CLAVATA3 ESR (CLE)-related protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73965 |
| fragaria_vesca | FvH4_5g12751 |
| malus_domestica | MD06G1210600.v1.1 MD14G1221300.v1.1 |
| prunus_persica | Prupe.5G216700_v2.0.a1 |
| pyrus_communis | pycom06g18810 pycom14g18310 |
| rosa_laevigata | RLG00000004969 |
| rosa_roxburghii | Rroxscaffold_3G00269540 |
| rosa_samantha | Rh7CG068400 Rh7DG067900 |
| rosa_wichuraiana | Rw7G005590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 277, 291 |
| AclWI | GGATC | 1 cut(s) | 258 |
| AcoI | YGGCCR | 1 cut(s) | 278 |
| AcsI | RAATTY | 1 cut(s) | 203 |
| AfaI | GTAC | 1 cut(s) | 189 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 287, 314 |
| AgeI | ACCGGT | 1 cut(s) | 341 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 176, 208 |
| AluBI | AGCT | 3 cut(s) | 13, 153, 286 |
| AluI | AGCT | 3 cut(s) | 13, 153, 286 |
| Alw26I | GTCTC | 1 cut(s) | 41 |
| AlwI | GGATC | 1 cut(s) | 258 |
| AoxI | GGCC | 1 cut(s) | 278 |
| ApeKI | GCWGC | 3 cut(s) | 131, 134, 150 |
| ApoI | RAATTY | 1 cut(s) | 203 |
| AsiGI | ACCGGT | 1 cut(s) | 341 |
| AspLEI | GCGC | 1 cut(s) | 330 |
| AspS9I | GGNCC | 1 cut(s) | 344 |
| AsuHPI | GGTGA | 1 cut(s) | 17 |
| AvaII | GGWCC | 1 cut(s) | 344 |
| BbvI | GCAGC | 3 cut(s) | 143, 146, 162 |
| BcoDI | GTCTC | 1 cut(s) | 41 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 277 |
| BisI | GCNGC | 4 cut(s) | 132, 135, 151, 278 |
| BlsI | GCNGC | 4 cut(s) | 133, 136, 152, 279 |
| BmcAI | AGTACT | 1 cut(s) | 189 |
| Bme18I | GGWCC | 1 cut(s) | 344 |
| BmgT120I | GGNCC | 1 cut(s) | 344 |
| BsaJI | CCNNGG | 1 cut(s) | 73 |
| BsaWI | WCCGGW | 3 cut(s) | 180, 228, 341 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 287, 314 |
| Bse118I | RCCGGY | 1 cut(s) | 341 |
| Bse3DI | GCAATG | 1 cut(s) | 353 |
| BseDI | CCNNGG | 1 cut(s) | 73 |
| BseGI | GGATG | 1 cut(s) | 253 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 287, 314 |
| BseMI | GCAATG | 1 cut(s) | 353 |
| BseMII | CTCAG | 1 cut(s) | 160 |
| BseX3I | CGGCCG | 1 cut(s) | 278 |
| BseXI | GCAGC | 3 cut(s) | 143, 146, 162 |
| BseYI | CCCAGC | 1 cut(s) | 286 |
| Bsh1285I | CGRYCG | 2 cut(s) | 160, 281 |
| BshFI | GGCC | 1 cut(s) | 280 |
| BshTI | ACCGGT | 1 cut(s) | 341 |
| BsiEI | CGRYCG | 2 cut(s) | 160, 281 |
| BsiSI | CCGG | 4 cut(s) | 181, 229, 281, 342 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 287, 314 |
| BsmAI | GTCTC | 1 cut(s) | 41 |
| BsnI | GGCC | 1 cut(s) | 280 |
| Bsp143I | GATC | 4 cut(s) | 57, 157, 250, 300 |
| BspACI | CCGC | 2 cut(s) | 277, 291 |
| BspANI | GGCC | 1 cut(s) | 280 |
| BspCNI | CTCAG | 1 cut(s) | 159 |
| BspPI | GGATC | 1 cut(s) | 258 |
| BsrDI | GCAATG | 1 cut(s) | 353 |
| BsrFI | RCCGGY | 1 cut(s) | 341 |
| BssAI | RCCGGY | 1 cut(s) | 341 |
| BssECI | CCNNGG | 1 cut(s) | 73 |
| BssMI | GATC | 4 cut(s) | 57, 157, 250, 300 |
| Bst4CI | ACNGT | 1 cut(s) | 77 |
| BstC8I | GCNNGC | 1 cut(s) | 129 |
| BstDEI | CTNAG | 1 cut(s) | 146 |
| BstDSI | CCRYGG | 1 cut(s) | 73 |
| BstF5I | GGATG | 1 cut(s) | 253 |
| BstHHI | GCGC | 1 cut(s) | 330 |
| BstKTI | GATC | 4 cut(s) | 60, 160, 253, 303 |
| BstMAI | GTCTC | 1 cut(s) | 41 |
| BstMBI | GATC | 4 cut(s) | 57, 157, 250, 300 |
| BstMCI | CGRYCG | 2 cut(s) | 160, 281 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 277, 283 |
| BstV1I | GCAGC | 3 cut(s) | 143, 146, 162 |
| BstZI | CGGCCG | 1 cut(s) | 278 |
| BsuRI | GGCC | 1 cut(s) | 280 |
| BtgI | CCRYGG | 1 cut(s) | 73 |
| BtsCI | GGATG | 1 cut(s) | 253 |
| Cac8I | GCNNGC | 1 cut(s) | 129 |
| CfoI | GCGC | 1 cut(s) | 330 |
| Cfr10I | RCCGGY | 1 cut(s) | 341 |
| Cfr13I | GGNCC | 1 cut(s) | 344 |
| Csp6I | GTAC | 1 cut(s) | 188 |
| CspAI | ACCGGT | 1 cut(s) | 341 |
| CviAII | CATG | 1 cut(s) | 40 |
| CviJI | RGCY | 7 cut(s) | 5, 13, 49, 153, 197, 280, 286 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 13, 49, 153, 197, 280, 286 |
| CviQI | GTAC | 1 cut(s) | 188 |
| DdeI | CTNAG | 1 cut(s) | 146 |
| DpnI | GATC | 4 cut(s) | 59, 159, 252, 302 |
| DpnII | GATC | 4 cut(s) | 57, 157, 250, 300 |
| EaeI | YGGCCR | 1 cut(s) | 278 |
| EagI | CGGCCG | 1 cut(s) | 278 |
| EciI | GGCGGA | 1 cut(s) | 306 |
| EclXI | CGGCCG | 1 cut(s) | 278 |
| Eco47I | GGWCC | 1 cut(s) | 344 |
| Eco52I | CGGCCG | 1 cut(s) | 278 |
| FaeI | CATG | 1 cut(s) | 43 |
| FaiI | YATR | 5 cut(s) | 41, 116, 139, 267, 315 |
| FatI | CATG | 1 cut(s) | 39 |
| Fnu4HI | GCNGC | 4 cut(s) | 132, 135, 151, 278 |
| FokI | GGATG | 1 cut(s) | 240 |
| Fsp4HI | GCNGC | 4 cut(s) | 132, 135, 151, 278 |
| GlaI | GCGC | 1 cut(s) | 329 |
| GluI | GCNGC | 4 cut(s) | 132, 135, 151, 278 |
| GsaI | CCCAGC | 1 cut(s) | 290 |
| HaeIII | GGCC | 1 cut(s) | 280 |
| HapII | CCGG | 4 cut(s) | 181, 229, 281, 342 |
| HhaI | GCGC | 1 cut(s) | 330 |
| Hin1II | CATG | 1 cut(s) | 43 |
| Hin6I | GCGC | 1 cut(s) | 328 |
| HinP1I | GCGC | 1 cut(s) | 328 |
| HindIII | AAGCTT | 1 cut(s) | 11 |
| HpaII | CCGG | 4 cut(s) | 181, 229, 281, 342 |
| HphI | GGTGA | 1 cut(s) | 17 |
| Hpy166II | GTNNAC | 2 cut(s) | 73, 226 |
| Hpy188I | TCNGA | 2 cut(s) | 157, 322 |
| Hpy8I | GTNNAC | 2 cut(s) | 73, 226 |
| Hpy99I | CGWCG | 1 cut(s) | 165 |
| HpyCH4III | ACNGT | 1 cut(s) | 77 |
| HpyCH4IV | ACGT | 1 cut(s) | 241 |
| HpyCH4V | TGCA | 1 cut(s) | 358 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 277, 283 |
| HpyF3I | CTNAG | 1 cut(s) | 146 |
| HpySE526I | ACGT | 1 cut(s) | 241 |
| Hsp92II | CATG | 1 cut(s) | 43 |
| HspAI | GCGC | 1 cut(s) | 328 |
| Kzo9I | GATC | 4 cut(s) | 57, 157, 250, 300 |
| LmnI | GCTCC | 2 cut(s) | 158, 283 |
| LpnPI | CCDG | 6 cut(s) | 194, 242, 272, 285, 294, 355 |
| Lsp1109I | GCAGC | 3 cut(s) | 143, 146, 162 |
| MaeII | ACGT | 1 cut(s) | 241 |
| MaeIII | GTNAC | 2 cut(s) | 107, 164 |
| MalI | GATC | 4 cut(s) | 59, 159, 252, 302 |
| MboI | GATC | 4 cut(s) | 57, 157, 250, 300 |
| MluCI | AATT | 1 cut(s) | 203 |
| MnlI | CCTC | 3 cut(s) | 33, 38, 318 |
| MspI | CCGG | 4 cut(s) | 181, 229, 281, 342 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 277, 283 |
| NdeII | GATC | 4 cut(s) | 57, 157, 250, 300 |
| NlaIII | CATG | 1 cut(s) | 43 |
| PinAI | ACCGGT | 1 cut(s) | 341 |
| PkrI | GCNGC | 4 cut(s) | 133, 136, 152, 279 |
| Ple19I | CGATCG | 1 cut(s) | 160 |
| PspFI | CCCAGC | 1 cut(s) | 286 |
| PspPI | GGNCC | 1 cut(s) | 344 |
| PvuI | CGATCG | 1 cut(s) | 160 |
| RsaI | GTAC | 1 cut(s) | 189 |
| RsaNI | GTAC | 1 cut(s) | 188 |
| SatI | GCNGC | 4 cut(s) | 132, 135, 151, 278 |
| Sau3AI | GATC | 4 cut(s) | 57, 157, 250, 300 |
| Sau96I | GGNCC | 1 cut(s) | 344 |
| ScaI | AGTACT | 1 cut(s) | 189 |
| SetI | ASST | 5 cut(s) | 15, 30, 155, 244, 288 |
| SinI | GGWCC | 1 cut(s) | 344 |
| Sse9I | AATT | 1 cut(s) | 203 |
| SsiI | CCGC | 2 cut(s) | 277, 291 |
| TaaI | ACNGT | 1 cut(s) | 77 |
| TaiI | ACGT | 1 cut(s) | 244 |
| TaqI | TCGA | 1 cut(s) | 303 |
| TasI | AATT | 1 cut(s) | 203 |
| TatI | WGTACW | 1 cut(s) | 187 |
| TauI | GCSGC | 1 cut(s) | 280 |
| TseI | GCWGC | 3 cut(s) | 131, 134, 150 |
| TspDTI | ATGAA | 1 cut(s) | 74 |
| TspGWI | ACGGA | 2 cut(s) | 58, 311 |
| VpaK11BI | GGWCC | 1 cut(s) | 344 |
| XapI | RAATTY | 1 cut(s) | 203 |
| ZrmI | AGTACT | 1 cut(s) | 189 |