No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g15870 |
| malus_domestica | MD01G1075500.v1.1 MD07G1144400.v1.1 |
| prunus_persica | Prupe.2G183300_v2.0.a1 |
| pyrus_communis | pycom07g14310 |
| rosa_chinensis | RchiOBHm_Chr1g0358691 |
| rosa_laevigata | RLG00000027935 |
| rosa_multiflora | Rmu_sc0001609.1_g000031 |
| rosa_roxburghii | Rroxscaffold_4G00297700 |
| rosa_rugosa | Rorug01G0264200 Rorug01G0264300 |
| rosa_samantha | Rh1AG278700 Rh1BG245400 Rh1CG262300 Rh1DG273700 |
| rosa_wichuraiana | Rw1G024740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 84 |
| AcsI | RAATTY | 1 cut(s) | 209 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 154 |
| AluBI | AGCT | 1 cut(s) | 30 |
| AluI | AGCT | 1 cut(s) | 30 |
| AoxI | GGCC | 1 cut(s) | 144 |
| ApeKI | GCWGC | 2 cut(s) | 30, 69 |
| ApoI | RAATTY | 1 cut(s) | 209 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 209 |
| AspS9I | GGNCC | 1 cut(s) | 145 |
| BbvI | GCAGC | 2 cut(s) | 17, 81 |
| BfmI | CTRYAG | 1 cut(s) | 31 |
| BfuAI | ACCTGC | 1 cut(s) | 84 |
| BisI | GCNGC | 2 cut(s) | 31, 70 |
| BlpI | GCTNAGC | 1 cut(s) | 65 |
| BlsI | GCNGC | 2 cut(s) | 32, 71 |
| BmgT120I | GGNCC | 1 cut(s) | 145 |
| BmiI | GGNNCC | 1 cut(s) | 147 |
| BmrI | ACTGGG | 1 cut(s) | 90 |
| BmuI | ACTGGG | 1 cut(s) | 90 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 65 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 154 |
| Bse1I | ACTGG | 1 cut(s) | 85 |
| Bse3DI | GCAATG | 1 cut(s) | 135 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BseMI | GCAATG | 1 cut(s) | 135 |
| BseMII | CTCAG | 1 cut(s) | 79 |
| BseNI | ACTGG | 1 cut(s) | 85 |
| BseRI | GAGGAG | 1 cut(s) | 170 |
| BseXI | GCAGC | 2 cut(s) | 17, 81 |
| BshFI | GGCC | 1 cut(s) | 146 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BsnI | GGCC | 1 cut(s) | 146 |
| Bsp143I | GATC | 1 cut(s) | 184 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 65 |
| BspANI | GGCC | 1 cut(s) | 146 |
| BspCNI | CTCAG | 1 cut(s) | 78 |
| BspLI | GGNNCC | 1 cut(s) | 147 |
| BspMAI | CTGCAG | 1 cut(s) | 35 |
| BspMI | ACCTGC | 1 cut(s) | 84 |
| BsrDI | GCAATG | 1 cut(s) | 135 |
| BsrI | ACTGG | 1 cut(s) | 85 |
| BssMI | GATC | 1 cut(s) | 184 |
| Bst4CI | ACNGT | 1 cut(s) | 131 |
| BstDEI | CTNAG | 1 cut(s) | 65 |
| BstKTI | GATC | 1 cut(s) | 187 |
| BstMBI | GATC | 1 cut(s) | 184 |
| BstSFI | CTRYAG | 1 cut(s) | 31 |
| BstV1I | GCAGC | 2 cut(s) | 17, 81 |
| BsuRI | GGCC | 1 cut(s) | 146 |
| BveI | ACCTGC | 1 cut(s) | 84 |
| Cfr13I | GGNCC | 1 cut(s) | 145 |
| CviAII | CATG | 3 cut(s) | 46, 56, 214 |
| CviJI | RGCY | 3 cut(s) | 30, 64, 146 |
| CviKI_1 | RGCY | 3 cut(s) | 30, 64, 146 |
| DdeI | CTNAG | 1 cut(s) | 65 |
| DpnI | GATC | 1 cut(s) | 186 |
| DpnII | GATC | 1 cut(s) | 184 |
| EcoO109I | RGGNCCY | 1 cut(s) | 145 |
| FaeI | CATG | 3 cut(s) | 49, 59, 217 |
| FaiI | YATR | 5 cut(s) | 47, 57, 215, 247, 251 |
| FatI | CATG | 3 cut(s) | 45, 55, 213 |
| Fnu4HI | GCNGC | 2 cut(s) | 31, 70 |
| Fsp4HI | GCNGC | 2 cut(s) | 31, 70 |
| GluI | GCNGC | 2 cut(s) | 31, 70 |
| HaeIII | GGCC | 1 cut(s) | 146 |
| Hin1II | CATG | 3 cut(s) | 49, 59, 217 |
| Hpy188I | TCNGA | 1 cut(s) | 115 |
| HpyCH4III | ACNGT | 1 cut(s) | 131 |
| HpyCH4V | TGCA | 3 cut(s) | 33, 140, 176 |
| HpyF3I | CTNAG | 1 cut(s) | 65 |
| Hsp92II | CATG | 3 cut(s) | 49, 59, 217 |
| Kzo9I | GATC | 1 cut(s) | 184 |
| LmnI | GCTCC | 1 cut(s) | 9 |
| LpnPI | CCDG | 3 cut(s) | 66, 79, 209 |
| Lsp1109I | GCAGC | 2 cut(s) | 17, 81 |
| MaeIII | GTNAC | 2 cut(s) | 125, 131 |
| MalI | GATC | 1 cut(s) | 186 |
| MboI | GATC | 1 cut(s) | 184 |
| MboII | GAAGA | 1 cut(s) | 205 |
| MluCI | AATT | 2 cut(s) | 177, 209 |
| MnlI | CCTC | 3 cut(s) | 136, 148, 153 |
| MroXI | GAANNNNTTC | 1 cut(s) | 209 |
| MseI | TTAA | 2 cut(s) | 180, 230 |
| NdeII | GATC | 1 cut(s) | 184 |
| NlaIII | CATG | 3 cut(s) | 49, 59, 217 |
| NlaIV | GGNNCC | 1 cut(s) | 147 |
| NmuCI | GTSAC | 1 cut(s) | 131 |
| PdmI | GAANNNNTTC | 1 cut(s) | 209 |
| PkrI | GCNGC | 2 cut(s) | 32, 71 |
| PspN4I | GGNNCC | 1 cut(s) | 147 |
| PspPI | GGNCC | 1 cut(s) | 145 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 94, 126 |
| PstI | CTGCAG | 1 cut(s) | 35 |
| SaqAI | TTAA | 2 cut(s) | 180, 230 |
| SatI | GCNGC | 2 cut(s) | 31, 70 |
| Sau3AI | GATC | 1 cut(s) | 184 |
| Sau96I | GGNCC | 1 cut(s) | 145 |
| SetI | ASST | 3 cut(s) | 32, 98, 228 |
| SfcI | CTRYAG | 1 cut(s) | 31 |
| SgeI | CNNG | 8 cut(s) | 58, 68, 93, 106, 200, 226, 236, 248 |
| Sse9I | AATT | 2 cut(s) | 177, 209 |
| TaaI | ACNGT | 1 cut(s) | 131 |
| TasI | AATT | 2 cut(s) | 177, 209 |
| Tru1I | TTAA | 2 cut(s) | 180, 230 |
| Tru9I | TTAA | 2 cut(s) | 180, 230 |
| TseFI | GTSAC | 1 cut(s) | 131 |
| TseI | GCWGC | 2 cut(s) | 30, 69 |
| Tsp45I | GTSAC | 1 cut(s) | 131 |
| TspDTI | ATGAA | 2 cut(s) | 44, 202 |
| XapI | RAATTY | 1 cut(s) | 209 |
| XmnI | GAANNNNTTC | 1 cut(s) | 209 |