTTACAGCAAGCTTGAAACAGTGCATCAAGCAATTTAGGAAGTTGAGCTTTCTTAAGGGAGACAGGGATCCAGACCCACAACCTTGTTTCAGAATGTTTCATGCCACCCAAGCTCATACTAATGCACAAATGAACAAGTTTCTGTCCACAATGGTTGAGTGGCATAGATTTGCAGATAACCGGAAAAAAATTGTGAACTTTTGCTCTTACATTTTAAGGGGTTCACTTGCGAAGCTCTATGCAGCAAAGTACAAGCTCCGTTCACGTGCAAAGGTGTACAAGATTGGTTCGAGGAATCTGAGTCGTCCTTTGAAGGAGAAGAAGGGGCAGTCACCAGAGTACCATAATTTGTTGAGGATGGGTCTTGCCGAGTCAATTGATGGGCTTCAGTATACCAGGATGTCTCTTGTTCCTGAGACAGATTACAGCCCTTTCCCAAGTAACTGGAGGCCCGATCATGAGAAGGCACTACTTGAATATATAAGGCTTGATGATCCAAAAACTATTGAGGAGCAGCGTAGGTGCATCATGGACCAAGGTCTTGTTTCACCTCAGGATTACGTTTCAATGCTTGTTTGGAACTACAAAAGGAATGCTGGCACATTGGATCAACTTTCCTTGGTCAATAGTGGTAGCACTAACATTGAAAGAGATAAACTATTGTTGCCGGGATCGAACGAGGATAAACTTGAGCATAGGACTAAAGAAGAGGAGGAAAATGATAAACAGTTTTGTGTATCACAGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0000959 GO:0000963 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090615 GO:0140053 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Intron_maturas2 RVT_1

Protein Analysis

739

Amino Acids

85.15

Weight (kDa)

9.37

Isoelectric Point (pI)

48.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Intron_maturas2	PF01348	490 - 594	5e-08	Type II intron maturase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0017079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46920
fragaria_vesca	FvH4_5g21000
malus_domestica	MD06G1041700.v1.1
prunus_persica	Prupe.5G048500_v2.0.a1
pyrus_communis	pycom06g03520
rosa_chinensis	RchiOBHm_Chr7g0208021
rosa_laevigata	RLG00000003262
rosa_roxburghii	Rroxscaffold_3G00250890
rosa_rugosa	Rorug07G0100900
rosa_samantha	Rh7AG235100 Rh7BG230400 Rh7CG250000 Rh7DG241000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	289
AccB7I	CCANNNNNTGG	1 cut(s)	1175
AccI	GTMKAC	1 cut(s)	1859
AciI	CCGC	6 cut(s)	10, 175, 178, 373, 821, 1054
AclWI	GGATC	6 cut(s)	182, 1529, 1542, 1955, 2082, 2146
AcsI	RAATTY	4 cut(s)	43, 205, 256, 1160
AcuI	CTGAAG	1 cut(s)	1838
AcvI	CACGTG	1 cut(s)	1733
AfaI	GTAC	8 cut(s)	161, 332, 704, 733, 1397, 1718, 1745, 1808
AfeI	AGCGCT	2 cut(s)	396, 414
AfiI	CCNNNNNNNGG	5 cut(s)	246, 995, 1024, 1060, 1175
AflII	CTTAAG	1 cut(s)	1520
AgsI	TTSAA	7 cut(s)	109, 563, 1483, 1780, 1943, 2034, 2114
AjnI	CCWGG	1 cut(s)	1862
AjuI	GAANNNNNNNTTGG	8 cut(s)	743, 775, 809, 841, 890, 922, 1135, 1167
AluBI	AGCT	7 cut(s)	985, 1315, 1479, 1515, 1580, 1702, 1723
AluI	AGCT	7 cut(s)	985, 1315, 1479, 1515, 1580, 1702, 1723
Alw26I	GTCTC	4 cut(s)	941, 1521, 1875, 1877
AlwI	GGATC	6 cut(s)	182, 1529, 1542, 1955, 2082, 2146
AlwNI	CAGNNNCTG	1 cut(s)	1259
Aor51HI	AGCGCT	2 cut(s)	396, 414
AoxI	GGCC	7 cut(s)	528, 552, 647, 997, 1154, 1177, 1916
ApeKI	GCWGC	3 cut(s)	1259, 1709, 1981
ApoI	RAATTY	4 cut(s)	43, 205, 256, 1160
AspLEI	GCGC	3 cut(s)	347, 397, 415
AspS9I	GGNCC	7 cut(s)	553, 997, 1051, 1178, 1244, 1917, 1999
AsuC2I	CCSGG	3 cut(s)	651, 1121, 2136
AsuHPI	GGTGA	7 cut(s)	471, 691, 775, 826, 1139, 1791, 2007
AvaII	GGWCC	3 cut(s)	1051, 1244, 1999
AxyI	CCTNAGG	2 cut(s)	969, 2019
BaeI	ACNNNNGTAYC	2 cut(s)	1790, 1823
BamHI	GGATCC	1 cut(s)	1534
BbrPI	CACGTG	1 cut(s)	1733
BbsI	GAAGAC	1 cut(s)	201
BbvI	GCAGC	3 cut(s)	1246, 1721, 1993
BccI	CCATC	8 cut(s)	215, 349, 737, 851, 1054, 1192, 1819, 1841
BcgI	CGANNNNNNTGC	4 cut(s)	118, 152, 341, 375
BciT130I	CCWGG	1 cut(s)	1864
BciVI	GTATCC	1 cut(s)	1002
BclI	TGATCA	2 cut(s)	777, 1294
BcnI	CCSGG	3 cut(s)	651, 1121, 2136
BcoDI	GTCTC	4 cut(s)	941, 1521, 1875, 1877
BfaI	CTAG	3 cut(s)	456, 461, 1367
BfmI	CTRYAG	1 cut(s)	1335
BfoI	RGCGCY	2 cut(s)	398, 416
BfrI	CTTAAG	1 cut(s)	1520
BfuI	GTATCC	1 cut(s)	1002
BisI	GCNGC	6 cut(s)	10, 178, 822, 1260, 1710, 1982
BlsI	GCNGC	6 cut(s)	11, 179, 823, 1261, 1711, 1983
BmcAI	AGTACT	1 cut(s)	733
Bme1390I	CCNGG	4 cut(s)	651, 1121, 1864, 2136
Bme18I	GGWCC	3 cut(s)	1051, 1244, 1999
BmgT120I	GGNCC	7 cut(s)	553, 997, 1051, 1178, 1244, 1917, 1999
BmiI	GGNNCC	4 cut(s)	555, 603, 998, 1536
BmrFI	CCNGG	4 cut(s)	651, 1121, 1864, 2136
BmsI	GCATC	3 cut(s)	1246, 1500, 2001
BoxI	GACNNNNGTC	1 cut(s)	2004
BpiI	GAAGAC	1 cut(s)	201
BpmI	CTGGAG	1 cut(s)	1933
BpuEI	CTTGAG	3 cut(s)	419, 1295, 2177
BpuMI	CCSGG	3 cut(s)	651, 1121, 2136
BsaAI	YACGTR	1 cut(s)	1733
BsaJI	CCNNGG	4 cut(s)	483, 650, 2002, 2085
BsaWI	WCCGGW	1 cut(s)	1647
Bsc4I	CCNNNNNNNGG	5 cut(s)	246, 995, 1024, 1060, 1175
Bse118I	RCCGGY	1 cut(s)	550
Bse1I	ACTGG	4 cut(s)	836, 1053, 1426, 1916
Bse21I	CCTNAGG	2 cut(s)	969, 2019
Bse3DI	GCAATG	1 cut(s)	136
BseBI	CCWGG	1 cut(s)	1864
BseDI	CCNNGG	4 cut(s)	483, 650, 2002, 2085
BseLI	CCNNNNNNNGG	5 cut(s)	246, 995, 1024, 1060, 1175
BseMI	GCAATG	1 cut(s)	136
BseMII	CTCAG	4 cut(s)	960, 1757, 1872, 2033
BseNI	ACTGG	4 cut(s)	836, 1053, 1426, 1916
BseRI	GAGGAG	4 cut(s)	703, 986, 1991, 2192
BseXI	GCAGC	3 cut(s)	1246, 1721, 1993
BsgI	GTGCAG	1 cut(s)	596
BshFI	GGCC	7 cut(s)	530, 554, 649, 999, 1156, 1179, 1918
BsiSI	CCGG	5 cut(s)	551, 650, 1121, 1648, 2135
BslI	CCNNNNNNNGG	5 cut(s)	246, 995, 1024, 1060, 1175
BsmAI	GTCTC	4 cut(s)	941, 1521, 1875, 1877
BsmI	GAATGC	2 cut(s)	664, 2065
BsnI	GGCC	7 cut(s)	530, 554, 649, 999, 1156, 1179, 1918
Bsp1407I	TGTACA	1 cut(s)	1743
BspACI	CCGC	6 cut(s)	10, 175, 178, 373, 821, 1054
BspANI	GGCC	7 cut(s)	530, 554, 649, 999, 1156, 1179, 1918
BspCNI	CTCAG	4 cut(s)	961, 1758, 1873, 2032
BspHI	TCATGA	1 cut(s)	1924
BspLI	GGNNCC	4 cut(s)	555, 603, 998, 1536
BspPI	GGATC	6 cut(s)	182, 1529, 1542, 1955, 2082, 2146
BspTI	CTTAAG	1 cut(s)	1520
BsrDI	GCAATG	1 cut(s)	136
BsrFI	RCCGGY	1 cut(s)	550
BsrGI	TGTACA	1 cut(s)	1743
BsrI	ACTGG	4 cut(s)	836, 1053, 1426, 1916
BssAI	RCCGGY	1 cut(s)	550
BssECI	CCNNGG	4 cut(s)	483, 650, 2002, 2085
BssNAI	GTATAC	1 cut(s)	1860
BssT1I	CCWWGG	3 cut(s)	483, 2002, 2085
Bst1107I	GTATAC	1 cut(s)	1860
Bst2UI	CCWGG	1 cut(s)	1864
Bst4CI	ACNGT	5 cut(s)	437, 670, 1278, 1488, 2196
Bst6I	CTCTTC	3 cut(s)	875, 893, 2169
BstAFI	CTTAAG	1 cut(s)	1520
BstAUI	TGTACA	1 cut(s)	1743
BstBAI	YACGTR	1 cut(s)	1733
BstC8I	GCNNGC	2 cut(s)	1477, 2065
BstDEI	CTNAG	6 cut(s)	513, 969, 1013, 1766, 1881, 2019
BstH2I	RGCGCY	2 cut(s)	398, 416
BstHHI	GCGC	3 cut(s)	347, 397, 415
BstMAI	GTCTC	4 cut(s)	941, 1521, 1875, 1877
BstMWI	GCNNNNNNNGC	1 cut(s)	1577
BstNI	CCWGG	1 cut(s)	1864
BstPAI	GACNNNNGTC	1 cut(s)	2004
BstSCI	CCNGG	4 cut(s)	649, 1119, 1862, 2134
BstSFI	CTRYAG	1 cut(s)	1335
BstV1I	GCAGC	3 cut(s)	1246, 1721, 1993
BstV2I	GAAGAC	1 cut(s)	201
BstX2I	RGATCY	1 cut(s)	1534
BstXI	CCANNNNNNTGG	2 cut(s)	1198, 1911
BstYI	RGATCY	1 cut(s)	1534
BstZ17I	GTATAC	1 cut(s)	1860
Bsu36I	CCTNAGG	2 cut(s)	969, 2019
BsuI	GTATCC	1 cut(s)	1002
BsuRI	GGCC	7 cut(s)	530, 554, 649, 999, 1156, 1179, 1918
BtsI	GCAGTG	2 cut(s)	382, 1413
BtsIMutI	CAGTG	5 cut(s)	382, 675, 843, 1413, 1493
Cac8I	GCNNGC	2 cut(s)	1477, 2065
CaiI	CAGNNNCTG	1 cut(s)	1259
CciI	TCATGA	1 cut(s)	1924
CfoI	GCGC	3 cut(s)	347, 397, 415
Cfr10I	RCCGGY	1 cut(s)	550
Cfr13I	GGNCC	7 cut(s)	553, 997, 1051, 1178, 1244, 1917, 1999
Csp6I	GTAC	8 cut(s)	160, 331, 703, 732, 1396, 1717, 1744, 1807
CspCI	CAANNNNNGTGG	2 cut(s)	1603, 1638
CviAII	CATG	6 cut(s)	117, 1139, 1373, 1568, 1925, 1996
CviQI	GTAC	8 cut(s)	160, 331, 703, 732, 1396, 1717, 1744, 1807
DdeI	CTNAG	6 cut(s)	513, 969, 1013, 1766, 1881, 2019
DrdI	GACNNNNNNGTC	1 cut(s)	289
DseDI	GACNNNNNNGTC	1 cut(s)	289
Eam1104I	CTCTTC	3 cut(s)	875, 893, 2169
EarI	CTCTTC	3 cut(s)	875, 893, 2169
Eco130I	CCWWGG	3 cut(s)	483, 2002, 2085
Eco47I	GGWCC	3 cut(s)	1051, 1244, 1999
Eco47III	AGCGCT	2 cut(s)	396, 414
Eco57I	CTGAAG	1 cut(s)	1838
Eco72I	CACGTG	1 cut(s)	1733
Eco81I	CCTNAGG	2 cut(s)	969, 2019
EcoO109I	RGGNCCY	1 cut(s)	1244
EcoRII	CCWGG	1 cut(s)	1862
EcoT14I	CCWWGG	3 cut(s)	483, 2002, 2085
ErhI	CCWWGG	3 cut(s)	483, 2002, 2085
FaeI	CATG	6 cut(s)	120, 1142, 1376, 1571, 1928, 1999
FalI	AAGNNNNNCTT	2 cut(s)	1499, 1531
FatI	CATG	6 cut(s)	116, 1138, 1372, 1567, 1924, 1995
FauI	CCCGC	1 cut(s)	380
FauNDI	CATATG	1 cut(s)	1109
FbaI	TGATCA	2 cut(s)	777, 1294
FblI	GTMKAC	1 cut(s)	1859
Fnu4HI	GCNGC	6 cut(s)	10, 178, 822, 1260, 1710, 1982
Fsp4HI	GCNGC	6 cut(s)	10, 178, 822, 1260, 1710, 1982
FspBI	CTAG	3 cut(s)	456, 461, 1367
GlaI	GCGC	3 cut(s)	346, 396, 414
GluI	GCNGC	6 cut(s)	10, 178, 822, 1260, 1710, 1982
GsuI	CTGGAG	1 cut(s)	1933
HaeII	RGCGCY	2 cut(s)	398, 416
HaeIII	GGCC	7 cut(s)	530, 554, 649, 999, 1156, 1179, 1918
HapII	CCGG	5 cut(s)	551, 650, 1121, 1648, 2135
HhaI	GCGC	3 cut(s)	347, 397, 415
Hin1II	CATG	6 cut(s)	120, 1142, 1376, 1571, 1928, 1999
Hin6I	GCGC	3 cut(s)	345, 395, 413
HinP1I	GCGC	3 cut(s)	345, 395, 413
HindIII	AAGCTT	3 cut(s)	983, 1313, 1477
HinfI	GANTC	5 cut(s)	309, 503, 1762, 1768, 1838
HpaII	CCGG	5 cut(s)	551, 650, 1121, 1648, 2135
HphI	GGTGA	7 cut(s)	471, 691, 775, 826, 1139, 1791, 2007
Hpy166II	GTNNAC	8 cut(s)	266, 1396, 1614, 1663, 1691, 1730, 1744, 1860
Hpy188I	TCNGA	6 cut(s)	537, 894, 1255, 1299, 1559, 1767
Hpy188III	TCNNGA	9 cut(s)	191, 263, 431, 563, 1367, 1538, 1880, 1925, 2021
Hpy8I	GTNNAC	8 cut(s)	266, 1396, 1614, 1663, 1691, 1730, 1744, 1860
Hpy99I	CGWCG	1 cut(s)	353
HpyCH4III	ACNGT	5 cut(s)	437, 670, 1278, 1488, 2196
HpyCH4IV	ACGT	2 cut(s)	1732, 2028
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1577
HpyF3I	CTNAG	6 cut(s)	513, 969, 1013, 1766, 1881, 2019
HpySE526I	ACGT	2 cut(s)	1732, 2028
Hsp92II	CATG	6 cut(s)	120, 1142, 1376, 1571, 1928, 1999
HspAI	GCGC	3 cut(s)	345, 395, 413
Ksp22I	TGATCA	2 cut(s)	777, 1294
LmnI	GCTCC	4 cut(s)	104, 601, 1728, 1978
Lsp1109I	GCAGC	3 cut(s)	1246, 1721, 1993
LweI	GCATC	3 cut(s)	1246, 1500, 2001
MaeI	CTAG	3 cut(s)	456, 461, 1367
MaeII	ACGT	2 cut(s)	1732, 2028
MaeIII	GTNAC	8 cut(s)	119, 280, 829, 841, 1409, 1468, 1797, 1907
MfeI	CAATTG	1 cut(s)	1842
MflI	RGATCY	1 cut(s)	1534
MlyI	GAGTC	3 cut(s)	512, 1777, 1847
MmeI	TCCRAC	1 cut(s)	924
MseI	TTAA	7 cut(s)	474, 525, 590, 1074, 1229, 1521, 1682
MslI	CAYNNNNRTG	1 cut(s)	1587
MspA1I	CMGCKG	1 cut(s)	1056
MspCI	CTTAAG	1 cut(s)	1520
MspI	CCGG	5 cut(s)	551, 650, 1121, 1648, 2135
MspR9I	CCNGG	4 cut(s)	651, 1121, 1864, 2136
MunI	CAATTG	1 cut(s)	1842
Mva1269I	GAATGC	2 cut(s)	664, 2065
MvaI	CCWGG	1 cut(s)	1864
MwoI	GCNNNNNNNGC	1 cut(s)	1577
NciI	CCSGG	3 cut(s)	651, 1121, 2136
NdeI	CATATG	1 cut(s)	1109
NlaIII	CATG	6 cut(s)	120, 1142, 1376, 1571, 1928, 1999
NlaIV	GGNNCC	4 cut(s)	555, 603, 998, 1536
NmeAIII	GCCGAG	1 cut(s)	1861
NmuCI	GTSAC	3 cut(s)	119, 280, 1797
PagI	TCATGA	1 cut(s)	1924
PcsI	WCGNNNNNNNCGW	1 cut(s)	1246
PctI	GAATGC	2 cut(s)	664, 2065
PfeI	GAWTC	2 cut(s)	309, 1762
PflMI	CCANNNNNTGG	1 cut(s)	1175
PkrI	GCNGC	6 cut(s)	11, 179, 823, 1261, 1711, 1983
PleI	GAGTC	3 cut(s)	511, 1776, 1846
PmaCI	CACGTG	1 cut(s)	1733
PmlI	CACGTG	1 cut(s)	1733
PpsI	GAGTC	3 cut(s)	511, 1776, 1846
Ppu21I	YACGTR	1 cut(s)	1733
PpuMI	RGGWCCY	1 cut(s)	1244
PshAI	GACNNNNGTC	1 cut(s)	2004
Psp5II	RGGWCCY	1 cut(s)	1244
Psp6I	CCWGG	1 cut(s)	1862
PspCI	CACGTG	1 cut(s)	1733
PspGI	CCWGG	1 cut(s)	1862
PspN4I	GGNNCC	4 cut(s)	555, 603, 998, 1536
PspPI	GGNCC	7 cut(s)	553, 997, 1051, 1178, 1244, 1917, 1999
PspPPI	RGGWCCY	1 cut(s)	1244
PstNI	CAGNNNCTG	1 cut(s)	1259
PsuI	RGATCY	1 cut(s)	1534
RsaI	GTAC	8 cut(s)	161, 332, 704, 733, 1397, 1718, 1745, 1808
RsaNI	GTAC	8 cut(s)	160, 331, 703, 732, 1396, 1717, 1744, 1807
RseI	CAYNNNNRTG	1 cut(s)	1587
SaqAI	TTAA	7 cut(s)	474, 525, 590, 1074, 1229, 1521, 1682
SatI	GCNGC	6 cut(s)	10, 178, 822, 1260, 1710, 1982
Sau96I	GGNCC	7 cut(s)	553, 997, 1051, 1178, 1244, 1917, 1999
ScaI	AGTACT	1 cut(s)	733
SchI	GAGTC	3 cut(s)	512, 1777, 1847
ScrFI	CCNGG	4 cut(s)	651, 1121, 1864, 2136
SfaNI	GCATC	3 cut(s)	1246, 1500, 2001
SfcI	CTRYAG	1 cut(s)	1335
SinI	GGWCC	3 cut(s)	1051, 1244, 1999
SmiMI	CAYNNNNRTG	1 cut(s)	1587
SmlI	CTYRAG	4 cut(s)	398, 1310, 1520, 2156
SmoI	CTYRAG	4 cut(s)	398, 1310, 1520, 2156
SsiI	CCGC	6 cut(s)	10, 175, 178, 373, 821, 1054
SspMI	CTAG	3 cut(s)	456, 461, 1367
StyD4I	CCNGG	4 cut(s)	649, 1119, 1862, 2134
StyI	CCWWGG	3 cut(s)	483, 2002, 2085
TaaI	ACNGT	5 cut(s)	437, 670, 1278, 1488, 2196
TaiI	ACGT	2 cut(s)	1735, 2031
TaqI	TCGA	7 cut(s)	203, 312, 1210, 1240, 1249, 1757, 2141
TatI	WGTACW	3 cut(s)	731, 1716, 1743
TauI	GCSGC	3 cut(s)	12, 180, 824
TfiI	GAWTC	2 cut(s)	309, 1762
Tru1I	TTAA	7 cut(s)	474, 525, 590, 1074, 1229, 1521, 1682
Tru9I	TTAA	7 cut(s)	474, 525, 590, 1074, 1229, 1521, 1682
TscAI	CASTG	5 cut(s)	382, 675, 843, 1420, 1493
TseFI	GTSAC	3 cut(s)	119, 280, 1797
TseI	GCWGC	3 cut(s)	1259, 1709, 1981
Tsp45I	GTSAC	3 cut(s)	119, 280, 1797
TspDTI	ATGAA	5 cut(s)	185, 764, 1059, 1556, 1613
TspGWI	ACGGA	2 cut(s)	1080, 1715
TspRI	CASTG	5 cut(s)	382, 675, 843, 1420, 1493
Van91I	CCANNNNNTGG	1 cut(s)	1175
Vha464I	CTTAAG	1 cut(s)	1520
VpaK11BI	GGWCC	3 cut(s)	1051, 1244, 1999
XapI	RAATTY	4 cut(s)	43, 205, 256, 1160
XbaI	TCTAGA	1 cut(s)	1366
XcmI	CCANNNNNNNNNTGG	1 cut(s)	936
XmiI	GTMKAC	1 cut(s)	1859
XspI	CTAG	3 cut(s)	456, 461, 1367
ZrmI	AGTACT	1 cut(s)	733

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.