Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0012968

Physical Location & Seq

Genomic Coordinates Forward (+)

15881063 .. 15887151

Gene Structure 6089 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGACTGTGGCGAGCTCAGTGGTCCACGAAGTGTTGGGCCGGCGGGCCGAGGACGTCGACGAGCCCATAATCGAGTACATCGTCAACGTCCTCGCCGACGAGGACTTCGATTTCGGCGAAGACGGTGAAGGCGCCTTCGAAGCTCTCGGCGAGCTCCTTGTCGGCGCCGGCTGCGTTAGCGACTTCGCTGAGTGTCGCTCGGTTTGTAGTACAATAACAGAGAAGTTCGGGAAACATGGGTTGGTTAAAGCAAAACCGACTGTGCGGAGCCTATCAGCACCTGTAAGAATGGATGATGGGATGAATGAGAAGGTAGCTCCAAAGAAGAAGGTTGAGTTGATTGATGGCCCTGTGTTAACTGAACGTGACCGAGCTAAGATAGAAAGGAAAAAGAGGAAGGATGATCGCCAAAGAGAGCAACAATATCAAATACATTTAGCAGAAATGGAAGCAGTCAGGGCTGGAATGCCTGTTGTAAGTGTAAATCATGAAAGTGCTGGTGGCCCAAATGTCAGGGATATCCGTCTGGAAAACTTCAATGTTTCTGTGGGTGGCCGTGATCTTATTGTGGATGGTTCAGTAACACTTTCTTATGGAAGGCATTATGGCCTTGTGGGAAGAAATGGTACGGGGAAAACAACTTTTCTTAGGCACTTGGCTATGCATGCCATTGATGGCATTCCTAGGAACTTCCAAATATTGCATGTGGAGCAAGAAGTGGTGGGTGATGATACAACAGCCTTGCAGTGTGTTCTTAACACTGATGTCGAAAGAACTAAGCTTATGGAAGAAGAAGCTAGTCTTCTTGCTCAACAGAGGGCACTGGAATTTGAGGACTCAACAGAAAAGGGCAACGGGGAAGTTGAGAAAGATGCCATTGGGCGGAGACTTCAGGAGATATACAAAAGGCTTGAGTTCATTGATGCTGATTCAGCAGAGTCACGGGCAGCTTCCATTCTTGCGGGTCTTAGTTTCTCTCCAGAGATGCAGCGAAAACCAACTAAAGCATTTTCAGGAGGATGGCGAATGCGAATAGCTCTTGCTCGTGCCCTGTTTATAGAGCCTGATTTGTTACTGCTTGATGAACCCACGTTTGTAACCATCTTGATCGTTCATGCTGTCCTCTGGCTGGAGGCTTACCTGGTGAAGTGGCCAAAAACATGCATAGTTGTTTCTCATGCTAGAGAATTCTTGAACACGGTAGTCACTGATATCCTACATCTTCATGGGCAAAAGTTGACTGCTTACAAAGGGGACTATGATACATATGAGAGGACACGAATAGAACTAGTGAAGAACCAACAGAAAGCTTTTGAGGCCAATGAGCGTTCAAGAGCACATATGCAGACTTTTATTGATAAGTTCCGCTACAATGCCAAGAGGGCCGCACTTGTTCAGTCAAGAATTAAGGCTTTGGACCGGTTGGGACATGTGGATGAGATTGTAAATGACCCTGACTATAAGTTTGAGTTCCCAACTCCAGACGACAGACCTGGTCCTCCTATAATAAGTTTCAGTGATGCATCATTTGGTTATCCTGGCGGACCCGTTTTGTTTAGGAATTTAAATTTTGGAATTGACCTTGACAGCCGCATTGCAATGGTTGGGCCAAATGGTATTGGTAAATCAACAATACTCAAACTAATTGCAGGGGAGCTACAACCAATCTCTGGGACAGTTTTCCGTTCGGCTAAGGTACGGATTGCTGTGTTCAGTCAGCACCACGTTGATGGGCTAGATTTATCTTCTAATCCCTTATTGTATATGATGCGCTGCTTCCCAGGAGTACCTGAACAAAAGCTCCGATCTCACTTGGGTTCTTTAGGTGTCTCTGGAAATCTTGCACTTCAGCCTATGTACACGTTGTCTGGTGGTCAGAAGAGCAGAGTTGCGTTTGCCAAGATAACTTTCAAGAAACCGCACATAATATTGCTTGATGAGCCCTCCAATCATCTGGACTTGGATGCTGTGGAGGCACTAATACAAGGTCTTGTGCTCTTCCAAGGAGGCATTCTCATGGTTAGTCACGACGAGCATCTGATCGATCTGGAAGTGTGGACGAGCTATGGGTGGTATCAGAAGGTAGGATACAACCATTCGATGGCAGTTTTGAGGACTACAAGAAGATACTGCAGTCGTCGTAGAGAAAAGTTATCAGCATTTCATCCATCTCATGGCCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0010035 GO:0010038 GO:0042221 GO:0042742 GO:0043207 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0051704 GO:0051707 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran ABC_tran_Xtn

Protein Analysis

728

Amino Acids

81.28

Weight (kDa)

6.49

Isoelectric Point (pI)

36.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PWI_ABCF3	PF26051	6 - 78	1.6e-15	ABCF3, PWI-like helical bundle domain
ABC_tran	PF00005	193 - 364	3.8e-18	ABC transporter
ABC_tran_Xtn	PF12848	406 - 486	2.1e-23	ABC transporter
ABC_tran	PF00005	520 - 650	4.6e-22	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64550
fragaria_vesca	FvH4_5g11480 FvH4_5g11480
malus_domestica	MD06G1113200.v1.1 MD14G1134300.v1.1
prunus_persica	Prupe.5G126100_v2.0.a1 Prupe.5G126100_v2.0.a1
pyrus_communis	pycom06g10590
rosa_chinensis	RchiOBHm_Chr7g0186321
rosa_laevigata	RLG00000004849 RLG00000034878
rosa_multiflora	Rmu_sc0000645.1_g000050
rosa_roxburghii	Rroxscaffold_3G00268220
rosa_rugosa	Rorug06G0473500
rosa_samantha	Rh7AG067700 Rh7BG083500 Rh7CG080300
rosa_wichuraiana	Rw7G006730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	57
AccB1I	GGYRCC	2 cut(s)	131, 164
AccB7I	CCANNNNNTGG	3 cut(s)	1670, 2101, 2174
AccI	GTMKAC	1 cut(s)	57
AciI	CCGC	9 cut(s)	43, 265, 883, 962, 1366, 1386, 1542, 1591, 1919
AcoI	YGGCCR	3 cut(s)	553, 1151, 2176
AcsI	RAATTY	4 cut(s)	827, 1187, 1561, 1567
AcuI	CTGAAG	2 cut(s)	875, 1832
AcyI	GRCGYC	3 cut(s)	54, 132, 165
AdeI	CACNNNGTG	1 cut(s)	31
AfaI	GTAC	6 cut(s)	77, 211, 628, 1698, 1788, 1859
AfiI	CCNNNNNNNGG	5 cut(s)	882, 1129, 1670, 2101, 2174
AflIII	ACRYGT	2 cut(s)	1429, 1860
AgeI	ACCGGT	1 cut(s)	1419
AgsI	TTSAA	4 cut(s)	538, 1195, 1332, 1912
AhlI	ACTAGT	1 cut(s)	1288
AjnI	CCWGG	4 cut(s)	1140, 1492, 1537, 1780
AjuI	GAANNNNNNNTTGG	6 cut(s)	224, 256, 1892, 1924, 1995, 2027
AloI	GAACNNNNNNTCC	2 cut(s)	1785, 1817
Alw21I	GWGCWC	4 cut(s)	17, 156, 1339, 1998
Alw26I	GTCTC	2 cut(s)	880, 1834
AlwNI	CAGNNNCTG	1 cut(s)	281
ApeKI	GCWGC	4 cut(s)	171, 947, 988, 1773
ApoI	RAATTY	4 cut(s)	827, 1187, 1561, 1567
ArsI	GACNNNNNNTTYG	6 cut(s)	89, 95, 121, 127, 1448, 1480
AsiGI	ACCGGT	1 cut(s)	1419
AspA2I	CCTAGG	1 cut(s)	683
AspLEI	GCGC	3 cut(s)	134, 167, 1773
AsuHPI	GGTGA	3 cut(s)	137, 737, 1156
AsuII	TTCGAA	1 cut(s)	138
AvaII	GGWCC	4 cut(s)	22, 1417, 1496, 1544
AvrII	CCTAGG	1 cut(s)	683
BaeGI	GKGCMC	2 cut(s)	823, 1051
BaeI	ACNNNNGTAYC	2 cut(s)	2119, 2152
BalI	TGGCCA	1 cut(s)	1153
BanI	GGYRCC	2 cut(s)	131, 164
BanII	GRGCYC	4 cut(s)	17, 66, 156, 1944
BarI	GAAGNNNNNNTAC	4 cut(s)	610, 642, 2072, 2104
BauI	CACGAG	1 cut(s)	1044
BbsI	GAAGAC	2 cut(s)	126, 794
Bbv12I	GWGCWC	4 cut(s)	17, 156, 1339, 1998
BbvI	GCAGC	4 cut(s)	158, 959, 1000, 1760
BccI	CCATC	9 cut(s)	290, 338, 566, 668, 1014, 1109, 1724, 2095, 2176
BceAI	ACGGC	1 cut(s)	540
BciT130I	CCWGG	4 cut(s)	1142, 1494, 1539, 1782
BciVI	GTATCC	1 cut(s)	2081
BcoDI	GTCTC	2 cut(s)	880, 1834
BcuI	ACTAGT	1 cut(s)	1288
BfaI	CTAG	5 cut(s)	684, 798, 1182, 1289, 1736
BfmI	CTRYAG	1 cut(s)	2131
BfoI	RGCGCY	2 cut(s)	135, 168
BfuI	GTATCC	1 cut(s)	2081
BglI	GCCNNNNNGGC	1 cut(s)	1382
BisI	GCNGC	6 cut(s)	172, 948, 989, 1386, 1591, 1774
BlnI	CCTAGG	1 cut(s)	683
BlsI	GCNGC	6 cut(s)	173, 949, 990, 1387, 1592, 1775
Bme1390I	CCNGG	4 cut(s)	1142, 1494, 1539, 1782
Bme18I	GGWCC	4 cut(s)	22, 1417, 1496, 1544
BmiI	GGNNCC	4 cut(s)	133, 166, 269, 1546
BmrFI	CCNGG	4 cut(s)	1142, 1494, 1539, 1782
BmsI	GCATC	8 cut(s)	862, 913, 975, 1510, 1532, 1758, 1954, 2044
BpiI	GAAGAC	2 cut(s)	126, 794
BplI	GAGNNNNNCTC	4 cut(s)	182, 214, 1998, 2030
BpmI	CTGGAG	3 cut(s)	963, 1151, 1464
Bpu10I	CCTNAGC	1 cut(s)	1692
Bpu14I	TTCGAA	1 cut(s)	138
BpuEI	CTTGAG	1 cut(s)	932
Bsa29I	ATCGAT	1 cut(s)	2043
BsaHI	GRCGYC	3 cut(s)	54, 132, 165
BsaJI	CCNNGG	4 cut(s)	48, 683, 1780, 2002
BsaWI	WCCGGW	1 cut(s)	1419
BsaXI	ACNNNNNCTCC	2 cut(s)	1785, 1815
Bsc4I	CCNNNNNNNGG	5 cut(s)	882, 1129, 1670, 2101, 2174
Bse118I	RCCGGY	3 cut(s)	39, 167, 1419
Bse1I	ACTGG	1 cut(s)	828
Bse3DI	GCAATG	2 cut(s)	1593, 1605
BseBI	CCWGG	4 cut(s)	1142, 1494, 1539, 1782
BseCI	ATCGAT	1 cut(s)	2043
BseDI	CCNNGG	4 cut(s)	48, 683, 1780, 2002
BseGI	GGATG	8 cut(s)	298, 306, 406, 577, 1025, 1441, 1969, 2164
BseLI	CCNNNNNNNGG	5 cut(s)	882, 1129, 1670, 2101, 2174
BseMI	GCAATG	2 cut(s)	1593, 1605
BseMII	CTCAG	2 cut(s)	30, 180
BseNI	ACTGG	1 cut(s)	828
BseSI	GKGCMC	2 cut(s)	823, 1051
BseXI	GCAGC	4 cut(s)	158, 959, 1000, 1760
BshNI	GGYRCC	2 cut(s)	131, 164
BshTI	ACCGGT	1 cut(s)	1419
BshVI	ATCGAT	1 cut(s)	2043
BsiHKAI	GWGCWC	4 cut(s)	17, 156, 1339, 1998
BsiSI	CCGG	3 cut(s)	40, 168, 1420
BslFI	GGGAC	3 cut(s)	1268, 1440, 1687
BslI	CCNNNNNNNGG	5 cut(s)	882, 1129, 1670, 2101, 2174
BsmAI	GTCTC	2 cut(s)	880, 1834
BsmFI	GGGAC	3 cut(s)	1268, 1440, 1687
BsmI	GAATGC	4 cut(s)	471, 678, 1032, 2010
Bsp119I	TTCGAA	1 cut(s)	138
Bsp1286I	GDGCHC	8 cut(s)	17, 66, 156, 823, 1051, 1339, 1944, 1998
Bsp1407I	TGTACA	1 cut(s)	1857
Bsp143I	GATC	6 cut(s)	403, 559, 1107, 1805, 2040, 2044
BspACI	CCGC	9 cut(s)	43, 265, 883, 962, 1366, 1386, 1542, 1591, 1919
BspCNI	CTCAG	2 cut(s)	29, 181
BspDI	ATCGAT	1 cut(s)	2043
BspHI	TCATGA	1 cut(s)	487
BspLI	GGNNCC	4 cut(s)	133, 166, 269, 1546
BspMAI	CTGCAG	1 cut(s)	2135
BspQI	GCTCTTC	2 cut(s)	1874, 2003
BspT104I	TTCGAA	1 cut(s)	138
BspT107I	GGYRCC	2 cut(s)	131, 164
BsrDI	GCAATG	2 cut(s)	1593, 1605
BsrFI	RCCGGY	3 cut(s)	39, 167, 1419
BsrGI	TGTACA	1 cut(s)	1857
BsrI	ACTGG	1 cut(s)	828
BssAI	RCCGGY	3 cut(s)	39, 167, 1419
BssECI	CCNNGG	4 cut(s)	48, 683, 1780, 2002
BssMI	GATC	6 cut(s)	403, 559, 1107, 1805, 2040, 2044
BssNI	GRCGYC	3 cut(s)	54, 132, 165
BssSI	CACGAG	1 cut(s)	1044
BssT1I	CCWWGG	2 cut(s)	683, 2002
Bst2BI	CACGAG	1 cut(s)	1044
Bst2UI	CCWGG	4 cut(s)	1142, 1494, 1539, 1782
Bst4CI	ACNGT	5 cut(s)	7, 125, 262, 1201, 1678
Bst6I	CTCTTC	2 cut(s)	1874, 2003
BstACI	GRCGYC	3 cut(s)	54, 132, 165
BstAUI	TGTACA	1 cut(s)	1857
BstBI	TTCGAA	1 cut(s)	138
BstC8I	GCNNGC	6 cut(s)	13, 41, 45, 152, 169, 666
BstDEI	CTNAG	7 cut(s)	16, 189, 375, 647, 777, 968, 1692
BstF5I	GGATG	8 cut(s)	298, 306, 406, 577, 1025, 1441, 1969, 2164
BstH2I	RGCGCY	2 cut(s)	135, 168
BstHHI	GCGC	3 cut(s)	134, 167, 1773
BstKTI	GATC	6 cut(s)	406, 562, 1110, 1808, 2043, 2047
BstMAI	GTCTC	2 cut(s)	880, 1834
BstMBI	GATC	6 cut(s)	403, 559, 1107, 1805, 2040, 2044
BstNI	CCWGG	4 cut(s)	1142, 1494, 1539, 1782
BstNSI	RCATGY	4 cut(s)	668, 707, 1164, 1433
BstSCI	CCNGG	4 cut(s)	1140, 1492, 1537, 1780
BstSFI	CTRYAG	1 cut(s)	2131
BstSLI	GKGCMC	2 cut(s)	823, 1051
BstV1I	GCAGC	4 cut(s)	158, 959, 1000, 1760
BstV2I	GAAGAC	2 cut(s)	126, 794
BstXI	CCANNNNNNTGG	2 cut(s)	1730, 1954
Bsu15I	ATCGAT	1 cut(s)	2043
BsuI	GTATCC	1 cut(s)	2081
BsuTUI	ATCGAT	1 cut(s)	2043
BtsCI	GGATG	8 cut(s)	298, 306, 406, 577, 1025, 1441, 1969, 2164
BtsI	GCAGTG	1 cut(s)	752
BtsIMutI	CAGTG	6 cut(s)	24, 752, 759, 821, 1206, 1522
Cac8I	GCNNGC	6 cut(s)	13, 41, 45, 152, 169, 666
CaiI	CAGNNNCTG	1 cut(s)	281
CciI	TCATGA	1 cut(s)	487
CfoI	GCGC	3 cut(s)	134, 167, 1773
Cfr10I	RCCGGY	3 cut(s)	39, 167, 1419
ClaI	ATCGAT	1 cut(s)	2043
CsiI	ACCWGGT	2 cut(s)	1140, 1492
Csp6I	GTAC	6 cut(s)	76, 210, 627, 1697, 1787, 1858
CspAI	ACCGGT	1 cut(s)	1419
CviQI	GTAC	6 cut(s)	76, 210, 627, 1697, 1787, 1858
DdeI	CTNAG	7 cut(s)	16, 189, 375, 647, 777, 968, 1692
DinI	GGCGCC	2 cut(s)	133, 166
DpnI	GATC	6 cut(s)	405, 561, 1109, 1807, 2042, 2046
DpnII	GATC	6 cut(s)	403, 559, 1107, 1805, 2040, 2044
DraI	TTTAAA	1 cut(s)	1566
DraIII	CACNNNGTG	1 cut(s)	31
EaeI	YGGCCR	3 cut(s)	553, 1151, 2176
Eam1104I	CTCTTC	2 cut(s)	1874, 2003
EarI	CTCTTC	2 cut(s)	1874, 2003
EciI	GGCGGA	2 cut(s)	898, 1557
Ecl136II	GAGCTC	2 cut(s)	15, 154
Eco130I	CCWWGG	2 cut(s)	683, 2002
Eco24I	GRGCYC	4 cut(s)	17, 66, 156, 1944
Eco32I	GATATC	2 cut(s)	520, 1213
Eco47I	GGWCC	4 cut(s)	22, 1417, 1496, 1544
Eco53kI	GAGCTC	2 cut(s)	15, 154
Eco57I	CTGAAG	2 cut(s)	875, 1832
EcoICRI	GAGCTC	2 cut(s)	15, 154
EcoRI	GAATTC	1 cut(s)	1187
EcoRII	CCWGG	4 cut(s)	1140, 1492, 1537, 1780
EcoRV	GATATC	2 cut(s)	520, 1213
EcoT14I	CCWWGG	2 cut(s)	683, 2002
EcoT22I	ATGCAT	3 cut(s)	666, 1166, 1525
EcoT38I	GRGCYC	4 cut(s)	17, 66, 156, 1944
EgeI	GGCGCC	2 cut(s)	133, 166
EheI	GGCGCC	2 cut(s)	133, 166
ErhI	CCWWGG	2 cut(s)	683, 2002
FalI	AAGNNNNNCTT	2 cut(s)	786, 818
FaqI	GGGAC	3 cut(s)	1268, 1440, 1687
FauI	CCCGC	2 cut(s)	36, 955
FauNDI	CATATG	2 cut(s)	1267, 1341
FblI	GTMKAC	1 cut(s)	57
Fnu4HI	GCNGC	6 cut(s)	172, 948, 989, 1386, 1591, 1774
FokI	GGATG	8 cut(s)	305, 313, 413, 584, 1032, 1448, 1976, 2151
FriOI	GRGCYC	4 cut(s)	17, 66, 156, 1944
Fsp4HI	GCNGC	6 cut(s)	172, 948, 989, 1386, 1591, 1774
FspBI	CTAG	5 cut(s)	684, 798, 1182, 1289, 1736
GlaI	GCGC	3 cut(s)	133, 166, 1772
GluI	GCNGC	6 cut(s)	172, 948, 989, 1386, 1591, 1774
GsuI	CTGGAG	3 cut(s)	963, 1151, 1464
HaeII	RGCGCY	2 cut(s)	135, 168
HapII	CCGG	3 cut(s)	40, 168, 1420
HhaI	GCGC	3 cut(s)	134, 167, 1773
Hin1I	GRCGYC	3 cut(s)	54, 132, 165
Hin6I	GCGC	3 cut(s)	132, 165, 1771
HinP1I	GCGC	3 cut(s)	132, 165, 1771
HincII	GTYRAC	4 cut(s)	58, 85, 357, 1239
HindII	GTYRAC	4 cut(s)	58, 85, 357, 1239
HindIII	AAGCTT	2 cut(s)	779, 1308
HinfI	GANTC	3 cut(s)	836, 929, 938
HpaI	GTTAAC	1 cut(s)	357
HpaII	CCGG	3 cut(s)	40, 168, 1420
HphI	GGTGA	3 cut(s)	137, 737, 1156
Hpy166II	GTNNAC	7 cut(s)	25, 58, 85, 357, 1239, 1860, 2058
Hpy188I	TCNGA	4 cut(s)	1805, 1878, 2040, 2079
Hpy8I	GTNNAC	7 cut(s)	25, 58, 85, 357, 1239, 1860, 2058
Hpy99I	CGWCG	5 cut(s)	59, 62, 101, 2033, 2142
HpyAV	CCTTC	7 cut(s)	122, 145, 304, 322, 391, 591, 2074
HpyCH4III	ACNGT	5 cut(s)	7, 125, 262, 1201, 1678
HpyCH4IV	ACGT	6 cut(s)	54, 87, 364, 1091, 1725, 1862
HpyF3I	CTNAG	7 cut(s)	16, 189, 375, 647, 777, 968, 1692
HpySE526I	ACGT	6 cut(s)	54, 87, 364, 1091, 1725, 1862
Hsp92I	GRCGYC	3 cut(s)	54, 132, 165
HspAI	GCGC	3 cut(s)	132, 165, 1771
KasI	GGCGCC	2 cut(s)	131, 164
KroI	GCCGGC	2 cut(s)	39, 167
KroNI	GCCGGC	2 cut(s)	41, 169
KspAI	GTTAAC	1 cut(s)	357
Kzo9I	GATC	6 cut(s)	403, 559, 1107, 1805, 2040, 2044
LguI	GCTCTTC	2 cut(s)	1874, 2003
LmnI	GCTCC	6 cut(s)	159, 267, 322, 709, 1654, 1806
Lsp1109I	GCAGC	4 cut(s)	158, 959, 1000, 1760
LweI	GCATC	8 cut(s)	862, 913, 975, 1510, 1532, 1758, 1954, 2044
MabI	ACCWGGT	2 cut(s)	1140, 1492
MaeI	CTAG	5 cut(s)	684, 798, 1182, 1289, 1736
MaeII	ACGT	6 cut(s)	54, 87, 364, 1091, 1725, 1862
MaeIII	GTNAC	7 cut(s)	365, 580, 939, 1071, 1096, 1204, 2024
MalI	GATC	6 cut(s)	405, 561, 1109, 1807, 2042, 2046
MboI	GATC	6 cut(s)	403, 559, 1107, 1805, 2040, 2044
MhlI	GDGCHC	8 cut(s)	17, 66, 156, 823, 1051, 1339, 1944, 1998
MlsI	TGGCCA	1 cut(s)	1153
MluCI	AATT	7 cut(s)	827, 1187, 1404, 1561, 1567, 1575, 1644
MluNI	TGGCCA	1 cut(s)	1153
Mly113I	GGCGCC	2 cut(s)	132, 165
MlyI	GAGTC	2 cut(s)	830, 947
Mox20I	TGGCCA	1 cut(s)	1153
Mph1103I	ATGCAT	3 cut(s)	666, 1166, 1525
MroNI	GCCGGC	2 cut(s)	39, 167
MscI	TGGCCA	1 cut(s)	1153
MseI	TTAA	5 cut(s)	246, 356, 756, 1407, 1565
MslI	CAYNNNNRTG	6 cut(s)	492, 1224, 1434, 1598, 1728, 2015
Msp20I	TGGCCA	1 cut(s)	1153
MspI	CCGG	3 cut(s)	40, 168, 1420
MspR9I	CCNGG	4 cut(s)	1142, 1494, 1539, 1782
Mva1269I	GAATGC	4 cut(s)	471, 678, 1032, 2010
MvaI	CCWGG	4 cut(s)	1142, 1494, 1539, 1782
NaeI	GCCGGC	2 cut(s)	41, 169
NarI	GGCGCC	2 cut(s)	132, 165
NdeI	CATATG	2 cut(s)	1267, 1341
NdeII	GATC	6 cut(s)	403, 559, 1107, 1805, 2040, 2044
NgoMIV	GCCGGC	2 cut(s)	39, 167
NlaIV	GGNNCC	4 cut(s)	133, 166, 269, 1546
NmeAIII	GCCGAG	2 cut(s)	73, 126
NmuCI	GTSAC	4 cut(s)	365, 939, 1204, 2024
NsiI	ATGCAT	3 cut(s)	666, 1166, 1525
NspI	RCATGY	4 cut(s)	668, 707, 1164, 1433
NspV	TTCGAA	1 cut(s)	138
PaeI	GCATGC	1 cut(s)	668
PagI	TCATGA	1 cut(s)	487
PciI	ACATGT	1 cut(s)	1429
PciSI	GCTCTTC	2 cut(s)	1874, 2003
PcsI	WCGNNNNNNNCGW	4 cut(s)	78, 93, 105, 114
PctI	GAATGC	4 cut(s)	471, 678, 1032, 2010
PdiI	GCCGGC	2 cut(s)	41, 169
PfeI	GAWTC	1 cut(s)	929
PflFI	GACNNNGTC	1 cut(s)	1494
PflMI	CCANNNNNTGG	3 cut(s)	1670, 2101, 2174
PinAI	ACCGGT	1 cut(s)	1419
PkrI	GCNGC	6 cut(s)	173, 949, 990, 1387, 1592, 1775
PleI	GAGTC	2 cut(s)	830, 946
PluTI	GGCGCC	2 cut(s)	135, 168
PpsI	GAGTC	2 cut(s)	830, 946
PscI	ACATGT	1 cut(s)	1429
Psp124BI	GAGCTC	2 cut(s)	17, 156
Psp6I	CCWGG	4 cut(s)	1140, 1492, 1537, 1780
PspGI	CCWGG	4 cut(s)	1140, 1492, 1537, 1780
PspN4I	GGNNCC	4 cut(s)	133, 166, 269, 1546
PstI	CTGCAG	1 cut(s)	2135
PstNI	CAGNNNCTG	1 cut(s)	281
PsyI	GACNNNGTC	1 cut(s)	1494
RsaI	GTAC	6 cut(s)	77, 211, 628, 1698, 1788, 1859
RsaNI	GTAC	6 cut(s)	76, 210, 627, 1697, 1787, 1858
RseI	CAYNNNNRTG	6 cut(s)	492, 1224, 1434, 1598, 1728, 2015
SacI	GAGCTC	2 cut(s)	17, 156
SalI	GTCGAC	1 cut(s)	56
SapI	GCTCTTC	2 cut(s)	1874, 2003
SaqAI	TTAA	5 cut(s)	246, 356, 756, 1407, 1565
SatI	GCNGC	6 cut(s)	172, 948, 989, 1386, 1591, 1774
Sau3AI	GATC	6 cut(s)	403, 559, 1107, 1805, 2040, 2044
SchI	GAGTC	2 cut(s)	830, 947
ScrFI	CCNGG	4 cut(s)	1142, 1494, 1539, 1782
SduI	GDGCHC	8 cut(s)	17, 66, 156, 823, 1051, 1339, 1944, 1998
SexAI	ACCWGGT	2 cut(s)	1140, 1492
SfaNI	GCATC	8 cut(s)	862, 913, 975, 1510, 1532, 1758, 1954, 2044
SfcI	CTRYAG	1 cut(s)	2131
SfoI	GGCGCC	2 cut(s)	133, 166
SfuI	TTCGAA	1 cut(s)	138
SgrDI	CGTCGACG	1 cut(s)	56
SinI	GGWCC	4 cut(s)	22, 1417, 1496, 1544
SmiI	ATTTAAAT	1 cut(s)	1566
SmiMI	CAYNNNNRTG	6 cut(s)	492, 1224, 1434, 1598, 1728, 2015
SmlI	CTYRAG	1 cut(s)	911
SmoI	CTYRAG	1 cut(s)	911
SpeI	ACTAGT	1 cut(s)	1288
SphI	GCATGC	1 cut(s)	668
Sse9I	AATT	7 cut(s)	827, 1187, 1404, 1561, 1567, 1575, 1644
SsiI	CCGC	9 cut(s)	43, 265, 883, 962, 1366, 1386, 1542, 1591, 1919
SspDI	GGCGCC	2 cut(s)	131, 164
SspI	AATATT	2 cut(s)	699, 1929
SspMI	CTAG	5 cut(s)	684, 798, 1182, 1289, 1736
SstI	GAGCTC	2 cut(s)	17, 156
StyD4I	CCNGG	4 cut(s)	1140, 1492, 1537, 1780
StyI	CCWWGG	2 cut(s)	683, 2002
SwaI	ATTTAAAT	1 cut(s)	1566
TaaI	ACNGT	5 cut(s)	7, 125, 262, 1201, 1678
TaiI	ACGT	6 cut(s)	57, 90, 367, 1094, 1728, 1865
TaqI	TCGA	7 cut(s)	57, 72, 108, 138, 768, 2043, 2099
TaqII	GACCGA	1 cut(s)	384
TasI	AATT	7 cut(s)	827, 1187, 1404, 1561, 1567, 1575, 1644
TatI	WGTACW	3 cut(s)	75, 209, 1857
TauI	GCSGC	2 cut(s)	1388, 1593
TfiI	GAWTC	1 cut(s)	929
Tru1I	TTAA	5 cut(s)	246, 356, 756, 1407, 1565
Tru9I	TTAA	5 cut(s)	246, 356, 756, 1407, 1565
TscAI	CASTG	6 cut(s)	24, 752, 766, 828, 1213, 1522
TseFI	GTSAC	4 cut(s)	365, 939, 1204, 2024
TseI	GCWGC	4 cut(s)	171, 947, 988, 1773
Tsp45I	GTSAC	4 cut(s)	365, 939, 1204, 2024
TspDTI	ATGAA	7 cut(s)	317, 504, 907, 1098, 1103, 1214, 2153
TspGWI	ACGGA	3 cut(s)	512, 1673, 1714
TspRI	CASTG	6 cut(s)	24, 752, 766, 828, 1213, 1522
Tth111I	GACNNNGTC	1 cut(s)	1494
Van91I	CCANNNNNTGG	3 cut(s)	1670, 2101, 2174
VpaK11BI	GGWCC	4 cut(s)	22, 1417, 1496, 1544
XapI	RAATTY	4 cut(s)	827, 1187, 1561, 1567
XceI	RCATGY	4 cut(s)	668, 707, 1164, 1433
XmaJI	CCTAGG	1 cut(s)	683
XmiI	GTMKAC	1 cut(s)	57
XspI	CTAG	5 cut(s)	684, 798, 1182, 1289, 1736
ZraI	GACGTC	1 cut(s)	55
Zsp2I	ATGCAT	3 cut(s)	666, 1166, 1525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.