pycom08g12450

ADP binding

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
10885220 .. 10885964
745 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g12450.1

Sequence Viewer

Length: 471 bp
ATGTTGGTCCAATCGGTTCATACTAACGGGCCATGTTGGATCCGAGTGGCACCAACCCGTTATCCTTCCACTGCCAAGAGCGGGAGGTGGTCGTTGCTCTGTGAAGCCACCTTCGCCCAAACTCCACGGCACAACTCCTGGCTTGGAATAGAAATTGTCCAATTCGAATCTCTTACCATTCGAATCCCTTACTCGCTAAAAAAGCAAAAAACAAAAAATAAAAAGATAAGAACCATAAAAAAAAGTCGAATCCCTTACTCGCTAAAAAAGCAAAAAACAAAAAATAAAAAGATAAGAACCATAAAAAAAAGGTTAAAAAAATGTTGGTCCAATCGGTTCATACTAACAGGCCATGTTGGATCCGAGTGGCACCAACCCGTTATCCTTCCACTGCCAAGAGCGGGAGGTGGTTGTTGCTCTGTGAAGCCAGCCTTCCGCGGTGTCCTCCGCTCTAGGAACCGTGAAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

157

Amino Acids

17.96

Weight (kDa)

11.25

Isoelectric Point (pI)

47.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019790)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 49, 369
AccBSI CCGCTC 3 cut(s) 81, 401, 450
AccII CGCG 1 cut(s) 438
AciI CCGC 5 cut(s) 81, 401, 436, 438, 448
AclWI GGATC 4 cut(s) 34, 47, 354, 367
AfiI CCNNNNNNNGG 2 cut(s) 81, 401
AjnI CCWGG 1 cut(s) 137
AlwI GGATC 4 cut(s) 34, 47, 354, 367
AoxI GGCC 2 cut(s) 29, 349
AspS9I GGNCC 3 cut(s) 7, 29, 327
AsuII TTCGAA 2 cut(s) 165, 181
AvaII GGWCC 2 cut(s) 7, 327
BamHI GGATCC 2 cut(s) 39, 359
BanI GGYRCC 2 cut(s) 49, 369
BceAI ACGGC 1 cut(s) 143
BciT130I CCWGG 1 cut(s) 139
BfaI CTAG 1 cut(s) 453
Bme1390I CCNGG 1 cut(s) 139
Bme18I GGWCC 2 cut(s) 7, 327
BmgT120I GGNCC 3 cut(s) 7, 29, 327
BmiI GGNNCC 5 cut(s) 41, 51, 361, 371, 458
BmrFI CCNGG 1 cut(s) 139
Bpu14I TTCGAA 2 cut(s) 165, 181
BsaJI CCNNGG 2 cut(s) 125, 436
Bsc4I CCNNNNNNNGG 2 cut(s) 81, 401
BseBI CCWGG 1 cut(s) 139
BseDI CCNNGG 2 cut(s) 125, 436
BseLI CCNNNNNNNGG 2 cut(s) 81, 401
Bsh1236I CGCG 1 cut(s) 438
BshFI GGCC 2 cut(s) 31, 351
BshNI GGYRCC 2 cut(s) 49, 369
BslI CCNNNNNNNGG 2 cut(s) 81, 401
BsnI GGCC 2 cut(s) 31, 351
Bsp119I TTCGAA 2 cut(s) 165, 181
Bsp143I GATC 2 cut(s) 39, 359
BspACI CCGC 5 cut(s) 81, 401, 436, 438, 448
BspANI GGCC 2 cut(s) 31, 351
BspFNI CGCG 1 cut(s) 438
BspLI GGNNCC 5 cut(s) 41, 51, 361, 371, 458
BspPI GGATC 4 cut(s) 34, 47, 354, 367
BspT104I TTCGAA 2 cut(s) 165, 181
BspT107I GGYRCC 2 cut(s) 49, 369
BsrBI CCGCTC 3 cut(s) 81, 401, 450
BssECI CCNNGG 2 cut(s) 125, 436
BssMI GATC 2 cut(s) 39, 359
Bst2UI CCWGG 1 cut(s) 139
Bst4CI ACNGT 1 cut(s) 461
BstBI TTCGAA 2 cut(s) 165, 181
BstC8I GCNNGC 1 cut(s) 429
BstDSI CCRYGG 2 cut(s) 125, 436
BstFNI CGCG 1 cut(s) 438
BstKTI GATC 2 cut(s) 42, 362
BstMBI GATC 2 cut(s) 39, 359
BstMWI GCNNNNNNNGC 3 cut(s) 113, 202, 268
BstNI CCWGG 1 cut(s) 139
BstSCI CCNGG 1 cut(s) 137
BstUI CGCG 1 cut(s) 438
BstX2I RGATCY 2 cut(s) 39, 359
BstYI RGATCY 2 cut(s) 39, 359
BsuRI GGCC 2 cut(s) 31, 351
BtgI CCRYGG 2 cut(s) 125, 436
BtsI GCAGTG 2 cut(s) 69, 389
BtsIMutI CAGTG 2 cut(s) 69, 389
Cac8I GCNNGC 1 cut(s) 429
Cfr13I GGNCC 3 cut(s) 7, 29, 327
Cfr42I CCGCGG 1 cut(s) 439
CviAII CATG 3 cut(s) 33, 353, 468
CviJI RGCY 6 cut(s) 31, 107, 142, 351, 427, 431
CviKI_1 RGCY 6 cut(s) 31, 107, 142, 351, 427, 431
DpnI GATC 2 cut(s) 41, 361
DpnII GATC 2 cut(s) 39, 359
Eco47I GGWCC 2 cut(s) 7, 327
EcoRII CCWGG 1 cut(s) 137
FaeI CATG 3 cut(s) 36, 356, 471
FaiI YATR 7 cut(s) 21, 34, 236, 302, 341, 354, 469
FalI AAGNNNNNCTT 2 cut(s) 416, 448
FatI CATG 3 cut(s) 32, 352, 467
FauI CCCGC 2 cut(s) 74, 394
FspBI CTAG 1 cut(s) 453
HaeIII GGCC 2 cut(s) 31, 351
Hin1II CATG 3 cut(s) 36, 356, 471
HinfI GANTC 3 cut(s) 167, 183, 249
Hpy188I TCNGA 2 cut(s) 44, 364
HpyAV CCTTC 4 cut(s) 75, 121, 395, 442
HpyCH4III ACNGT 1 cut(s) 461
HpyF10VI GCNNNNNNNGC 3 cut(s) 113, 202, 268
Hsp92II CATG 3 cut(s) 36, 356, 471
KspI CCGCGG 1 cut(s) 439
Kzo9I GATC 2 cut(s) 39, 359
LpnPI CCDG 4 cut(s) 124, 151, 333, 441
MaeI CTAG 1 cut(s) 453
MalI GATC 2 cut(s) 41, 361
MbiI CCGCTC 3 cut(s) 81, 401, 450
MboI GATC 2 cut(s) 39, 359
MflI RGATCY 2 cut(s) 39, 359
MluCI AATT 2 cut(s) 153, 161
MmeI TCCRAC 2 cut(s) 17, 337
MnlI CCTC 3 cut(s) 78, 398, 455
MseI TTAA 1 cut(s) 314
MspA1I CMGCKG 1 cut(s) 438
MspR9I CCNGG 1 cut(s) 139
MvaI CCWGG 1 cut(s) 139
MvnI CGCG 1 cut(s) 438
MwoI GCNNNNNNNGC 3 cut(s) 113, 202, 268
NdeII GATC 2 cut(s) 39, 359
NlaIII CATG 3 cut(s) 36, 356, 471
NlaIV GGNNCC 5 cut(s) 41, 51, 361, 371, 458
NspV TTCGAA 2 cut(s) 165, 181
PfeI GAWTC 3 cut(s) 167, 183, 249
Psp6I CCWGG 1 cut(s) 137
PspGI CCWGG 1 cut(s) 137
PspN4I GGNNCC 5 cut(s) 41, 51, 361, 371, 458
PspPI GGNCC 3 cut(s) 7, 29, 327
PsuI RGATCY 2 cut(s) 39, 359
SacII CCGCGG 1 cut(s) 439
SaqAI TTAA 1 cut(s) 314
Sau3AI GATC 2 cut(s) 39, 359
Sau96I GGNCC 3 cut(s) 7, 29, 327
ScrFI CCNGG 1 cut(s) 139
SetI ASST 4 cut(s) 89, 113, 314, 409
Sfr303I CCGCGG 1 cut(s) 439
SfuI TTCGAA 2 cut(s) 165, 181
SgrBI CCGCGG 1 cut(s) 439
SinI GGWCC 2 cut(s) 7, 327
Sse9I AATT 2 cut(s) 153, 161
SsiI CCGC 5 cut(s) 81, 401, 436, 438, 448
SspMI CTAG 1 cut(s) 453
StyD4I CCNGG 1 cut(s) 137
TaaI ACNGT 1 cut(s) 461
TaqI TCGA 3 cut(s) 165, 181, 247
TasI AATT 2 cut(s) 153, 161
TfiI GAWTC 3 cut(s) 167, 183, 249
Tru1I TTAA 1 cut(s) 314
Tru9I TTAA 1 cut(s) 314
TscAI CASTG 2 cut(s) 76, 396
TspDTI ATGAA 2 cut(s) 8, 328
TspRI CASTG 2 cut(s) 76, 396
VpaK11BI GGWCC 2 cut(s) 7, 327
XspI CTAG 1 cut(s) 453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.