Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0016338

Physical Location & Seq

Genomic Coordinates Reverse (-)

22207065 .. 22209979

Gene Structure 2915 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGGCGGGTGACACAGACAGCCCGTCTTCTCCCCCAAACAAACGGCGGAAAACCCTAAAATCAAAAATCGAAGAGGACCCAATTTCCCACGAACCCCAAGAACCCGAAAATTCATCTTCTCAGCGATGCCCAATTTGCTTCCTGGAAGGTGGCAAAGTGATCAGAGGCGAAATCGATTGCTGCGACCACTACTTCTGCTTTCTCTGCATTATGGAGTGGTCGAAGAAGGAGTCGCGCTGCCCACTCTGCCGCCGCAGGTTCACCACCATTCGCCGGCCGCCGAAAGACGGCGTCTTTGCCCGCGAGCGAGTCGTCAAGATTCCTGCTTGTGATCATGCTCACCATCCATCTAGTAACATGGCTGGGCAAGTTCTTCGTTACGAAGAAGTTACGTGTCAAGTGTGCCACGGCATGGCAGATGAATATCTTCTGTTGCTCTGCGATATTTGCGATTCAGCTGCTCATACGTACTGTGTTGGACTGGGTAATACCGTGCCCGAAGGTGATTGGTTCTGCCTTGACTGCACTACCATTAGGGGAGAACACGATGACAATGTTGATTCTAGTTCTGATTCTGACGATGAATATCTTTTAGGACCATCCGACCCAAATATATCGGCCTTTGACATTGTACAAGAATCATGTAGTTATAGCTCAGTGGCTAATAGATATCTCCCAAGAATCCCTAGAATTCCAAACCACTTTGCACTTCCAGTTGTCCGTGACAGGTCTACCAGTATCGCAGATGAAGTAATTACCACGCCAGCAGAAACACTACCAAGTGTTGCAGCATCAGGTGCAAGAACATTGGTTCACCGTCGCTATGTGTGCACTCGAGTACAAGAACTCCGTGAAAATTGGAATGCCATCCAAAGTGGTTCATTGAGCTTCTCTTCGAGTTCAATTAAATCTGGCTGCATTAGTAGTCAAAAGCCTGAAAATGGTGTGGTAATCCATGAAAGATCAGGCCAGACACAGTCCTCAGCTTCCACAAGTGGTCAACAACCGAGAAATCGAGACAGCTGTGGCTTAAATGATATCGACAAAGCATGGAAAATGATGGAAATTGCAAAGTCAAGAATGGACGCTGGTAAAAAGTGCAGCGGCAGTTCCGTCAACACAACAAATGATTCAAGAAAACGAACTACTGTAAATCCTTGTTTTGGTAAATCAAGTCAAGCACAATCCTCATCTTCCGCAGGGTATTATCGACCAATAAATCAAGTTGGTTGTGGAACACGTGACATTAAGTCGAAACAGCACGTTCATACAAACACTGGCAGCAGCAGTGGCGTTCAGCACCCAAAACTTCTTTCTAGGATGTCAAGTGCTTCAAAAGAAGCAACAAATGTAACATCGAGTTTTGATATTTTGAGAAGCCAACAACTTGGAGCCTGCGATCGGAGAAAAACTGGAAAGGAGTCCTACAAATGCAGTCCTCGTGAAAAAGAAACAATAAGACATCAACCTGTAAAGTTGGAAAAGGATACGCAGTTTAGGGTTACGCCTCAGGATGCAGTCGCACCTAGCGAAGGCCCTTCAGCTAGACATATAAAGCAGGCTGCAGCAAACATCATTCATGAGCAAAATAGGTCTGCTTGTTCAGTAAATGAAGGAGCACCTTCTTCTTTTTATGCCAAACCACCGATCAGTACTTCTTCCAGTAAATTAGACGCGCAGAAGAGAAATATTGGACGGGGAGAGAGCTGTTTGGAAGGGCAATCAAGAAAAGATGCCAAAAGTGAAATCGCGTCTGTTGTGAAGGTGAACTTGAAGATGTTAACCAAAGACAAACCATTAGGAGTTGATGCATTCAAGGAAATCGCAAGGCTTTCCACGCATACCATTTATGGCGCTTGTGGTTTAAAGCATTCAAAGTCTGGTATGTACTCCTTCCCTAGCTTAGAATGCCCCCACACTGAGCAGTTTCAGCCACCGCACAAACCCAGTCCGATGCCAAACTCTTGTCGAGCTTGCTTTGATGGTTTTGTGAAAGGCGTAGTCAGTTCTATTCTGTGTGGTTCAGCTGGTTCCGCAAAATTAAGCCAAGCTCCATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0006139 GO:0006351 GO:0006366 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0019899 GO:0019904 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0070063 GO:0071704 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD zf-RING_2

Protein Analysis

687

Amino Acids

75.06

Weight (kDa)

8.73

Isoelectric Point (pI)

62.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	42 - 84	3.6e-07	Ring finger domain
PHD	PF00628	132 - 175	2e-07	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016338)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g13310
malus_domestica	MD06G1206300.v1.1
prunus_persica	Prupe.5G210700_v2.0.a1 Prupe.5G210700_v2.0.a1
pyrus_communis	pycom06g18420
rosa_chinensis	RchiOBHm_Chr7g0183831
rosa_laevigata	RLG00000005017
rosa_multiflora	Rmu_sc0013966.1_g000004
rosa_roxburghii	Rroxscaffold_3G00270150
rosa_rugosa	Rorug06G0461100
rosa_samantha	Rh7AG061800 Rh7BG061900 Rh7CG063400 Rh7DG061600
rosa_wichuraiana	Rw7G005110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	246
AccB7I	CCANNNNNTGG	1 cut(s)	412
AccI	GTMKAC	1 cut(s)	731
AccII	CGCG	4 cut(s)	235, 303, 1676, 1751
AcoI	YGGCCR	1 cut(s)	275
AcsI	RAATTY	2 cut(s)	109, 690
AcuI	CTGAAG	1 cut(s)	1524
AcvI	CACGTG	1 cut(s)	1241
AcyI	GRCGYC	1 cut(s)	291
AfaI	GTAC	5 cut(s)	470, 633, 840, 1654, 1889
AfiI	CCNNNNNNNGG	7 cut(s)	273, 287, 412, 941, 1163, 1401, 1532
AflIII	ACRYGT	2 cut(s)	392, 1238
AgsI	TTSAA	6 cut(s)	903, 1134, 1335, 1774, 1816, 1875
AhdI	GACNNNNNGTC	2 cut(s)	22, 1249
AjnI	CCWGG	1 cut(s)	141
AjuI	GAANNNNNNNTTGG	2 cut(s)	1297, 1329
Alw21I	GWGCWC	2 cut(s)	833, 1621
Alw26I	GTCTC	1 cut(s)	1011
Alw44I	GTGCAC	1 cut(s)	829
Ama87I	CYCGRG	1 cut(s)	834
AoxI	GGCC	4 cut(s)	275, 618, 967, 1534
ApaLI	GTGCAC	1 cut(s)	829
ApoI	RAATTY	2 cut(s)	109, 690
ArsI	GACNNNNNNTTYG	4 cut(s)	215, 247, 278, 310
Asp700I	GAANNNNTTC	1 cut(s)	426
AspLEI	GCGC	3 cut(s)	237, 1678, 1856
AspS9I	GGNCC	3 cut(s)	76, 596, 1535
AsuHPI	GGTGA	6 cut(s)	20, 253, 332, 515, 806, 1777
AvaI	CYCGRG	1 cut(s)	834
AvaII	GGWCC	2 cut(s)	76, 596
AxyI	CCTNAGG	1 cut(s)	1509
BaeGI	GKGCMC	2 cut(s)	498, 833
BauI	CACGAG	1 cut(s)	1440
BbrPI	CACGTG	1 cut(s)	1241
BbsI	GAAGAC	1 cut(s)	18
Bbv12I	GWGCWC	2 cut(s)	833, 1621
BbvCI	CCTCAGC	1 cut(s)	982
BccI	CCATC	6 cut(s)	351, 355, 607, 875, 1054, 1976
BceAI	ACGGC	3 cut(s)	59, 304, 424
BcgI	CGANNNNNNTGC	4 cut(s)	356, 390, 440, 474
BciT130I	CCWGG	1 cut(s)	143
BciVI	GTATCC	1 cut(s)	1480
BclI	TGATCA	2 cut(s)	159, 331
BcoDI	GTCTC	1 cut(s)	1011
BfaI	CTAG	7 cut(s)	351, 564, 687, 1317, 1527, 1545, 1899
BfmI	CTRYAG	1 cut(s)	1563
BfoI	RGCGCY	1 cut(s)	1857
BfuAI	ACCTGC	1 cut(s)	246
BfuI	GTATCC	1 cut(s)	1480
BmcAI	AGTACT	1 cut(s)	1654
Bme1390I	CCNGG	1 cut(s)	143
Bme18I	GGWCC	2 cut(s)	76, 596
BmeRI	GACNNNNNGTC	2 cut(s)	22, 1249
BmeT110I	CYCGRG	1 cut(s)	834
BmgT120I	GGNCC	3 cut(s)	76, 596, 1535
BmiI	GGNNCC	3 cut(s)	78, 1393, 2032
BmrFI	CCNGG	1 cut(s)	143
BmrI	ACTGGG	2 cut(s)	491, 1941
BmsI	GCATC	6 cut(s)	116, 800, 1504, 1723, 1798, 1944
BmuI	ACTGGG	2 cut(s)	491, 1941
BpiI	GAAGAC	1 cut(s)	18
Bpu10I	CCTNAGC	1 cut(s)	982
Bsa29I	ATCGAT	1 cut(s)	174
BsaAI	YACGTR	3 cut(s)	393, 468, 1241
BsaBI	GATNNNNATC	2 cut(s)	423, 585
BsaHI	GRCGYC	1 cut(s)	291
BsaJI	CCNNGG	1 cut(s)	406
BsaXI	ACNNNNNCTCC	2 cut(s)	831, 861
Bsc4I	CCNNNNNNNGG	7 cut(s)	273, 287, 412, 941, 1163, 1401, 1532
Bse118I	RCCGGY	1 cut(s)	273
Bse1I	ACTGG	7 cut(s)	486, 713, 735, 1282, 1417, 1662, 1947
Bse21I	CCTNAGG	1 cut(s)	1509
Bse8I	GATNNNNATC	2 cut(s)	423, 585
BseBI	CCWGG	1 cut(s)	143
BseCI	ATCGAT	1 cut(s)	174
BseDI	CCNNGG	1 cut(s)	406
BseGI	GGATG	5 cut(s)	343, 599, 867, 1326, 1519
BseJI	GATNNNNATC	2 cut(s)	423, 585
BseLI	CCNNNNNNNGG	7 cut(s)	273, 287, 412, 941, 1163, 1401, 1532
BseMII	CTCAG	5 cut(s)	134, 669, 996, 1523, 1911
BseNI	ACTGG	7 cut(s)	486, 713, 735, 1282, 1417, 1662, 1947
BseSI	GKGCMC	2 cut(s)	498, 833
BseX3I	CGGCCG	1 cut(s)	275
BseYI	CCCAGC	1 cut(s)	362
BsgI	GTGCAG	2 cut(s)	508, 1120
Bsh1236I	CGCG	4 cut(s)	235, 303, 1676, 1751
Bsh1285I	CGRYCG	2 cut(s)	278, 1402
BshFI	GGCC	4 cut(s)	277, 620, 969, 1536
BshVI	ATCGAT	1 cut(s)	174
BsiEI	CGRYCG	2 cut(s)	278, 1402
BsiHKAI	GWGCWC	2 cut(s)	833, 1621
BsiHKCI	CYCGRG	1 cut(s)	834
BsiSI	CCGG	1 cut(s)	274
BslI	CCNNNNNNNGG	7 cut(s)	273, 287, 412, 941, 1163, 1401, 1532
BsmAI	GTCTC	1 cut(s)	1011
BsmI	GAATGC	4 cut(s)	868, 1811, 1870, 1913
BsnI	GGCC	4 cut(s)	277, 620, 969, 1536
BsoBI	CYCGRG	1 cut(s)	834
Bsp1286I	GDGCHC	3 cut(s)	498, 833, 1621
Bsp1407I	TGTACA	1 cut(s)	631
Bsp143I	GATC	5 cut(s)	159, 331, 962, 1399, 1647
BspANI	GGCC	4 cut(s)	277, 620, 969, 1536
BspCNI	CTCAG	5 cut(s)	133, 668, 995, 1522, 1912
BspDI	ATCGAT	1 cut(s)	174
BspFNI	CGCG	4 cut(s)	235, 303, 1676, 1751
BspHI	TCATGA	1 cut(s)	1579
BspLI	GGNNCC	3 cut(s)	78, 1393, 2032
BspMAI	CTGCAG	1 cut(s)	1567
BspMI	ACCTGC	1 cut(s)	246
BsrFI	RCCGGY	1 cut(s)	273
BsrGI	TGTACA	1 cut(s)	631
BsrI	ACTGG	7 cut(s)	486, 713, 735, 1282, 1417, 1662, 1947
BssAI	RCCGGY	1 cut(s)	273
BssECI	CCNNGG	1 cut(s)	406
BssMI	GATC	5 cut(s)	159, 331, 962, 1399, 1647
BssNI	GRCGYC	1 cut(s)	291
BssSI	CACGAG	1 cut(s)	1440
Bst2BI	CACGAG	1 cut(s)	1440
Bst2UI	CCWGG	1 cut(s)	143
Bst4CI	ACNGT	5 cut(s)	473, 493, 818, 978, 1150
Bst6I	CTCTTC	3 cut(s)	66, 898, 1676
BstACI	GRCGYC	1 cut(s)	291
BstAPI	GCANNNNNTGC	1 cut(s)	797
BstAUI	TGTACA	1 cut(s)	631
BstBAI	YACGTR	3 cut(s)	393, 468, 1241
BstC8I	GCNNGC	7 cut(s)	275, 301, 305, 765, 1396, 1560, 1975
BstDEI	CTNAG	6 cut(s)	120, 655, 982, 1509, 1903, 1920
BstDSI	CCRYGG	1 cut(s)	406
BstENI	CCTNNNNNAGG	1 cut(s)	1530
BstF5I	GGATG	5 cut(s)	343, 599, 867, 1326, 1519
BstFNI	CGCG	4 cut(s)	235, 303, 1676, 1751
BstH2I	RGCGCY	1 cut(s)	1857
BstHHI	GCGC	3 cut(s)	237, 1678, 1856
BstKTI	GATC	5 cut(s)	162, 334, 965, 1402, 1650
BstMAI	GTCTC	1 cut(s)	1011
BstMBI	GATC	5 cut(s)	159, 331, 962, 1399, 1647
BstMCI	CGRYCG	2 cut(s)	278, 1402
BstNI	CCWGG	1 cut(s)	143
BstSCI	CCNGG	1 cut(s)	141
BstSFI	CTRYAG	1 cut(s)	1563
BstSLI	GKGCMC	2 cut(s)	498, 833
BstSNI	TACGTA	1 cut(s)	468
BstUI	CGCG	4 cut(s)	235, 303, 1676, 1751
BstV2I	GAAGAC	1 cut(s)	18
BstXI	CCANNNNNNTGG	1 cut(s)	1388
BstZI	CGGCCG	1 cut(s)	275
Bsu15I	ATCGAT	1 cut(s)	174
Bsu36I	CCTNAGG	1 cut(s)	1509
BsuI	GTATCC	1 cut(s)	1480
BsuRI	GGCC	4 cut(s)	277, 620, 969, 1536
BsuTUI	ATCGAT	1 cut(s)	174
BtgI	CCRYGG	1 cut(s)	406
BtgZI	GCGATG	1 cut(s)	139
BtsCI	GGATG	5 cut(s)	343, 599, 867, 1326, 1519
BtsI	GCAGTG	1 cut(s)	1294
BtsIMutI	CAGTG	4 cut(s)	663, 1275, 1294, 1917
BveI	ACCTGC	1 cut(s)	246
Cac8I	GCNNGC	7 cut(s)	275, 301, 305, 765, 1396, 1560, 1975
CciI	TCATGA	1 cut(s)	1579
CfoI	GCGC	3 cut(s)	237, 1678, 1856
Cfr10I	RCCGGY	1 cut(s)	273
Cfr13I	GGNCC	3 cut(s)	76, 596, 1535
ClaI	ATCGAT	1 cut(s)	174
CseI	GACGC	4 cut(s)	280, 1094, 1682, 1740
Csp6I	GTAC	5 cut(s)	469, 632, 839, 1653, 1888
CviAII	CATG	7 cut(s)	335, 358, 412, 642, 956, 1050, 1580
CviQI	GTAC	5 cut(s)	469, 632, 839, 1653, 1888
DdeI	CTNAG	6 cut(s)	120, 655, 982, 1509, 1903, 1920
DpnI	GATC	5 cut(s)	161, 333, 964, 1401, 1649
DpnII	GATC	5 cut(s)	159, 331, 962, 1399, 1647
DraI	TTTAAA	1 cut(s)	1866
DriI	GACNNNNNGTC	2 cut(s)	22, 1249
EaeI	YGGCCR	1 cut(s)	275
EagI	CGGCCG	1 cut(s)	275
Eam1104I	CTCTTC	3 cut(s)	66, 898, 1676
Eam1105I	GACNNNNNGTC	2 cut(s)	22, 1249
EarI	CTCTTC	3 cut(s)	66, 898, 1676
EciI	GGCGGA	1 cut(s)	61
EclXI	CGGCCG	1 cut(s)	275
Eco105I	TACGTA	1 cut(s)	468
Eco32I	GATATC	2 cut(s)	671, 1039
Eco47I	GGWCC	2 cut(s)	76, 596
Eco52I	CGGCCG	1 cut(s)	275
Eco57I	CTGAAG	1 cut(s)	1524
Eco72I	CACGTG	1 cut(s)	1241
Eco81I	CCTNAGG	1 cut(s)	1509
Eco88I	CYCGRG	1 cut(s)	834
EcoNI	CCTNNNNNAGG	1 cut(s)	1530
EcoO109I	RGGNCCY	2 cut(s)	76, 1535
EcoRI	GAATTC	1 cut(s)	690
EcoRII	CCWGG	1 cut(s)	141
EcoRV	GATATC	2 cut(s)	671, 1039
EcoT22I	ATGCAT	1 cut(s)	1813
FaeI	CATG	7 cut(s)	338, 361, 415, 645, 959, 1053, 1583
FalI	AAGNNNNNCTT	2 cut(s)	1754, 1786
FatI	CATG	7 cut(s)	334, 357, 411, 641, 955, 1049, 1579
FauI	CCCGC	1 cut(s)	308
FbaI	TGATCA	2 cut(s)	159, 331
FblI	GTMKAC	1 cut(s)	731
FokI	GGATG	5 cut(s)	330, 586, 854, 1333, 1526
FspBI	CTAG	7 cut(s)	351, 564, 687, 1317, 1527, 1545, 1899
GlaI	GCGC	3 cut(s)	236, 1677, 1855
GsaI	CCCAGC	1 cut(s)	366
HaeII	RGCGCY	1 cut(s)	1857
HaeIII	GGCC	4 cut(s)	277, 620, 969, 1536
HapII	CCGG	1 cut(s)	274
HgaI	GACGC	4 cut(s)	280, 1094, 1682, 1740
HhaI	GCGC	3 cut(s)	237, 1678, 1856
Hin1I	GRCGYC	1 cut(s)	291
Hin1II	CATG	7 cut(s)	338, 361, 415, 645, 959, 1053, 1583
Hin6I	GCGC	3 cut(s)	235, 1676, 1854
HinP1I	GCGC	3 cut(s)	235, 1676, 1854
HincII	GTYRAC	3 cut(s)	1001, 1117, 1782
HindII	GTYRAC	3 cut(s)	1001, 1117, 1782
HpaI	GTTAAC	1 cut(s)	1782
HpaII	CCGG	1 cut(s)	274
HphI	GGTGA	6 cut(s)	20, 253, 332, 515, 806, 1777
Hpy166II	GTNNAC	8 cut(s)	261, 732, 814, 831, 1001, 1117, 1768, 1782
Hpy188I	TCNGA	6 cut(s)	164, 571, 577, 604, 1404, 1953
Hpy188III	TCNNGA	8 cut(s)	316, 1016, 1077, 1134, 1442, 1511, 1580, 1725
Hpy8I	GTNNAC	8 cut(s)	261, 732, 814, 831, 1001, 1117, 1768, 1782
Hpy99I	CGWCG	1 cut(s)	822
HpyCH4III	ACNGT	5 cut(s)	473, 493, 818, 978, 1150
HpyCH4IV	ACGT	4 cut(s)	392, 467, 1240, 1263
HpyF3I	CTNAG	6 cut(s)	120, 655, 982, 1509, 1903, 1920
HpySE526I	ACGT	4 cut(s)	392, 467, 1240, 1263
Hsp92I	GRCGYC	1 cut(s)	291
Hsp92II	CATG	7 cut(s)	338, 361, 415, 645, 959, 1053, 1583
HspAI	GCGC	3 cut(s)	235, 1676, 1854
KroI	GCCGGC	1 cut(s)	273
KroNI	GCCGGC	1 cut(s)	275
Ksp22I	TGATCA	2 cut(s)	159, 331
KspAI	GTTAAC	1 cut(s)	1782
Kzo9I	GATC	5 cut(s)	159, 331, 962, 1399, 1647
LmnI	GCTCC	3 cut(s)	1391, 1616, 2056
LweI	GCATC	6 cut(s)	116, 800, 1504, 1723, 1798, 1944
MaeI	CTAG	7 cut(s)	351, 564, 687, 1317, 1527, 1545, 1899
MaeII	ACGT	4 cut(s)	392, 467, 1240, 1263
MaeIII	GTNAC	8 cut(s)	8, 353, 377, 388, 722, 1241, 1351, 1501
MalI	GATC	5 cut(s)	161, 333, 964, 1401, 1649
MboI	GATC	5 cut(s)	159, 331, 962, 1399, 1647
MhlI	GDGCHC	3 cut(s)	498, 833, 1621
MlyI	GAGTC	3 cut(s)	239, 318, 1430
MmeI	TCCRAC	3 cut(s)	457, 627, 1458
MnlI	CCTC	6 cut(s)	67, 158, 991, 1198, 1449, 1518
Mph1103I	ATGCAT	1 cut(s)	1813
MroNI	GCCGGC	1 cut(s)	273
MroXI	GAANNNNTTC	1 cut(s)	426
MseI	TTAA	7 cut(s)	906, 1031, 1248, 1781, 1865, 2042, 2059
MspA1I	CMGCKG	4 cut(s)	458, 1023, 1104, 2027
MspI	CCGG	1 cut(s)	274
MspR9I	CCNGG	1 cut(s)	143
Mva1269I	GAATGC	4 cut(s)	868, 1811, 1870, 1913
MvaI	CCWGG	1 cut(s)	143
MvnI	CGCG	4 cut(s)	235, 303, 1676, 1751
NaeI	GCCGGC	1 cut(s)	275
NdeII	GATC	5 cut(s)	159, 331, 962, 1399, 1647
NgoMIV	GCCGGC	1 cut(s)	273
NlaIII	CATG	7 cut(s)	338, 361, 415, 645, 959, 1053, 1583
NlaIV	GGNNCC	3 cut(s)	78, 1393, 2032
NmuCI	GTSAC	3 cut(s)	8, 722, 1241
NsiI	ATGCAT	1 cut(s)	1813
PaeR7I	CTCGAG	1 cut(s)	834
PagI	TCATGA	1 cut(s)	1579
PcsI	WCGNNNNNNNCGW	2 cut(s)	180, 1527
PctI	GAATGC	4 cut(s)	868, 1811, 1870, 1913
PdiI	GCCGGC	1 cut(s)	275
PdmI	GAANNNNTTC	1 cut(s)	426
PfeI	GAWTC	7 cut(s)	319, 452, 560, 572, 638, 681, 1130
PflFI	GACNNNGTC	2 cut(s)	290, 976
PflMI	CCANNNNNTGG	1 cut(s)	412
PfoI	TCCNGGA	1 cut(s)	141
Ple19I	CGATCG	1 cut(s)	1402
PleI	GAGTC	3 cut(s)	238, 317, 1429
PmaCI	CACGTG	1 cut(s)	1241
PmlI	CACGTG	1 cut(s)	1241
PpsI	GAGTC	3 cut(s)	238, 317, 1429
Ppu21I	YACGTR	3 cut(s)	393, 468, 1241
PpuMI	RGGWCCY	1 cut(s)	76
Psp5II	RGGWCCY	1 cut(s)	76
Psp6I	CCWGG	1 cut(s)	141
PspCI	CACGTG	1 cut(s)	1241
PspFI	CCCAGC	1 cut(s)	362
PspGI	CCWGG	1 cut(s)	141
PspN4I	GGNNCC	3 cut(s)	78, 1393, 2032
PspPI	GGNCC	3 cut(s)	76, 596, 1535
PspPPI	RGGWCCY	1 cut(s)	76
PspXI	VCTCGAGB	1 cut(s)	834
PstI	CTGCAG	1 cut(s)	1567
PsyI	GACNNNGTC	2 cut(s)	290, 976
PvuI	CGATCG	1 cut(s)	1402
PvuII	CAGCTG	3 cut(s)	458, 1023, 2027
RsaI	GTAC	5 cut(s)	470, 633, 840, 1654, 1889
RsaNI	GTAC	5 cut(s)	469, 632, 839, 1653, 1888
SaqAI	TTAA	7 cut(s)	906, 1031, 1248, 1781, 1865, 2042, 2059
Sau3AI	GATC	5 cut(s)	159, 331, 962, 1399, 1647
Sau96I	GGNCC	3 cut(s)	76, 596, 1535
ScaI	AGTACT	1 cut(s)	1654
SchI	GAGTC	3 cut(s)	239, 318, 1430
ScrFI	CCNGG	1 cut(s)	143
SduI	GDGCHC	3 cut(s)	498, 833, 1621
SfaNI	GCATC	6 cut(s)	116, 800, 1504, 1723, 1798, 1944
SfcI	CTRYAG	1 cut(s)	1563
Sfr274I	CTCGAG	1 cut(s)	834
SinI	GGWCC	2 cut(s)	76, 596
SlaI	CTCGAG	1 cut(s)	834
SmlI	CTYRAG	1 cut(s)	834
SmoI	CTYRAG	1 cut(s)	834
SnaBI	TACGTA	1 cut(s)	468
SspI	AATATT	1 cut(s)	1690
SspMI	CTAG	7 cut(s)	351, 564, 687, 1317, 1527, 1545, 1899
StyD4I	CCNGG	1 cut(s)	141
TaaI	ACNGT	5 cut(s)	473, 493, 818, 978, 1150
TaiI	ACGT	4 cut(s)	395, 470, 1243, 1266
TatI	WGTACW	4 cut(s)	631, 838, 1652, 1887
TauI	GCSGC	4 cut(s)	252, 255, 280, 1107
TfiI	GAWTC	7 cut(s)	319, 452, 560, 572, 638, 681, 1130
Tru1I	TTAA	7 cut(s)	906, 1031, 1248, 1781, 1865, 2042, 2059
Tru9I	TTAA	7 cut(s)	906, 1031, 1248, 1781, 1865, 2042, 2059
TscAI	CASTG	4 cut(s)	663, 1282, 1294, 1924
TseFI	GTSAC	3 cut(s)	8, 722, 1241
Tsp45I	GTSAC	3 cut(s)	8, 722, 1241
TspDTI	ATGAA	9 cut(s)	102, 435, 597, 762, 870, 972, 1256, 1568, 1626
TspGWI	ACGGA	3 cut(s)	710, 839, 1102
TspRI	CASTG	4 cut(s)	663, 1282, 1294, 1924
Tth111I	GACNNNGTC	2 cut(s)	290, 976
Van91I	CCANNNNNTGG	1 cut(s)	412
VneI	GTGCAC	1 cut(s)	829
VpaK11BI	GGWCC	2 cut(s)	76, 596
XagI	CCTNNNNNAGG	1 cut(s)	1530
XapI	RAATTY	2 cut(s)	109, 690
XhoI	CTCGAG	1 cut(s)	834
XmiI	GTMKAC	1 cut(s)	731
XmnI	GAANNNNTTC	1 cut(s)	426
XspI	CTAG	7 cut(s)	351, 564, 687, 1317, 1527, 1545, 1899
ZrmI	AGTACT	1 cut(s)	1654
Zsp2I	ATGCAT	1 cut(s)	1813

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.