pycom08g05970
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
4533543 .. 4539916
6374 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g05970.2

Sequence Viewer

Length: 2898 bp
ATGAGGTTTGATGGGAGGGCAGTTATGGCATTTCGGGTGGAGTTTGTGCTTCTGGTTCTTCTTCTTGGGTGTGTGAGCTTCGGTTATGGGGACTCACGGAACGATCAAGGAAGAACACTGCTGGGAATAAAGAAGGCATTTAGGGATGTGGACAATGTTCTCTATGAATGGACGGATTCACCCTCTTTAGATTACTGTGTTTGGAGAGGCGTCACATGTGATAACTCTCTCAATGTCATTGCACTTAATCTATCAGGTTTGAATCTTGGAGGGGAAATCTCATCTGTGATAGGAGATCTCGAAAGCCTGCAGTCTATGGGAAACCGCCTTTCCGGCCAGATCCCGGATGAGATTGGTGCCTGTGCAGCACTGCAAAACTTGGACTTGTCCTTCAATGAGATATTTGGAGACATACCATTTTCGATATCCAAGTTGAAACAGCTTGAAAATCTAGACCTAGCACAGAATAATCTCAGTGGGGAGATACCAAGGCTTATTTACTGGAATGAAGTTCTACAGTATCTTGGCTTGCGAGGGAACAATTTAGTTGGAACACTTTCTCCAGATATGTGCCAGTTAACTGGGTTATGGTATTTTGATGTGAGAAATAACAGCTTGACTGGTAGCATTCCTCAAAACATAGGGAACTGCACTGCCTTCCAGGTTTTGGATCTATCCTACAACCAGCTAACTGGAGGGATTCCGTTTAATATCGCGTTTTTGCAAGTTGCCACCTTGTCATTACAAGGTAATCAACTTTCTGGGCCTATCCCATCCGTGATTGGCCTGATGCAGGCTCTCGCCGTATTGGATTTGAGCAGCAACGCTTTAAGTGGACCAATCCCTCCTATCCTAGGGAATTTGACTTATACAGAGAAACTGTATTTGCATGCTAACAAGCTTAATGGATCAATCCCCCCAGAGCTTGGACAGATGACAAAGCTTCATTATTTGGAGTTGAATGATAACCATCTTACAGGACATATTCCACCGGAACTTGGGAAGCTGACTGATTTGTATGACCTGAACGTTGCAAACAACTATCTTCAAGGACCTATCCCTGATAATCTCAGCTCGTGTACAAATCTCAACAGCCTCAATGTGCATGGGAACAAGTTGAGTGGAACCATCCCGACTGCTCTTCAGAGGCTGGAGAGTATGACTTACTTAAATCTGTCCTCCAACTATCTTCGTGGTCCAATTCCTATCGAGCTGTCTTTTATTGGTAACTTGGATACCTTGGATATTTCAAATAACAAACTAAGTGGAACCATTCCTTCATCACTTGGGGATTTGGAACATCTTCTAAAGCTGAATTTGAGTCGAAACCATTTGACGGGATTTATTCCAGGGGAGTTTGGTAATTTAAGGAGTGTTATGGAAATAGACCTTTCAAATAATCAGCTCACAGGATTAATTCCTCAAGAGCTCAGTCAGCTACAGAACATGAATTTATTGAGATTAGAGCACAACAATATATCCGGGGATGTGGTATCGCTGATAAACTGCTTCAGCCTTTCTGCACTAAATGTATCTTACAACAACCTGGCAGGTGACGTTCCCACAAGCAAGAACTTCTCAAGGTTTTCACCAGACAGTTTTATTGGAAATCCTGATCTTTGTGGCCCTTGGCTCAATTCTCGATGTCATGAGTCTCGTCCAACAGAGCGAGCCACACTATCTAAACCTGCTATCCTGGGAATCGCTCTTGGGGCCCTTGTGATTCTTCTCATGATTCTTATTGCTGTATGCCGGCCATATAATCCAACTCCTTTTTCTGATGGTTCATTTGACAAACCCGTTAAGTACTCAAATCCGAAGCTGGTGATCCTTCACATGAATTTGGCACTTCATGTGTACGAGGACATCATGAGGATGACTGAAAACTTGAGCGAGAAGTATATAATTGGTTACGGTTCATCAAGTACAGTGTACAAATGTGTTCTGAAAAATTGTAAGCCAGTGGCCATCAAGAAACTCTACTCCCAGTATCATCGGTGCATCAAGGAATTTGAGACAGAACTTGCGACAGTAGGAAGCATCAAGCATCGGAATCTGGTGAGCCTCCAGGGGTACTCCTTGTCCTCCTCCGGAAACCTTCTCTTTTACGACTACATGGAAAATGGCAGTCTCTGGGATCACCTTCATGGCCCTTTCAAGAAGAAGAAGCTCGACTGGACAACTCGTCTCCAGATTGCCCTTGGAGCAGCCCAAGGGCTTGCCTATCTGCATCATGATTGCAGCCCCAGAATCATACACCGGGATATCAAGTCGTCCAATATTCTATTGGACAAGGATTTCGAAGCTCATCTAAATGATTTCGGCATTGCCAAGAACTTATGCCACTCAAAGACCCATACGTCTACTTACTTAATGGGCACGATTGGCTACATAGACCCTGAGTATGCGCGAACTTCCCGCCTCACTGAGAAGTCCGATGTGTATAGTTACGGAATTGTTCTGCTGGAGTTGCTGACAGGAAGGAAAGCCGTAGACAATGAATCCAATCTCCATCATTTGATATTATCTAAGACGGAGAGCAATGCTGTCATGGAAACCGTAGACCCAGAGATCTTGCCAACATGCACAGACCTCGGACAAGTGAAGAAGGTCTTCCAGCTTGCCCTTCTGTGCACAAAGCGGCAGCCAACAGACCGGCCAACAATGCACGAAGTAACTCGCGTGTTGGCCAGTCTCATGCCTTCCCCCGCACCACCAAAACAACCAACCCCTGCCAACCCGCCATCGTCACAGCTCCCGATCACCAAAGTGCCGTGCTACGTGGACGAGTACGCGAATGTGAAAACGCCCCACCTGCTAAATTGTCCATCAATGAGCACCTCAGATGCCCAGCTGTTTCTCAAGTTTGGAGAGGTAATTTCTCAGAACAGTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001558 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004888 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006833 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009653 GO:0009664 GO:0009791 GO:0009798 GO:0009888 GO:0009943 GO:0009944 GO:0009955 GO:0009965 GO:0009987 GO:0010016 GO:0010087 GO:0010103 GO:0010148 GO:0010229 GO:0010286 GO:0010374 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022414 GO:0022603 GO:0023052 GO:0030155 GO:0032501 GO:0032502 GO:0033218 GO:0033554 GO:0033612 GO:0034605 GO:0036211 GO:0038023 GO:0040008 GO:0042044 GO:0042277 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0048281 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0061458 GO:0065001 GO:0065007 GO:0070370 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0090558 GO:0090567 GO:0090626 GO:0090698 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:1905421 GO:2000026
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

966

Amino Acids

106.5

Weight (kDa)

5.99

Isoelectric Point (pI)

36.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016560)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1541, 2823
AasI GACNNNNNNGTC 1 cut(s) 2359
Acc36I ACCTGC 3 cut(s) 1541, 1696, 2823
AccB1I GGYRCC 1 cut(s) 356
AccB7I CCANNNNNTGG 2 cut(s) 667, 926
AccI GTMKAC 3 cut(s) 2363, 2493, 2562
AccII CGCG 4 cut(s) 716, 2410, 2682, 2795
AccIII TCCGGA 1 cut(s) 2090
AciI CCGC 5 cut(s) 325, 2419, 2641, 2709, 2741
AclI AACGTT 1 cut(s) 1029
AclWI GGATC 5 cut(s) 334, 678, 916, 1822, 2145
AcoI YGGCCR 5 cut(s) 334, 1754, 1965, 2657, 2688
AcsI RAATTY 5 cut(s) 859, 1315, 1450, 1840, 2009
AcuI CTGAAG 2 cut(s) 1127, 1495
AcyI GRCGYC 1 cut(s) 210
AfaI GTAC 7 cut(s) 1081, 1808, 1859, 1927, 1934, 2075, 2792
AfiI CCNNNNNNNGG 7 cut(s) 343, 667, 793, 854, 926, 998, 1336
AflIII ACRYGT 1 cut(s) 215
AgsI TTSAA 9 cut(s) 262, 394, 436, 446, 961, 1049, 1251, 1395, 2158
AhdI GACNNNNNGTC 1 cut(s) 2184
AjnI CCWGG 5 cut(s) 660, 1348, 1545, 1695, 2067
AjuI GAANNNNNNNTTGG 2 cut(s) 1759, 1791
AleI CACNNNNGTG 1 cut(s) 2768
AloI GAACNNNNNNTCC 2 cut(s) 544, 576
Alw21I GWGCWC 4 cut(s) 1431, 1470, 2636, 2840
Alw26I GTCTC 6 cut(s) 402, 1659, 2009, 2135, 2192, 2699
Alw44I GTGCAC 1 cut(s) 2632
AlwI GGATC 5 cut(s) 334, 678, 916, 1822, 2145
AlwNI CAGNNNCTG 2 cut(s) 1150, 2133
Aor13HI TCCGGA 1 cut(s) 2090
ApaI GGGCCC 1 cut(s) 1717
ApaLI GTGCAC 1 cut(s) 2632
ApeKI GCWGC 5 cut(s) 365, 819, 2207, 2241, 2644
ApoI RAATTY 5 cut(s) 859, 1315, 1450, 1840, 2009
ArsI GACNNNNNNTTYG 2 cut(s) 2282, 2314
AseI ATTAAT 1 cut(s) 1415
Asp700I GAANNNNTTC 3 cut(s) 556, 1302, 2612
AspA2I CCTAGG 1 cut(s) 853
AspLEI GCGC 1 cut(s) 2410
AspS9I GGNCC 8 cut(s) 764, 836, 1052, 1196, 1625, 1713, 1714, 2150
AsuC2I CCSGG 3 cut(s) 344, 1483, 2261
AsuHPI GGTGA 7 cut(s) 171, 1565, 1581, 1837, 2071, 2132, 2755
AsuII TTCGAA 1 cut(s) 2301
AvaII GGWCC 3 cut(s) 836, 1052, 1196
AvrII CCTAGG 1 cut(s) 853
BaeGI GKGCMC 3 cut(s) 1717, 2381, 2636
BalI TGGCCA 2 cut(s) 1967, 2690
BanI GGYRCC 1 cut(s) 356
BanII GRGCYC 2 cut(s) 1431, 1717
BauI CACGAG 1 cut(s) 1075
BbsI GAAGAC 1 cut(s) 2605
Bbv12I GWGCWC 4 cut(s) 1431, 1470, 2636, 2840
BbvI GCAGC 5 cut(s) 377, 831, 2219, 2253, 2656
BccI CCATC 9 cut(s) 5, 781, 978, 1136, 1775, 1976, 2520, 2752, 2836
BceAI ACGGC 3 cut(s) 788, 2474, 2758
BcgI CGANNNNNNTGC 2 cut(s) 2575, 2609
BciT130I CCWGG 5 cut(s) 662, 1350, 1547, 1697, 2069
BciVI GTATCC 1 cut(s) 1228
BcnI CCSGG 3 cut(s) 344, 1483, 2261
BcoDI GTCTC 6 cut(s) 402, 1659, 2009, 2135, 2192, 2699
BfaI CTAG 3 cut(s) 452, 458, 854
BfmI CTRYAG 3 cut(s) 308, 515, 1439
BfuAI ACCTGC 3 cut(s) 1541, 1696, 2823
BfuI GTATCC 1 cut(s) 1228
BglI GCCNNNNNGGC 1 cut(s) 333
BglII AGATCT 2 cut(s) 295, 2571
BisI GCNGC 6 cut(s) 366, 820, 2208, 2242, 2642, 2645
BlnI CCTAGG 1 cut(s) 853
BlsI GCNGC 6 cut(s) 367, 821, 2209, 2243, 2643, 2646
BmcAI AGTACT 1 cut(s) 1808
Bme1390I CCNGG 8 cut(s) 344, 662, 1350, 1483, 1547, 1697, 2069, 2261
Bme18I GGWCC 3 cut(s) 836, 1052, 1196
BmeRI GACNNNNNGTC 1 cut(s) 2184
BmgT120I GGNCC 8 cut(s) 764, 836, 1052, 1196, 1625, 1713, 1714, 2150
BmiI GGNNCC 5 cut(s) 358, 1126, 1270, 1714, 1715
BmrFI CCNGG 8 cut(s) 344, 662, 1350, 1483, 1547, 1697, 2069, 2261
BmrI ACTGGG 2 cut(s) 591, 1981
BmsI GCATC 6 cut(s) 780, 2010, 2049, 2056, 2239, 2836
BmuI ACTGGG 2 cut(s) 591, 1981
BpiI GAAGAC 1 cut(s) 2605
BpmI CTGGAG 6 cut(s) 546, 714, 1172, 2051, 2174, 2486
Bpu14I TTCGAA 1 cut(s) 2301
BpuEI CTTGAG 4 cut(s) 1407, 1564, 1909, 2846
BpuMI CCSGG 3 cut(s) 344, 1483, 2261
BsaAI YACGTR 1 cut(s) 2782
BsaBI GATNNNNATC 1 cut(s) 969
BsaHI GRCGYC 1 cut(s) 210
BsaWI WCCGGW 2 cut(s) 991, 2090
BsaXI ACNNNNNCTCC 2 cut(s) 544, 574
Bsc4I CCNNNNNNNGG 7 cut(s) 343, 667, 793, 854, 926, 998, 1336
Bse118I RCCGGY 2 cut(s) 1752, 2655
Bse1I ACTGG 9 cut(s) 506, 574, 586, 625, 697, 1961, 1987, 2180, 2691
Bse3DI GCAATG 3 cut(s) 237, 2325, 2548
Bse8I GATNNNNATC 1 cut(s) 969
BseAI TCCGGA 1 cut(s) 2090
BseBI CCWGG 5 cut(s) 662, 1350, 1547, 1697, 2069
BseGI GGATG 6 cut(s) 151, 352, 773, 1128, 1492, 1881
BseJI GATNNNNATC 1 cut(s) 969
BseLI CCNNNNNNNGG 7 cut(s) 343, 667, 793, 854, 926, 998, 1336
BseMI GCAATG 3 cut(s) 237, 2325, 2548
BseMII CTCAG 7 cut(s) 487, 1084, 1444, 2391, 2418, 2856, 2897
BseNI ACTGG 9 cut(s) 506, 574, 586, 625, 697, 1961, 1987, 2180, 2691
BseRI GAGGAG 1 cut(s) 2077
BseSI GKGCMC 3 cut(s) 1717, 2381, 2636
BseXI GCAGC 5 cut(s) 377, 831, 2219, 2253, 2656
BseYI CCCAGC 2 cut(s) 121, 2850
BsgI GTGCAG 3 cut(s) 384, 634, 1506
Bsh1236I CGCG 4 cut(s) 716, 2410, 2682, 2795
BshNI GGYRCC 1 cut(s) 356
BsiHKAI GWGCWC 4 cut(s) 1431, 1470, 2636, 2840
BsiSI CCGG 8 cut(s) 333, 344, 992, 1482, 1753, 2091, 2260, 2656
BslFI GGGAC 1 cut(s) 104
BslI CCNNNNNNNGG 7 cut(s) 343, 667, 793, 854, 926, 998, 1336
BsmAI GTCTC 6 cut(s) 402, 1659, 2009, 2135, 2192, 2699
BsmBI CGTCTC 1 cut(s) 2192
BsmFI GGGAC 1 cut(s) 104
BsmI GAATGC 1 cut(s) 627
Bsp119I TTCGAA 1 cut(s) 2301
Bsp120I GGGCCC 1 cut(s) 1713
Bsp1286I GDGCHC 6 cut(s) 1431, 1470, 1717, 2381, 2636, 2840
Bsp13I TCCGGA 1 cut(s) 2090
Bsp1407I TGTACA 2 cut(s) 1079, 1932
BspACI CCGC 5 cut(s) 325, 2419, 2641, 2709, 2741
BspCNI CTCAG 7 cut(s) 486, 1083, 1443, 2392, 2419, 2855, 2896
BspEI TCCGGA 1 cut(s) 2090
BspFNI CGCG 4 cut(s) 716, 2410, 2682, 2795
BspHI TCATGA 4 cut(s) 1648, 1731, 1869, 2233
BspLI GGNNCC 5 cut(s) 358, 1126, 1270, 1714, 1715
BspMAI CTGCAG 1 cut(s) 312
BspMI ACCTGC 3 cut(s) 1541, 1696, 2823
BspPI GGATC 5 cut(s) 334, 678, 916, 1822, 2145
BspQI GCTCTTC 1 cut(s) 1146
BspT104I TTCGAA 1 cut(s) 2301
BspT107I GGYRCC 1 cut(s) 356
BsrDI GCAATG 3 cut(s) 237, 2325, 2548
BsrFI RCCGGY 2 cut(s) 1752, 2655
BsrGI TGTACA 2 cut(s) 1079, 1932
BsrI ACTGG 9 cut(s) 506, 574, 586, 625, 697, 1961, 1987, 2180, 2691
BssAI RCCGGY 2 cut(s) 1752, 2655
BssNI GRCGYC 1 cut(s) 210
BssSI CACGAG 1 cut(s) 1075
BssT1I CCWWGG 6 cut(s) 488, 853, 1239, 1628, 2200, 2212
Bst2BI CACGAG 1 cut(s) 1075
Bst2UI CCWGG 5 cut(s) 662, 1350, 1547, 1697, 2069
Bst4CI ACNGT 9 cut(s) 197, 519, 882, 1598, 1916, 1930, 2032, 2560, 2891
Bst6I CTCTTC 1 cut(s) 1146
BstACI GRCGYC 1 cut(s) 210
BstAUI TGTACA 2 cut(s) 1079, 1932
BstBAI YACGTR 1 cut(s) 2782
BstBI TTCGAA 1 cut(s) 2301
BstC8I GCNNGC 8 cut(s) 308, 530, 795, 891, 1671, 1754, 2220, 2622
BstDEI CTNAG 9 cut(s) 473, 1070, 1262, 1430, 2400, 2427, 2529, 2842, 2883
BstENI CCTNNNNNAGG 2 cut(s) 791, 852
BstF5I GGATG 6 cut(s) 151, 352, 773, 1128, 1492, 1881
BstFNI CGCG 4 cut(s) 716, 2410, 2682, 2795
BstHHI GCGC 1 cut(s) 2410
BstMAI GTCTC 6 cut(s) 402, 1659, 2009, 2135, 2192, 2699
BstNI CCWGG 5 cut(s) 662, 1350, 1547, 1697, 2069
BstNSI RCATGY 3 cut(s) 219, 893, 2586
BstSCI CCNGG 8 cut(s) 342, 660, 1348, 1481, 1545, 1695, 2067, 2259
BstSFI CTRYAG 3 cut(s) 308, 515, 1439
BstSLI GKGCMC 3 cut(s) 1717, 2381, 2636
BstUI CGCG 4 cut(s) 716, 2410, 2682, 2795
BstV1I GCAGC 5 cut(s) 377, 831, 2219, 2253, 2656
BstV2I GAAGAC 1 cut(s) 2605
BstX2I RGATCY 4 cut(s) 295, 339, 670, 2571
BstXI CCANNNNNNTGG 2 cut(s) 581, 692
BstYI RGATCY 4 cut(s) 295, 339, 670, 2571
BsuI GTATCC 1 cut(s) 1228
BtsCI GGATG 6 cut(s) 151, 352, 773, 1128, 1492, 1881
BtsI GCAGTG 3 cut(s) 116, 368, 651
BtsIMutI CAGTG 8 cut(s) 116, 368, 481, 651, 1935, 1968, 2424, 2896
BveI ACCTGC 3 cut(s) 1541, 1696, 2823
Cac8I GCNNGC 8 cut(s) 308, 530, 795, 891, 1671, 1754, 2220, 2622
CaiI CAGNNNCTG 2 cut(s) 1150, 2133
CciI TCATGA 4 cut(s) 1648, 1731, 1869, 2233
CfoI GCGC 1 cut(s) 2410
Cfr10I RCCGGY 2 cut(s) 1752, 2655
Cfr13I GGNCC 8 cut(s) 764, 836, 1052, 1196, 1625, 1713, 1714, 2150
CseI GACGC 1 cut(s) 199
Csp6I GTAC 7 cut(s) 1080, 1807, 1858, 1926, 1933, 2074, 2791
CspCI CAANNNNNGTGG 4 cut(s) 1102, 1137, 1246, 1281
CviQI GTAC 7 cut(s) 1080, 1807, 1858, 1926, 1933, 2074, 2791
DdeI CTNAG 9 cut(s) 473, 1070, 1262, 1430, 2400, 2427, 2529, 2842, 2883
DrdI GACNNNNNNGTC 1 cut(s) 2359
DriI GACNNNNNGTC 1 cut(s) 2184
DseDI GACNNNNNNGTC 1 cut(s) 2359
EaeI YGGCCR 5 cut(s) 334, 1754, 1965, 2657, 2688
Eam1104I CTCTTC 1 cut(s) 1146
Eam1105I GACNNNNNGTC 1 cut(s) 2184
EarI CTCTTC 1 cut(s) 1146
Ecl136II GAGCTC 1 cut(s) 1429
Eco130I CCWWGG 6 cut(s) 488, 853, 1239, 1628, 2200, 2212
Eco24I GRGCYC 2 cut(s) 1431, 1717
Eco32I GATATC 2 cut(s) 426, 2266
Eco47I GGWCC 3 cut(s) 836, 1052, 1196
Eco53kI GAGCTC 1 cut(s) 1429
Eco57I CTGAAG 2 cut(s) 1127, 1495
EcoICRI GAGCTC 1 cut(s) 1429
EcoNI CCTNNNNNAGG 2 cut(s) 791, 852
EcoO109I RGGNCCY 3 cut(s) 1052, 1713, 1714
EcoRII CCWGG 5 cut(s) 660, 1348, 1545, 1695, 2067
EcoRV GATATC 2 cut(s) 426, 2266
EcoT14I CCWWGG 6 cut(s) 488, 853, 1239, 1628, 2200, 2212
EcoT38I GRGCYC 2 cut(s) 1431, 1717
ErhI CCWWGG 6 cut(s) 488, 853, 1239, 1628, 2200, 2212
Esp3I CGTCTC 1 cut(s) 2192
FalI AAGNNNNNCTT 2 cut(s) 2597, 2629
FaqI GGGAC 1 cut(s) 104
FauI CCCGC 3 cut(s) 2426, 2716, 2748
FblI GTMKAC 3 cut(s) 2363, 2493, 2562
Fnu4HI GCNGC 6 cut(s) 366, 820, 2208, 2242, 2642, 2645
FokI GGATG 6 cut(s) 158, 359, 760, 1115, 1499, 1888
FriOI GRGCYC 2 cut(s) 1431, 1717
Fsp4HI GCNGC 6 cut(s) 366, 820, 2208, 2242, 2642, 2645
FspBI CTAG 3 cut(s) 452, 458, 854
GlaI GCGC 1 cut(s) 2409
GluI GCNGC 6 cut(s) 366, 820, 2208, 2242, 2642, 2645
GsaI CCCAGC 2 cut(s) 125, 2854
GsuI CTGGAG 6 cut(s) 546, 714, 1172, 2051, 2174, 2486
HapII CCGG 8 cut(s) 333, 344, 992, 1482, 1753, 2091, 2260, 2656
HgaI GACGC 1 cut(s) 199
HhaI GCGC 1 cut(s) 2410
Hin1I GRCGYC 1 cut(s) 210
Hin6I GCGC 1 cut(s) 2408
HinP1I GCGC 1 cut(s) 2408
HincII GTYRAC 1 cut(s) 579
HindII GTYRAC 1 cut(s) 579
HindIII AAGCTT 2 cut(s) 899, 941
HpaI GTTAAC 1 cut(s) 579
HpaII CCGG 8 cut(s) 333, 344, 992, 1482, 1753, 2091, 2260, 2656
HphI GGTGA 7 cut(s) 171, 1565, 1581, 1837, 2071, 2132, 2755
Hpy188I TCNGA 9 cut(s) 1146, 1780, 1818, 1947, 2052, 2437, 2597, 2845, 2886
HpyCH4III ACNGT 9 cut(s) 197, 519, 882, 1598, 1916, 1930, 2032, 2560, 2891
HpyCH4IV ACGT 4 cut(s) 1029, 1557, 2360, 2781
HpyF3I CTNAG 9 cut(s) 473, 1070, 1262, 1430, 2400, 2427, 2529, 2842, 2883
HpySE526I ACGT 4 cut(s) 1029, 1557, 2360, 2781
Hsp92I GRCGYC 1 cut(s) 210
HspAI GCGC 1 cut(s) 2408
Kpn2I TCCGGA 1 cut(s) 2090
KroI GCCGGC 1 cut(s) 1752
KroNI GCCGGC 1 cut(s) 1754
KspAI GTTAAC 1 cut(s) 579
LguI GCTCTTC 1 cut(s) 1146
LmnI GCTCC 2 cut(s) 2204, 2760
Lsp1109I GCAGC 5 cut(s) 377, 831, 2219, 2253, 2656
LweI GCATC 6 cut(s) 780, 2010, 2049, 2056, 2239, 2836
MaeI CTAG 3 cut(s) 452, 458, 854
MaeII ACGT 4 cut(s) 1029, 1557, 2360, 2781
MaeIII GTNAC 7 cut(s) 211, 1226, 1553, 1910, 2447, 2674, 2748
MflI RGATCY 4 cut(s) 295, 339, 670, 2571
MhlI GDGCHC 6 cut(s) 1431, 1470, 1717, 2381, 2636, 2840
MlsI TGGCCA 2 cut(s) 1967, 2690
MluNI TGGCCA 2 cut(s) 1967, 2690
MlyI GAGTC 3 cut(s) 86, 1330, 1661
MmeI TCCRAC 4 cut(s) 529, 1206, 1685, 1790
Mox20I TGGCCA 2 cut(s) 1967, 2690
MroI TCCGGA 1 cut(s) 2090
MroNI GCCGGC 1 cut(s) 1752
MroXI GAANNNNTTC 3 cut(s) 556, 1302, 2612
MscI TGGCCA 2 cut(s) 1967, 2690
MslI CAYNNNNRTG 4 cut(s) 1874, 2145, 2313, 2768
Msp20I TGGCCA 2 cut(s) 1967, 2690
MspA1I CMGCKG 1 cut(s) 2854
MspI CCGG 8 cut(s) 333, 344, 992, 1482, 1753, 2091, 2260, 2656
MspR9I CCNGG 8 cut(s) 344, 662, 1350, 1483, 1547, 1697, 2069, 2261
Mva1269I GAATGC 1 cut(s) 627
MvaI CCWGG 5 cut(s) 662, 1350, 1547, 1697, 2069
MvnI CGCG 4 cut(s) 716, 2410, 2682, 2795
NaeI GCCGGC 1 cut(s) 1754
NciI CCSGG 3 cut(s) 344, 1483, 2261
NgoMIV GCCGGC 1 cut(s) 1752
NlaIV GGNNCC 5 cut(s) 358, 1126, 1270, 1714, 1715
NmuCI GTSAC 3 cut(s) 211, 1553, 2748
NspI RCATGY 3 cut(s) 219, 893, 2586
NspV TTCGAA 1 cut(s) 2301
OliI CACNNNNGTG 1 cut(s) 2768
PaeI GCATGC 1 cut(s) 893
PagI TCATGA 4 cut(s) 1648, 1731, 1869, 2233
PaqCI CACCTGC 2 cut(s) 1541, 2823
PciI ACATGT 1 cut(s) 215
PciSI GCTCTTC 1 cut(s) 1146
PctI GAATGC 1 cut(s) 627
PdiI GCCGGC 1 cut(s) 1754
PdmI GAANNNNTTC 3 cut(s) 556, 1302, 2612
PfeI GAWTC 9 cut(s) 176, 262, 700, 1701, 1723, 1735, 2053, 2250, 2501
PflMI CCANNNNNTGG 2 cut(s) 667, 926
PfoI TCCNGGA 1 cut(s) 342
PkrI GCNGC 6 cut(s) 367, 821, 2209, 2243, 2643, 2646
PleI GAGTC 3 cut(s) 86, 1329, 1660
PpsI GAGTC 3 cut(s) 86, 1329, 1660
Ppu21I YACGTR 1 cut(s) 2782
PpuMI RGGWCCY 1 cut(s) 1052
PscI ACATGT 1 cut(s) 215
PshBI ATTAAT 1 cut(s) 1415
Psp124BI GAGCTC 1 cut(s) 1431
Psp1406I AACGTT 1 cut(s) 1029
Psp5II RGGWCCY 1 cut(s) 1052
Psp6I CCWGG 5 cut(s) 660, 1348, 1545, 1695, 2067
PspFI CCCAGC 2 cut(s) 121, 2850
PspGI CCWGG 5 cut(s) 660, 1348, 1545, 1695, 2067
PspN4I GGNNCC 5 cut(s) 358, 1126, 1270, 1714, 1715
PspOMI GGGCCC 1 cut(s) 1713
PspPI GGNCC 8 cut(s) 764, 836, 1052, 1196, 1625, 1713, 1714, 2150
PspPPI RGGWCCY 1 cut(s) 1052
PstI CTGCAG 1 cut(s) 312
PstNI CAGNNNCTG 2 cut(s) 1150, 2133
PsuI RGATCY 4 cut(s) 295, 339, 670, 2571
PvuII CAGCTG 1 cut(s) 2854
RsaI GTAC 7 cut(s) 1081, 1808, 1859, 1927, 1934, 2075, 2792
RsaNI GTAC 7 cut(s) 1080, 1807, 1858, 1926, 1933, 2074, 2791
RseI CAYNNNNRTG 4 cut(s) 1874, 2145, 2313, 2768
SacI GAGCTC 1 cut(s) 1431
SapI GCTCTTC 1 cut(s) 1146
SatI GCNGC 6 cut(s) 366, 820, 2208, 2242, 2642, 2645
Sau96I GGNCC 8 cut(s) 764, 836, 1052, 1196, 1625, 1713, 1714, 2150
ScaI AGTACT 1 cut(s) 1808
SchI GAGTC 3 cut(s) 86, 1330, 1661
ScrFI CCNGG 8 cut(s) 344, 662, 1350, 1483, 1547, 1697, 2069, 2261
SduI GDGCHC 6 cut(s) 1431, 1470, 1717, 2381, 2636, 2840
SfaNI GCATC 6 cut(s) 780, 2010, 2049, 2056, 2239, 2836
SfcI CTRYAG 3 cut(s) 308, 515, 1439
SfuI TTCGAA 1 cut(s) 2301
SinI GGWCC 3 cut(s) 836, 1052, 1196
SmiMI CAYNNNNRTG 4 cut(s) 1874, 2145, 2313, 2768
SmlI CTYRAG 4 cut(s) 1422, 1579, 1888, 2861
SmoI CTYRAG 4 cut(s) 1422, 1579, 1888, 2861
SphI GCATGC 1 cut(s) 893
SsiI CCGC 5 cut(s) 325, 2419, 2641, 2709, 2741
SspI AATATT 1 cut(s) 2281
SspMI CTAG 3 cut(s) 452, 458, 854
SstI GAGCTC 1 cut(s) 1431
StyD4I CCNGG 8 cut(s) 342, 660, 1348, 1481, 1545, 1695, 2067, 2259
StyI CCWWGG 6 cut(s) 488, 853, 1239, 1628, 2200, 2212
TaaI ACNGT 9 cut(s) 197, 519, 882, 1598, 1916, 1930, 2032, 2560, 2891
TaiI ACGT 4 cut(s) 1032, 1560, 2363, 2784
TaqI TCGA 7 cut(s) 300, 422, 1209, 1324, 1642, 2172, 2301
TatI WGTACW 4 cut(s) 1079, 1806, 1925, 1932
TauI GCSGC 1 cut(s) 2644
TfiI GAWTC 9 cut(s) 176, 262, 700, 1701, 1723, 1735, 2053, 2250, 2501
TscAI CASTG 8 cut(s) 123, 375, 481, 658, 1935, 1968, 2431, 2896
TseFI GTSAC 3 cut(s) 211, 1553, 2748
TseI GCWGC 5 cut(s) 365, 819, 2207, 2241, 2644
Tsp45I GTSAC 3 cut(s) 211, 1553, 2748
TspGWI ACGGA 6 cut(s) 112, 188, 693, 766, 2466, 2549
TspRI CASTG 8 cut(s) 123, 375, 481, 658, 1935, 1968, 2431, 2896
Van91I CCANNNNNTGG 2 cut(s) 667, 926
VneI GTGCAC 1 cut(s) 2632
VpaK11BI GGWCC 3 cut(s) 836, 1052, 1196
VspI ATTAAT 1 cut(s) 1415
XagI CCTNNNNNAGG 2 cut(s) 791, 852
XapI RAATTY 5 cut(s) 859, 1315, 1450, 1840, 2009
XbaI TCTAGA 1 cut(s) 451
XceI RCATGY 3 cut(s) 219, 893, 2586
XcmI CCANNNNNNNNNTGG 2 cut(s) 2198, 2284
XmaJI CCTAGG 1 cut(s) 853
XmiI GTMKAC 3 cut(s) 2363, 2493, 2562
XmnI GAANNNNTTC 3 cut(s) 556, 1302, 2612
XspI CTAG 3 cut(s) 452, 458, 854
ZrmI AGTACT 1 cut(s) 1808
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.