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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1201700.v1.1 MD09G1201800.v1.1 MD17G1181700.v1.1 |
| prunus_persica | Prupe.3G057400_v2.0.a1 |
| pyrus_communis | pycom09g11850 pycom09g11860 pycom17g19140 |
| rosa_chinensis | RchiOBHm_Chr2g0140801 RchiOBHm_Chr2g0140811 |
| rosa_laevigata | RLG00000019898 |
| rosa_multiflora | Rmu_sc0003342.1_g000039 |
| rosa_roxburghii | Rroxscaffold_2G00104490 |
| rosa_rugosa | Rorug02G0365300 |
| rosa_samantha | Rh2AG416600 Rh2BG426200 Rh2CG402800 Rh2DG436100 |
| rosa_wichuraiana | Rw2G034080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1073 |
| Acc36I | ACCTGC | 1 cut(s) | 1073 |
| AccIII | TCCGGA | 2 cut(s) | 892, 1021 |
| AciI | CCGC | 2 cut(s) | 610, 628 |
| AcsI | RAATTY | 3 cut(s) | 1560, 1636, 1691 |
| AcuI | CTGAAG | 1 cut(s) | 1551 |
| AcyI | GRCGYC | 1 cut(s) | 246 |
| AfaI | GTAC | 1 cut(s) | 679 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 360, 627 |
| AflII | CTTAAG | 4 cut(s) | 229, 776, 905, 1034 |
| AflIII | ACRYGT | 2 cut(s) | 168, 321 |
| AjnI | CCWGG | 2 cut(s) | 868, 997 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 645, 677 |
| AluBI | AGCT | 7 cut(s) | 191, 350, 455, 836, 1292, 1382, 1529 |
| AluI | AGCT | 7 cut(s) | 191, 350, 455, 836, 1292, 1382, 1529 |
| Alw26I | GTCTC | 3 cut(s) | 486, 777, 1221 |
| Aor13HI | TCCGGA | 2 cut(s) | 892, 1021 |
| AoxI | GGCC | 6 cut(s) | 363, 405, 560, 596, 646, 879 |
| ApaI | GGGCCC | 1 cut(s) | 367 |
| ApeKI | GCWGC | 4 cut(s) | 188, 347, 1266, 1292 |
| ApoI | RAATTY | 3 cut(s) | 1560, 1636, 1691 |
| AspLEI | GCGC | 1 cut(s) | 728 |
| AspS9I | GGNCC | 5 cut(s) | 363, 364, 1333, 1395, 1658 |
| AsuC2I | CCSGG | 1 cut(s) | 572 |
| AsuHPI | GGTGA | 9 cut(s) | 165, 318, 725, 747, 1097, 1528, 1586, 1597, 1634 |
| AsuII | TTCGAA | 1 cut(s) | 425 |
| AvaII | GGWCC | 3 cut(s) | 1333, 1395, 1658 |
| BaeGI | GKGCMC | 1 cut(s) | 367 |
| BanII | GRGCYC | 3 cut(s) | 143, 296, 367 |
| BbsI | GAAGAC | 1 cut(s) | 1077 |
| BbvI | GCAGC | 4 cut(s) | 200, 359, 1278, 1279 |
| BccI | CCATC | 6 cut(s) | 313, 761, 890, 1019, 1236, 1669 |
| BciT130I | CCWGG | 2 cut(s) | 870, 999 |
| BcnI | CCSGG | 1 cut(s) | 572 |
| BcoDI | GTCTC | 3 cut(s) | 486, 777, 1221 |
| BfaI | CTAG | 2 cut(s) | 650, 741 |
| BfmI | CTRYAG | 3 cut(s) | 186, 345, 1191 |
| BfoI | RGCGCY | 1 cut(s) | 729 |
| BfrI | CTTAAG | 4 cut(s) | 229, 776, 905, 1034 |
| BfuAI | ACCTGC | 1 cut(s) | 1073 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 625 |
| BisI | GCNGC | 5 cut(s) | 189, 348, 629, 1267, 1293 |
| BlsI | GCNGC | 5 cut(s) | 190, 349, 630, 1268, 1294 |
| Bme1390I | CCNGG | 3 cut(s) | 572, 870, 999 |
| Bme18I | GGWCC | 3 cut(s) | 1333, 1395, 1658 |
| BmgT120I | GGNCC | 5 cut(s) | 363, 364, 1333, 1395, 1658 |
| BmiI | GGNNCC | 4 cut(s) | 365, 605, 1334, 1396 |
| BmrFI | CCNGG | 3 cut(s) | 572, 870, 999 |
| BmsI | GCATC | 6 cut(s) | 95, 514, 1078, 1246, 1416, 1578 |
| BpiI | GAAGAC | 1 cut(s) | 1077 |
| Bpu14I | TTCGAA | 1 cut(s) | 425 |
| BpuEI | CTTGAG | 1 cut(s) | 468 |
| BpuMI | CCSGG | 1 cut(s) | 572 |
| Bsa29I | ATCGAT | 1 cut(s) | 1684 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1680 |
| BsaHI | GRCGYC | 1 cut(s) | 246 |
| BsaI | GGTCTC | 1 cut(s) | 777 |
| BsaJI | CCNNGG | 3 cut(s) | 593, 599, 1398 |
| BsaWI | WCCGGW | 2 cut(s) | 892, 1021 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 233, 263 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 360, 627 |
| Bse1I | ACTGG | 2 cut(s) | 675, 715 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1680 |
| BseAI | TCCGGA | 2 cut(s) | 892, 1021 |
| BseBI | CCWGG | 2 cut(s) | 870, 999 |
| BseCI | ATCGAT | 1 cut(s) | 1684 |
| BseDI | CCNNGG | 3 cut(s) | 593, 599, 1398 |
| BseGI | GGATG | 5 cut(s) | 889, 901, 1030, 1456, 1661 |
| BseJI | GATNNNNATC | 1 cut(s) | 1680 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 360, 627 |
| BseMII | CTCAG | 1 cut(s) | 1632 |
| BseNI | ACTGG | 2 cut(s) | 675, 715 |
| BseRI | GAGGAG | 4 cut(s) | 46, 1127, 1139, 1415 |
| BseSI | GKGCMC | 1 cut(s) | 367 |
| BseXI | GCAGC | 4 cut(s) | 200, 359, 1278, 1279 |
| BshFI | GGCC | 6 cut(s) | 365, 407, 562, 598, 648, 881 |
| BshVI | ATCGAT | 1 cut(s) | 1684 |
| BsiSI | CCGG | 3 cut(s) | 572, 893, 1022 |
| BslFI | GGGAC | 3 cut(s) | 1042, 1346, 1408 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 360, 627 |
| BsmAI | GTCTC | 3 cut(s) | 486, 777, 1221 |
| BsmFI | GGGAC | 3 cut(s) | 1042, 1346, 1408 |
| BsmI | GAATGC | 1 cut(s) | 1269 |
| BsnI | GGCC | 6 cut(s) | 365, 407, 562, 598, 648, 881 |
| Bso31I | GGTCTC | 1 cut(s) | 777 |
| Bsp119I | TTCGAA | 1 cut(s) | 425 |
| Bsp120I | GGGCCC | 1 cut(s) | 363 |
| Bsp1286I | GDGCHC | 3 cut(s) | 143, 296, 367 |
| Bsp13I | TCCGGA | 2 cut(s) | 892, 1021 |
| Bsp143I | GATC | 4 cut(s) | 100, 1143, 1681, 1685 |
| BspACI | CCGC | 2 cut(s) | 610, 628 |
| BspANI | GGCC | 6 cut(s) | 365, 407, 562, 598, 648, 881 |
| BspCNI | CTCAG | 1 cut(s) | 1633 |
| BspDI | ATCGAT | 1 cut(s) | 1684 |
| BspEI | TCCGGA | 2 cut(s) | 892, 1021 |
| BspLI | GGNNCC | 4 cut(s) | 365, 605, 1334, 1396 |
| BspMAI | CTGCAG | 2 cut(s) | 190, 349 |
| BspMI | ACCTGC | 1 cut(s) | 1073 |
| BspT104I | TTCGAA | 1 cut(s) | 425 |
| BspTI | CTTAAG | 4 cut(s) | 229, 776, 905, 1034 |
| BspTNI | GGTCTC | 1 cut(s) | 777 |
| BsrI | ACTGG | 2 cut(s) | 675, 715 |
| BssECI | CCNNGG | 3 cut(s) | 593, 599, 1398 |
| BssMI | GATC | 4 cut(s) | 100, 1143, 1681, 1685 |
| BssNI | GRCGYC | 1 cut(s) | 246 |
| Bst2UI | CCWGG | 2 cut(s) | 870, 999 |
| Bst6I | CTCTTC | 2 cut(s) | 1131, 1416 |
| BstACI | GRCGYC | 1 cut(s) | 246 |
| BstAFI | CTTAAG | 4 cut(s) | 229, 776, 905, 1034 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1088 |
| BstBI | TTCGAA | 1 cut(s) | 425 |
| BstDEI | CTNAG | 2 cut(s) | 388, 1641 |
| BstEII | GGTNACC | 1 cut(s) | 574 |
| BstF5I | GGATG | 5 cut(s) | 889, 901, 1030, 1456, 1661 |
| BstH2I | RGCGCY | 1 cut(s) | 729 |
| BstHHI | GCGC | 1 cut(s) | 728 |
| BstKTI | GATC | 4 cut(s) | 103, 1146, 1684, 1688 |
| BstMAI | GTCTC | 3 cut(s) | 486, 777, 1221 |
| BstMBI | GATC | 4 cut(s) | 100, 1143, 1681, 1685 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 533, 625, 1088 |
| BstNI | CCWGG | 2 cut(s) | 870, 999 |
| BstNSI | RCATGY | 2 cut(s) | 172, 325 |
| BstPI | GGTNACC | 1 cut(s) | 574 |
| BstSCI | CCNGG | 3 cut(s) | 570, 868, 997 |
| BstSFI | CTRYAG | 3 cut(s) | 186, 345, 1191 |
| BstSLI | GKGCMC | 1 cut(s) | 367 |
| BstV1I | GCAGC | 4 cut(s) | 200, 359, 1278, 1279 |
| BstV2I | GAAGAC | 1 cut(s) | 1077 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 550 |
| Bsu15I | ATCGAT | 1 cut(s) | 1684 |
| BsuRI | GGCC | 6 cut(s) | 365, 407, 562, 598, 648, 881 |
| BsuTUI | ATCGAT | 1 cut(s) | 1684 |
| BtsCI | GGATG | 5 cut(s) | 889, 901, 1030, 1456, 1661 |
| BtsI | GCAGTG | 1 cut(s) | 207 |
| BtsIMutI | CAGTG | 3 cut(s) | 207, 708, 966 |
| BveI | ACCTGC | 1 cut(s) | 1073 |
| CfoI | GCGC | 1 cut(s) | 728 |
| Cfr13I | GGNCC | 5 cut(s) | 363, 364, 1333, 1395, 1658 |
| ClaI | ATCGAT | 1 cut(s) | 1684 |
| CseI | GACGC | 2 cut(s) | 50, 254 |
| Csp6I | GTAC | 1 cut(s) | 678 |
| CviAII | CATG | 7 cut(s) | 169, 275, 322, 434, 521, 1249, 1565 |
| CviQI | GTAC | 1 cut(s) | 678 |
| DdeI | CTNAG | 2 cut(s) | 388, 1641 |
| DpnI | GATC | 4 cut(s) | 102, 1145, 1683, 1687 |
| DpnII | GATC | 4 cut(s) | 100, 1143, 1681, 1685 |
| Eam1104I | CTCTTC | 2 cut(s) | 1131, 1416 |
| EarI | CTCTTC | 2 cut(s) | 1131, 1416 |
| Eco147I | AGGCCT | 2 cut(s) | 407, 598 |
| Eco24I | GRGCYC | 3 cut(s) | 143, 296, 367 |
| Eco31I | GGTCTC | 1 cut(s) | 777 |
| Eco47I | GGWCC | 3 cut(s) | 1333, 1395, 1658 |
| Eco57I | CTGAAG | 1 cut(s) | 1551 |
| Eco91I | GGTNACC | 1 cut(s) | 574 |
| EcoO109I | RGGNCCY | 2 cut(s) | 363, 364 |
| EcoO65I | GGTNACC | 1 cut(s) | 574 |
| EcoRI | GAATTC | 2 cut(s) | 1560, 1636 |
| EcoRII | CCWGG | 2 cut(s) | 868, 997 |
| EcoT38I | GRGCYC | 3 cut(s) | 143, 296, 367 |
| FaeI | CATG | 7 cut(s) | 172, 278, 325, 437, 524, 1252, 1568 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 212, 244, 371, 403, 673, 705 |
| FaqI | GGGAC | 3 cut(s) | 1042, 1346, 1408 |
| FatI | CATG | 7 cut(s) | 168, 274, 321, 433, 520, 1248, 1564 |
| FauNDI | CATATG | 1 cut(s) | 565 |
| Fnu4HI | GCNGC | 5 cut(s) | 189, 348, 629, 1267, 1293 |
| FokI | GGATG | 5 cut(s) | 876, 908, 1037, 1463, 1648 |
| FriOI | GRGCYC | 3 cut(s) | 143, 296, 367 |
| Fsp4HI | GCNGC | 5 cut(s) | 189, 348, 629, 1267, 1293 |
| FspBI | CTAG | 2 cut(s) | 650, 741 |
| GlaI | GCGC | 1 cut(s) | 727 |
| GluI | GCNGC | 5 cut(s) | 189, 348, 629, 1267, 1293 |
| HaeII | RGCGCY | 1 cut(s) | 729 |
| HaeIII | GGCC | 6 cut(s) | 365, 407, 562, 598, 648, 881 |
| HapII | CCGG | 3 cut(s) | 572, 893, 1022 |
| HgaI | GACGC | 2 cut(s) | 50, 254 |
| HhaI | GCGC | 1 cut(s) | 728 |
| Hin1I | GRCGYC | 1 cut(s) | 246 |
| Hin1II | CATG | 7 cut(s) | 172, 278, 325, 437, 524, 1252, 1568 |
| Hin6I | GCGC | 1 cut(s) | 726 |
| HinP1I | GCGC | 1 cut(s) | 726 |
| HinfI | GANTC | 3 cut(s) | 37, 686, 1030 |
| HpaII | CCGG | 3 cut(s) | 572, 893, 1022 |
| HphI | GGTGA | 9 cut(s) | 165, 318, 725, 747, 1097, 1528, 1586, 1597, 1634 |
| Hpy188III | TCNNGA | 6 cut(s) | 216, 375, 764, 893, 1022, 1147 |
| Hpy99I | CGWCG | 1 cut(s) | 248 |
| HpyAV | CCTTC | 5 cut(s) | 51, 1150, 1238, 1453, 1547 |
| HpyCH4V | TGCA | 7 cut(s) | 86, 188, 347, 1091, 1266, 1429, 1648 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 533, 625, 1088 |
| HpyF3I | CTNAG | 2 cut(s) | 388, 1641 |
| Hsp92I | GRCGYC | 1 cut(s) | 246 |
| Hsp92II | CATG | 7 cut(s) | 172, 278, 325, 437, 524, 1252, 1568 |
| HspAI | GCGC | 1 cut(s) | 726 |
| Kpn2I | TCCGGA | 2 cut(s) | 892, 1021 |
| Kzo9I | GATC | 4 cut(s) | 100, 1143, 1681, 1685 |
| LmnI | GCTCC | 1 cut(s) | 1379 |
| Lsp1109I | GCAGC | 4 cut(s) | 200, 359, 1278, 1279 |
| LweI | GCATC | 6 cut(s) | 95, 514, 1078, 1246, 1416, 1578 |
| MaeI | CTAG | 2 cut(s) | 650, 741 |
| MaeIII | GTNAC | 6 cut(s) | 171, 324, 574, 730, 988, 1622 |
| MalI | GATC | 4 cut(s) | 102, 1145, 1683, 1687 |
| MboI | GATC | 4 cut(s) | 100, 1143, 1681, 1685 |
| MfeI | CAATTG | 1 cut(s) | 1284 |
| MhlI | GDGCHC | 3 cut(s) | 143, 296, 367 |
| MlyI | GAGTC | 1 cut(s) | 1024 |
| MmeI | TCCRAC | 1 cut(s) | 1636 |
| MroI | TCCGGA | 2 cut(s) | 892, 1021 |
| MseI | TTAA | 7 cut(s) | 230, 468, 777, 906, 1035, 1166, 1374 |
| MslI | CAYNNNNRTG | 1 cut(s) | 894 |
| MspCI | CTTAAG | 4 cut(s) | 229, 776, 905, 1034 |
| MspI | CCGG | 3 cut(s) | 572, 893, 1022 |
| MspR9I | CCNGG | 3 cut(s) | 572, 870, 999 |
| MunI | CAATTG | 1 cut(s) | 1284 |
| Mva1269I | GAATGC | 1 cut(s) | 1269 |
| MvaI | CCWGG | 2 cut(s) | 870, 999 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 533, 625, 1088 |
| NciI | CCSGG | 1 cut(s) | 572 |
| NdeI | CATATG | 1 cut(s) | 565 |
| NdeII | GATC | 4 cut(s) | 100, 1143, 1681, 1685 |
| NlaIII | CATG | 7 cut(s) | 172, 278, 325, 437, 524, 1252, 1568 |
| NlaIV | GGNNCC | 4 cut(s) | 365, 605, 1334, 1396 |
| NmuCI | GTSAC | 4 cut(s) | 171, 324, 730, 1622 |
| NspI | RCATGY | 2 cut(s) | 172, 325 |
| NspV | TTCGAA | 1 cut(s) | 425 |
| PaqCI | CACCTGC | 1 cut(s) | 1073 |
| PceI | AGGCCT | 2 cut(s) | 407, 598 |
| PciI | ACATGT | 2 cut(s) | 168, 321 |
| PctI | GAATGC | 1 cut(s) | 1269 |
| PfeI | GAWTC | 2 cut(s) | 37, 686 |
| PkrI | GCNGC | 5 cut(s) | 190, 349, 630, 1268, 1294 |
| PleI | GAGTC | 1 cut(s) | 1024 |
| PpsI | GAGTC | 1 cut(s) | 1024 |
| PscI | ACATGT | 2 cut(s) | 168, 321 |
| Psp6I | CCWGG | 2 cut(s) | 868, 997 |
| PspEI | GGTNACC | 1 cut(s) | 574 |
| PspGI | CCWGG | 2 cut(s) | 868, 997 |
| PspN4I | GGNNCC | 4 cut(s) | 365, 605, 1334, 1396 |
| PspOMI | GGGCCC | 1 cut(s) | 363 |
| PspPI | GGNCC | 5 cut(s) | 363, 364, 1333, 1395, 1658 |
| PstI | CTGCAG | 2 cut(s) | 190, 349 |
| RsaI | GTAC | 1 cut(s) | 679 |
| RsaNI | GTAC | 1 cut(s) | 678 |
| RseI | CAYNNNNRTG | 1 cut(s) | 894 |
| SaqAI | TTAA | 7 cut(s) | 230, 468, 777, 906, 1035, 1166, 1374 |
| SatI | GCNGC | 5 cut(s) | 189, 348, 629, 1267, 1293 |
| Sau3AI | GATC | 4 cut(s) | 100, 1143, 1681, 1685 |
| Sau96I | GGNCC | 5 cut(s) | 363, 364, 1333, 1395, 1658 |
| SchI | GAGTC | 1 cut(s) | 1024 |
| ScrFI | CCNGG | 3 cut(s) | 572, 870, 999 |
| SduI | GDGCHC | 3 cut(s) | 143, 296, 367 |
| SfaNI | GCATC | 6 cut(s) | 95, 514, 1078, 1246, 1416, 1578 |
| SfcI | CTRYAG | 3 cut(s) | 186, 345, 1191 |
| SfuI | TTCGAA | 1 cut(s) | 425 |
| SinI | GGWCC | 3 cut(s) | 1333, 1395, 1658 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 894 |
| SmlI | CTYRAG | 5 cut(s) | 229, 483, 776, 905, 1034 |
| SmoI | CTYRAG | 5 cut(s) | 229, 483, 776, 905, 1034 |
| SseBI | AGGCCT | 2 cut(s) | 407, 598 |
| SsiI | CCGC | 2 cut(s) | 610, 628 |
| SspI | AATATT | 1 cut(s) | 107 |
| SspMI | CTAG | 2 cut(s) | 650, 741 |
| StuI | AGGCCT | 2 cut(s) | 407, 598 |
| StyD4I | CCNGG | 3 cut(s) | 570, 868, 997 |
| TaqI | TCGA | 4 cut(s) | 47, 308, 425, 1684 |
| TaqII | GACCGA | 1 cut(s) | 1412 |
| TatI | WGTACW | 1 cut(s) | 677 |
| TauI | GCSGC | 1 cut(s) | 631 |
| TfiI | GAWTC | 2 cut(s) | 37, 686 |
| Tru1I | TTAA | 7 cut(s) | 230, 468, 777, 906, 1035, 1166, 1374 |
| Tru9I | TTAA | 7 cut(s) | 230, 468, 777, 906, 1035, 1166, 1374 |
| TscAI | CASTG | 3 cut(s) | 214, 715, 973 |
| TseFI | GTSAC | 4 cut(s) | 171, 324, 730, 1622 |
| TseI | GCWGC | 4 cut(s) | 188, 347, 1266, 1292 |
| Tsp45I | GTSAC | 4 cut(s) | 171, 324, 730, 1622 |
| TspDTI | ATGAA | 8 cut(s) | 33, 804, 933, 1083, 1238, 1452, 1467, 1553 |
| TspGWI | ACGGA | 1 cut(s) | 1654 |
| TspRI | CASTG | 3 cut(s) | 214, 715, 973 |
| Vha464I | CTTAAG | 4 cut(s) | 229, 776, 905, 1034 |
| VpaK11BI | GGWCC | 3 cut(s) | 1333, 1395, 1658 |
| XapI | RAATTY | 3 cut(s) | 1560, 1636, 1691 |
| XceI | RCATGY | 2 cut(s) | 172, 325 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 707 |
| XspI | CTAG | 2 cut(s) | 650, 741 |