pycom08g17430

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0013859
Physical Location & Seq
Reverse (-)
17613941 .. 17615135
1195 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 963 bp
ATGCTCCAACCCCTGTTGACCGCTTTCCTCGAGTCCTCAAGACCCGACTGGGTTATTTACGACTATACCCCTCACTGGCTTCCCGCCACCGCCGCCAGGCTCGGCATCTCACGCGCCTTCTTCTGCTGCTTCAACGCCGCCTGCATGTCCTACATCGGCCCGCCGTCCCTTCTAGTCAGCGGCAAGGATGGGAGGACCAAGGCCGAGGATTTCACGGTGGTCCCCAAGTGGGTCCCGTTCGAGTTCGACATGGTGTATCGGCTCCACGAGATTGCCAAGTGGGTGGAAAGATCAAGCGAAGACGAGTCGGTCACTCCCGATACGGTGCGTTTTGGGGTTACGATTGAGCAGAGCGACGTTGTGTTTATTAGAAGCTCTGAGGAGTTGGAGCCCGAGTGGTTAAATTTGATGAGACAACTTTACCGCGAGGTAAAAGTAAAACCCGTTGTTCCGGTCGGATTTTTACCGCCAAACATAGAAGAGGAGGCAATTGGTGAATTTGATGAAGCATGGGGTGGCATTAAAGAGTGGTTGGACAAGCAACGATCAGGAGGAACTCAACGAGTTGGCTCTCGGGTTGGAGCTATCCGGGGAACCCTTCTTTTGGGTGTTGAGAAACCCGCCCGAGTCGACTCAGTCAGTGTCGGGGATGCTTCCTCCTGGATTTGTGGAACGAGTCAAGGGTCGAGGAGTGGTACACTTGGGGTGGGCTCCGCAAGTGGCTTAATGCTCGATTGGGGAATGGGAAGGGGCTCGGGGTGGAAATACCTAGGAACGAGCGAGACGGGTCGTTTGCGGGTTACTCGGTGGCTGAGCTTGATTTGTTTGGAGATAGAAACAAGAACAGTCGGATGGTGGATGAATTCATATGTTTTCTCGAGGAGAATAGGCCACCGAGGGTTACAGAATAACTTTACTAGGCAAGTTTATGTCACAAATTGCAACAAAAATGTGTCCTTTTGA

Protein Analysis

321

Amino Acids

35.94

Weight (kDa)

6.85

Isoelectric Point (pI)

51.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013859)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49690
fragaria_vesca FvH4_5g34510
malus_domestica MD08G1200700.v1.1
prunus_persica Prupe.1G534200_v2.0.a1
pyrus_communis pycom08g17420 pycom08g17430
rosa_chinensis RchiOBHm_Chr7g0235171
rosa_laevigata RLG00000001177
rosa_multiflora Rmu_sc0004657.1_g000008 Rmu_sc0015485.1_g000005
rosa_roxburghii Rroxscaffold_3G00226240
rosa_rugosa Rorug07G0288600
rosa_samantha Rh7AG443000 Rh7AG443100 Rh7BG416000 Rh7CG464200
rosa_wichuraiana Rw7G036840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 308
AccI GTMKAC 1 cut(s) 630
AccII CGCG 2 cut(s) 114, 426
AcsI RAATTY 3 cut(s) 403, 497, 862
AfaI GTAC 1 cut(s) 697
AfiI CCNNNNNNNGG 4 cut(s) 75, 96, 229, 604
AgsI TTSAA 1 cut(s) 133
AjnI CCWGG 2 cut(s) 95, 659
AluBI AGCT 3 cut(s) 375, 584, 816
AluI AGCT 3 cut(s) 375, 584, 816
Alw26I GTCTC 2 cut(s) 406, 776
Ama87I CYCGRG 6 cut(s) 29, 392, 573, 624, 754, 877
AoxI GGCC 3 cut(s) 157, 201, 889
ApeKI GCWGC 1 cut(s) 126
ApoI RAATTY 3 cut(s) 403, 497, 862
ArsI GACNNNNNNTTYG 2 cut(s) 775, 807
AspA2I CCTAGG 1 cut(s) 769
AspLEI GCGC 1 cut(s) 116
AspS9I GGNCC 4 cut(s) 158, 195, 220, 232
AsuC2I CCSGG 1 cut(s) 590
AsuHPI GGTGA 1 cut(s) 506
AvaI CYCGRG 6 cut(s) 29, 392, 573, 624, 754, 877
AvaII GGWCC 3 cut(s) 195, 220, 232
AvrII CCTAGG 1 cut(s) 769
BanII GRGCYC 3 cut(s) 393, 713, 755
BauI CACGAG 1 cut(s) 266
BbsI GAAGAC 1 cut(s) 306
BbvI GCAGC 1 cut(s) 113
BccI CCATC 2 cut(s) 182, 846
BceAI ACGGC 1 cut(s) 148
BciT130I CCWGG 2 cut(s) 97, 661
BcnI CCSGG 1 cut(s) 590
BcoDI GTCTC 2 cut(s) 406, 776
BfaI CTAG 3 cut(s) 173, 770, 918
BisI GCNGC 4 cut(s) 93, 127, 138, 181
BlnI CCTAGG 1 cut(s) 769
BlpI GCTNAGC 1 cut(s) 812
BlsI GCNGC 4 cut(s) 94, 128, 139, 182
Bme1390I CCNGG 3 cut(s) 97, 590, 661
Bme18I GGWCC 3 cut(s) 195, 220, 232
BmeT110I CYCGRG 6 cut(s) 29, 392, 573, 624, 754, 877
BmgT120I GGNCC 4 cut(s) 158, 195, 220, 232
BmiI GGNNCC 7 cut(s) 222, 233, 234, 263, 390, 595, 712
BmrFI CCNGG 3 cut(s) 97, 590, 661
BmrI ACTGGG 1 cut(s) 58
BmsI GCATC 2 cut(s) 114, 640
BmuI ACTGGG 1 cut(s) 58
BpiI GAAGAC 1 cut(s) 306
Bpu1102I GCTNAGC 1 cut(s) 812
BpuEI CTTGAG 1 cut(s) 22
BpuMI CCSGG 1 cut(s) 590
BsaJI CCNNGG 5 cut(s) 198, 204, 589, 769, 895
BsaWI WCCGGW 1 cut(s) 451
BsaXI ACNNNNNCTCC 2 cut(s) 380, 410
Bsc4I CCNNNNNNNGG 4 cut(s) 75, 96, 229, 604
Bse1I ACTGG 2 cut(s) 53, 80
BseBI CCWGG 2 cut(s) 97, 661
BseDI CCNNGG 5 cut(s) 198, 204, 589, 769, 895
BseGI GGATG 4 cut(s) 193, 655, 857, 864
BseLI CCNNNNNNNGG 4 cut(s) 75, 96, 229, 604
BseMII CTCAG 3 cut(s) 369, 648, 803
BseNI ACTGG 2 cut(s) 53, 80
BseRI GAGGAG 4 cut(s) 395, 497, 703, 895
BseXI GCAGC 1 cut(s) 113
Bsh1236I CGCG 2 cut(s) 114, 426
Bsh1285I CGRYCG 1 cut(s) 456
BshFI GGCC 3 cut(s) 159, 203, 891
BsiEI CGRYCG 1 cut(s) 456
BsiHKCI CYCGRG 6 cut(s) 29, 392, 573, 624, 754, 877
BsiSI CCGG 2 cut(s) 452, 589
BslFI GGGAC 3 cut(s) 151, 206, 218
BslI CCNNNNNNNGG 4 cut(s) 75, 96, 229, 604
BsmAI GTCTC 2 cut(s) 406, 776
BsmBI CGTCTC 1 cut(s) 776
BsmFI GGGAC 3 cut(s) 151, 206, 218
BsnI GGCC 3 cut(s) 159, 203, 891
BsoBI CYCGRG 6 cut(s) 29, 392, 573, 624, 754, 877
Bsp1286I GDGCHC 3 cut(s) 393, 713, 755
Bsp143I GATC 2 cut(s) 290, 545
Bsp1720I GCTNAGC 1 cut(s) 812
BspANI GGCC 3 cut(s) 159, 203, 891
BspCNI CTCAG 3 cut(s) 370, 647, 804
BspFNI CGCG 2 cut(s) 114, 426
BspLI GGNNCC 7 cut(s) 222, 233, 234, 263, 390, 595, 712
BsrI ACTGG 2 cut(s) 53, 80
BssECI CCNNGG 5 cut(s) 198, 204, 589, 769, 895
BssMI GATC 2 cut(s) 290, 545
BssSI CACGAG 1 cut(s) 266
BssT1I CCWWGG 2 cut(s) 198, 769
Bst2BI CACGAG 1 cut(s) 266
Bst2UI CCWGG 2 cut(s) 97, 661
Bst4CI ACNGT 3 cut(s) 217, 325, 847
Bst6I CTCTTC 1 cut(s) 474
BstC8I GCNNGC 2 cut(s) 142, 161
BstDEI CTNAG 3 cut(s) 378, 634, 812
BstF5I GGATG 4 cut(s) 193, 655, 857, 864
BstFNI CGCG 2 cut(s) 114, 426
BstHHI GCGC 1 cut(s) 116
BstKTI GATC 2 cut(s) 293, 548
BstMAI GTCTC 2 cut(s) 406, 776
BstMBI GATC 2 cut(s) 290, 545
BstMCI CGRYCG 1 cut(s) 456
BstMWI GCNNNNNNNGC 2 cut(s) 92, 111
BstNI CCWGG 2 cut(s) 97, 661
BstNSI RCATGY 1 cut(s) 148
BstSCI CCNGG 3 cut(s) 95, 588, 659
BstUI CGCG 2 cut(s) 114, 426
BstV1I GCAGC 1 cut(s) 113
BstV2I GAAGAC 1 cut(s) 306
BstXI CCANNNNNNTGG 1 cut(s) 283
BsuRI GGCC 3 cut(s) 159, 203, 891
BtsCI GGATG 4 cut(s) 193, 655, 857, 864
BtsIMutI CAGTG 2 cut(s) 73, 646
Cac8I GCNNGC 2 cut(s) 142, 161
CfoI GCGC 1 cut(s) 116
Cfr13I GGNCC 4 cut(s) 158, 195, 220, 232
Csp6I GTAC 1 cut(s) 696
CviAII CATG 3 cut(s) 145, 250, 510
CviQI GTAC 1 cut(s) 696
DdeI CTNAG 3 cut(s) 378, 634, 812
DpnI GATC 2 cut(s) 292, 547
DpnII GATC 2 cut(s) 290, 545
DrdI GACNNNNNNGTC 1 cut(s) 308
DseDI GACNNNNNNGTC 1 cut(s) 308
Eam1104I CTCTTC 1 cut(s) 474
EarI CTCTTC 1 cut(s) 474
Eco130I CCWWGG 2 cut(s) 198, 769
Eco24I GRGCYC 3 cut(s) 393, 713, 755
Eco47I GGWCC 3 cut(s) 195, 220, 232
Eco88I CYCGRG 6 cut(s) 29, 392, 573, 624, 754, 877
EcoO109I RGGNCCY 1 cut(s) 232
EcoRI GAATTC 1 cut(s) 862
EcoRII CCWGG 2 cut(s) 95, 659
EcoT14I CCWWGG 2 cut(s) 198, 769
EcoT38I GRGCYC 3 cut(s) 393, 713, 755
ErhI CCWWGG 2 cut(s) 198, 769
Esp3I CGTCTC 1 cut(s) 776
FaeI CATG 3 cut(s) 148, 253, 513
FaiI YATR 8 cut(s) 66, 146, 251, 476, 511, 868, 870, 930
FaqI GGGAC 3 cut(s) 151, 206, 218
FatI CATG 3 cut(s) 144, 249, 509
FauI CCCGC 4 cut(s) 91, 168, 628, 789
FauNDI CATATG 1 cut(s) 868
FblI GTMKAC 1 cut(s) 630
Fnu4HI GCNGC 4 cut(s) 93, 127, 138, 181
FokI GGATG 4 cut(s) 200, 662, 864, 871
FriOI GRGCYC 3 cut(s) 393, 713, 755
Fsp4HI GCNGC 4 cut(s) 93, 127, 138, 181
FspBI CTAG 3 cut(s) 173, 770, 918
GlaI GCGC 1 cut(s) 115
GluI GCNGC 4 cut(s) 93, 127, 138, 181
HaeIII GGCC 3 cut(s) 159, 203, 891
HapII CCGG 2 cut(s) 452, 589
HhaI GCGC 1 cut(s) 116
Hin1II CATG 3 cut(s) 148, 253, 513
Hin6I GCGC 1 cut(s) 114
HinP1I GCGC 1 cut(s) 114
HincII GTYRAC 2 cut(s) 18, 631
HindII GTYRAC 2 cut(s) 18, 631
HinfI GANTC 5 cut(s) 32, 305, 627, 632, 676
HpaII CCGG 2 cut(s) 452, 589
HphI GGTGA 1 cut(s) 506
Hpy166II GTNNAC 3 cut(s) 18, 631, 698
Hpy188I TCNGA 3 cut(s) 379, 458, 851
Hpy188III TCNNGA 4 cut(s) 39, 317, 549, 877
Hpy8I GTNNAC 3 cut(s) 18, 631, 698
Hpy99I CGWCG 1 cut(s) 359
HpyAV CCTTC 4 cut(s) 127, 179, 608, 741
HpyCH4III ACNGT 3 cut(s) 217, 325, 847
HpyCH4IV ACGT 1 cut(s) 357
HpyCH4V TGCA 2 cut(s) 144, 942
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 111
HpyF3I CTNAG 3 cut(s) 378, 634, 812
HpySE526I ACGT 1 cut(s) 357
Hsp92II CATG 3 cut(s) 148, 253, 513
HspAI GCGC 1 cut(s) 114
KflI GGGWCCC 1 cut(s) 232
Kzo9I GATC 2 cut(s) 290, 545
LmnI GCTCC 5 cut(s) 9, 267, 388, 581, 716
Lsp1109I GCAGC 1 cut(s) 113
LweI GCATC 2 cut(s) 114, 640
MaeI CTAG 3 cut(s) 173, 770, 918
MaeII ACGT 1 cut(s) 357
MaeIII GTNAC 5 cut(s) 310, 337, 799, 900, 931
MalI GATC 2 cut(s) 292, 547
MboI GATC 2 cut(s) 290, 545
MboII GAAGA 3 cut(s) 112, 311, 491
MfeI CAATTG 1 cut(s) 489
MhlI GDGCHC 3 cut(s) 393, 713, 755
MluCI AATT 5 cut(s) 403, 489, 497, 862, 937
MlyI GAGTC 5 cut(s) 41, 314, 626, 636, 685
MmeI TCCRAC 6 cut(s) 31, 366, 436, 513, 559, 829
MseI TTAA 3 cut(s) 401, 522, 725
MspA1I CMGCKG 1 cut(s) 180
MspI CCGG 2 cut(s) 452, 589
MspR9I CCNGG 3 cut(s) 97, 590, 661
MunI CAATTG 1 cut(s) 489
MvaI CCWGG 2 cut(s) 97, 661
MvnI CGCG 2 cut(s) 114, 426
MwoI GCNNNNNNNGC 2 cut(s) 92, 111
NciI CCSGG 1 cut(s) 590
NdeI CATATG 1 cut(s) 868
NdeII GATC 2 cut(s) 290, 545
NlaIII CATG 3 cut(s) 148, 253, 513
NlaIV GGNNCC 7 cut(s) 222, 233, 234, 263, 390, 595, 712
NmeAIII GCCGAG 2 cut(s) 81, 229
NmuCI GTSAC 2 cut(s) 310, 931
NspI RCATGY 1 cut(s) 148
PaeR7I CTCGAG 2 cut(s) 29, 877
PflFI GACNNNGTC 1 cut(s) 635
PfoI TCCNGGA 1 cut(s) 659
PkrI GCNGC 4 cut(s) 94, 128, 139, 182
PleI GAGTC 5 cut(s) 40, 313, 626, 635, 684
PpsI GAGTC 5 cut(s) 40, 313, 626, 635, 684
PpuMI RGGWCCY 1 cut(s) 232
Psp5II RGGWCCY 1 cut(s) 232
Psp6I CCWGG 2 cut(s) 95, 659
PspGI CCWGG 2 cut(s) 95, 659
PspN4I GGNNCC 7 cut(s) 222, 233, 234, 263, 390, 595, 712
PspPI GGNCC 4 cut(s) 158, 195, 220, 232
PspPPI RGGWCCY 1 cut(s) 232
PspXI VCTCGAGB 1 cut(s) 29
PsyI GACNNNGTC 1 cut(s) 635
RsaI GTAC 1 cut(s) 697
RsaNI GTAC 1 cut(s) 696
SalI GTCGAC 1 cut(s) 629
SaqAI TTAA 3 cut(s) 401, 522, 725
SatI GCNGC 4 cut(s) 93, 127, 138, 181
Sau3AI GATC 2 cut(s) 290, 545
Sau96I GGNCC 4 cut(s) 158, 195, 220, 232
SchI GAGTC 5 cut(s) 41, 314, 626, 636, 685
ScrFI CCNGG 3 cut(s) 97, 590, 661
SduI GDGCHC 3 cut(s) 393, 713, 755
SetI ASST 6 cut(s) 360, 377, 432, 586, 771, 818
SfaNI GCATC 2 cut(s) 114, 640
Sfr274I CTCGAG 2 cut(s) 29, 877
SinI GGWCC 3 cut(s) 195, 220, 232
SlaI CTCGAG 2 cut(s) 29, 877
SmlI CTYRAG 3 cut(s) 29, 37, 877
SmoI CTYRAG 3 cut(s) 29, 37, 877
Sse9I AATT 5 cut(s) 403, 489, 497, 862, 937
SspMI CTAG 3 cut(s) 173, 770, 918
StyD4I CCNGG 3 cut(s) 95, 588, 659
StyI CCWWGG 2 cut(s) 198, 769
TaaI ACNGT 3 cut(s) 217, 325, 847
TaiI ACGT 1 cut(s) 360
TaqI TCGA 7 cut(s) 30, 240, 246, 630, 686, 732, 878
TaqII GACCGA 1 cut(s) 298
TasI AATT 5 cut(s) 403, 489, 497, 862, 937
TauI GCSGC 3 cut(s) 95, 140, 183
Tru1I TTAA 3 cut(s) 401, 522, 725
Tru9I TTAA 3 cut(s) 401, 522, 725
TscAI CASTG 2 cut(s) 80, 646
TseFI GTSAC 2 cut(s) 310, 931
TseI GCWGC 1 cut(s) 126
Tsp45I GTSAC 2 cut(s) 310, 931
TspDTI ATGAA 3 cut(s) 519, 855, 875
TspRI CASTG 2 cut(s) 80, 646
Tth111I GACNNNGTC 1 cut(s) 635
VpaK11BI GGWCC 3 cut(s) 195, 220, 232
XapI RAATTY 3 cut(s) 403, 497, 862
XceI RCATGY 1 cut(s) 148
XhoI CTCGAG 2 cut(s) 29, 877
XmaJI CCTAGG 1 cut(s) 769
XmiI GTMKAC 1 cut(s) 630
XspI CTAG 3 cut(s) 173, 770, 918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.