pycom09g06240

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0009269
Physical Location & Seq
Forward (+)
4620279 .. 4624558
4280 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2565 bp
ATGGGAGTGAGTAGAAATAGCGACCCGAATCAAGACGGGTCAGATGAGCAGCAGAAACGATCGGTGATCTACACCTACGATGCGCCGTGGCACATCTACTCCATGAGCAGGAGCGTCCGTCGGGACGAGAAGTACCGGCTGGCCGTCGCCAGCCTCCTCGAGCAGTACCCAAACCGAGTGGAGATTGTGCAGCTGGACGACTCAAACGGGGAGATCCGGTCGGACCCCAACCTGTCCTTCGAGCACCCGTACCCGCCAACCAAGACCATCTTCATCCCGGACAAGGAGTGCCAGAAGCCAGACCTGCTGGCCACCTCCAGCGATTTCCTCCGCGTGTGGCGCATCTCGGGGGATGAGGACGACTCGGACTCCTCGTCGTCTGTGGAGCTCAAGTCCCTCCTCAACGGCAACAAGAACTCCGAGTTCTGCGGGCCCATCACCTCCTTCGACTGGAACGAGGCGGAACCCAAGCGCATCGGCACCTCCTCCATCGACACCACGTGCACCATCTGGGACATCGAGCGCGAGGCCGTGGACACCCAGCTCATCGCCCACGACAAGGAGGTGTACGACATCGCTTGGGGCGGCGTCGGTGTATTCGCCTCCGTCTCGGCGGACGGCTCCGTGAGAGTGTTTGACCTGCGCGACAAGGAGCACTCCACCATCATTTACGAGAGCTCGGAGCCGGACACCCCCTTGGTCCGCCTGGGATGGAACAAGCAGGACCCCAGGTACATGGCCACCATCATCATGGACAGCGCCAAGGTGGTGGTCCTCGACATCCGCTTCCCGACCCTCCCCGTGGTCGAGTTGCAGAGGCACCAGTCCAGCGTCAACGCCATTGCCTGGGCCCCACACAGCTCTTGCCACATCTGCACCGCCGGTGATGATTCCCAGGCCCTCATCTGGGACCTTTCCTCCATGGGGCAGCCAGTGGAGGGCGGCCTTGATCCCATTCTGGCCTACACGGCTGGGGCCGAAATCGAGCAGCTGCAGTGGTCCTCTTCCCAGCCTGATTGGGTTGCAATTGCCTTCTCTACCAAGCTTCAGATACTCAGGGGCGTGCAAGCACAAACGCATAAGCACAATCTTAAGATGGATTCCAAGGCAGCGGCTAACAATAAACCTCATGCTGTTTGTATTCCAGCTCCAGCTCAAAGCCATATAAAGGCAATGCTTAAATTTTCAAAGCTACTCCACCATAGAGGTTTTCATATAACCTTCGTCAACACAGAGTTCAACCACAACCGCTTTCTTAAATCTCTTGGATCCAACTCCCTCGACGGCTTGCCTGATTTTCGATTTGAAACCATTCCAGACGGCCTTCCACCAGACTCCAACCAAGATGCCACCCAAGACACCTCTTTAGCATCCGATGCCATCAGCAAAAACCTTTTGCCTCCGTTTCGAGACCTCCTCATAAAACTCAATGACGCGGCGATTTCGATCAATAATGTTAGTCCTCCAGTGACTTGCATTTTCTCAGATGGTTTCATGCCATTTACAATCACAGCTGCTGACGAAATTGGACTCCCCTTGGTACTCTTCTTTCCTATTTCTGCAGGCAGCTTCATGGGCTATAAACAATACCCTACTTTGGTGGAAAAGGGTATTGCACCACTCAAAGATGAGAGCTGTTTGACAAACGGCTTCTTGGACAAGGTAATAGATTGGATTCCAGGAATGAAGGATATTCGTTTAAGGGATCTACCGGCAAATTTTCGAACTACAAATCCAAACGACAGCGTGTTCAACCTCAGTTTGGAATCAGTGGAAAGAGTTGATAAAGCTTCAGCAGTTGTTGTTCATACTTTTGAAACATTGGAGCCAGATGTTTTGAATGCTCTCTCCTCAATGCTTCCACTTGTTTATGCCATTGGCCCTCTCCAATTGCTTCTCAATCACTTACCAAAAGATCCTTTGAACGATATGGGATATAGCCTGTGGAGAGAAGAAACTGAGTGCTTTGAATGGCTAGACTCAAAGCCACCAAATTCAGTTGTTTATGTGAATTTTGGCAGCATAGCAGTCATGACACCAGAACATCTTGTAGAGTTTGCATGGGGACTTGCAAATAGCAAGCTTCCATTCTTTTGGGTAATCAGGCCTGATTTGGTTGTTGGTGAATCGGCGATTTTGTCACCTGAATTTGTGGCTGAAACTAAGGACAGGGGTTTGATAGCAAGTTGGTGCCCGCAAGAGCAAGTCCTTAGCCACCCTTCAGTTGGAGGGTTTTTAACACACAGCGGTTGGAATTCGGTTGTTGAAAGTTTGTGTGCAGGAGTTCCTCTGCTTTGTTGGCCTTTCTTTGCTGACCAACAAACTAACACTTGGTGTGCTTGCAATGAATGGGATATTGGGATGGAGATTAGTAATGATGTCAAAAGAGTAGAAGTAGAGAAGCTTGTTAGAGAATTAATGGAGGGAGAAAAGGGTAAGAAAATGAAAATTAAGGTCATGCAGTGGAAGAAACTTGCAGAAGAATCCACCAGTCCAAATGGTTCCTCATCCACAAACCTGGACAATTTAGTCAATAATGTGCTATTAAGAAACTCTTTTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

855

Amino Acids

95.21

Weight (kDa)

4.93

Isoelectric Point (pI)

45.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_WDHD1_1st PF24817 140 - 308 6.4e-09 WDHD1 first WD40 domain
WD40_CDC20-Fz PF24807 143 - 341 2.7e-17 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 146 - 228 9.6e-10 THOC3 beta-propeller domain
WD40_Prp19 PF24814 146 - 225 3.5e-07 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 146 - 223 2.4e-06 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 149 - 225 1.7e-07 WDR5 beta-propeller domain
UDPGT PF00201 615 - 814 1.5e-25 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2528
Acc36I ACCTGC 2 cut(s) 312, 648
AccB1I GGYRCC 3 cut(s) 479, 819, 2190
AccB7I CCANNNNNTGG 1 cut(s) 846
AccII CGCG 4 cut(s) 333, 525, 645, 1436
AclWI GGATC 6 cut(s) 208, 944, 1263, 1276, 1713, 1910
AcoI YGGCCR 3 cut(s) 141, 309, 738
AcsI RAATTY 6 cut(s) 1181, 1717, 1993, 2011, 2147, 2254
AcuI CTGAAG 3 cut(s) 1031, 1776, 2205
AcvI CACGTG 1 cut(s) 501
AcyI GRCGYC 1 cut(s) 588
AdeI CACNNNGTG 2 cut(s) 501, 2334
AfaI GTAC 6 cut(s) 134, 167, 251, 569, 734, 1542
AflII CTTAAG 1 cut(s) 1091
AgsI TTSAA 9 cut(s) 1188, 1240, 1307, 1753, 1817, 1840, 1924, 1970, 2267
AhdI GACNNNNNGTC 1 cut(s) 373
AjnI CCWGG 6 cut(s) 705, 728, 845, 894, 1678, 2517
AjuI GAANNNNNNNTTGG 6 cut(s) 221, 253, 254, 286, 2340, 2372
AloI GAACNNNNNNTCC 2 cut(s) 1717, 1749
Alw21I GWGCWC 5 cut(s) 246, 390, 506, 657, 680
Alw26I GTCTC 2 cut(s) 613, 1404
Alw44I GTGCAC 1 cut(s) 502
AlwI GGATC 6 cut(s) 208, 944, 1263, 1276, 1713, 1910
AlwNI CAGNNNCTG 1 cut(s) 1517
Ama87I CYCGRG 2 cut(s) 158, 346
ApaI GGGCCC 2 cut(s) 435, 853
ApaLI GTGCAC 1 cut(s) 502
ApeKI GCWGC 9 cut(s) 49, 190, 928, 988, 991, 1109, 1514, 1566, 2019
ApoI RAATTY 6 cut(s) 1181, 1717, 1993, 2011, 2147, 2254
AseI ATTAAT 1 cut(s) 2417
Asp700I GAANNNNTTC 1 cut(s) 1311
AspLEI GCGC 6 cut(s) 85, 342, 474, 525, 645, 761
AsuC2I CCSGG 1 cut(s) 278
AsuHPI GGTGA 5 cut(s) 76, 430, 896, 2133, 2135
AsuII TTCGAA 1 cut(s) 1723
AvaI CYCGRG 2 cut(s) 158, 346
AvaII GGWCC 6 cut(s) 223, 700, 724, 772, 910, 999
BaeGI GKGCMC 4 cut(s) 435, 506, 853, 2195
BalI TGGCCA 2 cut(s) 311, 740
BamHI GGATCC 1 cut(s) 1268
BanI GGYRCC 3 cut(s) 479, 819, 2190
BanII GRGCYC 4 cut(s) 390, 435, 680, 853
BbrPI CACGTG 1 cut(s) 501
Bbv12I GWGCWC 5 cut(s) 246, 390, 506, 657, 680
BbvI GCAGC 9 cut(s) 61, 202, 940, 978, 1000, 1121, 1501, 1578, 2031
BceAI ACGGC 9 cut(s) 70, 128, 421, 515, 634, 984, 1300, 1336, 1663
BciT130I CCWGG 6 cut(s) 707, 730, 847, 896, 1680, 2519
BcnI CCSGG 1 cut(s) 278
BcoDI GTCTC 2 cut(s) 613, 1404
BfaI CTAG 1 cut(s) 1976
BfmI CTRYAG 2 cut(s) 992, 1560
BfoI RGCGCY 1 cut(s) 762
BfrI CTTAAG 1 cut(s) 1091
BfuAI ACCTGC 2 cut(s) 312, 648
BglI GCCNNNNNGGC 1 cut(s) 968
Bme1390I CCNGG 7 cut(s) 278, 707, 730, 847, 896, 1680, 2519
Bme18I GGWCC 6 cut(s) 223, 700, 724, 772, 910, 999
BmeRI GACNNNNNGTC 1 cut(s) 373
BmeT110I CYCGRG 2 cut(s) 158, 346
BmrFI CCNGG 7 cut(s) 278, 707, 730, 847, 896, 1680, 2519
BmsI GCATC 6 cut(s) 70, 351, 483, 1336, 1366, 1379
BplI GAGNNNNNCTC 4 cut(s) 347, 379, 1401, 1433
BpmI CTGGAG 3 cut(s) 301, 1134, 1449
Bpu10I CCTNAGC 1 cut(s) 2210
Bpu14I TTCGAA 1 cut(s) 1723
BpuEI CTTGAG 1 cut(s) 374
BpuMI CCSGG 1 cut(s) 278
BsaAI YACGTR 1 cut(s) 501
BsaBI GATNNNNATC 1 cut(s) 1445
BsaHI GRCGYC 1 cut(s) 588
BsaI GGTCTC 1 cut(s) 1404
BsaWI WCCGGW 1 cut(s) 216
Bse118I RCCGGY 3 cut(s) 135, 881, 1711
Bse1I ACTGG 5 cut(s) 455, 823, 932, 1466, 2490
Bse3DI GCAATG 3 cut(s) 840, 1179, 2350
Bse8I GATNNNNATC 1 cut(s) 1445
BseBI CCWGG 6 cut(s) 707, 730, 847, 896, 1680, 2519
BseGI GGATG 7 cut(s) 273, 358, 716, 780, 1370, 2367, 2507
BseJI GATNNNNATC 1 cut(s) 1445
BseMI GCAATG 3 cut(s) 840, 1179, 2350
BseMII CTCAG 4 cut(s) 1069, 1497, 1771, 1950
BseNI ACTGG 5 cut(s) 455, 823, 932, 1466, 2490
BseRI GAGGAG 6 cut(s) 146, 361, 389, 475, 1406, 1840
BseSI GKGCMC 4 cut(s) 435, 506, 853, 2195
BseXI GCAGC 9 cut(s) 61, 202, 940, 978, 1000, 1121, 1501, 1578, 2031
BseYI CCCAGC 3 cut(s) 540, 971, 1008
BsgI GTGCAG 3 cut(s) 209, 859, 2298
Bsh1236I CGCG 4 cut(s) 333, 525, 645, 1436
Bsh1285I CGRYCG 2 cut(s) 62, 221
BshNI GGYRCC 3 cut(s) 479, 819, 2190
BsiEI CGRYCG 2 cut(s) 62, 221
BsiHKAI GWGCWC 5 cut(s) 246, 390, 506, 657, 680
BsiHKCI CYCGRG 2 cut(s) 158, 346
BsiSI CCGG 6 cut(s) 136, 217, 278, 686, 882, 1712
BslFI GGGAC 5 cut(s) 137, 379, 527, 923, 2079
BsmAI GTCTC 2 cut(s) 613, 1404
BsmBI CGTCTC 1 cut(s) 613
BsmFI GGGAC 5 cut(s) 137, 379, 527, 923, 2079
BsmI GAATGC 1 cut(s) 1846
Bso31I GGTCTC 1 cut(s) 1404
BsoBI CYCGRG 2 cut(s) 158, 346
Bsp119I TTCGAA 1 cut(s) 1723
Bsp120I GGGCCC 2 cut(s) 431, 849
Bsp1286I GDGCHC 8 cut(s) 246, 390, 435, 506, 657, 680, 853, 2195
Bsp143I GATC 8 cut(s) 59, 66, 213, 949, 1268, 1446, 1705, 1915
Bsp19I CCATGG 1 cut(s) 921
BspCNI CTCAG 4 cut(s) 1068, 1496, 1770, 1951
BspFNI CGCG 4 cut(s) 333, 525, 645, 1436
BspHI TCATGA 1 cut(s) 2031
BspMAI CTGCAG 2 cut(s) 996, 1564
BspMI ACCTGC 2 cut(s) 312, 648
BspPI GGATC 6 cut(s) 208, 944, 1263, 1276, 1713, 1910
BspT104I TTCGAA 1 cut(s) 1723
BspT107I GGYRCC 3 cut(s) 479, 819, 2190
BspTI CTTAAG 1 cut(s) 1091
BspTNI GGTCTC 1 cut(s) 1404
BsrDI GCAATG 3 cut(s) 840, 1179, 2350
BsrFI RCCGGY 3 cut(s) 135, 881, 1711
BsrI ACTGG 5 cut(s) 455, 823, 932, 1466, 2490
BssAI RCCGGY 3 cut(s) 135, 881, 1711
BssMI GATC 8 cut(s) 59, 66, 213, 949, 1268, 1446, 1705, 1915
BssNI GRCGYC 1 cut(s) 588
BssT1I CCWWGG 5 cut(s) 696, 762, 921, 1104, 1536
Bst2UI CCWGG 6 cut(s) 707, 730, 847, 896, 1680, 2519
Bst6I CTCTTC 2 cut(s) 1009, 1550
BstACI GRCGYC 1 cut(s) 588
BstAFI CTTAAG 1 cut(s) 1091
BstAPI GCANNNNNTGC 1 cut(s) 1376
BstBAI YACGTR 1 cut(s) 501
BstBI TTCGAA 1 cut(s) 1723
BstDEI CTNAG 6 cut(s) 1055, 1483, 1757, 1959, 2163, 2210
BstDSI CCRYGG 4 cut(s) 86, 531, 801, 921
BstF5I GGATG 7 cut(s) 273, 358, 716, 780, 1370, 2367, 2507
BstFNI CGCG 4 cut(s) 333, 525, 645, 1436
BstH2I RGCGCY 1 cut(s) 762
BstHHI GCGC 6 cut(s) 85, 342, 474, 525, 645, 761
BstKTI GATC 8 cut(s) 62, 69, 216, 952, 1271, 1449, 1708, 1918
BstMAI GTCTC 2 cut(s) 613, 1404
BstMBI GATC 8 cut(s) 59, 66, 213, 949, 1268, 1446, 1705, 1915
BstMCI CGRYCG 2 cut(s) 62, 221
BstMWI GCNNNNNNNGC 7 cut(s) 304, 339, 873, 968, 1376, 1575, 2299
BstNI CCWGG 6 cut(s) 707, 730, 847, 896, 1680, 2519
BstSCI CCNGG 7 cut(s) 276, 705, 728, 845, 894, 1678, 2517
BstSFI CTRYAG 2 cut(s) 992, 1560
BstSLI GKGCMC 4 cut(s) 435, 506, 853, 2195
BstUI CGCG 4 cut(s) 333, 525, 645, 1436
BstV1I GCAGC 9 cut(s) 61, 202, 940, 978, 1000, 1121, 1501, 1578, 2031
BstX2I RGATCY 4 cut(s) 213, 1268, 1705, 1915
BstXI CCANNNNNNTGG 5 cut(s) 736, 751, 769, 2094, 2518
BstYI RGATCY 4 cut(s) 213, 1268, 1705, 1915
BtgI CCRYGG 4 cut(s) 86, 531, 801, 921
BtgZI GCGATG 2 cut(s) 532, 559
BtsCI GGATG 7 cut(s) 273, 358, 716, 780, 1370, 2367, 2507
BtsI GCAGTG 2 cut(s) 1001, 2468
BtsIMutI CAGTG 5 cut(s) 939, 1001, 1473, 1776, 2468
BveI ACCTGC 2 cut(s) 312, 648
CaiI CAGNNNCTG 1 cut(s) 1517
CciI TCATGA 1 cut(s) 2031
CfoI GCGC 6 cut(s) 85, 342, 474, 525, 645, 761
Cfr10I RCCGGY 3 cut(s) 135, 881, 1711
CseI GACGC 4 cut(s) 103, 577, 820, 1442
Csp6I GTAC 6 cut(s) 133, 166, 250, 568, 733, 1541
CspCI CAANNNNNGTGG 2 cut(s) 159, 194
CviQI GTAC 6 cut(s) 133, 166, 250, 568, 733, 1541
DdeI CTNAG 6 cut(s) 1055, 1483, 1757, 1959, 2163, 2210
DpnI GATC 8 cut(s) 61, 68, 215, 951, 1270, 1448, 1707, 1917
DpnII GATC 8 cut(s) 59, 66, 213, 949, 1268, 1446, 1705, 1915
DraIII CACNNNGTG 2 cut(s) 501, 2334
DrdI GACNNNNNNGTC 1 cut(s) 2528
DriI GACNNNNNGTC 1 cut(s) 373
DseDI GACNNNNNNGTC 1 cut(s) 2528
EaeI YGGCCR 3 cut(s) 141, 309, 738
Eam1104I CTCTTC 2 cut(s) 1009, 1550
Eam1105I GACNNNNNGTC 1 cut(s) 373
EarI CTCTTC 2 cut(s) 1009, 1550
EciI GGCGGA 3 cut(s) 476, 629, 692
Ecl136II GAGCTC 2 cut(s) 388, 678
Eco130I CCWWGG 5 cut(s) 696, 762, 921, 1104, 1536
Eco147I AGGCCT 1 cut(s) 2107
Eco24I GRGCYC 4 cut(s) 390, 435, 680, 853
Eco31I GGTCTC 1 cut(s) 1404
Eco47I GGWCC 6 cut(s) 223, 700, 724, 772, 910, 999
Eco53kI GAGCTC 2 cut(s) 388, 678
Eco57I CTGAAG 3 cut(s) 1031, 1776, 2205
Eco72I CACGTG 1 cut(s) 501
Eco88I CYCGRG 2 cut(s) 158, 346
EcoICRI GAGCTC 2 cut(s) 388, 678
EcoO109I RGGNCCY 4 cut(s) 724, 850, 898, 910
EcoRI GAATTC 1 cut(s) 2254
EcoRII CCWGG 6 cut(s) 705, 728, 845, 894, 1678, 2517
EcoT14I CCWWGG 5 cut(s) 696, 762, 921, 1104, 1536
EcoT38I GRGCYC 4 cut(s) 390, 435, 680, 853
ErhI CCWWGG 5 cut(s) 696, 762, 921, 1104, 1536
Esp3I CGTCTC 1 cut(s) 613
FalI AAGNNNNNCTT 3 cut(s) 254, 286, 2539
FaqI GGGAC 5 cut(s) 137, 379, 527, 923, 2079
FauI CCCGC 3 cut(s) 261, 422, 2202
FokI GGATG 7 cut(s) 260, 365, 723, 767, 1357, 2374, 2494
FriOI GRGCYC 4 cut(s) 390, 435, 680, 853
FspBI CTAG 1 cut(s) 1976
GlaI GCGC 6 cut(s) 84, 341, 473, 524, 644, 760
GsaI CCCAGC 3 cut(s) 544, 975, 1012
GsuI CTGGAG 3 cut(s) 301, 1134, 1449
HaeII RGCGCY 1 cut(s) 762
HapII CCGG 6 cut(s) 136, 217, 278, 686, 882, 1712
HgaI GACGC 4 cut(s) 103, 577, 820, 1442
HhaI GCGC 6 cut(s) 85, 342, 474, 525, 645, 761
Hin1I GRCGYC 1 cut(s) 588
Hin6I GCGC 6 cut(s) 83, 340, 472, 523, 643, 759
HinP1I GCGC 6 cut(s) 83, 340, 472, 523, 643, 759
HincII GTYRAC 2 cut(s) 835, 1228
HindII GTYRAC 2 cut(s) 835, 1228
HindIII AAGCTT 4 cut(s) 1043, 1788, 2081, 2402
HpaII CCGG 6 cut(s) 136, 217, 278, 686, 882, 1712
HphI GGTGA 5 cut(s) 76, 430, 896, 2133, 2135
Hpy166II GTNNAC 5 cut(s) 504, 535, 568, 835, 1228
Hpy188I TCNGA 8 cut(s) 43, 223, 367, 421, 682, 1050, 1375, 1486
Hpy188III TCNNGA 6 cut(s) 32, 122, 790, 1316, 1409, 2032
Hpy8I GTNNAC 5 cut(s) 504, 535, 568, 835, 1228
Hpy99I CGWCG 5 cut(s) 123, 149, 379, 593, 1286
HpyAV CCTTC 7 cut(s) 247, 454, 1042, 1231, 1334, 1681, 2229
HpyCH4IV ACGT 1 cut(s) 500
HpyF10VI GCNNNNNNNGC 7 cut(s) 304, 339, 873, 968, 1376, 1575, 2299
HpyF3I CTNAG 6 cut(s) 1055, 1483, 1757, 1959, 2163, 2210
HpySE526I ACGT 1 cut(s) 500
Hsp92I GRCGYC 1 cut(s) 588
HspAI GCGC 6 cut(s) 83, 340, 472, 523, 643, 759
Kzo9I GATC 8 cut(s) 59, 66, 213, 949, 1268, 1446, 1705, 1915
LmnI GCTCC 7 cut(s) 111, 385, 626, 652, 682, 1153, 1825
Lsp1109I GCAGC 9 cut(s) 61, 202, 940, 978, 1000, 1121, 1501, 1578, 2031
LweI GCATC 6 cut(s) 70, 351, 483, 1336, 1366, 1379
MaeI CTAG 1 cut(s) 1976
MaeII ACGT 1 cut(s) 500
MaeIII GTNAC 2 cut(s) 1468, 2139
MalI GATC 8 cut(s) 61, 68, 215, 951, 1270, 1448, 1707, 1917
MboI GATC 8 cut(s) 59, 66, 213, 949, 1268, 1446, 1705, 1915
MboII GAAGA 6 cut(s) 262, 996, 1537, 1964, 2479, 2492
MfeI CAATTG 2 cut(s) 1026, 1889
MflI RGATCY 4 cut(s) 213, 1268, 1705, 1915
MhlI GDGCHC 8 cut(s) 246, 390, 435, 506, 657, 680, 853, 2195
MlsI TGGCCA 2 cut(s) 311, 740
MluNI TGGCCA 2 cut(s) 311, 740
MlyI GAGTC 6 cut(s) 194, 356, 362, 1328, 1524, 1973
MmeI TCCRAC 5 cut(s) 201, 1296, 1362, 2206, 2231
Mox20I TGGCCA 2 cut(s) 311, 740
MroXI GAANNNNTTC 1 cut(s) 1311
MscI TGGCCA 2 cut(s) 311, 740
MseI TTAA 8 cut(s) 1092, 1179, 1257, 1700, 2237, 2417, 2451, 2546
MslI CAYNNNNRTG 1 cut(s) 749
Msp20I TGGCCA 2 cut(s) 311, 740
MspA1I CMGCKG 5 cut(s) 193, 991, 1112, 1514, 2247
MspCI CTTAAG 1 cut(s) 1091
MspI CCGG 6 cut(s) 136, 217, 278, 686, 882, 1712
MspR9I CCNGG 7 cut(s) 278, 707, 730, 847, 896, 1680, 2519
MunI CAATTG 2 cut(s) 1026, 1889
Mva1269I GAATGC 1 cut(s) 1846
MvaI CCWGG 6 cut(s) 707, 730, 847, 896, 1680, 2519
MvnI CGCG 4 cut(s) 333, 525, 645, 1436
MwoI GCNNNNNNNGC 7 cut(s) 304, 339, 873, 968, 1376, 1575, 2299
NciI CCSGG 1 cut(s) 278
NcoI CCATGG 1 cut(s) 921
NdeII GATC 8 cut(s) 59, 66, 213, 949, 1268, 1446, 1705, 1915
NmeAIII GCCGAG 1 cut(s) 590
NmuCI GTSAC 2 cut(s) 1468, 2139
NspV TTCGAA 1 cut(s) 1723
PaeR7I CTCGAG 1 cut(s) 158
PagI TCATGA 1 cut(s) 2031
PceI AGGCCT 1 cut(s) 2107
PcsI WCGNNNNNNNCGW 2 cut(s) 371, 453
PctI GAATGC 1 cut(s) 1846
PdmI GAANNNNTTC 1 cut(s) 1311
PfeI GAWTC 7 cut(s) 28, 890, 1100, 1675, 1766, 2126, 2483
PflMI CCANNNNNTGG 1 cut(s) 846
PfoI TCCNGGA 2 cut(s) 276, 1678
Ple19I CGATCG 1 cut(s) 62
PleI GAGTC 6 cut(s) 194, 356, 362, 1328, 1524, 1973
PmaCI CACGTG 1 cut(s) 501
PmlI CACGTG 1 cut(s) 501
PpsI GAGTC 6 cut(s) 194, 356, 362, 1328, 1524, 1973
Ppu21I YACGTR 1 cut(s) 501
PpuMI RGGWCCY 2 cut(s) 724, 910
PshBI ATTAAT 1 cut(s) 2417
Psp124BI GAGCTC 2 cut(s) 390, 680
Psp5II RGGWCCY 2 cut(s) 724, 910
Psp6I CCWGG 6 cut(s) 705, 728, 845, 894, 1678, 2517
PspCI CACGTG 1 cut(s) 501
PspFI CCCAGC 3 cut(s) 540, 971, 1008
PspGI CCWGG 6 cut(s) 705, 728, 845, 894, 1678, 2517
PspOMI GGGCCC 2 cut(s) 431, 849
PspPPI RGGWCCY 2 cut(s) 724, 910
PspXI VCTCGAGB 1 cut(s) 158
PstI CTGCAG 2 cut(s) 996, 1564
PstNI CAGNNNCTG 1 cut(s) 1517
PsuI RGATCY 4 cut(s) 213, 1268, 1705, 1915
PvuI CGATCG 1 cut(s) 62
PvuII CAGCTG 3 cut(s) 193, 991, 1514
RsaI GTAC 6 cut(s) 134, 167, 251, 569, 734, 1542
RsaNI GTAC 6 cut(s) 133, 166, 250, 568, 733, 1541
RseI CAYNNNNRTG 1 cut(s) 749
SacI GAGCTC 2 cut(s) 390, 680
SaqAI TTAA 8 cut(s) 1092, 1179, 1257, 1700, 2237, 2417, 2451, 2546
Sau3AI GATC 8 cut(s) 59, 66, 213, 949, 1268, 1446, 1705, 1915
SchI GAGTC 6 cut(s) 194, 356, 362, 1328, 1524, 1973
ScrFI CCNGG 7 cut(s) 278, 707, 730, 847, 896, 1680, 2519
SduI GDGCHC 8 cut(s) 246, 390, 435, 506, 657, 680, 853, 2195
SfaNI GCATC 6 cut(s) 70, 351, 483, 1336, 1366, 1379
SfcI CTRYAG 2 cut(s) 992, 1560
Sfr274I CTCGAG 1 cut(s) 158
SfuI TTCGAA 1 cut(s) 1723
SgrAI CRCCGGYG 1 cut(s) 881
SinI GGWCC 6 cut(s) 223, 700, 724, 772, 910, 999
SlaI CTCGAG 1 cut(s) 158
SmiMI CAYNNNNRTG 1 cut(s) 749
SmlI CTYRAG 3 cut(s) 158, 389, 1091
SmoI CTYRAG 3 cut(s) 158, 389, 1091
SseBI AGGCCT 1 cut(s) 2107
SspMI CTAG 1 cut(s) 1976
SstI GAGCTC 2 cut(s) 390, 680
StuI AGGCCT 1 cut(s) 2107
StyD4I CCNGG 7 cut(s) 276, 705, 728, 845, 894, 1678, 2517
StyI CCWWGG 5 cut(s) 696, 762, 921, 1104, 1536
TaiI ACGT 1 cut(s) 503
TauI GCSGC 4 cut(s) 588, 945, 1115, 1439
TfiI GAWTC 7 cut(s) 28, 890, 1100, 1675, 1766, 2126, 2483
Tru1I TTAA 8 cut(s) 1092, 1179, 1257, 1700, 2237, 2417, 2451, 2546
Tru9I TTAA 8 cut(s) 1092, 1179, 1257, 1700, 2237, 2417, 2451, 2546
TscAI CASTG 5 cut(s) 939, 1001, 1473, 1776, 2468
TseFI GTSAC 2 cut(s) 1468, 2139
TseI GCWGC 9 cut(s) 49, 190, 928, 988, 991, 1109, 1514, 1566, 2019
Tsp45I GTSAC 2 cut(s) 1468, 2139
TspDTI ATGAA 8 cut(s) 262, 1202, 1483, 1561, 1700, 1796, 2361, 2459
TspGWI ACGGA 4 cut(s) 107, 595, 613, 1392
TspRI CASTG 5 cut(s) 939, 1001, 1473, 1776, 2468
Van91I CCANNNNNTGG 1 cut(s) 846
Vha464I CTTAAG 1 cut(s) 1091
VneI GTGCAC 1 cut(s) 502
VpaK11BI GGWCC 6 cut(s) 223, 700, 724, 772, 910, 999
VspI ATTAAT 1 cut(s) 2417
XapI RAATTY 6 cut(s) 1181, 1717, 1993, 2011, 2147, 2254
XcmI CCANNNNNNNNNTGG 2 cut(s) 748, 2222
XhoI CTCGAG 1 cut(s) 158
XmnI GAANNNNTTC 1 cut(s) 1311
XspI CTAG 1 cut(s) 1976
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.