pycom06g13100

Nodulin-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0017303
Physical Location & Seq
Forward (+)
18169486 .. 18172166
2681 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g13100.3

Sequence Viewer

Length: 1776 bp
ATGGTCCAACTCCATGGGAAGTTCAAGGCCTTCGCCAACAGCAGATGGCTGGTGTTCGTGTGTGCAATGTGGATCCAATCCTTCGCAGGAATAGGGTACCTGTTTGGGAGCATATCACCTGTGATCAAGTCCACCATGGGCTACAGCCAGAGACAGTTGGCAATTCTTGGAGTGGCCAAGGACTTGGGGGACTCTGTAGGGTTTGTGGCTGGAAGCCTGTCTGAAATATTGCCCACCTGGGGACTTTTGGTAATTGGAGCAGCCTTCAACCTTGTTGGGTATGGCTTGCTTTGGCTTATAGTCTCTCAGACTTTGCCTGCTTTCCCTCTCTGGGTGCTCTGCATTTGTATATATGTGGGAACCAACGGAGAGACCTTCTTCAACACAGCAGCATTGATATCATGTGTGCAAAACTTCCCCAAAAACCGGGGTCCTATAGTCGGGATTCTAAAAGGCTACGCCGGGTTGAGTGGCGCAATACTGACTCAGATTTATGCAATGATCAATGCTCCGAATGAATCCTCGTTGATTTTTATGATTGCAGTCGGTCCATCGATGGTTGCTGTTGCTCTGATGTTCATTGTTAGGCCTGTGGGAGGTCACAGGCAAGTGAGGCCATCTGACAATTCAAGCTTCCTATTTACTTACAGCGTTTGCCTTGTTCTGGCAGCTTATTTGTTGGGAGTTTTGCTCCTTGAGGATTTGGTCAACATAAGTCAAACTTTGATCACATTGTGTGCAGTTATCTTAATCATTCTCATTCTGCTTCCAATTGTGATCCCCGTCATACTGGTTTTCTTTTCCGAGCCAACACATTCGGCGCAGGAGAGCCTTCTCCTCGAATCGCAAAGTGAAGAGGCTGGAAAATCTGAGCGGGACAAGACTGAGGTCATTTTAAGTGAGGTGGAGAGTGAGGTGGAGGATGAGAAGTCCCGGGAAGTGGATTCGCTTCCCATGTCCGAAAGACAGAAAAGAATTGCTCAGCTTCAGGCTAAGCTGTTCCAGGCAGCTGCTGTCGGAGCAGTGAGAGTTAAGAGGCGAAAAGGCCCTCGTAGAGGAGAGAATTTTACTTTGTTACAGGCATTGGTAAAGGCAGATTTCTGGCTCATATTTGTTTCCCTACTGCTGGCTGCTGGTTCTGGTTTGACAATTATTGACAATTTAGGTCAAATAACCGAGTCACTTGGGTACGATGATTCGAGTATTTATGTTTCCATGATCAGCATTTGGAACTTTCTTGGACGCGTTGGGGGCGGTTACTTCTCTGAGATTATAGTAAGAGATTACGCATACCCTAGACCCGTGGCCATGGCGGTAGTTCAGGTCATCATGGCACTCGGGCTTTTCTACTATGCCATGGGATTGCCAGGGCAGATTTATGTGATAACTGTGCTGGTAGGACTTGGTTATGGTGCTCACTGGGCAATTTTGCCAGCTGCTGCCTCAGAGCTATTCGGGCTGAAGAGTTTCGGGGCCTTGTACAATTTTCTTACAATGGCAAATCCTGCTGGTTCTCTTATATTCTCAGAAGTGATTGCCAGTGGAATATACGATCACTACGCAAAGGAACAAGCCGTGCTCAGACGCCAAATTTCGGGTTCAATGCTCATTAAACCCCTCCGGGATGACGACTCACTCACTTGTGTTGGCACTGTATGCTATTCCATCACTTGTGGAATACTTTCAGGACTCTGCATTGTTGCTTGTGTCTTAAGTTTAATCGTTATTTATCGGACTAGGAGGGTTTATACGCAGCTCTATGGATCGAGCAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nodulin-like

Protein Analysis

592

Amino Acids

64.18

Weight (kDa)

7.47

Isoelectric Point (pI)

42.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017303)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g08410
malus_domestica MD06G1141000.v1.1 MD14G1156200.v1.1
prunus_persica Prupe.5G150100_v2.0.a1
pyrus_communis pycom06g13100 pycom14g12980
rosa_chinensis RchiOBHm_Chr7g0190031
rosa_laevigata RLG00000004570
rosa_multiflora Rmu_sc0004886.1_g000004
rosa_roxburghii Rroxscaffold_3G00264940
rosa_rugosa Rorug06G0501900
rosa_samantha Rh7BG109600
rosa_wichuraiana Rw7G009260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 96
AccB1I GGYRCC 1 cut(s) 96
AccBSI CCGCTC 1 cut(s) 874
AccII CGCG 1 cut(s) 1245
AciI CCGC 3 cut(s) 874, 1254, 1313
AclWI GGATC 4 cut(s) 67, 80, 772, 1771
AcoI YGGCCR 2 cut(s) 174, 1305
AcsI RAATTY 2 cut(s) 1063, 1590
AcuI CTGAAG 2 cut(s) 971, 1481
AcyI GRCGYC 1 cut(s) 1585
AdeI CACNNNGTG 1 cut(s) 735
AfaI GTAC 3 cut(s) 98, 1190, 1481
AflII CTTAAG 1 cut(s) 1711
AflIII ACRYGT 1 cut(s) 1243
AgsI TTSAA 5 cut(s) 25, 268, 382, 630, 1602
AjnI CCWGG 3 cut(s) 236, 1002, 1366
AluBI AGCT 8 cut(s) 633, 671, 985, 997, 1010, 1436, 1450, 1756
AluI AGCT 8 cut(s) 633, 671, 985, 997, 1010, 1436, 1450, 1756
Alw21I GWGCWC 3 cut(s) 339, 1417, 1581
Alw26I GTCTC 3 cut(s) 145, 307, 365
AlwI GGATC 4 cut(s) 67, 80, 772, 1771
AlwNI CAGNNNCTG 2 cut(s) 1013, 1439
Ama87I CYCGRG 2 cut(s) 933, 1337
AoxI GGCC 7 cut(s) 27, 174, 587, 614, 1045, 1305, 1473
ApeKI GCWGC 9 cut(s) 260, 389, 668, 1007, 1010, 1130, 1436, 1439, 1753
ApoI RAATTY 2 cut(s) 1063, 1590
Asp700I GAANNNNTTC 2 cut(s) 1466, 1681
Asp718I GGTACC 1 cut(s) 96
AspLEI GCGC 2 cut(s) 476, 823
AspS9I GGNCC 5 cut(s) 4, 431, 548, 1046, 1473
AsuC2I CCSGG 5 cut(s) 428, 463, 934, 935, 1622
AsuHPI GGTGA 1 cut(s) 108
AvaI CYCGRG 2 cut(s) 933, 1337
AvaII GGWCC 3 cut(s) 4, 431, 548
BalI TGGCCA 2 cut(s) 176, 1307
BamHI GGATCC 1 cut(s) 72
BanI GGYRCC 1 cut(s) 96
Bbv12I GWGCWC 3 cut(s) 339, 1417, 1581
BbvI GCAGC 9 cut(s) 272, 401, 680, 997, 1019, 1117, 1423, 1426, 1765
BccI CCATC 5 cut(s) 39, 550, 559, 625, 1673
BceAI ACGGC 1 cut(s) 1559
BciT130I CCWGG 3 cut(s) 238, 1004, 1368
BclI TGATCA 4 cut(s) 123, 501, 726, 1218
BcnI CCSGG 5 cut(s) 428, 463, 934, 935, 1622
BcoDI GTCTC 3 cut(s) 145, 307, 365
BfaI CTAG 2 cut(s) 1296, 1737
BfmI CTRYAG 3 cut(s) 142, 195, 435
BfrI CTTAAG 1 cut(s) 1711
BisI GCNGC 9 cut(s) 261, 390, 669, 1008, 1011, 1131, 1437, 1440, 1754
BlpI GCTNAGC 2 cut(s) 981, 993
BlsI GCNGC 9 cut(s) 262, 391, 670, 1009, 1012, 1132, 1438, 1441, 1755
Bme1390I CCNGG 8 cut(s) 238, 428, 463, 934, 935, 1004, 1368, 1622
Bme18I GGWCC 3 cut(s) 4, 431, 548
BmeT110I CYCGRG 2 cut(s) 933, 1337
BmgT120I GGNCC 5 cut(s) 4, 431, 548, 1046, 1473
BmiI GGNNCC 5 cut(s) 74, 98, 361, 432, 1474
BmrFI CCNGG 8 cut(s) 238, 428, 463, 934, 935, 1004, 1368, 1622
BmrI ACTGGG 1 cut(s) 1429
BmuI ACTGGG 1 cut(s) 1429
BoxI GACNNNNGTC 1 cut(s) 887
BplI GAGNNNNNCTC 2 cut(s) 675, 707
Bpu1102I GCTNAGC 2 cut(s) 981, 993
BpuEI CTTGAG 1 cut(s) 716
BpuMI CCSGG 5 cut(s) 428, 463, 934, 935, 1622
Bsa29I ATCGAT 1 cut(s) 554
BsaHI GRCGYC 1 cut(s) 1585
BsaI GGTCTC 1 cut(s) 365
Bse1I ACTGG 3 cut(s) 795, 1424, 1539
Bse3DI GCAATG 2 cut(s) 72, 504
BseBI CCWGG 3 cut(s) 238, 1004, 1368
BseCI ATCGAT 1 cut(s) 554
BseGI GGATG 2 cut(s) 928, 1630
BseMI GCAATG 2 cut(s) 72, 504
BseMII CTCAG 9 cut(s) 320, 500, 861, 876, 995, 1257, 1458, 1539, 1594
BseNI ACTGG 3 cut(s) 795, 1424, 1539
BseRI GAGGAG 2 cut(s) 827, 1071
BseXI GCAGC 9 cut(s) 272, 401, 680, 997, 1019, 1117, 1423, 1426, 1765
BsgI GTGCAG 1 cut(s) 759
Bsh1236I CGCG 1 cut(s) 1245
BshFI GGCC 7 cut(s) 29, 176, 589, 616, 1047, 1307, 1475
BshNI GGYRCC 1 cut(s) 96
BshVI ATCGAT 1 cut(s) 554
BsiHKAI GWGCWC 3 cut(s) 339, 1417, 1581
BsiHKCI CYCGRG 2 cut(s) 933, 1337
BsiSI CCGG 4 cut(s) 427, 462, 934, 1621
BslFI GGGAC 4 cut(s) 203, 255, 890, 916
BsmAI GTCTC 3 cut(s) 145, 307, 365
BsmFI GGGAC 4 cut(s) 203, 255, 890, 916
BsnI GGCC 7 cut(s) 29, 176, 589, 616, 1047, 1307, 1475
Bso31I GGTCTC 1 cut(s) 365
BsoBI CYCGRG 2 cut(s) 933, 1337
Bsp1286I GDGCHC 3 cut(s) 339, 1417, 1581
Bsp1407I TGTACA 1 cut(s) 1479
Bsp143I GATC 8 cut(s) 72, 123, 501, 726, 777, 1218, 1552, 1763
Bsp1720I GCTNAGC 2 cut(s) 981, 993
Bsp19I CCATGG 4 cut(s) 13, 135, 1308, 1356
BspACI CCGC 3 cut(s) 874, 1254, 1313
BspANI GGCC 7 cut(s) 29, 176, 589, 616, 1047, 1307, 1475
BspCNI CTCAG 9 cut(s) 319, 499, 862, 877, 994, 1258, 1457, 1538, 1593
BspDI ATCGAT 1 cut(s) 554
BspFNI CGCG 1 cut(s) 1245
BspLI GGNNCC 5 cut(s) 74, 98, 361, 432, 1474
BspPI GGATC 4 cut(s) 67, 80, 772, 1771
BspT107I GGYRCC 1 cut(s) 96
BspTI CTTAAG 1 cut(s) 1711
BspTNI GGTCTC 1 cut(s) 365
BsrBI CCGCTC 1 cut(s) 874
BsrDI GCAATG 2 cut(s) 72, 504
BsrGI TGTACA 1 cut(s) 1479
BsrI ACTGG 3 cut(s) 795, 1424, 1539
BssMI GATC 8 cut(s) 72, 123, 501, 726, 777, 1218, 1552, 1763
BssNI GRCGYC 1 cut(s) 1585
BssT1I CCWWGG 5 cut(s) 13, 135, 177, 1308, 1356
Bst2UI CCWGG 3 cut(s) 238, 1004, 1368
Bst4CI ACNGT 3 cut(s) 156, 1390, 1654
Bst6I CTCTTC 2 cut(s) 849, 1457
BstACI GRCGYC 1 cut(s) 1585
BstAFI CTTAAG 1 cut(s) 1711
BstAPI GCANNNNNTGC 2 cut(s) 1505, 1656
BstAUI TGTACA 1 cut(s) 1479
BstC8I GCNNGC 4 cut(s) 287, 318, 1128, 1434
BstDSI CCRYGG 5 cut(s) 13, 135, 1302, 1308, 1356
BstENI CCTNNNNNAGG 2 cut(s) 594, 1053
BstF5I GGATG 2 cut(s) 928, 1630
BstFNI CGCG 1 cut(s) 1245
BstHHI GCGC 2 cut(s) 476, 823
BstKTI GATC 8 cut(s) 75, 126, 504, 729, 780, 1221, 1555, 1766
BstMAI GTCTC 3 cut(s) 145, 307, 365
BstMBI GATC 8 cut(s) 72, 123, 501, 726, 777, 1218, 1552, 1763
BstMWI GCNNNNNNNGC 7 cut(s) 613, 1019, 1251, 1421, 1456, 1505, 1656
BstNI CCWGG 3 cut(s) 238, 1004, 1368
BstPAI GACNNNNGTC 1 cut(s) 887
BstSCI CCNGG 8 cut(s) 236, 426, 461, 932, 933, 1002, 1366, 1620
BstSFI CTRYAG 3 cut(s) 142, 195, 435
BstUI CGCG 1 cut(s) 1245
BstV1I GCAGC 9 cut(s) 272, 401, 680, 997, 1019, 1117, 1423, 1426, 1765
BstX2I RGATCY 1 cut(s) 72
BstXI CCANNNNNNTGG 2 cut(s) 14, 184
BstYI RGATCY 1 cut(s) 72
Bsu15I ATCGAT 1 cut(s) 554
BsuRI GGCC 7 cut(s) 29, 176, 589, 616, 1047, 1307, 1475
BsuTUI ATCGAT 1 cut(s) 554
BtgI CCRYGG 5 cut(s) 13, 135, 1302, 1308, 1356
BtsCI GGATG 2 cut(s) 928, 1630
BtsI GCAGTG 1 cut(s) 1029
BtsIMutI CAGTG 4 cut(s) 1029, 1417, 1546, 1650
Cac8I GCNNGC 4 cut(s) 287, 318, 1128, 1434
CaiI CAGNNNCTG 2 cut(s) 1013, 1439
CfoI GCGC 2 cut(s) 476, 823
Cfr13I GGNCC 5 cut(s) 4, 431, 548, 1046, 1473
Cfr9I CCCGGG 1 cut(s) 933
ClaI ATCGAT 1 cut(s) 554
CseI GACGC 2 cut(s) 1251, 1593
Csp6I GTAC 3 cut(s) 97, 1189, 1480
CviAII CATG 8 cut(s) 14, 136, 402, 955, 1216, 1309, 1330, 1357
CviQI GTAC 3 cut(s) 97, 1189, 1480
DpnI GATC 8 cut(s) 74, 125, 503, 728, 779, 1220, 1554, 1765
DpnII GATC 8 cut(s) 72, 123, 501, 726, 777, 1218, 1552, 1763
DraIII CACNNNGTG 1 cut(s) 735
EaeI YGGCCR 2 cut(s) 174, 1305
Eam1104I CTCTTC 2 cut(s) 849, 1457
EarI CTCTTC 2 cut(s) 849, 1457
Eco130I CCWWGG 5 cut(s) 13, 135, 177, 1308, 1356
Eco147I AGGCCT 2 cut(s) 29, 589
Eco31I GGTCTC 1 cut(s) 365
Eco32I GATATC 1 cut(s) 399
Eco47I GGWCC 3 cut(s) 4, 431, 548
Eco57I CTGAAG 2 cut(s) 971, 1481
Eco88I CYCGRG 2 cut(s) 933, 1337
EcoNI CCTNNNNNAGG 2 cut(s) 594, 1053
EcoO109I RGGNCCY 3 cut(s) 431, 1046, 1473
EcoRII CCWGG 3 cut(s) 236, 1002, 1366
EcoRV GATATC 1 cut(s) 399
EcoT14I CCWWGG 5 cut(s) 13, 135, 177, 1308, 1356
ErhI CCWWGG 5 cut(s) 13, 135, 177, 1308, 1356
FaeI CATG 8 cut(s) 17, 139, 405, 958, 1219, 1312, 1333, 1360
FalI AAGNNNNNCTT 2 cut(s) 706, 738
FaqI GGGAC 4 cut(s) 203, 255, 890, 916
FatI CATG 8 cut(s) 13, 135, 401, 954, 1215, 1308, 1329, 1356
FauI CCCGC 1 cut(s) 867
FbaI TGATCA 4 cut(s) 123, 501, 726, 1218
Fnu4HI GCNGC 9 cut(s) 261, 390, 669, 1008, 1011, 1131, 1437, 1440, 1754
FokI GGATG 2 cut(s) 935, 1637
Fsp4HI GCNGC 9 cut(s) 261, 390, 669, 1008, 1011, 1131, 1437, 1440, 1754
FspBI CTAG 2 cut(s) 1296, 1737
GlaI GCGC 2 cut(s) 475, 822
GluI GCNGC 9 cut(s) 261, 390, 669, 1008, 1011, 1131, 1437, 1440, 1754
HaeIII GGCC 7 cut(s) 29, 176, 589, 616, 1047, 1307, 1475
HapII CCGG 4 cut(s) 427, 462, 934, 1621
HgaI GACGC 2 cut(s) 1251, 1593
HhaI GCGC 2 cut(s) 476, 823
Hin1I GRCGYC 1 cut(s) 1585
Hin1II CATG 8 cut(s) 17, 139, 405, 958, 1219, 1312, 1333, 1360
Hin6I GCGC 2 cut(s) 474, 821
HinP1I GCGC 2 cut(s) 474, 821
HincII GTYRAC 1 cut(s) 709
HindII GTYRAC 1 cut(s) 709
HindIII AAGCTT 1 cut(s) 631
HpaII CCGG 4 cut(s) 427, 462, 934, 1621
HphI GGTGA 1 cut(s) 108
Hpy166II GTNNAC 2 cut(s) 132, 709
Hpy188III TCNNGA 2 cut(s) 442, 1686
Hpy8I GTNNAC 2 cut(s) 132, 709
HpyAV CCTTC 5 cut(s) 40, 91, 274, 385, 842
HpyCH4III ACNGT 3 cut(s) 156, 1390, 1654
HpyCH4V TGCA 7 cut(s) 65, 342, 409, 497, 542, 740, 1695
HpyF10VI GCNNNNNNNGC 7 cut(s) 613, 1019, 1251, 1421, 1456, 1505, 1656
Hsp92I GRCGYC 1 cut(s) 1585
Hsp92II CATG 8 cut(s) 17, 139, 405, 958, 1219, 1312, 1333, 1360
HspAI GCGC 2 cut(s) 474, 821
KpnI GGTACC 1 cut(s) 100
Ksp22I TGATCA 4 cut(s) 123, 501, 726, 1218
Kzo9I GATC 8 cut(s) 72, 123, 501, 726, 777, 1218, 1552, 1763
LmnI GCTCC 5 cut(s) 108, 257, 514, 696, 1019
Lsp1109I GCAGC 9 cut(s) 272, 401, 680, 997, 1019, 1117, 1423, 1426, 1765
MaeI CTAG 2 cut(s) 1296, 1737
MaeIII GTNAC 4 cut(s) 599, 1074, 1179, 1256
MalI GATC 8 cut(s) 74, 125, 503, 728, 779, 1220, 1554, 1765
MbiI CCGCTC 1 cut(s) 874
MboI GATC 8 cut(s) 72, 123, 501, 726, 777, 1218, 1552, 1763
MboII GAAGA 3 cut(s) 370, 866, 1474
MfeI CAATTG 1 cut(s) 771
MflI RGATCY 1 cut(s) 72
MhlI GDGCHC 3 cut(s) 339, 1417, 1581
MlsI TGGCCA 2 cut(s) 176, 1307
MluI ACGCGT 1 cut(s) 1243
MluNI TGGCCA 2 cut(s) 176, 1307
MlyI GAGTC 5 cut(s) 185, 478, 1187, 1625, 1683
MmeI TCCRAC 2 cut(s) 31, 997
Mox20I TGGCCA 2 cut(s) 176, 1307
MroXI GAANNNNTTC 2 cut(s) 1466, 1681
MscI TGGCCA 2 cut(s) 176, 1307
MseI TTAA 6 cut(s) 749, 896, 1032, 1611, 1712, 1718
Msp20I TGGCCA 2 cut(s) 176, 1307
MspA1I CMGCKG 2 cut(s) 1010, 1436
MspCI CTTAAG 1 cut(s) 1711
MspI CCGG 4 cut(s) 427, 462, 934, 1621
MspR9I CCNGG 8 cut(s) 238, 428, 463, 934, 935, 1004, 1368, 1622
MunI CAATTG 1 cut(s) 771
MvaI CCWGG 3 cut(s) 238, 1004, 1368
MvnI CGCG 1 cut(s) 1245
MwoI GCNNNNNNNGC 7 cut(s) 613, 1019, 1251, 1421, 1456, 1505, 1656
NciI CCSGG 5 cut(s) 428, 463, 934, 935, 1622
NcoI CCATGG 4 cut(s) 13, 135, 1308, 1356
NdeII GATC 8 cut(s) 72, 123, 501, 726, 777, 1218, 1552, 1763
NlaIII CATG 8 cut(s) 17, 139, 405, 958, 1219, 1312, 1333, 1360
NlaIV GGNNCC 5 cut(s) 74, 98, 361, 432, 1474
NmuCI GTSAC 2 cut(s) 599, 1179
PceI AGGCCT 2 cut(s) 29, 589
PdmI GAANNNNTTC 2 cut(s) 1466, 1681
PfeI GAWTC 5 cut(s) 445, 518, 842, 944, 1196
PfoI TCCNGGA 1 cut(s) 1620
PkrI GCNGC 9 cut(s) 262, 391, 670, 1009, 1012, 1132, 1438, 1441, 1755
PleI GAGTC 5 cut(s) 185, 478, 1186, 1625, 1683
PpsI GAGTC 5 cut(s) 185, 478, 1186, 1625, 1683
PpuMI RGGWCCY 1 cut(s) 431
PshAI GACNNNNGTC 1 cut(s) 887
Psp5II RGGWCCY 1 cut(s) 431
Psp6I CCWGG 3 cut(s) 236, 1002, 1366
PspGI CCWGG 3 cut(s) 236, 1002, 1366
PspN4I GGNNCC 5 cut(s) 74, 98, 361, 432, 1474
PspPI GGNCC 5 cut(s) 4, 431, 548, 1046, 1473
PspPPI RGGWCCY 1 cut(s) 431
PstNI CAGNNNCTG 2 cut(s) 1013, 1439
PsuI RGATCY 1 cut(s) 72
PvuII CAGCTG 2 cut(s) 1010, 1436
RsaI GTAC 3 cut(s) 98, 1190, 1481
RsaNI GTAC 3 cut(s) 97, 1189, 1480
SaqAI TTAA 6 cut(s) 749, 896, 1032, 1611, 1712, 1718
SatI GCNGC 9 cut(s) 261, 390, 669, 1008, 1011, 1131, 1437, 1440, 1754
Sau3AI GATC 8 cut(s) 72, 123, 501, 726, 777, 1218, 1552, 1763
Sau96I GGNCC 5 cut(s) 4, 431, 548, 1046, 1473
SchI GAGTC 5 cut(s) 185, 478, 1187, 1625, 1683
ScrFI CCNGG 8 cut(s) 238, 428, 463, 934, 935, 1004, 1368, 1622
SduI GDGCHC 3 cut(s) 339, 1417, 1581
SfcI CTRYAG 3 cut(s) 142, 195, 435
SinI GGWCC 3 cut(s) 4, 431, 548
SmaI CCCGGG 1 cut(s) 935
SmlI CTYRAG 2 cut(s) 695, 1711
SmoI CTYRAG 2 cut(s) 695, 1711
SseBI AGGCCT 2 cut(s) 29, 589
SsiI CCGC 3 cut(s) 874, 1254, 1313
SspI AATATT 1 cut(s) 228
SspMI CTAG 2 cut(s) 1296, 1737
StuI AGGCCT 2 cut(s) 29, 589
StyD4I CCNGG 8 cut(s) 236, 426, 461, 932, 933, 1002, 1366, 1620
StyI CCWWGG 5 cut(s) 13, 135, 177, 1308, 1356
TaaI ACNGT 3 cut(s) 156, 1390, 1654
TaqI TCGA 4 cut(s) 554, 840, 1199, 1766
TaqII GACCGA 1 cut(s) 536
TatI WGTACW 1 cut(s) 1479
TfiI GAWTC 5 cut(s) 445, 518, 842, 944, 1196
Tru1I TTAA 6 cut(s) 749, 896, 1032, 1611, 1712, 1718
Tru9I TTAA 6 cut(s) 749, 896, 1032, 1611, 1712, 1718
TscAI CASTG 4 cut(s) 1029, 1424, 1546, 1657
TseFI GTSAC 2 cut(s) 599, 1179
TseI GCWGC 9 cut(s) 260, 389, 668, 1007, 1010, 1130, 1436, 1439, 1753
Tsp45I GTSAC 2 cut(s) 599, 1179
TspDTI ATGAA 2 cut(s) 531, 568
TspGWI ACGGA 1 cut(s) 381
TspMI CCCGGG 1 cut(s) 933
TspRI CASTG 4 cut(s) 1029, 1424, 1546, 1657
Vha464I CTTAAG 1 cut(s) 1711
VpaK11BI GGWCC 3 cut(s) 4, 431, 548
XagI CCTNNNNNAGG 2 cut(s) 594, 1053
XapI RAATTY 2 cut(s) 1063, 1590
XmaI CCCGGG 1 cut(s) 933
XmnI GAANNNNTTC 2 cut(s) 1466, 1681
XspI CTAG 2 cut(s) 1296, 1737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.