Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0008481

Physical Location & Seq

Genomic Coordinates Forward (+)

18764166 .. 18777041

Gene Structure 12876 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3015 bp

ATGTTGTTGAGGAGGTTGTGGATGAAGTTGTGCATAATTATCACAGTGGCTTCAATAAAGCAATTCAAAATTATTCTCAGCTTGCGGTTGTTCAGCGAATCTACTCAAAGTGTTGGGGTCCTGAAGGTTGATTTGGCTGAAGCAAAGAAGCGTCTCAGTGCCCGTAGTAAACAGCTGCATCAGTTATGGTACCGGTCAGTTACTTTGCGTCACATAATCTCCCTCTTAGATCAAATTGAGGGCATATCTAAGGTTCCAGCTCGGATAGAGAAGCTGATTGCTGAAAAGCAGTATTATGCTGCTGTTCAATTTCATGTTCAATCAATGTTGATGCTTGAAAGAGAGGGGCTTCAAACGGTCGGTGCCCTTCAAGATGTTCGCTCTGAGTTGACAAAGTTGCGAGGAGTTCTGTTTTATAAAGTGCTAGAGGATTTACATGCTCATCTTTACAACAAGGGTGAATATAGCTCAGCTGCTTTAAGTTTGCAAGAAATGGATGATGAGGTACCAACCACCACAGCTACTGTATTTTCACTGAGTAATTCACAATCCCTGTCTCGAAGAACCAGGCTGTTAAAAGGTGACAATCAGTTCGGTAATCAAGGAGATGGATCGTATAGGACAGGTTCTGTTGATGGCAGTTCATCTTTTGATGGCGTTGATGAGGAGGGCACTTTGGAACTGCATGATGAAGCTACCTCAGATGGGCATACTTCAGTGAGGATCAATGGTGATGTCAAAATTGTTCCTCATGAGATGCCAACATGGCTTCAGTATTCCACTCCGGATGAATTTCTTGAAGCAATAAAGAAAAGTGATGCTCCACTTCATATCAAATATTTGCAGACCATGGTTGAGTGCCTTTGCATGCTAAGAAAAGTTGCAGCTGCTGGTGCTATAATATGCCAAAGATTGCGACCTACAATTCATGAGATCATCACATCCAAGATTAAAGCTCATGCCGAGCTTCTTAATTCCTCAAGGTCTGGGATTGGGCAAGCTTCACGAACTGCTACAACTGGCCTACATTTTATGAAGGGACAGTTACAAAGTTATCAGTTGCCAAAACAGAAACGTCAGAATGGGATATCACTGTCTGGAACTCTATTGGCAGTAAGCCCTGTCTCACCTGTGATGGCTCCTGCAGGGACAGCACAAGCCGCAGCAAAAGAACTTCTTGATTCAGTTTTGGATGCTGTTGTTCGGATATTTGAGAACCATGTTGTTGTTGGGGAGCTTTTGGAATCAAAGTCCTCTGTTGACACGAACACGCCAAAATCAATGCCAACAGATGTAAATCGGAATACTGATTTAGAAGCATCTCAAGTTACTGGAGGCTATAGCATTGGTTTTTCCTTGACAGTATTACAGAGTGAATGCCAACAACTTATTTGTGAGATTCTGCGGGCAACTCCTGAAGCCGCATCTGCTGATGCTGCTGTACAAACAGCTAGACTTGCAAACAAGGTCCCTTCCAAAGACAAGAGGGATGGTGCAGAAGAGGGTCTGACCTTTGCTTTTCGCTTCACAGATGCTACTATTTCTATGCCCAACCAAGCGATCATTCGTCAAGGCTGGAGTAGGAAAGGTCCAAACGTTTCACAAGAAGGTTATGGGTCTGCAGCTATCTTGCCTGTGCAAGGCATATATCTTGCAGCATCTGTATACCGGCCTGTTATTCAGTTTACAGATAAGGTTGCATCAATGCTTCCTAAAAAGTATTCCCAGTTAGGTAATGATGGATTGATGGTTTTTGTGGAGAACTTTGTGAAGGACCATTTTCTTCCCACGATGTTTGTGGACTACAGAAAAGGCGTACAGCAAGCTATATCAAGTCCAGCTGCATTCCGGCCCAGAGCACATGCTGCTGCATCTTATACACCTTCAATTGAGAAGGGTCGACCTGTCTTACAGGGACTGTTGGCAATAGATTTTTTAGCAAAAGAGGTGCTTGGTTGGGCACAAGCTATGCCTAAATTTGCCGTTGACCTTGTGAAGTATGTGCAAACTTTCCTTGAGCGAACCTATGAACGATGCCGGACGGCATACATGGAGGCAGTTCTGGAGAAACAGAGCTATATGCTTATTGGAAGACATGATATTGAGCAGTTGATGCATCTTGATCCAGCAAGTACATGTTTACCAAATTCCTTTGGTCAGTCAAACTTCGAAACCCATGCTTCGGATTCTGAAAGTCTTGAGGTTGAATTACAATTAAGCGACTTATTATTGAATTTGCGGCCTATTAAGCAGGATAATCTAATTCGTGATGATAACAAACTAATATTGCTGGCTTCCCTTAGTGATTCATTGGAGTATGTTGCAGAGTCTATTGAAAGGCTTGGGCAGACAACCTTCAGATCTCCAAATCAAGTAGAAGAGAGTGGTAAGAACCATCATCAACGAACAACTAGTGATGCTTCTAGGGATCTGGCATCATTTGCAGATGAGTATAGAAAATTGGCGATTGACTGCCTCAAGGTTTTACATGTTGAGATGCAATTGGAGACGATTTTCCATATGCAGGAAATGACAAATAGGGAATACATGGAAGACCAAGATGCAGAAGAACCAGATGACTTCATTGTTTCACTTACTGCACAGATAACACGCAGGGATGAGGAAATGGCACCTTTCATTGCAGGAACGAAGCAAAGCTATATATTTGGTGGGATTTGTAGCATCGCTGCAAATGCATCCATCAAGGCTTTGGCTGATATGAAATCAATCAATCTTTTCGGCGTTCAGCAGATATGTCGGAATACAATTGCGCTGGAACAGGCCCTGGCCGCTATCCCATCAATTAACAGTGAAAGTGTACAACAACGACTAGATCATGTCCGAACTTACTATGAACTCCTAAACATGCCATTCGAGGCCTTGCTAGCTTTCATCACAGAGCACGAGCACTTGTTTACGACTACAGAGTATGCAAATCTTCTAAAGGTCCAGGTTCCAGGAAGGGAGATTCCTGCCGATGCTCTAGATCGTGCATCACAGATTTTATACCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0003006 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0005938 GO:0006605 GO:0006612 GO:0006810 GO:0006886 GO:0006887 GO:0006892 GO:0006893 GO:0006903 GO:0007154 GO:0007275 GO:0008037 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009506 GO:0009791 GO:0009856 GO:0009875 GO:0009987 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0022414 GO:0030054 GO:0031982 GO:0032501 GO:0032502 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043230 GO:0044237 GO:0044249 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0045184 GO:0046903 GO:0046907 GO:0048193 GO:0048316 GO:0048354 GO:0048359 GO:0048544 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051704 GO:0055044 GO:0060321 GO:0061458 GO:0070062 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:0072657 GO:0090150 GO:0098876 GO:0099023 GO:0099568 GO:1903561

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec8_exocyst

Protein Analysis

1005

Amino Acids

111.76

Weight (kDa)

5.98

Isoelectric Point (pI)

46.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec8_N	PF04048	18 - 92	1.2e-14	Exocyst complex component Sec8 N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10380 AT3G10380
fragaria_vesca	FvH4_7g18760 FvH4_7g18760
malus_domestica	MD01G1103100.v1.1 MD07G1169800.v1.1
prunus_persica	Prupe.2G208700_v2.0.a1 Prupe.2G208700_v2.0.a1
pyrus_communis	pycom01g12960 pycom07g16370
rosa_chinensis	RchiOBHm_Chr1g0362571
rosa_laevigata	RLG00000027638
rosa_multiflora	Rmu_sc0005725.1_g000007
rosa_roxburghii	Rroxscaffold_4G00293960
rosa_rugosa	Rorug01G0299600 Rorug01G0299600 Rorug01G0299600 Rorug01G0299700
rosa_samantha	Rh1AG308300 Rh1BG271600 Rh1CG289200 Rh1DG301900
rosa_wichuraiana	Rw1G027370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	417
Acc65I	GGTACC	2 cut(s)	189, 505
AccB1I	GGYRCC	4 cut(s)	189, 362, 505, 2629
AccI	GTMKAC	2 cut(s)	1665, 1900
AccIII	TCCGGA	1 cut(s)	784
AciI	CCGC	6 cut(s)	85, 1161, 1405, 1422, 2239, 2790
AclI	AACGTT	1 cut(s)	1596
AclWI	GGATC	4 cut(s)	619, 731, 2117, 2436
AcoI	YGGCCR	1 cut(s)	2787
AcsI	RAATTY	4 cut(s)	791, 1976, 2146, 2233
AcuI	CTGAAG	6 cut(s)	143, 159, 699, 755, 1437, 2341
AfaI	GTAC	6 cut(s)	191, 507, 1443, 1818, 2134, 2820
AfiI	CCNNNNNNNGG	4 cut(s)	705, 1640, 2182, 2524
AflIII	ACRYGT	2 cut(s)	2135, 2488
AgeI	ACCGGT	1 cut(s)	192
AhlI	ACTAGT	1 cut(s)	2411
AjnI	CCWGG	4 cut(s)	566, 2784, 2949, 2956
AjuI	GAANNNNNNNTTGG	4 cut(s)	116, 148, 1548, 1580
Alw21I	GWGCWC	3 cut(s)	1861, 2904, 2910
Alw26I	GTCTC	4 cut(s)	158, 561, 1129, 2501
AlwI	GGATC	4 cut(s)	619, 731, 2117, 2436
AlwNI	CAGNNNCTG	6 cut(s)	524, 629, 890, 1661, 1918, 2785
Aor13HI	TCCGGA	1 cut(s)	784
AoxI	GGCC	7 cut(s)	1021, 1670, 1850, 2240, 2781, 2787, 2877
ApoI	RAATTY	4 cut(s)	791, 1976, 2146, 2233
ArsI	GACNNNNNNTTYG	2 cut(s)	575, 607
AsiGI	ACCGGT	1 cut(s)	192
Asp718I	GGTACC	2 cut(s)	189, 505
AspLEI	GCGC	1 cut(s)	2773
AspS9I	GGNCC	7 cut(s)	118, 1468, 1589, 1774, 1851, 2782, 2947
AsuHPI	GGTGA	4 cut(s)	470, 593, 743, 1119
AsuII	TTCGAA	1 cut(s)	2169
AsuNHI	GCTAGC	1 cut(s)	2884
AvaII	GGWCC	5 cut(s)	118, 1468, 1589, 1774, 2947
BaeGI	GKGCMC	4 cut(s)	163, 367, 674, 1963
BanI	GGYRCC	4 cut(s)	189, 362, 505, 2629
BauI	CACGAG	1 cut(s)	2903
BbsI	GAAGAC	2 cut(s)	2098, 2559
Bbv12I	GWGCWC	3 cut(s)	1861, 2904, 2910
BceAI	ACGGC	2 cut(s)	1967, 2058
BcgI	CGANNNNNNTGC	4 cut(s)	2159, 2193, 2738, 2772
BciT130I	CCWGG	4 cut(s)	568, 2786, 2951, 2958
BcoDI	GTCTC	4 cut(s)	158, 561, 1129, 2501
BcuI	ACTAGT	1 cut(s)	2411
BfaI	CTAG	7 cut(s)	425, 1452, 2412, 2424, 2831, 2885, 2984
BfmI	CTRYAG	5 cut(s)	1143, 1339, 1620, 1804, 2922
BglI	GCCNNNNNGGC	1 cut(s)	766
BglII	AGATCT	1 cut(s)	2360
BlpI	GCTNAGC	1 cut(s)	469
Bme1390I	CCNGG	4 cut(s)	568, 2786, 2951, 2958
Bme18I	GGWCC	5 cut(s)	118, 1468, 1589, 1774, 2947
BmgT120I	GGNCC	7 cut(s)	118, 1468, 1589, 1774, 1851, 2782, 2947
BmiI	GGNNCC	9 cut(s)	119, 191, 255, 364, 507, 1140, 1470, 2631, 2955
BmrFI	CCNGG	4 cut(s)	568, 2786, 2951, 2958
BmrI	ACTGGG	1 cut(s)	1720
BmtI	GCTAGC	1 cut(s)	2888
BmuI	ACTGGG	1 cut(s)	1720
BpiI	GAAGAC	2 cut(s)	2098, 2559
BpmI	CTGGAG	3 cut(s)	1353, 1597, 2084
Bpu1102I	GCTNAGC	1 cut(s)	469
Bpu14I	TTCGAA	1 cut(s)	2169
BpuEI	CTTGAG	5 cut(s)	964, 1308, 2036, 2219, 2462
BsaBI	GATNNNNATC	1 cut(s)	1296
BsaJI	CCNNGG	2 cut(s)	849, 2784
BsaWI	WCCGGW	2 cut(s)	192, 784
BsaXI	ACNNNNNCTCC	2 cut(s)	203, 233
Bsc4I	CCNNNNNNNGG	4 cut(s)	705, 1640, 2182, 2524
Bse118I	RCCGGY	2 cut(s)	192, 1668
Bse1I	ACTGG	3 cut(s)	1024, 1336, 1726
Bse3DI	GCAATG	1 cut(s)	2637
Bse8I	GATNNNNATC	1 cut(s)	1296
BseAI	TCCGGA	1 cut(s)	784
BseBI	CCWGG	4 cut(s)	568, 2786, 2951, 2958
BseDI	CCNNGG	2 cut(s)	849, 2784
BseGI	GGATG	8 cut(s)	27, 502, 793, 941, 1198, 1495, 2623, 2696
BseJI	GATNNNNATC	1 cut(s)	1296
BseLI	CCNNNNNNNGG	4 cut(s)	705, 1640, 2182, 2524
BseMI	GCAATG	1 cut(s)	2637
BseMII	CTCAG	6 cut(s)	91, 169, 375, 483, 527, 714
BseNI	ACTGG	3 cut(s)	1024, 1336, 1726
BseRI	GAGGAG	3 cut(s)	25, 417, 680
BseSI	GKGCMC	4 cut(s)	163, 367, 674, 1963
BsgI	GTGCAG	2 cut(s)	1515, 2583
Bsh1285I	CGRYCG	1 cut(s)	360
BshFI	GGCC	7 cut(s)	1023, 1672, 1852, 2242, 2783, 2789, 2879
BshNI	GGYRCC	4 cut(s)	189, 362, 505, 2629
BshTI	ACCGGT	1 cut(s)	192
BsiEI	CGRYCG	1 cut(s)	360
BsiHKAI	GWGCWC	3 cut(s)	1861, 2904, 2910
BsiSI	CCGG	5 cut(s)	193, 785, 1669, 1849, 2038
BslFI	GGGAC	4 cut(s)	1053, 1162, 1454, 1929
BslI	CCNNNNNNNGG	4 cut(s)	705, 1640, 2182, 2524
BsmAI	GTCTC	4 cut(s)	158, 561, 1129, 2501
BsmBI	CGTCTC	2 cut(s)	158, 2501
BsmFI	GGGAC	4 cut(s)	1053, 1162, 1454, 1929
BsmI	GAATGC	2 cut(s)	1382, 1844
BsnI	GGCC	7 cut(s)	1023, 1672, 1852, 2242, 2783, 2789, 2879
Bsp119I	TTCGAA	1 cut(s)	2169
Bsp1286I	GDGCHC	7 cut(s)	163, 367, 674, 1861, 1963, 2904, 2910
Bsp13I	TCCGGA	1 cut(s)	784
Bsp1407I	TGTACA	2 cut(s)	1441, 2818
Bsp1720I	GCTNAGC	1 cut(s)	469
Bsp19I	CCATGG	1 cut(s)	849
BspACI	CCGC	6 cut(s)	85, 1161, 1405, 1422, 2239, 2790
BspANI	GGCC	7 cut(s)	1023, 1672, 1852, 2242, 2783, 2789, 2879
BspCNI	CTCAG	6 cut(s)	90, 168, 376, 482, 528, 713
BspEI	TCCGGA	1 cut(s)	784
BspHI	TCATGA	2 cut(s)	751, 928
BspLI	GGNNCC	9 cut(s)	119, 191, 255, 364, 507, 1140, 1470, 2631, 2955
BspMAI	CTGCAG	2 cut(s)	1147, 1624
BspOI	GCTAGC	1 cut(s)	2888
BspPI	GGATC	4 cut(s)	619, 731, 2117, 2436
BspT104I	TTCGAA	1 cut(s)	2169
BspT107I	GGYRCC	4 cut(s)	189, 362, 505, 2629
BsrDI	GCAATG	1 cut(s)	2637
BsrFI	RCCGGY	2 cut(s)	192, 1668
BsrGI	TGTACA	2 cut(s)	1441, 2818
BsrI	ACTGG	3 cut(s)	1024, 1336, 1726
BssAI	RCCGGY	2 cut(s)	192, 1668
BssECI	CCNNGG	2 cut(s)	849, 2784
BssNAI	GTATAC	1 cut(s)	1666
BssSI	CACGAG	1 cut(s)	2903
BssT1I	CCWWGG	1 cut(s)	849
Bst1107I	GTATAC	1 cut(s)	1666
Bst2BI	CACGAG	1 cut(s)	2903
Bst2UI	CCWGG	4 cut(s)	568, 2786, 2951, 2958
Bst4CI	ACNGT	9 cut(s)	46, 358, 526, 1044, 1095, 1363, 1920, 2810, 3011
Bst6I	CTCTTC	2 cut(s)	1494, 2373
BstAPI	GCANNNNNTGC	3 cut(s)	1865, 2113, 2441
BstAUI	TGTACA	2 cut(s)	1441, 2818
BstBI	TTCGAA	1 cut(s)	2169
BstC8I	GCNNGC	7 cut(s)	83, 869, 999, 1407, 1824, 2292, 2886
BstDSI	CCRYGG	1 cut(s)	849
BstENI	CCTNNNNNAGG	1 cut(s)	1638
BstF5I	GGATG	8 cut(s)	27, 502, 793, 941, 1198, 1495, 2623, 2696
BstHHI	GCGC	1 cut(s)	2773
BstMAI	GTCTC	4 cut(s)	158, 561, 1129, 2501
BstMCI	CGRYCG	1 cut(s)	360
BstNI	CCWGG	4 cut(s)	568, 2786, 2951, 2958
BstNSI	RCATGY	6 cut(s)	440, 871, 1865, 2139, 2492, 2869
BstSCI	CCNGG	4 cut(s)	566, 2784, 2949, 2956
BstSFI	CTRYAG	5 cut(s)	1143, 1339, 1620, 1804, 2922
BstSLI	GKGCMC	4 cut(s)	163, 367, 674, 1963
BstV2I	GAAGAC	2 cut(s)	2098, 2559
BstX2I	RGATCY	2 cut(s)	2360, 2428
BstYI	RGATCY	2 cut(s)	2360, 2428
BstZ17I	GTATAC	1 cut(s)	1666
BsuRI	GGCC	7 cut(s)	1023, 1672, 1852, 2242, 2783, 2789, 2879
BtgI	CCRYGG	1 cut(s)	849
BtgZI	GCGATG	1 cut(s)	2668
BtsCI	GGATG	8 cut(s)	27, 502, 793, 941, 1198, 1495, 2623, 2696
BtsIMutI	CAGTG	6 cut(s)	51, 163, 533, 723, 1091, 2815
Cac8I	GCNNGC	7 cut(s)	83, 869, 999, 1407, 1824, 2292, 2886
CaiI	CAGNNNCTG	6 cut(s)	524, 629, 890, 1661, 1918, 2785
CciI	TCATGA	2 cut(s)	751, 928
CfoI	GCGC	1 cut(s)	2773
Cfr10I	RCCGGY	2 cut(s)	192, 1668
Cfr13I	GGNCC	7 cut(s)	118, 1468, 1589, 1774, 1851, 2782, 2947
CseI	GACGC	2 cut(s)	140, 197
Csp6I	GTAC	6 cut(s)	190, 506, 1442, 1817, 2133, 2819
CspAI	ACCGGT	1 cut(s)	192
CspCI	CAANNNNNGTGG	2 cut(s)	1777, 1812
CviQI	GTAC	6 cut(s)	190, 506, 1442, 1817, 2133, 2819
EaeI	YGGCCR	1 cut(s)	2787
Eam1104I	CTCTTC	2 cut(s)	1494, 2373
EarI	CTCTTC	2 cut(s)	1494, 2373
Eco130I	CCWWGG	1 cut(s)	849
Eco147I	AGGCCT	1 cut(s)	2879
Eco32I	GATATC	1 cut(s)	1089
Eco47I	GGWCC	5 cut(s)	118, 1468, 1589, 1774, 2947
Eco57I	CTGAAG	6 cut(s)	143, 159, 699, 755, 1437, 2341
EcoNI	CCTNNNNNAGG	1 cut(s)	1638
EcoO109I	RGGNCCY	3 cut(s)	118, 1468, 2782
EcoRII	CCWGG	4 cut(s)	566, 2784, 2949, 2956
EcoRV	GATATC	1 cut(s)	1089
EcoT14I	CCWWGG	1 cut(s)	849
EcoT22I	ATGCAT	2 cut(s)	2118, 2698
ErhI	CCWWGG	1 cut(s)	849
Esp3I	CGTCTC	2 cut(s)	158, 2501
FalI	AAGNNNNNCTT	4 cut(s)	1161, 1193, 1935, 1967
FaqI	GGGAC	4 cut(s)	1053, 1162, 1454, 1929
FauI	CCCGC	1 cut(s)	1398
FauNDI	CATATG	1 cut(s)	2520
FblI	GTMKAC	2 cut(s)	1665, 1900
FokI	GGATG	8 cut(s)	34, 509, 800, 928, 1205, 1502, 2630, 2683
FspBI	CTAG	7 cut(s)	425, 1452, 2412, 2424, 2831, 2885, 2984
GlaI	GCGC	1 cut(s)	2772
GsuI	CTGGAG	3 cut(s)	1353, 1597, 2084
HaeIII	GGCC	7 cut(s)	1023, 1672, 1852, 2242, 2783, 2789, 2879
HapII	CCGG	5 cut(s)	193, 785, 1669, 1849, 2038
HgaI	GACGC	2 cut(s)	140, 197
HhaI	GCGC	1 cut(s)	2773
Hin6I	GCGC	1 cut(s)	2771
HinP1I	GCGC	1 cut(s)	2771
HincII	GTYRAC	4 cut(s)	390, 1261, 1901, 1987
HindII	GTYRAC	4 cut(s)	390, 1261, 1901, 1987
HindIII	AAGCTT	1 cut(s)	999
HinfI	GANTC	8 cut(s)	98, 1181, 1244, 1399, 2186, 2306, 2327, 2968
HpaII	CCGG	5 cut(s)	193, 785, 1669, 1849, 2038
HphI	GGTGA	4 cut(s)	470, 593, 743, 1119
HpyCH4III	ACNGT	9 cut(s)	46, 358, 526, 1044, 1095, 1363, 1920, 2810, 3011
HpyCH4IV	ACGT	2 cut(s)	1075, 1596
HpySE526I	ACGT	2 cut(s)	1075, 1596
HspAI	GCGC	1 cut(s)	2771
Kpn2I	TCCGGA	1 cut(s)	784
KpnI	GGTACC	2 cut(s)	193, 509
LmnI	GCTCC	3 cut(s)	826, 1144, 1234
MaeI	CTAG	7 cut(s)	425, 1452, 2412, 2424, 2831, 2885, 2984
MaeII	ACGT	2 cut(s)	1075, 1596
MaeIII	GTNAC	5 cut(s)	199, 209, 581, 1044, 1327
MboII	GAAGA	8 cut(s)	573, 1511, 1775, 2103, 2390, 2564, 2579, 2930
MfeI	CAATTG	3 cut(s)	1887, 2501, 2766
MflI	RGATCY	2 cut(s)	2360, 2428
MhlI	GDGCHC	7 cut(s)	163, 367, 674, 1861, 1963, 2904, 2910
MlyI	GAGTC	1 cut(s)	2336
MmeI	TCCRAC	1 cut(s)	2738
Mph1103I	ATGCAT	2 cut(s)	2118, 2698
MroI	TCCGGA	1 cut(s)	784
MseI	TTAA	7 cut(s)	479, 575, 951, 972, 2216, 2247, 2805
MspA1I	CMGCKG	4 cut(s)	175, 473, 887, 1841
MspI	CCGG	5 cut(s)	193, 785, 1669, 1849, 2038
MspR9I	CCNGG	4 cut(s)	568, 2786, 2951, 2958
MunI	CAATTG	3 cut(s)	1887, 2501, 2766
Mva1269I	GAATGC	2 cut(s)	1382, 1844
MvaI	CCWGG	4 cut(s)	568, 2786, 2951, 2958
NcoI	CCATGG	1 cut(s)	849
NdeI	CATATG	1 cut(s)	2520
NheI	GCTAGC	1 cut(s)	2884
NlaIV	GGNNCC	9 cut(s)	119, 191, 255, 364, 507, 1140, 1470, 2631, 2955
NmeAIII	GCCGAG	1 cut(s)	988
NmuCI	GTSAC	2 cut(s)	209, 581
NsiI	ATGCAT	2 cut(s)	2118, 2698
NspI	RCATGY	6 cut(s)	440, 871, 1865, 2139, 2492, 2869
NspV	TTCGAA	1 cut(s)	2169
PaeI	GCATGC	1 cut(s)	871
PagI	TCATGA	2 cut(s)	751, 928
PceI	AGGCCT	1 cut(s)	2879
PciI	ACATGT	2 cut(s)	2135, 2488
PctI	GAATGC	2 cut(s)	1382, 1844
PfeI	GAWTC	7 cut(s)	98, 1181, 1244, 1399, 2186, 2306, 2968
PfoI	TCCNGGA	1 cut(s)	2956
PinAI	ACCGGT	1 cut(s)	192
PleI	GAGTC	1 cut(s)	2335
PpsI	GAGTC	1 cut(s)	2335
PpuMI	RGGWCCY	2 cut(s)	118, 1468
PscI	ACATGT	2 cut(s)	2135, 2488
PsiI	TTATAA	1 cut(s)	417
Psp1406I	AACGTT	1 cut(s)	1596
Psp5II	RGGWCCY	2 cut(s)	118, 1468
Psp6I	CCWGG	4 cut(s)	566, 2784, 2949, 2956
PspGI	CCWGG	4 cut(s)	566, 2784, 2949, 2956
PspN4I	GGNNCC	9 cut(s)	119, 191, 255, 364, 507, 1140, 1470, 2631, 2955
PspPI	GGNCC	7 cut(s)	118, 1468, 1589, 1774, 1851, 2782, 2947
PspPPI	RGGWCCY	2 cut(s)	118, 1468
PstI	CTGCAG	2 cut(s)	1147, 1624
PstNI	CAGNNNCTG	6 cut(s)	524, 629, 890, 1661, 1918, 2785
PsuI	RGATCY	2 cut(s)	2360, 2428
PvuII	CAGCTG	4 cut(s)	175, 473, 887, 1841
RsaI	GTAC	6 cut(s)	191, 507, 1443, 1818, 2134, 2820
RsaNI	GTAC	6 cut(s)	190, 506, 1442, 1817, 2133, 2819
SalI	GTCGAC	1 cut(s)	1899
SaqAI	TTAA	7 cut(s)	479, 575, 951, 972, 2216, 2247, 2805
Sau96I	GGNCC	7 cut(s)	118, 1468, 1589, 1774, 1851, 2782, 2947
SbfI	CCTGCAGG	1 cut(s)	1147
SchI	GAGTC	1 cut(s)	2336
ScrFI	CCNGG	4 cut(s)	568, 2786, 2951, 2958
SdaI	CCTGCAGG	1 cut(s)	1147
SduI	GDGCHC	7 cut(s)	163, 367, 674, 1861, 1963, 2904, 2910
SfcI	CTRYAG	5 cut(s)	1143, 1339, 1620, 1804, 2922
SfuI	TTCGAA	1 cut(s)	2169
SinI	GGWCC	5 cut(s)	118, 1468, 1589, 1774, 2947
SmlI	CTYRAG	5 cut(s)	979, 1323, 2015, 2198, 2477
SmoI	CTYRAG	5 cut(s)	979, 1323, 2015, 2198, 2477
SpeI	ACTAGT	1 cut(s)	2411
SphI	GCATGC	1 cut(s)	871
Sse8387I	CCTGCAGG	1 cut(s)	1147
SseBI	AGGCCT	1 cut(s)	2879
SsiI	CCGC	6 cut(s)	85, 1161, 1405, 1422, 2239, 2790
SspI	AATATT	2 cut(s)	839, 2286
SspMI	CTAG	7 cut(s)	425, 1452, 2412, 2424, 2831, 2885, 2984
StuI	AGGCCT	1 cut(s)	2879
StyD4I	CCNGG	4 cut(s)	566, 2784, 2949, 2956
StyI	CCWWGG	1 cut(s)	849
TaaI	ACNGT	9 cut(s)	46, 358, 526, 1044, 1095, 1363, 1920, 2810, 3011
TaiI	ACGT	2 cut(s)	1078, 1599
TaqI	TCGA	4 cut(s)	559, 1900, 2169, 2874
TatI	WGTACW	3 cut(s)	1441, 2132, 2818
TauI	GCSGC	4 cut(s)	1163, 1424, 2242, 2792
TfiI	GAWTC	7 cut(s)	98, 1181, 1244, 1399, 2186, 2306, 2968
Tru1I	TTAA	7 cut(s)	479, 575, 951, 972, 2216, 2247, 2805
Tru9I	TTAA	7 cut(s)	479, 575, 951, 972, 2216, 2247, 2805
TscAI	CASTG	6 cut(s)	51, 163, 540, 723, 1098, 2815
TseFI	GTSAC	2 cut(s)	209, 581
Tsp45I	GTSAC	2 cut(s)	209, 581
TspRI	CASTG	6 cut(s)	51, 163, 540, 723, 1098, 2815
VpaK11BI	GGWCC	5 cut(s)	118, 1468, 1589, 1774, 2947
XagI	CCTNNNNNAGG	1 cut(s)	1638
XapI	RAATTY	4 cut(s)	791, 1976, 2146, 2233
XbaI	TCTAGA	1 cut(s)	2983
XceI	RCATGY	6 cut(s)	440, 871, 1865, 2139, 2492, 2869
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1226, 1795, 2707
XmiI	GTMKAC	2 cut(s)	1665, 1900
XspI	CTAG	7 cut(s)	425, 1452, 2412, 2424, 2831, 2885, 2984
Zsp2I	ATGCAT	2 cut(s)	2118, 2698

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.