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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1201700.v1.1 MD09G1201800.v1.1 MD17G1181700.v1.1 |
| prunus_persica | Prupe.3G057400_v2.0.a1 |
| pyrus_communis | pycom09g11850 pycom09g11860 pycom17g19140 |
| rosa_chinensis | RchiOBHm_Chr2g0140801 RchiOBHm_Chr2g0140811 |
| rosa_laevigata | RLG00000019898 |
| rosa_multiflora | Rmu_sc0003342.1_g000039 |
| rosa_roxburghii | Rroxscaffold_2G00104490 |
| rosa_rugosa | Rorug02G0365300 |
| rosa_samantha | Rh2AG416600 Rh2BG426200 Rh2CG402800 Rh2DG436100 |
| rosa_wichuraiana | Rw2G034080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 480, 1957 |
| AciI | CCGC | 1 cut(s) | 243 |
| AclWI | GGATC | 1 cut(s) | 1032 |
| AcsI | RAATTY | 4 cut(s) | 1234, 1411, 1625, 2331 |
| AcuI | CTGAAG | 2 cut(s) | 1311, 1338 |
| AcyI | GRCGYC | 1 cut(s) | 481 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1954, 2316 |
| AflII | CTTAAG | 1 cut(s) | 1705 |
| AflIII | ACRYGT | 1 cut(s) | 225 |
| AjnI | CCWGG | 2 cut(s) | 918, 1438 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1110, 1142 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1122, 1154 |
| AluBI | AGCT | 8 cut(s) | 248, 625, 1126, 1289, 1304, 2007, 2172, 2241 |
| AluI | AGCT | 8 cut(s) | 248, 625, 1126, 1289, 1304, 2007, 2172, 2241 |
| Alw26I | GTCTC | 3 cut(s) | 917, 1634, 1687 |
| AlwI | GGATC | 1 cut(s) | 1032 |
| AoxI | GGCC | 5 cut(s) | 336, 413, 449, 499, 1663 |
| ApeKI | GCWGC | 4 cut(s) | 245, 2004, 2122, 2337 |
| ApoI | RAATTY | 4 cut(s) | 1234, 1411, 1625, 2331 |
| AspA2I | CCTAGG | 1 cut(s) | 502 |
| AspLEI | GCGC | 1 cut(s) | 483 |
| AsuHPI | GGTGA | 6 cut(s) | 296, 704, 1364, 1753, 1991, 2060 |
| AvrII | CCTAGG | 1 cut(s) | 502 |
| BanI | GGYRCC | 2 cut(s) | 480, 1957 |
| BbsI | GAAGAC | 3 cut(s) | 21, 399, 1896 |
| BbvI | GCAGC | 4 cut(s) | 257, 2016, 2134, 2349 |
| BccI | CCATC | 6 cut(s) | 73, 524, 668, 773, 1483, 1612 |
| BceAI | ACGGC | 2 cut(s) | 468, 2110 |
| BciT130I | CCWGG | 2 cut(s) | 920, 1440 |
| BciVI | GTATCC | 1 cut(s) | 2218 |
| BclI | TGATCA | 1 cut(s) | 1396 |
| BcoDI | GTCTC | 3 cut(s) | 917, 1634, 1687 |
| BfaI | CTAG | 6 cut(s) | 503, 576, 609, 1367, 1508, 1608 |
| BfmI | CTRYAG | 2 cut(s) | 1113, 1245 |
| BfoI | RGCGCY | 1 cut(s) | 484 |
| BfrI | CTTAAG | 1 cut(s) | 1705 |
| BfuI | GTATCC | 1 cut(s) | 2218 |
| BisI | GCNGC | 4 cut(s) | 246, 2005, 2123, 2338 |
| BlnI | CCTAGG | 1 cut(s) | 502 |
| BlsI | GCNGC | 4 cut(s) | 247, 2006, 2124, 2339 |
| Bme1390I | CCNGG | 2 cut(s) | 920, 1440 |
| BmiI | GGNNCC | 5 cut(s) | 482, 1560, 1759, 1959, 2155 |
| BmrFI | CCNGG | 2 cut(s) | 920, 1440 |
| BmrI | ACTGGG | 1 cut(s) | 419 |
| BmsI | GCATC | 4 cut(s) | 80, 685, 1289, 1507 |
| BmuI | ACTGGG | 1 cut(s) | 419 |
| BpiI | GAAGAC | 3 cut(s) | 21, 399, 1896 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2083, 2115 |
| BpmI | CTGGAG | 3 cut(s) | 339, 1207, 1422 |
| Bsa29I | ATCGAT | 1 cut(s) | 209 |
| BsaHI | GRCGYC | 1 cut(s) | 481 |
| BsaI | GGTCTC | 2 cut(s) | 917, 1634 |
| BsaJI | CCNNGG | 5 cut(s) | 108, 446, 502, 1644, 2220 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1954, 2316 |
| Bse1I | ACTGG | 4 cut(s) | 356, 425, 1190, 1759 |
| Bse3DI | GCAATG | 3 cut(s) | 520, 1049, 2301 |
| BseBI | CCWGG | 2 cut(s) | 920, 1440 |
| BseCI | ATCGAT | 1 cut(s) | 209 |
| BseDI | CCNNGG | 5 cut(s) | 108, 446, 502, 1644, 2220 |
| BseGI | GGATG | 6 cut(s) | 403, 742, 763, 1432, 1654, 1899 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1954, 2316 |
| BseMI | GCAATG | 3 cut(s) | 520, 1049, 2301 |
| BseMII | CTCAG | 7 cut(s) | 1398, 1407, 1842, 2172, 2193, 2241, 2306 |
| BseNI | ACTGG | 4 cut(s) | 356, 425, 1190, 1759 |
| BseRI | GAGGAG | 8 cut(s) | 659, 827, 959, 973, 1074, 1106, 1214, 1571 |
| BseXI | GCAGC | 4 cut(s) | 257, 2016, 2134, 2349 |
| BseYI | CCCAGC | 1 cut(s) | 1975 |
| BshFI | GGCC | 5 cut(s) | 338, 415, 451, 501, 1665 |
| BshNI | GGYRCC | 2 cut(s) | 480, 1957 |
| BshVI | ATCGAT | 1 cut(s) | 209 |
| BslFI | GGGAC | 3 cut(s) | 214, 1865, 2338 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1954, 2316 |
| BsmAI | GTCTC | 3 cut(s) | 917, 1634, 1687 |
| BsmFI | GGGAC | 3 cut(s) | 214, 1865, 2338 |
| BsmI | GAATGC | 1 cut(s) | 1603 |
| BsnI | GGCC | 5 cut(s) | 338, 415, 451, 501, 1665 |
| Bso31I | GGTCTC | 2 cut(s) | 917, 1634 |
| Bsp143I | GATC | 4 cut(s) | 1024, 1396, 1495, 2321 |
| Bsp19I | CCATGG | 2 cut(s) | 1644, 2220 |
| BspACI | CCGC | 1 cut(s) | 243 |
| BspANI | GGCC | 5 cut(s) | 338, 415, 451, 501, 1665 |
| BspCNI | CTCAG | 7 cut(s) | 1399, 1408, 1841, 2173, 2194, 2242, 2307 |
| BspDI | ATCGAT | 1 cut(s) | 209 |
| BspHI | TCATGA | 1 cut(s) | 1567 |
| BspLI | GGNNCC | 5 cut(s) | 482, 1560, 1759, 1959, 2155 |
| BspPI | GGATC | 1 cut(s) | 1032 |
| BspT107I | GGYRCC | 2 cut(s) | 480, 1957 |
| BspTI | CTTAAG | 1 cut(s) | 1705 |
| BspTNI | GGTCTC | 2 cut(s) | 917, 1634 |
| BsrDI | GCAATG | 3 cut(s) | 520, 1049, 2301 |
| BsrI | ACTGG | 4 cut(s) | 356, 425, 1190, 1759 |
| BssECI | CCNNGG | 5 cut(s) | 108, 446, 502, 1644, 2220 |
| BssMI | GATC | 4 cut(s) | 1024, 1396, 1495, 2321 |
| BssNI | GRCGYC | 1 cut(s) | 481 |
| BssT1I | CCWWGG | 4 cut(s) | 108, 502, 1644, 2220 |
| Bst2UI | CCWGG | 2 cut(s) | 920, 1440 |
| Bst4CI | ACNGT | 3 cut(s) | 130, 1246, 2347 |
| Bst6I | CTCTTC | 4 cut(s) | 819, 1320, 1380, 2221 |
| BstACI | GRCGYC | 1 cut(s) | 481 |
| BstAFI | CTTAAG | 1 cut(s) | 1705 |
| BstDSI | CCRYGG | 2 cut(s) | 1644, 2220 |
| BstF5I | GGATG | 6 cut(s) | 403, 742, 763, 1432, 1654, 1899 |
| BstH2I | RGCGCY | 1 cut(s) | 484 |
| BstHHI | GCGC | 1 cut(s) | 483 |
| BstKTI | GATC | 4 cut(s) | 1027, 1399, 1498, 2324 |
| BstMAI | GTCTC | 3 cut(s) | 917, 1634, 1687 |
| BstMBI | GATC | 4 cut(s) | 1024, 1396, 1495, 2321 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 43, 254, 1286, 1526, 2334 |
| BstNI | CCWGG | 2 cut(s) | 920, 1440 |
| BstNSI | RCATGY | 2 cut(s) | 229, 1256 |
| BstSCI | CCNGG | 2 cut(s) | 918, 1438 |
| BstSFI | CTRYAG | 2 cut(s) | 1113, 1245 |
| BstV1I | GCAGC | 4 cut(s) | 257, 2016, 2134, 2349 |
| BstV2I | GAAGAC | 3 cut(s) | 21, 399, 1896 |
| Bsu15I | ATCGAT | 1 cut(s) | 209 |
| BsuI | GTATCC | 1 cut(s) | 2218 |
| BsuRI | GGCC | 5 cut(s) | 338, 415, 451, 501, 1665 |
| BsuTUI | ATCGAT | 1 cut(s) | 209 |
| BtgI | CCRYGG | 2 cut(s) | 1644, 2220 |
| BtsCI | GGATG | 6 cut(s) | 403, 742, 763, 1432, 1654, 1899 |
| BtsI | GCAGTG | 1 cut(s) | 556 |
| BtsIMutI | CAGTG | 3 cut(s) | 556, 1183, 2312 |
| CciI | TCATGA | 1 cut(s) | 1567 |
| CfoI | GCGC | 1 cut(s) | 483 |
| ClaI | ATCGAT | 1 cut(s) | 209 |
| DinI | GGCGCC | 1 cut(s) | 482 |
| DpnI | GATC | 4 cut(s) | 1026, 1398, 1497, 2323 |
| DpnII | GATC | 4 cut(s) | 1024, 1396, 1495, 2321 |
| DraI | TTTAAA | 2 cut(s) | 102, 1888 |
| Eam1104I | CTCTTC | 4 cut(s) | 819, 1320, 1380, 2221 |
| EarI | CTCTTC | 4 cut(s) | 819, 1320, 1380, 2221 |
| Eco130I | CCWWGG | 4 cut(s) | 108, 502, 1644, 2220 |
| Eco147I | AGGCCT | 3 cut(s) | 415, 451, 1665 |
| Eco31I | GGTCTC | 2 cut(s) | 917, 1634 |
| Eco57I | CTGAAG | 2 cut(s) | 1311, 1338 |
| EcoRI | GAATTC | 2 cut(s) | 1411, 2331 |
| EcoRII | CCWGG | 2 cut(s) | 918, 1438 |
| EcoT14I | CCWWGG | 4 cut(s) | 108, 502, 1644, 2220 |
| EgeI | GGCGCC | 1 cut(s) | 482 |
| EheI | GGCGCC | 1 cut(s) | 482 |
| ErhI | CCWWGG | 4 cut(s) | 108, 502, 1644, 2220 |
| FaqI | GGGAC | 3 cut(s) | 214, 1865, 2338 |
| FbaI | TGATCA | 1 cut(s) | 1396 |
| Fnu4HI | GCNGC | 4 cut(s) | 246, 2005, 2123, 2338 |
| FokI | GGATG | 6 cut(s) | 410, 749, 770, 1439, 1661, 1906 |
| Fsp4HI | GCNGC | 4 cut(s) | 246, 2005, 2123, 2338 |
| FspBI | CTAG | 6 cut(s) | 503, 576, 609, 1367, 1508, 1608 |
| GlaI | GCGC | 1 cut(s) | 482 |
| GluI | GCNGC | 4 cut(s) | 246, 2005, 2123, 2338 |
| GsaI | CCCAGC | 1 cut(s) | 1979 |
| GsuI | CTGGAG | 3 cut(s) | 339, 1207, 1422 |
| HaeII | RGCGCY | 1 cut(s) | 484 |
| HaeIII | GGCC | 5 cut(s) | 338, 415, 451, 501, 1665 |
| HhaI | GCGC | 1 cut(s) | 483 |
| Hin1I | GRCGYC | 1 cut(s) | 481 |
| Hin6I | GCGC | 1 cut(s) | 481 |
| HinP1I | GCGC | 1 cut(s) | 481 |
| HindIII | AAGCTT | 1 cut(s) | 1302 |
| HphI | GGTGA | 6 cut(s) | 296, 704, 1364, 1753, 1991, 2060 |
| Hpy166II | GTNNAC | 1 cut(s) | 1876 |
| Hpy188III | TCNNGA | 6 cut(s) | 123, 267, 1001, 1148, 1568, 2263 |
| Hpy8I | GTNNAC | 1 cut(s) | 1876 |
| HpyCH4III | ACNGT | 3 cut(s) | 130, 1246, 2347 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 43, 254, 1286, 1526, 2334 |
| Hsp92I | GRCGYC | 1 cut(s) | 481 |
| HspAI | GCGC | 1 cut(s) | 481 |
| KasI | GGCGCC | 1 cut(s) | 480 |
| Ksp22I | TGATCA | 1 cut(s) | 1396 |
| Kzo9I | GATC | 4 cut(s) | 1024, 1396, 1495, 2321 |
| LmnI | GCTCC | 2 cut(s) | 1558, 2091 |
| Lsp1109I | GCAGC | 4 cut(s) | 257, 2016, 2134, 2349 |
| LweI | GCATC | 4 cut(s) | 80, 685, 1289, 1507 |
| MaeI | CTAG | 6 cut(s) | 503, 576, 609, 1367, 1508, 1608 |
| MaeIII | GTNAC | 5 cut(s) | 374, 427, 598, 1401, 1610 |
| MalI | GATC | 4 cut(s) | 1026, 1398, 1497, 2323 |
| MboI | GATC | 4 cut(s) | 1024, 1396, 1495, 2321 |
| MfeI | CAATTG | 1 cut(s) | 173 |
| Mly113I | GGCGCC | 1 cut(s) | 481 |
| MlyI | GAGTC | 3 cut(s) | 547, 1071, 2213 |
| MmeI | TCCRAC | 2 cut(s) | 1863, 1972 |
| MseI | TTAA | 9 cut(s) | 101, 347, 684, 705, 1052, 1206, 1464, 1706, 1887 |
| MspCI | CTTAAG | 1 cut(s) | 1705 |
| MspR9I | CCNGG | 2 cut(s) | 920, 1440 |
| MunI | CAATTG | 1 cut(s) | 173 |
| Mva1269I | GAATGC | 1 cut(s) | 1603 |
| MvaI | CCWGG | 2 cut(s) | 920, 1440 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 43, 254, 1286, 1526, 2334 |
| NarI | GGCGCC | 1 cut(s) | 481 |
| NcoI | CCATGG | 2 cut(s) | 1644, 2220 |
| NdeII | GATC | 4 cut(s) | 1024, 1396, 1495, 2321 |
| NlaIV | GGNNCC | 5 cut(s) | 482, 1560, 1759, 1959, 2155 |
| NmuCI | GTSAC | 1 cut(s) | 374 |
| NspI | RCATGY | 2 cut(s) | 229, 1256 |
| PagI | TCATGA | 1 cut(s) | 1567 |
| PceI | AGGCCT | 3 cut(s) | 415, 451, 1665 |
| PciI | ACATGT | 1 cut(s) | 225 |
| PctI | GAATGC | 1 cut(s) | 1603 |
| PfeI | GAWTC | 7 cut(s) | 305, 493, 563, 997, 1451, 1733, 1768 |
| PfoI | TCCNGGA | 1 cut(s) | 1438 |
| PkrI | GCNGC | 4 cut(s) | 247, 2006, 2124, 2339 |
| PleI | GAGTC | 3 cut(s) | 546, 1070, 2212 |
| PluTI | GGCGCC | 1 cut(s) | 484 |
| PpsI | GAGTC | 3 cut(s) | 546, 1070, 2212 |
| PscI | ACATGT | 1 cut(s) | 225 |
| Psp6I | CCWGG | 2 cut(s) | 918, 1438 |
| PspFI | CCCAGC | 1 cut(s) | 1975 |
| PspGI | CCWGG | 2 cut(s) | 918, 1438 |
| PspN4I | GGNNCC | 5 cut(s) | 482, 1560, 1759, 1959, 2155 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 538, 570 |
| SaqAI | TTAA | 9 cut(s) | 101, 347, 684, 705, 1052, 1206, 1464, 1706, 1887 |
| SatI | GCNGC | 4 cut(s) | 246, 2005, 2123, 2338 |
| Sau3AI | GATC | 4 cut(s) | 1024, 1396, 1495, 2321 |
| SchI | GAGTC | 3 cut(s) | 547, 1071, 2213 |
| ScrFI | CCNGG | 2 cut(s) | 920, 1440 |
| SfaNI | GCATC | 4 cut(s) | 80, 685, 1289, 1507 |
| SfcI | CTRYAG | 2 cut(s) | 1113, 1245 |
| SfoI | GGCGCC | 1 cut(s) | 482 |
| SmlI | CTYRAG | 1 cut(s) | 1705 |
| SmoI | CTYRAG | 1 cut(s) | 1705 |
| SseBI | AGGCCT | 3 cut(s) | 415, 451, 1665 |
| SsiI | CCGC | 1 cut(s) | 243 |
| SspDI | GGCGCC | 1 cut(s) | 480 |
| SspMI | CTAG | 6 cut(s) | 503, 576, 609, 1367, 1508, 1608 |
| StuI | AGGCCT | 3 cut(s) | 415, 451, 1665 |
| StyD4I | CCNGG | 2 cut(s) | 918, 1438 |
| StyI | CCWWGG | 4 cut(s) | 108, 502, 1644, 2220 |
| TaaI | ACNGT | 3 cut(s) | 130, 1246, 2347 |
| TaqI | TCGA | 2 cut(s) | 209, 1002 |
| TfiI | GAWTC | 7 cut(s) | 305, 493, 563, 997, 1451, 1733, 1768 |
| Tru1I | TTAA | 9 cut(s) | 101, 347, 684, 705, 1052, 1206, 1464, 1706, 1887 |
| Tru9I | TTAA | 9 cut(s) | 101, 347, 684, 705, 1052, 1206, 1464, 1706, 1887 |
| TscAI | CASTG | 3 cut(s) | 556, 1190, 2319 |
| TseFI | GTSAC | 1 cut(s) | 374 |
| TseI | GCWGC | 4 cut(s) | 245, 2004, 2122, 2337 |
| Tsp45I | GTSAC | 1 cut(s) | 374 |
| TspRI | CASTG | 3 cut(s) | 556, 1190, 2319 |
| Vha464I | CTTAAG | 1 cut(s) | 1705 |
| XapI | RAATTY | 4 cut(s) | 1234, 1411, 1625, 2331 |
| XceI | RCATGY | 2 cut(s) | 229, 1256 |
| XmaJI | CCTAGG | 1 cut(s) | 502 |
| XspI | CTAG | 6 cut(s) | 503, 576, 609, 1367, 1508, 1608 |