pycom08g17420

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0013859
Physical Location & Seq
Reverse (-)
17610155 .. 17611180
1026 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1026 bp
ATGGACAACCAGAACACTCAGAGTGGAGGCCAAGGAGGAGGAGGCGGAGGAGCTGCTCTTCACGTGGTGGTGTTTCTATGGCTGGCCATGGGCCACCTCATCCCCTTCTTCCACATTTCCACCCTCATAGCTCAAAAGGGTCACACCGTCTTCTTCGTCTCCACCCCAAGAAACCTCTCCAGACTTGCCAAAATACCCTCCCACCTCTCCTCCCTCGTCAACCTCGTCTCCTTCCCTCTCCCCCGCCTCCCTAACCTCCCAAACGACGTCCCCTTCCACAAGCAGCAACTACTCAAAACGGCCTTCGACATGCTACAAACCCCGCTGACCGCTTTCCTGGAGTCCTCAAGACCCGACTGGGTTATTTACGACTATGCCCCTCACTGGCTTCCCGCCATAGCCGCCAGGCTCGGCGTCTCGCACGCCTTCTTCTGCTGCGTCAACGCCGCCTGCCTGGCCTACCTCGGCCCGCCGTCGGTTCTGATCAGCGGCCAGGATGGGAGGACCAAGGCCGAGGATTTCACGGTGGTCCCCAAGTGGGTCCCGTTTGAGTCCGACTTGGCGTATCGGCTCCACGAGATTGCCAAGTGGGTGCAAGCATCAAGCGGGAACGAGTCGGGCACTCACGATACGGTGCGTTTTGGGGTTGCGATTGAGGAGAGCGACGTTGTGTTTGTTAGAAGCTCTGACGAGTTTGAGCCCGAGTGGTTAAATTTGGTGAGAGAGCTTTACCGCGAGGTAAAAGTAAAACCCGTTGTTCCGGTTGGATTTCTACCGCCAAACATAGAAGAGGAGGCAAGTGAATATGATGAAACATGGGGTGGCATTAAAGGGTGGTTGGACAAGCAACGAGTCAACTCGGTGGTTTACATTGCACTCGGGACCCTTCTTTTGGGTGTTGAGAAACCCGCCCGAGTCGACTCAATCAGTGTCGGAGATGCTTCCTCCAGGGTTTGTGGAACGAGTCAAGGGTCGAGGTGTGGTACACTTGGGGTGGGCTCCGCAAGTGAGCATACTGAGTCATGA

Protein Analysis

342

Amino Acids

37.21

Weight (kDa)

5.76

Isoelectric Point (pI)

48.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013859)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49690
fragaria_vesca FvH4_5g34510
malus_domestica MD08G1200700.v1.1
prunus_persica Prupe.1G534200_v2.0.a1
pyrus_communis pycom08g17420 pycom08g17430
rosa_chinensis RchiOBHm_Chr7g0235171
rosa_laevigata RLG00000001177
rosa_multiflora Rmu_sc0004657.1_g000008 Rmu_sc0015485.1_g000005
rosa_roxburghii Rroxscaffold_3G00226240
rosa_rugosa Rorug07G0288600
rosa_samantha Rh7AG443000 Rh7AG443100 Rh7BG416000 Rh7CG464200
rosa_wichuraiana Rw7G036840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 270
AccI GTMKAC 1 cut(s) 918
AccII CGCG 1 cut(s) 735
AcoI YGGCCR 2 cut(s) 84, 490
AcsI RAATTY 1 cut(s) 712
AcvI CACGTG 1 cut(s) 64
AcyI GRCGYC 2 cut(s) 267, 414
AdeI CACNNNGTG 1 cut(s) 67
AfaI GTAC 1 cut(s) 985
AfiI CCNNNNNNNGG 4 cut(s) 384, 475, 538, 892
AjnI CCWGG 5 cut(s) 336, 404, 453, 492, 947
AluBI AGCT 4 cut(s) 53, 131, 684, 727
AluI AGCT 4 cut(s) 53, 131, 684, 727
Alw26I GTCTC 3 cut(s) 163, 232, 421
Ama87I CYCGRG 3 cut(s) 701, 878, 912
AoxI GGCC 8 cut(s) 28, 84, 91, 300, 456, 466, 490, 510
ApeKI GCWGC 3 cut(s) 53, 283, 435
ApoI RAATTY 1 cut(s) 712
ArsI GACNNNNNNTTYG 4 cut(s) 656, 688, 874, 906
AspS9I GGNCC 6 cut(s) 91, 467, 504, 529, 541, 882
AsuHPI GGTGA 1 cut(s) 730
AvaI CYCGRG 3 cut(s) 701, 878, 912
AvaII GGWCC 4 cut(s) 504, 529, 541, 882
BaeGI GKGCMC 1 cut(s) 623
BalI TGGCCA 1 cut(s) 86
BanII GRGCYC 2 cut(s) 702, 1001
BauI CACGAG 1 cut(s) 575
BbrPI CACGTG 1 cut(s) 64
BbsI GAAGAC 1 cut(s) 142
BbvI GCAGC 3 cut(s) 40, 295, 422
BccI CCATC 1 cut(s) 491
BceAI ACGGC 2 cut(s) 315, 457
BciT130I CCWGG 5 cut(s) 338, 406, 455, 494, 949
BclI TGATCA 1 cut(s) 483
BcoDI GTCTC 3 cut(s) 163, 232, 421
BglI GCCNNNNNGGC 1 cut(s) 455
BisI GCNGC 6 cut(s) 54, 284, 402, 436, 447, 490
BlsI GCNGC 6 cut(s) 55, 285, 403, 437, 448, 491
Bme1390I CCNGG 5 cut(s) 338, 406, 455, 494, 949
Bme18I GGWCC 4 cut(s) 504, 529, 541, 882
BmeT110I CYCGRG 3 cut(s) 701, 878, 912
BmgT120I GGNCC 6 cut(s) 91, 467, 504, 529, 541, 882
BmiI GGNNCC 7 cut(s) 531, 542, 543, 572, 883, 884, 1000
BmrFI CCNGG 5 cut(s) 338, 406, 455, 494, 949
BmrI ACTGGG 1 cut(s) 367
BmsI GCATC 2 cut(s) 608, 928
BmuI ACTGGG 1 cut(s) 367
BpiI GAAGAC 1 cut(s) 142
BpmI CTGGAG 3 cut(s) 163, 359, 931
BpuEI CTTGAG 1 cut(s) 331
BsaAI YACGTR 1 cut(s) 64
BsaHI GRCGYC 2 cut(s) 267, 414
BsaJI CCNNGG 6 cut(s) 31, 87, 463, 507, 513, 948
BsaWI WCCGGW 1 cut(s) 760
BsaXI ACNNNNNCTCC 4 cut(s) 194, 212, 224, 242
Bsc4I CCNNNNNNNGG 4 cut(s) 384, 475, 538, 892
Bse1I ACTGG 2 cut(s) 362, 389
Bse3DI GCAATG 1 cut(s) 870
BseBI CCWGG 5 cut(s) 338, 406, 455, 494, 949
BseDI CCNNGG 6 cut(s) 31, 87, 463, 507, 513, 948
BseGI GGATG 2 cut(s) 99, 502
BseLI CCNNNNNNNGG 4 cut(s) 384, 475, 538, 892
BseMI GCAATG 1 cut(s) 870
BseMII CTCAG 2 cut(s) 32, 1008
BseNI ACTGG 2 cut(s) 362, 389
BseRI GAGGAG 6 cut(s) 51, 54, 63, 199, 671, 806
BseSI GKGCMC 1 cut(s) 623
BseXI GCAGC 3 cut(s) 40, 295, 422
Bsh1236I CGCG 1 cut(s) 735
BshFI GGCC 8 cut(s) 30, 86, 93, 302, 458, 468, 492, 512
BsiHKCI CYCGRG 3 cut(s) 701, 878, 912
BsiSI CCGG 1 cut(s) 761
BslFI GGGAC 4 cut(s) 254, 515, 527, 895
BslI CCNNNNNNNGG 4 cut(s) 384, 475, 538, 892
BsmAI GTCTC 3 cut(s) 163, 232, 421
BsmBI CGTCTC 3 cut(s) 163, 232, 421
BsmFI GGGAC 4 cut(s) 254, 515, 527, 895
BsnI GGCC 8 cut(s) 30, 86, 93, 302, 458, 468, 492, 512
BsoBI CYCGRG 3 cut(s) 701, 878, 912
Bsp1286I GDGCHC 3 cut(s) 623, 702, 1001
Bsp143I GATC 1 cut(s) 483
Bsp19I CCATGG 1 cut(s) 87
BspANI GGCC 8 cut(s) 30, 86, 93, 302, 458, 468, 492, 512
BspCNI CTCAG 2 cut(s) 31, 1009
BspFNI CGCG 1 cut(s) 735
BspHI TCATGA 1 cut(s) 1022
BspLI GGNNCC 7 cut(s) 531, 542, 543, 572, 883, 884, 1000
BspQI GCTCTTC 1 cut(s) 63
BsrDI GCAATG 1 cut(s) 870
BsrI ACTGG 2 cut(s) 362, 389
BssECI CCNNGG 6 cut(s) 31, 87, 463, 507, 513, 948
BssMI GATC 1 cut(s) 483
BssNI GRCGYC 2 cut(s) 267, 414
BssSI CACGAG 1 cut(s) 575
BssT1I CCWWGG 3 cut(s) 31, 87, 507
Bst2BI CACGAG 1 cut(s) 575
Bst2UI CCWGG 5 cut(s) 338, 406, 455, 494, 949
Bst4CI ACNGT 3 cut(s) 148, 526, 634
Bst6I CTCTTC 2 cut(s) 63, 783
BstACI GRCGYC 2 cut(s) 267, 414
BstBAI YACGTR 1 cut(s) 64
BstC8I GCNNGC 5 cut(s) 84, 423, 451, 470, 597
BstDEI CTNAG 2 cut(s) 18, 1017
BstDSI CCRYGG 1 cut(s) 87
BstF5I GGATG 2 cut(s) 99, 502
BstFNI CGCG 1 cut(s) 735
BstKTI GATC 1 cut(s) 486
BstMAI GTCTC 3 cut(s) 163, 232, 421
BstMBI GATC 1 cut(s) 483
BstMWI GCNNNNNNNGC 2 cut(s) 401, 455
BstNI CCWGG 5 cut(s) 338, 406, 455, 494, 949
BstNSI RCATGY 1 cut(s) 313
BstSCI CCNGG 5 cut(s) 336, 404, 453, 492, 947
BstSLI GKGCMC 1 cut(s) 623
BstUI CGCG 1 cut(s) 735
BstV1I GCAGC 3 cut(s) 40, 295, 422
BstV2I GAAGAC 1 cut(s) 142
BsuRI GGCC 8 cut(s) 30, 86, 93, 302, 458, 468, 492, 512
BtgI CCRYGG 1 cut(s) 87
BtsCI GGATG 2 cut(s) 99, 502
BtsIMutI CAGTG 2 cut(s) 382, 934
Cac8I GCNNGC 5 cut(s) 84, 423, 451, 470, 597
CciI TCATGA 1 cut(s) 1022
Cfr13I GGNCC 6 cut(s) 91, 467, 504, 529, 541, 882
CseI GACGC 2 cut(s) 403, 427
Csp6I GTAC 1 cut(s) 984
CviAII CATG 4 cut(s) 88, 310, 816, 1023
CviQI GTAC 1 cut(s) 984
DdeI CTNAG 2 cut(s) 18, 1017
DpnI GATC 1 cut(s) 485
DpnII GATC 1 cut(s) 483
DraIII CACNNNGTG 1 cut(s) 67
EaeI YGGCCR 2 cut(s) 84, 490
Eam1104I CTCTTC 2 cut(s) 63, 783
EarI CTCTTC 2 cut(s) 63, 783
EciI GGCGGA 1 cut(s) 60
Eco130I CCWWGG 3 cut(s) 31, 87, 507
Eco24I GRGCYC 2 cut(s) 702, 1001
Eco47I GGWCC 4 cut(s) 504, 529, 541, 882
Eco72I CACGTG 1 cut(s) 64
Eco88I CYCGRG 3 cut(s) 701, 878, 912
EcoO109I RGGNCCY 2 cut(s) 541, 882
EcoRII CCWGG 5 cut(s) 336, 404, 453, 492, 947
EcoT14I CCWWGG 3 cut(s) 31, 87, 507
EcoT38I GRGCYC 2 cut(s) 702, 1001
ErhI CCWWGG 3 cut(s) 31, 87, 507
Esp3I CGTCTC 3 cut(s) 163, 232, 421
FaeI CATG 4 cut(s) 91, 313, 819, 1026
FaqI GGGAC 4 cut(s) 254, 515, 527, 895
FatI CATG 4 cut(s) 87, 309, 815, 1022
FauI CCCGC 6 cut(s) 251, 330, 400, 477, 599, 916
FbaI TGATCA 1 cut(s) 483
FblI GTMKAC 1 cut(s) 918
Fnu4HI GCNGC 6 cut(s) 54, 284, 402, 436, 447, 490
FokI GGATG 2 cut(s) 86, 509
FriOI GRGCYC 2 cut(s) 702, 1001
Fsp4HI GCNGC 6 cut(s) 54, 284, 402, 436, 447, 490
GluI GCNGC 6 cut(s) 54, 284, 402, 436, 447, 490
GsuI CTGGAG 3 cut(s) 163, 359, 931
HaeIII GGCC 8 cut(s) 30, 86, 93, 302, 458, 468, 492, 512
HapII CCGG 1 cut(s) 761
HgaI GACGC 2 cut(s) 403, 427
Hin1I GRCGYC 2 cut(s) 267, 414
Hin1II CATG 4 cut(s) 91, 313, 819, 1026
HincII GTYRAC 4 cut(s) 220, 442, 856, 919
HindII GTYRAC 4 cut(s) 220, 442, 856, 919
HinfI GANTC 8 cut(s) 341, 551, 614, 852, 915, 920, 964, 1019
HpaII CCGG 1 cut(s) 761
HphI GGTGA 1 cut(s) 730
Hpy166II GTNNAC 6 cut(s) 220, 442, 856, 868, 919, 986
Hpy188I TCNGA 5 cut(s) 21, 483, 556, 688, 935
Hpy188III TCNNGA 5 cut(s) 180, 348, 626, 880, 1023
Hpy8I GTNNAC 6 cut(s) 220, 442, 856, 868, 919, 986
Hpy99I CGWCG 3 cut(s) 269, 478, 668
HpyAV CCTTC 6 cut(s) 115, 241, 283, 313, 436, 896
HpyCH4III ACNGT 3 cut(s) 148, 526, 634
HpyCH4IV ACGT 3 cut(s) 63, 267, 666
HpyCH4V TGCA 2 cut(s) 595, 875
HpyF10VI GCNNNNNNNGC 2 cut(s) 401, 455
HpyF3I CTNAG 2 cut(s) 18, 1017
HpySE526I ACGT 3 cut(s) 63, 267, 666
Hsp92I GRCGYC 2 cut(s) 267, 414
Hsp92II CATG 4 cut(s) 91, 313, 819, 1026
KflI GGGWCCC 2 cut(s) 541, 882
Ksp22I TGATCA 1 cut(s) 483
Kzo9I GATC 1 cut(s) 483
LguI GCTCTTC 1 cut(s) 63
LmnI GCTCC 3 cut(s) 50, 576, 1004
Lsp1109I GCAGC 3 cut(s) 40, 295, 422
LweI GCATC 2 cut(s) 608, 928
MaeII ACGT 3 cut(s) 63, 267, 666
MaeIII GTNAC 1 cut(s) 140
MalI GATC 1 cut(s) 485
MboI GATC 1 cut(s) 483
MboII GAAGA 6 cut(s) 50, 100, 142, 145, 421, 800
MhlI GDGCHC 3 cut(s) 623, 702, 1001
MlsI TGGCCA 1 cut(s) 86
MluCI AATT 1 cut(s) 712
MluNI TGGCCA 1 cut(s) 86
MlyI GAGTC 7 cut(s) 350, 560, 623, 861, 914, 924, 973
MmeI TCCRAC 4 cut(s) 579, 745, 819, 913
Mox20I TGGCCA 1 cut(s) 86
MscI TGGCCA 1 cut(s) 86
MseI TTAA 2 cut(s) 710, 828
Msp20I TGGCCA 1 cut(s) 86
MspA1I CMGCKG 2 cut(s) 325, 489
MspI CCGG 1 cut(s) 761
MspR9I CCNGG 5 cut(s) 338, 406, 455, 494, 949
MvaI CCWGG 5 cut(s) 338, 406, 455, 494, 949
MvnI CGCG 1 cut(s) 735
MwoI GCNNNNNNNGC 2 cut(s) 401, 455
NcoI CCATGG 1 cut(s) 87
NdeII GATC 1 cut(s) 483
NlaIII CATG 4 cut(s) 91, 313, 819, 1026
NlaIV GGNNCC 7 cut(s) 531, 542, 543, 572, 883, 884, 1000
NmeAIII GCCGAG 3 cut(s) 390, 444, 538
NmuCI GTSAC 1 cut(s) 140
NspI RCATGY 1 cut(s) 313
PagI TCATGA 1 cut(s) 1022
PciSI GCTCTTC 1 cut(s) 63
PcsI WCGNNNNNNNCGW 1 cut(s) 222
PfoI TCCNGGA 1 cut(s) 336
PkrI GCNGC 6 cut(s) 55, 285, 403, 437, 448, 491
PleI GAGTC 7 cut(s) 349, 559, 622, 860, 914, 923, 972
PmaCI CACGTG 1 cut(s) 64
PmlI CACGTG 1 cut(s) 64
PpsI GAGTC 7 cut(s) 349, 559, 622, 860, 914, 923, 972
Ppu21I YACGTR 1 cut(s) 64
PpuMI RGGWCCY 2 cut(s) 541, 882
Psp5II RGGWCCY 2 cut(s) 541, 882
Psp6I CCWGG 5 cut(s) 336, 404, 453, 492, 947
PspCI CACGTG 1 cut(s) 64
PspGI CCWGG 5 cut(s) 336, 404, 453, 492, 947
PspN4I GGNNCC 7 cut(s) 531, 542, 543, 572, 883, 884, 1000
PspPI GGNCC 6 cut(s) 91, 467, 504, 529, 541, 882
PspPPI RGGWCCY 2 cut(s) 541, 882
RsaI GTAC 1 cut(s) 985
RsaNI GTAC 1 cut(s) 984
SalI GTCGAC 1 cut(s) 917
SapI GCTCTTC 1 cut(s) 63
SaqAI TTAA 2 cut(s) 710, 828
SatI GCNGC 6 cut(s) 54, 284, 402, 436, 447, 490
Sau3AI GATC 1 cut(s) 483
Sau96I GGNCC 6 cut(s) 91, 467, 504, 529, 541, 882
SchI GAGTC 7 cut(s) 350, 560, 623, 861, 914, 924, 973
ScrFI CCNGG 5 cut(s) 338, 406, 455, 494, 949
SduI GDGCHC 3 cut(s) 623, 702, 1001
SfaNI GCATC 2 cut(s) 608, 928
SinI GGWCC 4 cut(s) 504, 529, 541, 882
SmlI CTYRAG 1 cut(s) 346
SmoI CTYRAG 1 cut(s) 346
Sse9I AATT 1 cut(s) 712
StyD4I CCNGG 5 cut(s) 336, 404, 453, 492, 947
StyI CCWWGG 3 cut(s) 31, 87, 507
TaaI ACNGT 3 cut(s) 148, 526, 634
TaiI ACGT 3 cut(s) 66, 270, 669
TaqI TCGA 3 cut(s) 306, 918, 974
TasI AATT 1 cut(s) 712
TauI GCSGC 3 cut(s) 404, 449, 492
Tru1I TTAA 2 cut(s) 710, 828
Tru9I TTAA 2 cut(s) 710, 828
TscAI CASTG 2 cut(s) 389, 934
TseFI GTSAC 1 cut(s) 140
TseI GCWGC 3 cut(s) 53, 283, 435
Tsp45I GTSAC 1 cut(s) 140
TspDTI ATGAA 1 cut(s) 825
TspRI CASTG 2 cut(s) 389, 934
VpaK11BI GGWCC 4 cut(s) 504, 529, 541, 882
XapI RAATTY 1 cut(s) 712
XceI RCATGY 1 cut(s) 313
XmiI GTMKAC 1 cut(s) 918
ZraI GACGTC 1 cut(s) 268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.