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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1201700.v1.1 MD09G1201800.v1.1 MD17G1181700.v1.1 |
| prunus_persica | Prupe.3G057400_v2.0.a1 |
| pyrus_communis | pycom09g11850 pycom09g11860 pycom17g19140 |
| rosa_chinensis | RchiOBHm_Chr2g0140801 RchiOBHm_Chr2g0140811 |
| rosa_laevigata | RLG00000019898 |
| rosa_multiflora | Rmu_sc0003342.1_g000039 |
| rosa_roxburghii | Rroxscaffold_2G00104490 |
| rosa_rugosa | Rorug02G0365300 |
| rosa_samantha | Rh2AG416600 Rh2BG426200 Rh2CG402800 Rh2DG436100 |
| rosa_wichuraiana | Rw2G034080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 402, 1987 |
| AccII | CGCG | 1 cut(s) | 173 |
| AciI | CCGC | 4 cut(s) | 51, 171, 173, 2365 |
| AclWI | GGATC | 1 cut(s) | 954 |
| AcsI | RAATTY | 5 cut(s) | 313, 1156, 1330, 1544, 1595 |
| AcuI | CTGAAG | 2 cut(s) | 1233, 1260 |
| AcyI | GRCGYC | 1 cut(s) | 403 |
| AfaI | GTAC | 1 cut(s) | 875 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1984, 2180, 2346 |
| AflIII | ACRYGT | 1 cut(s) | 153 |
| AjnI | CCWGG | 2 cut(s) | 840, 1357 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1032, 1064 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1044, 1076 |
| AluBI | AGCT | 8 cut(s) | 1048, 1211, 1636, 1673, 2037, 2202, 2242, 2271 |
| AluI | AGCT | 8 cut(s) | 1048, 1211, 1636, 1673, 2037, 2202, 2242, 2271 |
| Alw21I | GWGCWC | 1 cut(s) | 2244 |
| Alw26I | GTCTC | 4 cut(s) | 839, 1553, 1693, 1717 |
| AlwI | GGATC | 1 cut(s) | 954 |
| AoxI | GGCC | 5 cut(s) | 264, 335, 371, 421, 1582 |
| ApeKI | GCWGC | 3 cut(s) | 2034, 2152, 2367 |
| ApoI | RAATTY | 5 cut(s) | 313, 1156, 1330, 1544, 1595 |
| AspA2I | CCTAGG | 1 cut(s) | 424 |
| AspLEI | GCGC | 1 cut(s) | 405 |
| AsuHPI | GGTGA | 7 cut(s) | 224, 626, 1286, 1604, 1783, 2021, 2090 |
| AvrII | CCTAGG | 1 cut(s) | 424 |
| BanI | GGYRCC | 2 cut(s) | 402, 1987 |
| BanII | GRGCYC | 1 cut(s) | 2244 |
| BbsI | GAAGAC | 3 cut(s) | 21, 321, 1926 |
| Bbv12I | GWGCWC | 1 cut(s) | 2244 |
| BbvI | GCAGC | 3 cut(s) | 2046, 2164, 2379 |
| BccI | CCATC | 7 cut(s) | 73, 446, 590, 695, 1402, 1531, 1583 |
| BceAI | ACGGC | 2 cut(s) | 390, 2140 |
| BciT130I | CCWGG | 2 cut(s) | 842, 1359 |
| BcoDI | GTCTC | 4 cut(s) | 839, 1553, 1693, 1717 |
| BfaI | CTAG | 7 cut(s) | 425, 498, 531, 806, 1289, 1427, 1527 |
| BfmI | CTRYAG | 2 cut(s) | 1035, 1167 |
| BfoI | RGCGCY | 1 cut(s) | 406 |
| BisI | GCNGC | 4 cut(s) | 174, 2035, 2153, 2368 |
| BlnI | CCTAGG | 1 cut(s) | 424 |
| BlsI | GCNGC | 4 cut(s) | 175, 2036, 2154, 2369 |
| Bme1390I | CCNGG | 2 cut(s) | 842, 1359 |
| BmiI | GGNNCC | 5 cut(s) | 404, 1479, 1789, 1989, 2185 |
| BmrFI | CCNGG | 2 cut(s) | 842, 1359 |
| BmrI | ACTGGG | 1 cut(s) | 2336 |
| BmsI | GCATC | 4 cut(s) | 80, 607, 1211, 1426 |
| BmuI | ACTGGG | 1 cut(s) | 2336 |
| BpiI | GAAGAC | 3 cut(s) | 21, 321, 1926 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2113, 2145 |
| BpmI | CTGGAG | 2 cut(s) | 267, 1129 |
| BpuEI | CTTGAG | 2 cut(s) | 898, 1720 |
| Bsa29I | ATCGAT | 1 cut(s) | 137 |
| BsaHI | GRCGYC | 1 cut(s) | 403 |
| BsaI | GGTCTC | 3 cut(s) | 839, 1553, 1693 |
| BsaJI | CCNNGG | 5 cut(s) | 171, 368, 424, 1563, 2250 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1984, 2180, 2346 |
| Bse1I | ACTGG | 5 cut(s) | 236, 284, 1112, 1789, 2342 |
| Bse3DI | GCAATG | 4 cut(s) | 442, 783, 971, 2331 |
| BseBI | CCWGG | 2 cut(s) | 842, 1359 |
| BseCI | ATCGAT | 1 cut(s) | 137 |
| BseDI | CCNNGG | 5 cut(s) | 171, 368, 424, 1563, 2250 |
| BseGI | GGATG | 5 cut(s) | 664, 685, 1351, 1573, 1929 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1984, 2180, 2346 |
| BseMI | GCAATG | 4 cut(s) | 442, 783, 971, 2331 |
| BseMII | CTCAG | 6 cut(s) | 1317, 1326, 1872, 2202, 2223, 2271 |
| BseNI | ACTGG | 5 cut(s) | 236, 284, 1112, 1789, 2342 |
| BseRI | GAGGAG | 8 cut(s) | 581, 749, 881, 895, 996, 1028, 1136, 1646 |
| BseXI | GCAGC | 3 cut(s) | 2046, 2164, 2379 |
| BseYI | CCCAGC | 1 cut(s) | 2005 |
| Bsh1236I | CGCG | 1 cut(s) | 173 |
| BshFI | GGCC | 5 cut(s) | 266, 337, 373, 423, 1584 |
| BshNI | GGYRCC | 2 cut(s) | 402, 1987 |
| BshVI | ATCGAT | 1 cut(s) | 137 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2244 |
| BslFI | GGGAC | 3 cut(s) | 142, 1895, 2368 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1984, 2180, 2346 |
| BsmAI | GTCTC | 4 cut(s) | 839, 1553, 1693, 1717 |
| BsmFI | GGGAC | 3 cut(s) | 142, 1895, 2368 |
| BsnI | GGCC | 5 cut(s) | 266, 337, 373, 423, 1584 |
| Bso31I | GGTCTC | 3 cut(s) | 839, 1553, 1693 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2244 |
| Bsp143I | GATC | 4 cut(s) | 946, 1315, 1414, 2351 |
| Bsp19I | CCATGG | 2 cut(s) | 1563, 2250 |
| BspACI | CCGC | 4 cut(s) | 51, 171, 173, 2365 |
| BspANI | GGCC | 5 cut(s) | 266, 337, 373, 423, 1584 |
| BspCNI | CTCAG | 6 cut(s) | 1318, 1327, 1871, 2203, 2224, 2272 |
| BspDI | ATCGAT | 1 cut(s) | 137 |
| BspFNI | CGCG | 1 cut(s) | 173 |
| BspHI | TCATGA | 1 cut(s) | 1486 |
| BspLI | GGNNCC | 5 cut(s) | 404, 1479, 1789, 1989, 2185 |
| BspPI | GGATC | 1 cut(s) | 954 |
| BspT107I | GGYRCC | 2 cut(s) | 402, 1987 |
| BspTNI | GGTCTC | 3 cut(s) | 839, 1553, 1693 |
| BsrDI | GCAATG | 4 cut(s) | 442, 783, 971, 2331 |
| BsrI | ACTGG | 5 cut(s) | 236, 284, 1112, 1789, 2342 |
| BssECI | CCNNGG | 5 cut(s) | 171, 368, 424, 1563, 2250 |
| BssMI | GATC | 4 cut(s) | 946, 1315, 1414, 2351 |
| BssNI | GRCGYC | 1 cut(s) | 403 |
| BssT1I | CCWWGG | 3 cut(s) | 424, 1563, 2250 |
| Bst2UI | CCWGG | 2 cut(s) | 842, 1359 |
| Bst4CI | ACNGT | 2 cut(s) | 1168, 2377 |
| Bst6I | CTCTTC | 3 cut(s) | 741, 1242, 2251 |
| BstACI | GRCGYC | 1 cut(s) | 403 |
| BstDSI | CCRYGG | 3 cut(s) | 171, 1563, 2250 |
| BstF5I | GGATG | 5 cut(s) | 664, 685, 1351, 1573, 1929 |
| BstFNI | CGCG | 1 cut(s) | 173 |
| BstH2I | RGCGCY | 1 cut(s) | 406 |
| BstHHI | GCGC | 1 cut(s) | 405 |
| BstKTI | GATC | 4 cut(s) | 949, 1318, 1417, 2354 |
| BstMAI | GTCTC | 4 cut(s) | 839, 1553, 1693, 1717 |
| BstMBI | GATC | 4 cut(s) | 946, 1315, 1414, 2351 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 43, 182, 1208, 2364 |
| BstNI | CCWGG | 2 cut(s) | 842, 1359 |
| BstNSI | RCATGY | 2 cut(s) | 157, 1178 |
| BstSCI | CCNGG | 2 cut(s) | 840, 1357 |
| BstSFI | CTRYAG | 2 cut(s) | 1035, 1167 |
| BstUI | CGCG | 1 cut(s) | 173 |
| BstV1I | GCAGC | 3 cut(s) | 2046, 2164, 2379 |
| BstV2I | GAAGAC | 3 cut(s) | 21, 321, 1926 |
| Bsu15I | ATCGAT | 1 cut(s) | 137 |
| BsuRI | GGCC | 5 cut(s) | 266, 337, 373, 423, 1584 |
| BsuTUI | ATCGAT | 1 cut(s) | 137 |
| BtgI | CCRYGG | 3 cut(s) | 171, 1563, 2250 |
| BtsCI | GGATG | 5 cut(s) | 664, 685, 1351, 1573, 1929 |
| BtsI | GCAGTG | 2 cut(s) | 478, 1479 |
| BtsIMutI | CAGTG | 4 cut(s) | 478, 1105, 1479, 2349 |
| CciI | TCATGA | 1 cut(s) | 1486 |
| CfoI | GCGC | 1 cut(s) | 405 |
| Cfr42I | CCGCGG | 1 cut(s) | 174 |
| ClaI | ATCGAT | 1 cut(s) | 137 |
| CseI | GACGC | 1 cut(s) | 1232 |
| Csp6I | GTAC | 1 cut(s) | 874 |
| CviQI | GTAC | 1 cut(s) | 874 |
| DinI | GGCGCC | 1 cut(s) | 404 |
| DpnI | GATC | 4 cut(s) | 948, 1317, 1416, 2353 |
| DpnII | GATC | 4 cut(s) | 946, 1315, 1414, 2351 |
| Eam1104I | CTCTTC | 3 cut(s) | 741, 1242, 2251 |
| EarI | CTCTTC | 3 cut(s) | 741, 1242, 2251 |
| Ecl136II | GAGCTC | 1 cut(s) | 2242 |
| Eco130I | CCWWGG | 3 cut(s) | 424, 1563, 2250 |
| Eco147I | AGGCCT | 3 cut(s) | 337, 373, 1584 |
| Eco24I | GRGCYC | 1 cut(s) | 2244 |
| Eco31I | GGTCTC | 3 cut(s) | 839, 1553, 1693 |
| Eco53kI | GAGCTC | 1 cut(s) | 2242 |
| Eco57I | CTGAAG | 2 cut(s) | 1233, 1260 |
| EcoICRI | GAGCTC | 1 cut(s) | 2242 |
| EcoRI | GAATTC | 1 cut(s) | 1330 |
| EcoRII | CCWGG | 2 cut(s) | 840, 1357 |
| EcoT14I | CCWWGG | 3 cut(s) | 424, 1563, 2250 |
| EcoT38I | GRGCYC | 1 cut(s) | 2244 |
| EgeI | GGCGCC | 1 cut(s) | 404 |
| EheI | GGCGCC | 1 cut(s) | 404 |
| ErhI | CCWWGG | 3 cut(s) | 424, 1563, 2250 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1210, 1242, 1912, 1944, 2191, 2223, 2260, 2292 |
| FaqI | GGGAC | 3 cut(s) | 142, 1895, 2368 |
| FauI | CCCGC | 1 cut(s) | 58 |
| Fnu4HI | GCNGC | 4 cut(s) | 174, 2035, 2153, 2368 |
| FokI | GGATG | 5 cut(s) | 671, 692, 1358, 1580, 1936 |
| FriOI | GRGCYC | 1 cut(s) | 2244 |
| Fsp4HI | GCNGC | 4 cut(s) | 174, 2035, 2153, 2368 |
| FspBI | CTAG | 7 cut(s) | 425, 498, 531, 806, 1289, 1427, 1527 |
| GlaI | GCGC | 1 cut(s) | 404 |
| GluI | GCNGC | 4 cut(s) | 174, 2035, 2153, 2368 |
| GsaI | CCCAGC | 1 cut(s) | 2009 |
| GsuI | CTGGAG | 2 cut(s) | 267, 1129 |
| HaeII | RGCGCY | 1 cut(s) | 406 |
| HaeIII | GGCC | 5 cut(s) | 266, 337, 373, 423, 1584 |
| HgaI | GACGC | 1 cut(s) | 1232 |
| HhaI | GCGC | 1 cut(s) | 405 |
| Hin1I | GRCGYC | 1 cut(s) | 403 |
| Hin6I | GCGC | 1 cut(s) | 403 |
| HinP1I | GCGC | 1 cut(s) | 403 |
| HincII | GTYRAC | 1 cut(s) | 1117 |
| HindII | GTYRAC | 1 cut(s) | 1117 |
| HphI | GGTGA | 7 cut(s) | 224, 626, 1286, 1604, 1783, 2021, 2090 |
| Hpy166II | GTNNAC | 2 cut(s) | 1117, 1906 |
| Hpy188III | TCNNGA | 5 cut(s) | 195, 1070, 1487, 1608, 2293 |
| Hpy8I | GTNNAC | 2 cut(s) | 1117, 1906 |
| Hpy99I | CGWCG | 1 cut(s) | 590 |
| HpyCH4III | ACNGT | 2 cut(s) | 1168, 2377 |
| HpyCH4V | TGCA | 8 cut(s) | 71, 440, 620, 1422, 1472, 1709, 1838, 2336 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 43, 182, 1208, 2364 |
| Hsp92I | GRCGYC | 1 cut(s) | 403 |
| HspAI | GCGC | 1 cut(s) | 403 |
| KasI | GGCGCC | 1 cut(s) | 402 |
| KspI | CCGCGG | 1 cut(s) | 174 |
| Kzo9I | GATC | 4 cut(s) | 946, 1315, 1414, 2351 |
| LmnI | GCTCC | 4 cut(s) | 1477, 1610, 1633, 2121 |
| Lsp1109I | GCAGC | 3 cut(s) | 2046, 2164, 2379 |
| LweI | GCATC | 4 cut(s) | 80, 607, 1211, 1426 |
| MaeI | CTAG | 7 cut(s) | 425, 498, 531, 806, 1289, 1427, 1527 |
| MaeIII | GTNAC | 2 cut(s) | 520, 1220 |
| MalI | GATC | 4 cut(s) | 948, 1317, 1416, 2353 |
| MboI | GATC | 4 cut(s) | 946, 1315, 1414, 2351 |
| MfeI | CAATTG | 1 cut(s) | 101 |
| MhlI | GDGCHC | 1 cut(s) | 2244 |
| Mly113I | GGCGCC | 1 cut(s) | 403 |
| MlyI | GAGTC | 4 cut(s) | 469, 993, 1850, 2243 |
| MmeI | TCCRAC | 2 cut(s) | 1893, 2002 |
| MseI | TTAA | 5 cut(s) | 275, 606, 627, 1128, 1383 |
| MspA1I | CMGCKG | 1 cut(s) | 173 |
| MspR9I | CCNGG | 2 cut(s) | 842, 1359 |
| MunI | CAATTG | 1 cut(s) | 101 |
| MvaI | CCWGG | 2 cut(s) | 842, 1359 |
| MvnI | CGCG | 1 cut(s) | 173 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 43, 182, 1208, 2364 |
| NarI | GGCGCC | 1 cut(s) | 403 |
| NcoI | CCATGG | 2 cut(s) | 1563, 2250 |
| NdeII | GATC | 4 cut(s) | 946, 1315, 1414, 2351 |
| NlaIV | GGNNCC | 5 cut(s) | 404, 1479, 1789, 1989, 2185 |
| NmuCI | GTSAC | 1 cut(s) | 1220 |
| NspI | RCATGY | 2 cut(s) | 157, 1178 |
| PagI | TCATGA | 1 cut(s) | 1486 |
| PceI | AGGCCT | 3 cut(s) | 337, 373, 1584 |
| PciI | ACATGT | 1 cut(s) | 153 |
| PfeI | GAWTC | 7 cut(s) | 415, 485, 908, 1370, 1763, 1798, 2361 |
| PkrI | GCNGC | 4 cut(s) | 175, 2036, 2154, 2369 |
| PleI | GAGTC | 4 cut(s) | 468, 992, 1850, 2242 |
| PluTI | GGCGCC | 1 cut(s) | 406 |
| PpsI | GAGTC | 4 cut(s) | 468, 992, 1850, 2242 |
| PscI | ACATGT | 1 cut(s) | 153 |
| Psp124BI | GAGCTC | 1 cut(s) | 2244 |
| Psp6I | CCWGG | 2 cut(s) | 840, 1357 |
| PspFI | CCCAGC | 1 cut(s) | 2005 |
| PspGI | CCWGG | 2 cut(s) | 840, 1357 |
| PspN4I | GGNNCC | 5 cut(s) | 404, 1479, 1789, 1989, 2185 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 460, 492 |
| RsaI | GTAC | 1 cut(s) | 875 |
| RsaNI | GTAC | 1 cut(s) | 874 |
| SacI | GAGCTC | 1 cut(s) | 2244 |
| SacII | CCGCGG | 1 cut(s) | 174 |
| SaqAI | TTAA | 5 cut(s) | 275, 606, 627, 1128, 1383 |
| SatI | GCNGC | 4 cut(s) | 174, 2035, 2153, 2368 |
| Sau3AI | GATC | 4 cut(s) | 946, 1315, 1414, 2351 |
| SchI | GAGTC | 4 cut(s) | 469, 993, 1850, 2243 |
| ScrFI | CCNGG | 2 cut(s) | 842, 1359 |
| SduI | GDGCHC | 1 cut(s) | 2244 |
| SfaNI | GCATC | 4 cut(s) | 80, 607, 1211, 1426 |
| SfcI | CTRYAG | 2 cut(s) | 1035, 1167 |
| SfoI | GGCGCC | 1 cut(s) | 404 |
| Sfr303I | CCGCGG | 1 cut(s) | 174 |
| SgrBI | CCGCGG | 1 cut(s) | 174 |
| SmlI | CTYRAG | 2 cut(s) | 877, 1735 |
| SmoI | CTYRAG | 2 cut(s) | 877, 1735 |
| SseBI | AGGCCT | 3 cut(s) | 337, 373, 1584 |
| SsiI | CCGC | 4 cut(s) | 51, 171, 173, 2365 |
| SspDI | GGCGCC | 1 cut(s) | 402 |
| SspI | AATATT | 1 cut(s) | 1695 |
| SspMI | CTAG | 7 cut(s) | 425, 498, 531, 806, 1289, 1427, 1527 |
| SstI | GAGCTC | 1 cut(s) | 2244 |
| StuI | AGGCCT | 3 cut(s) | 337, 373, 1584 |
| StyD4I | CCNGG | 2 cut(s) | 840, 1357 |
| StyI | CCWWGG | 3 cut(s) | 424, 1563, 2250 |
| TaaI | ACNGT | 2 cut(s) | 1168, 2377 |
| TaqI | TCGA | 3 cut(s) | 137, 924, 1318 |
| TauI | GCSGC | 1 cut(s) | 176 |
| TfiI | GAWTC | 7 cut(s) | 415, 485, 908, 1370, 1763, 1798, 2361 |
| Tru1I | TTAA | 5 cut(s) | 275, 606, 627, 1128, 1383 |
| Tru9I | TTAA | 5 cut(s) | 275, 606, 627, 1128, 1383 |
| TscAI | CASTG | 4 cut(s) | 478, 1112, 1479, 2349 |
| TseFI | GTSAC | 1 cut(s) | 1220 |
| TseI | GCWGC | 3 cut(s) | 2034, 2152, 2367 |
| Tsp45I | GTSAC | 1 cut(s) | 1220 |
| TspRI | CASTG | 4 cut(s) | 478, 1112, 1479, 2349 |
| XapI | RAATTY | 5 cut(s) | 313, 1156, 1330, 1544, 1595 |
| XceI | RCATGY | 2 cut(s) | 157, 1178 |
| XmaJI | CCTAGG | 1 cut(s) | 424 |
| XspI | CTAG | 7 cut(s) | 425, 498, 531, 806, 1289, 1427, 1527 |