pycom06g07390

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0007415
Physical Location & Seq
Forward (+)
11974864 .. 11986980
12117 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3438 bp
ATGGAGCACCACCAACCTTTGCTGCAGCGATATCGCCGTGATCGTCGCAAGCTCTTAGAATTCCTCTTTTCGTCGGGTCTCGTCCGAACGCCGTCCGGGTCAGACTCCGCCCCCGCGTCCGCCGCCTCCCTCTCCCACATCGATTTCGATACTATCAGCGCCGATTATGTCCTCGACTGCGTCAAATCTGGTGGAGTGGTGGATATATCTGAAGCAACCAAGAAGTACTTTCACGAATCTTCTTACCCTCTAATGATTCAATCCGAATTAGGGGATTCCTTTTTTCTAGTTTCTGATCCAGAATCATCTGGATCACCTCCTCGGCGTGTGCCTACTCCCGTACATGTGAACCGGACCGCTAACAATGCATCAAGTTCATCCGCACAGCTGAATTCTTTGAGTGTTGAGGACAATGAAAGGGCTGGTGATGACTATGGTTTCAAATATAGAGCCATGCCAAGTGCACCTCCAAAGCATGTTGAAGAGGTTAAAGTGCTACCGTTGGGATTGCCTCATCTAAACACAGGATTGTCTGATGATGACTTGCGGGAGTCAGCCTATGAAATATTGTTAGCATCCTTGGCAACTTCTGGGATTGTAATATGTTCAGTTGAGGATAGAAAGAAGCAAAGGAGTTCGAAATTGCTGTCACGATTGAAGAGTAGAAGGGAAACAACAAATGTGCAGTCTCAACCACTTGAAAGAGATTTACGGCTCATCCACACCATCCGTGTGCAAATGCAGATTTCAGAAGCGATGGATGAAAGCACTAGGCAAAAGTTGATGCTGTTAGCGTCAGGGAGAACGCGGGCACAAATCGATGTTCCTCAAATCTTGTTGGGGCTTGTAAATGGAACTTTTAAGTCTGATTTTCCAAATGAAAAGTCTTATATGCAGTGGAAGAATAGACAGGCAAGTATATTAGAAGAACTTCTTTGTTTTTCTGCTAACCTTGTAGCACATGATAATCGAGCTATTACGAGTGCTCTTACTATGGTCAGAAATGCAAAGGAATGGGACTTTATGTCTCTTTCCGAACGGGCTGAGGTTCTATCAGTTATCAAACAGGTGGCTTTGAAGTTCTCATCTCTTCCAGGGCACTTGGGTATCGAAAGTGAGACCTATTATTGGACTTCTGGGTATCACCTGAATATTAGACTTTATGAGAAACTACTTCTTGGTGTGTTTGATGCTCTTGATGAAGGCCAGCTAATAGCGGAAGCTGATGAGTTCCTGATGCTTTTAAAATTGACATGGTCCACTTTAGGCATCACTCAAAAAATCCATGATGCAATATATGGGTGGGTCCTTTTCCAACAGTTCGTTGAAACAGGCGAGCCTTTGCTATTAGAATATGCAACAGTGGAGTTGCTGAAACTTATATCAGCTAAAGGTGATGATAAGAAGTTGAGGCTATATAGCAATAGCCTGCTATGTTCTAGGCAGTGCAATGACAGCGAGATAAAACTTAGTTTGGTTGACGCTGTCTTCTACTCAATAAGCATCTGGTGTGAGAGCAAACTGGAAGACTATCATCTCCATTTTAGTCAGCAACCTTATCACATAAAGAGGGTGATGAGCTTATTGTCAGTAGTTGGCATTTATACTTTTGGCGATGGTGGTGATAATAAGTTGAGCAGGTTGAATATTCCAGATGAGGACACTGCTAAAATATTTGAATCTTATGTGGAAAGGTCCATTGAAGCAGCATACAGGCGGGCAGCAAGTAACGTAGAACATTTATCCAAAGTGGAAAAAAAGCATCCCTTGGAAGTACTTGCAAATGAACTCAGGTTGATATCTGAGAAAGAGTTCAATGTCTTCTACCCGGAGATATGTAAATGGTGTCCTAAATCTGTGATGATTGTGGCTATGCTATTGCACCAGATTTTTTGGGGAAGACTGAAACCATTTCTTGATGGGGTGTCATCTCTCTCTGAAGATGTTAAAGCAGTTCTTCCAGCTGCTGATTTATTGGATCATGGCCTAACTCAGCTATATAATCTTGTTGATGGAGCAAATAGCAAACATTTGCGCCATTATCCGATTGGTGAAGTTGCTAAACCTCTCATTCTTGATTGGGTGATTGCTCAGCATGAACGTATCTTGGAGTGGACTGGACGCGCATTTGATCTTGAGGAGTGGGAGCCTTTGTCGACTCAGCAAAGACAGGCAGCATCAATAATTGAAGTATTTAGAATTGTAGAAGAGAGTGTGGATCAATTTTTTGGTTTTAATCTCCCTATGGACATCACGCATTTGCAAGCTCTGTTATCTGTTGTCTTCCACACCCTGGATAACTATTTGGTGAAATTGCTCGACGAGCTAGTTGAGAAGAATCATTTATATCCATCAGCTCCTCCATTGACTCGTTACAAGGAGACGACGATTCCAGTAATGAAGAAAAAGTTGCTTGAGTGTATGCCTCTGGATGACAATGTGTACAACAGGTTGAATAGTTTGACGATACCCAGACTCTGTATCAGACTGAACACTTTAAAATATATACAGAAACAAATAGATATACTAGAAGATGGCATCAGAAAATCTTGGGCACTTGTTAGACAACCCGTTCATAAAAAATGGGACAAGGAACATTCTTCAAGAACAACATCTAATGAACAAGTCGATGAGCTCTTTGTCAACACCTTTGAAATTATCAGGGACACTGCAGCAAATGCTATCAGCAAACTTTGTGACTTTACTGCTGCAAGAATCGTGTTCTGGGATCTCAGACATGCATTCCTTTTTGGTTTGTACTGTGGTAATGTTGAAGGTGCTCGTTTGGATGGTGTTCTTTCACATATTGATGCTGTCCTTGGCCATGTATGTGGGTTTATTGAAGACTCTCTTCGAGATGCTGTGGTTTCAAGCATTTGTCGGGCATCACTGGAAGGCTTTGCATGGGTGCTGCTCGATGGAGGGCCTTCTCGTGCATTTAGTGATTCAGATATTGCACTGATGGAGGATGACCTGACCACACTAAAGGAATTTTTCGTAGCTGATGGAGAAGGCCTTCCTCGATCACTAGTGGAGCAGGAAGCAAAATTGGCTGAGCAGATACTGAACTTGTATTCTTTTCAGACTGAAACGATCATCCAAATGCTGATGGCTGCAAGTGAACAAATATCATCAGGCTTAGATTCACATGATCAGAGTCGCATGCGTTTACATAACGCACACACTTTGGTACGGGTTTTGTGCCACAAGAAAGATAGAGAAGCCTCCAAATTCTTGAAAGGGCAATATCAATTCCCCATGTCATCAGAGTACGAAGACACTCCATCAACGGATCAAACTTCAGGATCACCTTTCAGATCCGATCTTACAAAGCGAAGCACATCGTTTCGTTGGAATACAAACAGCCCACCTAGTTTGAAGTCGTTTAAGAAGAAACTTCAAGAAGCAACATCCGAAATCAGGAACGTAGCGTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1146

Amino Acids

129.85

Weight (kDa)

5.84

Isoelectric Point (pI)

42.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 689 - 1087 4.8e-104 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1629
AccB7I CCANNNNNTGG 1 cut(s) 2293
AccI GTMKAC 1 cut(s) 2156
AccII CGCG 3 cut(s) 116, 808, 2124
AclWI GGATC 8 cut(s) 290, 319, 1986, 2226, 2736, 3300, 3312, 3313
AcoI YGGCCR 1 cut(s) 2821
AcsI RAATTY 4 cut(s) 59, 391, 2990, 3230
AcuI CTGAAG 3 cut(s) 231, 1959, 3285
AfaI GTAC 7 cut(s) 227, 342, 1776, 2444, 2759, 3192, 3272
AfiI CCNNNNNNNGG 4 cut(s) 270, 1128, 2293, 3420
AflIII ACRYGT 1 cut(s) 343
AhdI GACNNNNNGTC 1 cut(s) 1024
AhlI ACTAGT 1 cut(s) 3028
AjnI CCWGG 2 cut(s) 1093, 2292
Alw21I GWGCWC 5 cut(s) 9, 466, 988, 2637, 2782
Alw26I GTCTC 5 cut(s) 83, 693, 1032, 1112, 2375
Alw44I GTGCAC 1 cut(s) 462
AlwI GGATC 8 cut(s) 290, 319, 1986, 2226, 2736, 3300, 3312, 3313
AlwNI CAGNNNCTG 3 cut(s) 1967, 2478, 3064
AoxI GGCC 5 cut(s) 1204, 1984, 2821, 2924, 3013
ApaLI GTGCAC 1 cut(s) 462
ApoI RAATTY 4 cut(s) 59, 391, 2990, 3230
ArsI GACNNNNNNTTYG 6 cut(s) 632, 664, 671, 703, 869, 901
Asp700I GAANNNNTTC 3 cut(s) 930, 1811, 3015
AspLEI GCGC 3 cut(s) 161, 2037, 2126
AspS9I GGNCC 5 cut(s) 354, 1257, 1306, 1695, 2924
AsuC2I CCSGG 2 cut(s) 97, 1829
AsuII TTCGAA 1 cut(s) 638
AvaII GGWCC 4 cut(s) 354, 1257, 1306, 1695
BaeGI GKGCMC 4 cut(s) 466, 814, 1101, 2557
BaeI ACNNNNGTAYC 2 cut(s) 1090, 1123
BalI TGGCCA 1 cut(s) 2823
BanII GRGCYC 1 cut(s) 2637
BauI CACGAG 1 cut(s) 2931
BbsI GAAGAC 7 cut(s) 1480, 1533, 1813, 1906, 2275, 2850, 3282
Bbv12I GWGCWC 5 cut(s) 9, 466, 988, 2637, 2782
BbvCI CCTCAGC 1 cut(s) 1044
BceAI ACGGC 3 cut(s) 21, 76, 728
BcgI CGANNNNNNTGC 2 cut(s) 14, 48
BciT130I CCWGG 2 cut(s) 1095, 2294
BclI TGATCA 1 cut(s) 3151
BcnI CCSGG 2 cut(s) 97, 1829
BcoDI GTCTC 5 cut(s) 83, 693, 1032, 1112, 2375
BcuI ACTAGT 1 cut(s) 3028
BfaI CTAG 7 cut(s) 287, 771, 1440, 2327, 2528, 3029, 3372
BfmI CTRYAG 2 cut(s) 23, 2670
BfoI RGCGCY 1 cut(s) 162
BfuAI ACCTGC 1 cut(s) 1629
BlpI GCTNAGC 2 cut(s) 2091, 3054
BmcAI AGTACT 2 cut(s) 227, 1776
Bme1390I CCNGG 4 cut(s) 97, 1095, 1829, 2294
Bme18I GGWCC 4 cut(s) 354, 1257, 1306, 1695
BmeRI GACNNNNNGTC 1 cut(s) 1024
BmgT120I GGNCC 5 cut(s) 354, 1257, 1306, 1695, 2924
BmiI GGNNCC 2 cut(s) 1307, 2148
BmrFI CCNGG 4 cut(s) 97, 1095, 1829, 2294
BpiI GAAGAC 7 cut(s) 1480, 1533, 1813, 1906, 2275, 2850, 3282
Bpu10I CCTNAGC 1 cut(s) 1044
Bpu1102I GCTNAGC 2 cut(s) 2091, 3054
Bpu14I TTCGAA 1 cut(s) 638
BpuEI CTTGAG 2 cut(s) 2156, 2435
BpuMI CCSGG 2 cut(s) 97, 1829
Bsa29I ATCGAT 2 cut(s) 141, 819
BsaI GGTCTC 2 cut(s) 83, 1112
BsaJI CCNNGG 6 cut(s) 320, 579, 1094, 1767, 2292, 2818
BsaWI WCCGGW 1 cut(s) 351
BsaXI ACNNNNNCTCC 2 cut(s) 2138, 2168
Bsc4I CCNNNNNNNGG 4 cut(s) 270, 1128, 2293, 3420
Bse1I ACTGG 4 cut(s) 1527, 2122, 2393, 2895
Bse3DI GCAATG 1 cut(s) 1456
BseBI CCWGG 2 cut(s) 1095, 2294
BseCI ATCGAT 2 cut(s) 141, 819
BseDI CCNNGG 6 cut(s) 320, 579, 1094, 1767, 2292, 2818
BseLI CCNNNNNNNGG 4 cut(s) 270, 1128, 2293, 3420
BseMI GCAATG 1 cut(s) 1456
BseMII CTCAG 8 cut(s) 1035, 1794, 1804, 2006, 2105, 2174, 2746, 3045
BseNI ACTGG 4 cut(s) 1527, 2122, 2393, 2895
BseRI GAGGAG 3 cut(s) 309, 2153, 2349
BseSI GKGCMC 4 cut(s) 466, 814, 1101, 2557
BsgI GTGCAG 1 cut(s) 704
Bsh1236I CGCG 3 cut(s) 116, 808, 2124
BshFI GGCC 5 cut(s) 1206, 1986, 2823, 2926, 3015
BshVI ATCGAT 2 cut(s) 141, 819
BsiHKAI GWGCWC 5 cut(s) 9, 466, 988, 2637, 2782
BsiSI CCGG 3 cut(s) 96, 352, 1829
BslFI GGGAC 3 cut(s) 1031, 2600, 2678
BslI CCNNNNNNNGG 4 cut(s) 270, 1128, 2293, 3420
BsmAI GTCTC 5 cut(s) 83, 693, 1032, 1112, 2375
BsmBI CGTCTC 1 cut(s) 2375
BsmFI GGGAC 3 cut(s) 1031, 2600, 2678
BsmI GAATGC 1 cut(s) 2741
BsnI GGCC 5 cut(s) 1206, 1986, 2823, 2926, 3015
Bso31I GGTCTC 2 cut(s) 83, 1112
Bsp119I TTCGAA 1 cut(s) 638
Bsp1286I GDGCHC 8 cut(s) 9, 466, 814, 988, 1101, 2557, 2637, 2782
Bsp1407I TGTACA 1 cut(s) 2442
Bsp1720I GCTNAGC 2 cut(s) 2091, 3054
BspANI GGCC 5 cut(s) 1206, 1986, 2823, 2926, 3015
BspCNI CTCAG 8 cut(s) 1036, 1795, 1803, 2005, 2104, 2173, 2745, 3046
BspDI ATCGAT 2 cut(s) 141, 819
BspFNI CGCG 3 cut(s) 116, 808, 2124
BspLI GGNNCC 2 cut(s) 1307, 2148
BspMAI CTGCAG 2 cut(s) 27, 2674
BspMI ACCTGC 1 cut(s) 1629
BspPI GGATC 8 cut(s) 290, 319, 1986, 2226, 2736, 3300, 3312, 3313
BspT104I TTCGAA 1 cut(s) 638
BspTNI GGTCTC 2 cut(s) 83, 1112
BsrDI GCAATG 1 cut(s) 1456
BsrGI TGTACA 1 cut(s) 2442
BsrI ACTGG 4 cut(s) 1527, 2122, 2393, 2895
BssECI CCNNGG 6 cut(s) 320, 579, 1094, 1767, 2292, 2818
BssSI CACGAG 1 cut(s) 2931
BssT1I CCWWGG 3 cut(s) 579, 1767, 2818
Bst2BI CACGAG 1 cut(s) 2931
Bst2UI CCWGG 2 cut(s) 1095, 2294
Bst4CI ACNGT 4 cut(s) 501, 1320, 1363, 2762
Bst6I CTCTTC 5 cut(s) 477, 653, 1095, 2202, 2856
BstAPI GCANNNNNTGC 1 cut(s) 2678
BstAUI TGTACA 1 cut(s) 2442
BstBI TTCGAA 1 cut(s) 638
BstC8I GCNNGC 8 cut(s) 50, 810, 1208, 1337, 1430, 1719, 2265, 3164
BstFNI CGCG 3 cut(s) 116, 808, 2124
BstH2I RGCGCY 1 cut(s) 162
BstHHI GCGC 3 cut(s) 161, 2037, 2126
BstMAI GTCTC 5 cut(s) 83, 693, 1032, 1112, 2375
BstMWI GCNNNNNNNGC 7 cut(s) 122, 365, 581, 1455, 2323, 2678, 3050
BstNI CCWGG 2 cut(s) 1095, 2294
BstNSI RCATGY 4 cut(s) 347, 479, 2741, 3166
BstSCI CCNGG 4 cut(s) 95, 1093, 1827, 2292
BstSFI CTRYAG 2 cut(s) 23, 2670
BstSLI GKGCMC 4 cut(s) 466, 814, 1101, 2557
BstUI CGCG 3 cut(s) 116, 808, 2124
BstV2I GAAGAC 7 cut(s) 1480, 1533, 1813, 1906, 2275, 2850, 3282
BstX2I RGATCY 2 cut(s) 2728, 3317
BstXI CCANNNNNNTGG 1 cut(s) 2831
BstYI RGATCY 2 cut(s) 2728, 3317
Bsu15I ATCGAT 2 cut(s) 141, 819
BsuRI GGCC 5 cut(s) 1206, 1986, 2823, 2926, 3015
BsuTUI ATCGAT 2 cut(s) 141, 819
BtgZI GCGATG 2 cut(s) 770, 1629
BtsI GCAGTG 4 cut(s) 902, 1451, 1662, 2667
BtsIMutI CAGTG 7 cut(s) 902, 1368, 1451, 1662, 2667, 2888, 2957
BveI ACCTGC 1 cut(s) 1629
Cac8I GCNNGC 8 cut(s) 50, 810, 1208, 1337, 1430, 1719, 2265, 3164
CaiI CAGNNNCTG 3 cut(s) 1967, 2478, 3064
CfoI GCGC 3 cut(s) 161, 2037, 2126
Cfr13I GGNCC 5 cut(s) 354, 1257, 1306, 1695, 2924
ClaI ATCGAT 2 cut(s) 141, 819
CpoI CGGWCCG 1 cut(s) 354
CseI GACGC 5 cut(s) 105, 169, 783, 1490, 2130
Csp6I GTAC 7 cut(s) 226, 341, 1775, 2443, 2758, 3191, 3271
CspCI CAANNNNNGTGG 4 cut(s) 172, 207, 3357, 3392
CspI CGGWCCG 1 cut(s) 354
CviQI GTAC 7 cut(s) 226, 341, 1775, 2443, 2758, 3191, 3271
DraI TTTAAA 2 cut(s) 1245, 2499
DriI GACNNNNNGTC 1 cut(s) 1024
EaeI YGGCCR 1 cut(s) 2821
Eam1104I CTCTTC 5 cut(s) 477, 653, 1095, 2202, 2856
Eam1105I GACNNNNNGTC 1 cut(s) 1024
EarI CTCTTC 5 cut(s) 477, 653, 1095, 2202, 2856
EciI GGCGGA 2 cut(s) 97, 109
Ecl136II GAGCTC 1 cut(s) 2635
Eco130I CCWWGG 3 cut(s) 579, 1767, 2818
Eco147I AGGCCT 1 cut(s) 3015
Eco24I GRGCYC 1 cut(s) 2637
Eco31I GGTCTC 2 cut(s) 83, 1112
Eco32I GATATC 2 cut(s) 32, 1800
Eco47I GGWCC 4 cut(s) 354, 1257, 1306, 1695
Eco53kI GAGCTC 1 cut(s) 2635
Eco57I CTGAAG 3 cut(s) 231, 1959, 3285
EcoICRI GAGCTC 1 cut(s) 2635
EcoO109I RGGNCCY 2 cut(s) 1306, 2924
EcoRI GAATTC 2 cut(s) 59, 391
EcoRII CCWGG 2 cut(s) 1093, 2292
EcoRV GATATC 2 cut(s) 32, 1800
EcoT14I CCWWGG 3 cut(s) 579, 1767, 2818
EcoT22I ATGCAT 2 cut(s) 370, 2743
EcoT38I GRGCYC 1 cut(s) 2637
ErhI CCWWGG 3 cut(s) 579, 1767, 2818
Esp3I CGTCTC 1 cut(s) 2375
FaqI GGGAC 3 cut(s) 1031, 2600, 2678
FauI CCCGC 4 cut(s) 121, 540, 801, 1710
FbaI TGATCA 1 cut(s) 3151
FblI GTMKAC 1 cut(s) 2156
FriOI GRGCYC 1 cut(s) 2637
FspBI CTAG 7 cut(s) 287, 771, 1440, 2327, 2528, 3029, 3372
GlaI GCGC 3 cut(s) 160, 2036, 2125
HaeII RGCGCY 1 cut(s) 162
HaeIII GGCC 5 cut(s) 1206, 1986, 2823, 2926, 3015
HapII CCGG 3 cut(s) 96, 352, 1829
HgaI GACGC 5 cut(s) 105, 169, 783, 1490, 2130
HhaI GCGC 3 cut(s) 161, 2037, 2126
Hin6I GCGC 3 cut(s) 159, 2035, 2124
HinP1I GCGC 3 cut(s) 159, 2035, 2124
HincII GTYRAC 3 cut(s) 1480, 2157, 2644
HindII GTYRAC 3 cut(s) 1480, 2157, 2644
HpaII CCGG 3 cut(s) 96, 352, 1829
Hpy99I CGWCG 4 cut(s) 48, 76, 2324, 2389
HpyAV CCTTC 7 cut(s) 660, 1196, 2768, 2888, 2937, 3005, 3026
HpyCH4III ACNGT 4 cut(s) 501, 1320, 1363, 2762
HpyCH4IV ACGT 3 cut(s) 1731, 2101, 3426
HpyF10VI GCNNNNNNNGC 7 cut(s) 122, 365, 581, 1455, 2323, 2678, 3050
HpySE526I ACGT 3 cut(s) 1731, 2101, 3426
HspAI GCGC 3 cut(s) 159, 2035, 2124
Ksp22I TGATCA 1 cut(s) 3151
LmnI GCTCC 5 cut(s) 4, 2015, 2146, 2362, 3034
MaeI CTAG 7 cut(s) 287, 771, 1440, 2327, 2528, 3029, 3372
MaeII ACGT 3 cut(s) 1731, 2101, 3426
MaeIII GTNAC 4 cut(s) 648, 1727, 2372, 2696
MflI RGATCY 2 cut(s) 2728, 3317
MhlI GDGCHC 8 cut(s) 9, 466, 814, 988, 1101, 2557, 2637, 2782
MlsI TGGCCA 1 cut(s) 2823
MluNI TGGCCA 1 cut(s) 2823
MlyI GAGTC 7 cut(s) 98, 560, 2152, 2362, 2469, 2840, 3166
MmeI TCCRAC 2 cut(s) 1339, 3332
Mox20I TGGCCA 1 cut(s) 2823
Mph1103I ATGCAT 2 cut(s) 370, 2743
MroXI GAANNNNTTC 3 cut(s) 930, 1811, 3015
MscI TGGCCA 1 cut(s) 2823
MseI TTAA 7 cut(s) 489, 861, 1244, 1947, 2235, 2498, 3387
MslI CAYNNNNRTG 4 cut(s) 731, 2808, 2829, 3101
Msp20I TGGCCA 1 cut(s) 2823
MspA1I CMGCKG 2 cut(s) 388, 1964
MspI CCGG 3 cut(s) 96, 352, 1829
MspR9I CCNGG 4 cut(s) 97, 1095, 1829, 2294
Mva1269I GAATGC 1 cut(s) 2741
MvaI CCWGG 2 cut(s) 1095, 2294
MvnI CGCG 3 cut(s) 116, 808, 2124
MwoI GCNNNNNNNGC 7 cut(s) 122, 365, 581, 1455, 2323, 2678, 3050
NciI CCSGG 2 cut(s) 97, 1829
NlaIV GGNNCC 2 cut(s) 1307, 2148
NmeAIII GCCGAG 1 cut(s) 301
NmuCI GTSAC 2 cut(s) 648, 2696
NsiI ATGCAT 2 cut(s) 370, 2743
NspI RCATGY 4 cut(s) 347, 479, 2741, 3166
NspV TTCGAA 1 cut(s) 638
PaeI GCATGC 1 cut(s) 3166
PceI AGGCCT 1 cut(s) 3015
PciI ACATGT 1 cut(s) 343
PcsI WCGNNNNNNNCGW 1 cut(s) 40
PctI GAATGC 1 cut(s) 2741
PdmI GAANNNNTTC 3 cut(s) 930, 1811, 3015
PflFI GACNNNGTC 3 cut(s) 179, 1255, 1484
PflMI CCANNNNNTGG 1 cut(s) 2293
PleI GAGTC 7 cut(s) 98, 559, 2152, 2362, 2469, 2840, 3165
PpsI GAGTC 7 cut(s) 98, 559, 2152, 2362, 2469, 2840, 3165
PpuMI RGGWCCY 1 cut(s) 1306
PscI ACATGT 1 cut(s) 343
Psp124BI GAGCTC 1 cut(s) 2637
Psp5II RGGWCCY 1 cut(s) 1306
Psp6I CCWGG 2 cut(s) 1093, 2292
PspGI CCWGG 2 cut(s) 1093, 2292
PspN4I GGNNCC 2 cut(s) 1307, 2148
PspPI GGNCC 5 cut(s) 354, 1257, 1306, 1695, 2924
PspPPI RGGWCCY 1 cut(s) 1306
PstI CTGCAG 2 cut(s) 27, 2674
PstNI CAGNNNCTG 3 cut(s) 1967, 2478, 3064
PsuI RGATCY 2 cut(s) 2728, 3317
PsyI GACNNNGTC 3 cut(s) 179, 1255, 1484
PvuII CAGCTG 2 cut(s) 388, 1964
RsaI GTAC 7 cut(s) 227, 342, 1776, 2444, 2759, 3192, 3272
RsaNI GTAC 7 cut(s) 226, 341, 1775, 2443, 2758, 3191, 3271
RseI CAYNNNNRTG 4 cut(s) 731, 2808, 2829, 3101
Rsr2I CGGWCCG 1 cut(s) 354
RsrII CGGWCCG 1 cut(s) 354
SacI GAGCTC 1 cut(s) 2637
SalI GTCGAC 1 cut(s) 2155
SaqAI TTAA 7 cut(s) 489, 861, 1244, 1947, 2235, 2498, 3387
Sau96I GGNCC 5 cut(s) 354, 1257, 1306, 1695, 2924
ScaI AGTACT 2 cut(s) 227, 1776
SchI GAGTC 7 cut(s) 98, 560, 2152, 2362, 2469, 2840, 3166
ScrFI CCNGG 4 cut(s) 97, 1095, 1829, 2294
SduI GDGCHC 8 cut(s) 9, 466, 814, 988, 1101, 2557, 2637, 2782
SfcI CTRYAG 2 cut(s) 23, 2670
SfuI TTCGAA 1 cut(s) 638
SinI GGWCC 4 cut(s) 354, 1257, 1306, 1695
SmiMI CAYNNNNRTG 4 cut(s) 731, 2808, 2829, 3101
SmlI CTYRAG 2 cut(s) 2135, 2414
SmoI CTYRAG 2 cut(s) 2135, 2414
SpeI ACTAGT 1 cut(s) 3028
SphI GCATGC 1 cut(s) 3166
SseBI AGGCCT 1 cut(s) 3015
SspI AATATT 4 cut(s) 567, 1153, 1648, 1674
SspMI CTAG 7 cut(s) 287, 771, 1440, 2327, 2528, 3029, 3372
SstI GAGCTC 1 cut(s) 2637
StuI AGGCCT 1 cut(s) 3015
StyD4I CCNGG 4 cut(s) 95, 1093, 1827, 2292
StyI CCWWGG 3 cut(s) 579, 1767, 2818
TaaI ACNGT 4 cut(s) 501, 1320, 1363, 2762
TaiI ACGT 3 cut(s) 1734, 2104, 3429
TatI WGTACW 4 cut(s) 225, 1774, 2442, 2757
TauI GCSGC 1 cut(s) 125
Tru1I TTAA 7 cut(s) 489, 861, 1244, 1947, 2235, 2498, 3387
Tru9I TTAA 7 cut(s) 489, 861, 1244, 1947, 2235, 2498, 3387
TscAI CASTG 7 cut(s) 902, 1368, 1451, 1669, 2674, 2895, 2964
TseFI GTSAC 2 cut(s) 648, 2696
Tsp45I GTSAC 2 cut(s) 648, 2696
TspGWI ACGGA 2 cut(s) 719, 3305
TspRI CASTG 7 cut(s) 902, 1368, 1451, 1669, 2674, 2895, 2964
Tth111I GACNNNGTC 3 cut(s) 179, 1255, 1484
Van91I CCANNNNNTGG 1 cut(s) 2293
VneI GTGCAC 1 cut(s) 462
VpaK11BI GGWCC 4 cut(s) 354, 1257, 1306, 1695
XapI RAATTY 4 cut(s) 59, 391, 2990, 3230
XceI RCATGY 4 cut(s) 347, 479, 2741, 3166
XcmI CCANNNNNNNNNTGG 1 cut(s) 2045
XmiI GTMKAC 1 cut(s) 2156
XmnI GAANNNNTTC 3 cut(s) 930, 1811, 3015
XspI CTAG 7 cut(s) 287, 771, 1440, 2327, 2528, 3029, 3372
ZrmI AGTACT 2 cut(s) 227, 1776
Zsp2I ATGCAT 2 cut(s) 370, 2743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.