Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G01690 AT4G01690 |
| fragaria_vesca | FvH4_1g26170 FvH4_1g26170 FvH4_1g26170 |
| malus_domestica | MD09G1291200.v1.1 |
| prunus_persica | Prupe.3G001700_v2.0.a1 Prupe.3G001700_v2.0.a1 |
| pyrus_communis | pycom09g19900 pycom17g28240 |
| rosa_chinensis | RchiOBHm_Chr3g0485661 |
| rosa_laevigata | RLG00000023135 |
| rosa_multiflora | Rmu_sc0004711.1_g000001 Rmu_sc0017693.1_g000001 Rmu_sc0017693.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00396540 Rroxscaffold_6G00396860 |
| rosa_rugosa | Rorug03G0220500 Rorug03G0220500 |
| rosa_samantha | Rh3AG269500 Rh3BG305500 Rh3CG303600 Rh3DG299800 |
| rosa_wichuraiana | Rw3G024020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 776, 1307 |
| AccI | GTMKAC | 1 cut(s) | 146 |
| AccII | CGCG | 3 cut(s) | 20, 603, 832 |
| AclWI | GGATC | 8 cut(s) | 23, 173, 380, 437, 450, 692, 821, 871 |
| AcoI | YGGCCR | 3 cut(s) | 21, 135, 1433 |
| AcsI | RAATTY | 2 cut(s) | 1097, 1323 |
| AcuI | CTGAAG | 1 cut(s) | 1202 |
| AcyI | GRCGYC | 1 cut(s) | 270 |
| AfaI | GTAC | 2 cut(s) | 181, 965 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 306, 596 |
| AgsI | TTSAA | 7 cut(s) | 421, 617, 656, 705, 939, 1294, 1355 |
| AjnI | CCWGG | 7 cut(s) | 11, 299, 595, 792, 1212, 1273, 1318 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 88, 120, 1509, 1541 |
| AluBI | AGCT | 7 cut(s) | 481, 506, 745, 934, 1245, 1348, 1442 |
| AluI | AGCT | 7 cut(s) | 481, 506, 745, 934, 1245, 1348, 1442 |
| Alw21I | GWGCWC | 3 cut(s) | 8, 568, 1270 |
| Alw44I | GTGCAC | 1 cut(s) | 1266 |
| AlwI | GGATC | 8 cut(s) | 23, 173, 380, 437, 450, 692, 821, 871 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 250, 1219 |
| Ama87I | CYCGRG | 1 cut(s) | 822 |
| AoxI | GGCC | 8 cut(s) | 21, 135, 297, 361, 485, 552, 850, 1433 |
| ApaLI | GTGCAC | 1 cut(s) | 1266 |
| ApeKI | GCWGC | 7 cut(s) | 722, 742, 1073, 1076, 1079, 1118, 1484 |
| ApoI | RAATTY | 2 cut(s) | 1097, 1323 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1149 |
| AspA2I | CCTAGG | 1 cut(s) | 455 |
| AspS9I | GGNCC | 6 cut(s) | 304, 362, 486, 552, 850, 1512 |
| AsuC2I | CCSGG | 1 cut(s) | 308 |
| AsuHPI | GGTGA | 5 cut(s) | 50, 319, 388, 707, 1187 |
| AvaI | CYCGRG | 1 cut(s) | 822 |
| AvaII | GGWCC | 2 cut(s) | 304, 1512 |
| AvrII | CCTAGG | 1 cut(s) | 455 |
| BaeGI | GKGCMC | 1 cut(s) | 1270 |
| BalI | TGGCCA | 2 cut(s) | 137, 1435 |
| BamHI | GGATCC | 1 cut(s) | 442 |
| BanI | GGYRCC | 2 cut(s) | 776, 1307 |
| BanII | GRGCYC | 1 cut(s) | 234 |
| BbsI | GAAGAC | 1 cut(s) | 827 |
| Bbv12I | GWGCWC | 3 cut(s) | 8, 568, 1270 |
| BbvCI | CCTCAGC | 2 cut(s) | 482, 1596 |
| BbvI | GCAGC | 7 cut(s) | 734, 754, 1060, 1063, 1066, 1130, 1471 |
| BccI | CCATC | 5 cut(s) | 397, 467, 1042, 1166, 1330 |
| BceAI | ACGGC | 6 cut(s) | 142, 257, 280, 358, 364, 478 |
| BciT130I | CCWGG | 7 cut(s) | 13, 301, 597, 794, 1214, 1275, 1320 |
| BclI | TGATCA | 1 cut(s) | 1363 |
| BcnI | CCSGG | 1 cut(s) | 308 |
| BfaI | CTAG | 2 cut(s) | 456, 746 |
| BfmI | CTRYAG | 1 cut(s) | 1080 |
| BglII | AGATCT | 1 cut(s) | 1369 |
| BlnI | CCTAGG | 1 cut(s) | 455 |
| Bme1390I | CCNGG | 8 cut(s) | 13, 301, 308, 597, 794, 1214, 1275, 1320 |
| Bme18I | GGWCC | 2 cut(s) | 304, 1512 |
| BmeT110I | CYCGRG | 1 cut(s) | 822 |
| BmgT120I | GGNCC | 6 cut(s) | 304, 362, 486, 552, 850, 1512 |
| BmiI | GGNNCC | 8 cut(s) | 305, 364, 444, 778, 1309, 1407, 1513, 1514 |
| BmrFI | CCNGG | 8 cut(s) | 13, 301, 308, 597, 794, 1214, 1275, 1320 |
| BmrI | ACTGGG | 1 cut(s) | 1518 |
| BmsI | GCATC | 6 cut(s) | 116, 543, 886, 1075, 1210, 1471 |
| BmuI | ACTGGG | 1 cut(s) | 1518 |
| BpiI | GAAGAC | 1 cut(s) | 827 |
| BpmI | CTGGAG | 1 cut(s) | 579 |
| Bpu10I | CCTNAGC | 4 cut(s) | 243, 482, 1401, 1596 |
| BpuMI | CCSGG | 1 cut(s) | 308 |
| BsaBI | GATNNNNATC | 2 cut(s) | 533, 1368 |
| BsaHI | GRCGYC | 1 cut(s) | 270 |
| BsaJI | CCNNGG | 6 cut(s) | 300, 455, 793, 1213, 1516, 1557 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 306, 596 |
| Bse118I | RCCGGY | 1 cut(s) | 1493 |
| Bse1I | ACTGG | 3 cut(s) | 1112, 1513, 1552 |
| Bse8I | GATNNNNATC | 2 cut(s) | 533, 1368 |
| BseBI | CCWGG | 7 cut(s) | 13, 301, 597, 794, 1214, 1275, 1320 |
| BseDI | CCNNGG | 6 cut(s) | 300, 455, 793, 1213, 1516, 1557 |
| BseGI | GGATG | 5 cut(s) | 430, 478, 901, 1034, 1201 |
| BseJI | GATNNNNATC | 2 cut(s) | 533, 1368 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 306, 596 |
| BseMII | CTCAG | 8 cut(s) | 41, 257, 473, 562, 701, 998, 1364, 1587 |
| BseNI | ACTGG | 3 cut(s) | 1112, 1513, 1552 |
| BseRI | GAGGAG | 1 cut(s) | 582 |
| BseSI | GKGCMC | 1 cut(s) | 1270 |
| BseXI | GCAGC | 7 cut(s) | 734, 754, 1060, 1063, 1066, 1130, 1471 |
| BseYI | CCCAGC | 1 cut(s) | 502 |
| BsgI | GTGCAG | 1 cut(s) | 30 |
| Bsh1236I | CGCG | 3 cut(s) | 20, 603, 832 |
| BshFI | GGCC | 8 cut(s) | 23, 137, 299, 363, 487, 554, 852, 1435 |
| BshNI | GGYRCC | 2 cut(s) | 776, 1307 |
| BsiHKAI | GWGCWC | 3 cut(s) | 8, 568, 1270 |
| BsiHKCI | CYCGRG | 1 cut(s) | 822 |
| BsiSI | CCGG | 3 cut(s) | 307, 893, 1494 |
| BslFI | GGGAC | 4 cut(s) | 260, 317, 891, 1525 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 306, 596 |
| BsmFI | GGGAC | 4 cut(s) | 260, 317, 891, 1525 |
| BsmI | GAATGC | 2 cut(s) | 573, 725 |
| BsnI | GGCC | 8 cut(s) | 23, 137, 299, 363, 487, 554, 852, 1435 |
| BsoBI | CYCGRG | 1 cut(s) | 822 |
| Bsp1286I | GDGCHC | 4 cut(s) | 8, 234, 568, 1270 |
| Bsp68I | TCGCGA | 1 cut(s) | 603 |
| BspANI | GGCC | 8 cut(s) | 23, 137, 299, 363, 487, 554, 852, 1435 |
| BspCNI | CTCAG | 8 cut(s) | 40, 256, 474, 561, 702, 999, 1365, 1588 |
| BspFNI | CGCG | 3 cut(s) | 20, 603, 832 |
| BspLI | GGNNCC | 8 cut(s) | 305, 364, 444, 778, 1309, 1407, 1513, 1514 |
| BspMAI | CTGCAG | 1 cut(s) | 1084 |
| BspPI | GGATC | 8 cut(s) | 23, 173, 380, 437, 450, 692, 821, 871 |
| BspT107I | GGYRCC | 2 cut(s) | 776, 1307 |
| BsrFI | RCCGGY | 1 cut(s) | 1493 |
| BsrI | ACTGG | 3 cut(s) | 1112, 1513, 1552 |
| BssAI | RCCGGY | 1 cut(s) | 1493 |
| BssECI | CCNNGG | 6 cut(s) | 300, 455, 793, 1213, 1516, 1557 |
| BssNI | GRCGYC | 1 cut(s) | 270 |
| BssT1I | CCWWGG | 3 cut(s) | 455, 1516, 1557 |
| Bst2UI | CCWGG | 7 cut(s) | 13, 301, 597, 794, 1214, 1275, 1320 |
| Bst4CI | ACNGT | 8 cut(s) | 56, 186, 331, 413, 859, 1030, 1394, 1452 |
| Bst6I | CTCTTC | 2 cut(s) | 41, 612 |
| BstACI | GRCGYC | 1 cut(s) | 270 |
| BstC8I | GCNNGC | 3 cut(s) | 252, 479, 1346 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 594 |
| BstF5I | GGATG | 5 cut(s) | 430, 478, 901, 1034, 1201 |
| BstFNI | CGCG | 3 cut(s) | 20, 603, 832 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 17, 540, 563, 748, 785, 1079, 1085, 1490, 1601 |
| BstNI | CCWGG | 7 cut(s) | 13, 301, 597, 794, 1214, 1275, 1320 |
| BstSCI | CCNGG | 8 cut(s) | 11, 299, 306, 595, 792, 1212, 1273, 1318 |
| BstSFI | CTRYAG | 1 cut(s) | 1080 |
| BstSLI | GKGCMC | 1 cut(s) | 1270 |
| BstUI | CGCG | 3 cut(s) | 20, 603, 832 |
| BstV1I | GCAGC | 7 cut(s) | 734, 754, 1060, 1063, 1066, 1130, 1471 |
| BstV2I | GAAGAC | 1 cut(s) | 827 |
| BstX2I | RGATCY | 4 cut(s) | 442, 826, 863, 1369 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 79, 406, 860 |
| BstYI | RGATCY | 4 cut(s) | 442, 826, 863, 1369 |
| BsuRI | GGCC | 8 cut(s) | 23, 137, 299, 363, 487, 554, 852, 1435 |
| BtgZI | GCGATG | 2 cut(s) | 139, 657 |
| BtsCI | GGATG | 5 cut(s) | 430, 478, 901, 1034, 1201 |
| BtsIMutI | CAGTG | 3 cut(s) | 52, 232, 1545 |
| BtuMI | TCGCGA | 1 cut(s) | 603 |
| Cac8I | GCNNGC | 3 cut(s) | 252, 479, 1346 |
| CaiI | CAGNNNCTG | 2 cut(s) | 250, 1219 |
| Cfr10I | RCCGGY | 1 cut(s) | 1493 |
| Cfr13I | GGNCC | 6 cut(s) | 304, 362, 486, 552, 850, 1512 |
| CseI | GACGC | 2 cut(s) | 278, 821 |
| Csp6I | GTAC | 2 cut(s) | 180, 964 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1437, 1472 |
| CviAII | CATG | 4 cut(s) | 238, 391, 400, 806 |
| CviQI | GTAC | 2 cut(s) | 180, 964 |
| EaeI | YGGCCR | 3 cut(s) | 21, 135, 1433 |
| Eam1104I | CTCTTC | 2 cut(s) | 41, 612 |
| EarI | CTCTTC | 2 cut(s) | 41, 612 |
| EciI | GGCGGA | 1 cut(s) | 576 |
| Eco130I | CCWWGG | 3 cut(s) | 455, 1516, 1557 |
| Eco24I | GRGCYC | 1 cut(s) | 234 |
| Eco47I | GGWCC | 2 cut(s) | 304, 1512 |
| Eco57I | CTGAAG | 1 cut(s) | 1202 |
| Eco88I | CYCGRG | 1 cut(s) | 822 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 594 |
| EcoO109I | RGGNCCY | 2 cut(s) | 362, 1512 |
| EcoRII | CCWGG | 7 cut(s) | 11, 299, 595, 792, 1212, 1273, 1318 |
| EcoT14I | CCWWGG | 3 cut(s) | 455, 1516, 1557 |
| EcoT38I | GRGCYC | 1 cut(s) | 234 |
| ErhI | CCWWGG | 3 cut(s) | 455, 1516, 1557 |
| FaeI | CATG | 4 cut(s) | 241, 394, 403, 809 |
| FaqI | GGGAC | 4 cut(s) | 260, 317, 891, 1525 |
| FatI | CATG | 4 cut(s) | 237, 390, 399, 805 |
| FauI | CCCGC | 1 cut(s) | 685 |
| FbaI | TGATCA | 1 cut(s) | 1363 |
| FblI | GTMKAC | 1 cut(s) | 146 |
| FokI | GGATG | 5 cut(s) | 437, 485, 908, 1021, 1188 |
| FriOI | GRGCYC | 1 cut(s) | 234 |
| FspBI | CTAG | 2 cut(s) | 456, 746 |
| GsaI | CCCAGC | 1 cut(s) | 506 |
| GsuI | CTGGAG | 1 cut(s) | 579 |
| HaeIII | GGCC | 8 cut(s) | 23, 137, 299, 363, 487, 554, 852, 1435 |
| HapII | CCGG | 3 cut(s) | 307, 893, 1494 |
| HgaI | GACGC | 2 cut(s) | 278, 821 |
| Hin1I | GRCGYC | 1 cut(s) | 270 |
| Hin1II | CATG | 4 cut(s) | 241, 394, 403, 809 |
| HincII | GTYRAC | 3 cut(s) | 147, 199, 1196 |
| HindII | GTYRAC | 3 cut(s) | 147, 199, 1196 |
| HindIII | AAGCTT | 2 cut(s) | 932, 1346 |
| HinfI | GANTC | 5 cut(s) | 86, 143, 222, 608, 802 |
| HpaII | CCGG | 3 cut(s) | 307, 893, 1494 |
| HphI | GGTGA | 5 cut(s) | 50, 319, 388, 707, 1187 |
| Hpy166II | GTNNAC | 8 cut(s) | 147, 182, 199, 409, 966, 1178, 1196, 1268 |
| Hpy188I | TCNGA | 7 cut(s) | 385, 731, 840, 1008, 1155, 1333, 1374 |
| Hpy188III | TCNNGA | 7 cut(s) | 277, 334, 602, 824, 871, 1291, 1367 |
| Hpy8I | GTNNAC | 8 cut(s) | 147, 182, 199, 409, 966, 1178, 1196, 1268 |
| Hpy99I | CGWCG | 4 cut(s) | 163, 272, 335, 633 |
| HpyAV | CCTTC | 9 cut(s) | 331, 353, 415, 591, 711, 868, 983, 1177, 1272 |
| HpyCH4III | ACNGT | 8 cut(s) | 56, 186, 331, 413, 859, 1030, 1394, 1452 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 17, 540, 563, 748, 785, 1079, 1085, 1490, 1601 |
| Hsp92I | GRCGYC | 1 cut(s) | 270 |
| Hsp92II | CATG | 4 cut(s) | 241, 394, 403, 809 |
| KflI | GGGWCCC | 1 cut(s) | 1512 |
| Ksp22I | TGATCA | 1 cut(s) | 1363 |
| LmnI | GCTCC | 1 cut(s) | 1405 |
| Lsp1109I | GCAGC | 7 cut(s) | 734, 754, 1060, 1063, 1066, 1130, 1471 |
| LweI | GCATC | 6 cut(s) | 116, 543, 886, 1075, 1210, 1471 |
| MaeI | CTAG | 2 cut(s) | 456, 746 |
| MaeIII | GTNAC | 3 cut(s) | 56, 289, 1543 |
| MboII | GAAGA | 6 cut(s) | 28, 31, 368, 617, 629, 827 |
| MflI | RGATCY | 4 cut(s) | 442, 826, 863, 1369 |
| MhlI | GDGCHC | 4 cut(s) | 8, 234, 568, 1270 |
| MlsI | TGGCCA | 2 cut(s) | 137, 1435 |
| MluCI | AATT | 8 cut(s) | 663, 900, 920, 950, 1097, 1149, 1323, 1606 |
| MluNI | TGGCCA | 2 cut(s) | 137, 1435 |
| MlyI | GAGTC | 1 cut(s) | 152 |
| MmeI | TCCRAC | 1 cut(s) | 841 |
| Mox20I | TGGCCA | 2 cut(s) | 137, 1435 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1149 |
| MscI | TGGCCA | 2 cut(s) | 137, 1435 |
| MseI | TTAA | 2 cut(s) | 662, 783 |
| MslI | CAYNNNNRTG | 4 cut(s) | 77, 401, 404, 1470 |
| Msp20I | TGGCCA | 2 cut(s) | 137, 1435 |
| MspA1I | CMGCKG | 1 cut(s) | 506 |
| MspI | CCGG | 3 cut(s) | 307, 893, 1494 |
| MspR9I | CCNGG | 8 cut(s) | 13, 301, 308, 597, 794, 1214, 1275, 1320 |
| Mva1269I | GAATGC | 2 cut(s) | 573, 725 |
| MvaI | CCWGG | 7 cut(s) | 13, 301, 597, 794, 1214, 1275, 1320 |
| MvnI | CGCG | 3 cut(s) | 20, 603, 832 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 17, 540, 563, 748, 785, 1079, 1085, 1490, 1601 |
| NciI | CCSGG | 1 cut(s) | 308 |
| NlaIII | CATG | 4 cut(s) | 241, 394, 403, 809 |
| NlaIV | GGNNCC | 8 cut(s) | 305, 364, 444, 778, 1309, 1407, 1513, 1514 |
| NmuCI | GTSAC | 3 cut(s) | 56, 289, 1543 |
| NruI | TCGCGA | 1 cut(s) | 603 |
| PaeR7I | CTCGAG | 1 cut(s) | 822 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 270, 829 |
| PctI | GAATGC | 2 cut(s) | 573, 725 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1149 |
| PfeI | GAWTC | 4 cut(s) | 86, 222, 608, 802 |
| PflFI | GACNNNGTC | 1 cut(s) | 272 |
| PfoI | TCCNGGA | 1 cut(s) | 1318 |
| PleI | GAGTC | 1 cut(s) | 151 |
| PpsI | GAGTC | 1 cut(s) | 151 |
| PpuMI | RGGWCCY | 1 cut(s) | 1512 |
| Psp5II | RGGWCCY | 1 cut(s) | 1512 |
| Psp6I | CCWGG | 7 cut(s) | 11, 299, 595, 792, 1212, 1273, 1318 |
| PspFI | CCCAGC | 1 cut(s) | 502 |
| PspGI | CCWGG | 7 cut(s) | 11, 299, 595, 792, 1212, 1273, 1318 |
| PspN4I | GGNNCC | 8 cut(s) | 305, 364, 444, 778, 1309, 1407, 1513, 1514 |
| PspPI | GGNCC | 6 cut(s) | 304, 362, 486, 552, 850, 1512 |
| PspPPI | RGGWCCY | 1 cut(s) | 1512 |
| PstI | CTGCAG | 1 cut(s) | 1084 |
| PstNI | CAGNNNCTG | 2 cut(s) | 250, 1219 |
| PsuI | RGATCY | 4 cut(s) | 442, 826, 863, 1369 |
| PsyI | GACNNNGTC | 1 cut(s) | 272 |
| PvuII | CAGCTG | 1 cut(s) | 506 |
| RruI | TCGCGA | 1 cut(s) | 603 |
| RsaI | GTAC | 2 cut(s) | 181, 965 |
| RsaNI | GTAC | 2 cut(s) | 180, 964 |
| RseI | CAYNNNNRTG | 4 cut(s) | 77, 401, 404, 1470 |
| SalI | GTCGAC | 1 cut(s) | 145 |
| SaqAI | TTAA | 2 cut(s) | 662, 783 |
| Sau96I | GGNCC | 6 cut(s) | 304, 362, 486, 552, 850, 1512 |
| SchI | GAGTC | 1 cut(s) | 152 |
| ScrFI | CCNGG | 8 cut(s) | 13, 301, 308, 597, 794, 1214, 1275, 1320 |
| SduI | GDGCHC | 4 cut(s) | 8, 234, 568, 1270 |
| SfaNI | GCATC | 6 cut(s) | 116, 543, 886, 1075, 1210, 1471 |
| SfcI | CTRYAG | 1 cut(s) | 1080 |
| Sfr274I | CTCGAG | 1 cut(s) | 822 |
| SinI | GGWCC | 2 cut(s) | 304, 1512 |
| SlaI | CTCGAG | 1 cut(s) | 822 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 77, 401, 404, 1470 |
| SmlI | CTYRAG | 1 cut(s) | 822 |
| SmoI | CTYRAG | 1 cut(s) | 822 |
| Sse9I | AATT | 8 cut(s) | 663, 900, 920, 950, 1097, 1149, 1323, 1606 |
| SspMI | CTAG | 2 cut(s) | 456, 746 |
| StyD4I | CCNGG | 8 cut(s) | 11, 299, 306, 595, 792, 1212, 1273, 1318 |
| StyI | CCWWGG | 3 cut(s) | 455, 1516, 1557 |
| TaaI | ACNGT | 8 cut(s) | 56, 186, 331, 413, 859, 1030, 1394, 1452 |
| TaqI | TCGA | 4 cut(s) | 146, 333, 823, 1564 |
| TasI | AATT | 8 cut(s) | 663, 900, 920, 950, 1097, 1149, 1323, 1606 |
| TauI | GCSGC | 5 cut(s) | 23, 557, 1411, 1536, 1595 |
| TfiI | GAWTC | 4 cut(s) | 86, 222, 608, 802 |
| Tru1I | TTAA | 2 cut(s) | 662, 783 |
| Tru9I | TTAA | 2 cut(s) | 662, 783 |
| TscAI | CASTG | 3 cut(s) | 59, 232, 1552 |
| TseFI | GTSAC | 3 cut(s) | 56, 289, 1543 |
| TseI | GCWGC | 7 cut(s) | 722, 742, 1073, 1076, 1079, 1118, 1484 |
| Tsp45I | GTSAC | 3 cut(s) | 56, 289, 1543 |
| TspDTI | ATGAA | 2 cut(s) | 731, 1122 |
| TspGWI | ACGGA | 1 cut(s) | 308 |
| TspRI | CASTG | 3 cut(s) | 59, 232, 1552 |
| Tth111I | GACNNNGTC | 1 cut(s) | 272 |
| VneI | GTGCAC | 1 cut(s) | 1266 |
| VpaK11BI | GGWCC | 2 cut(s) | 304, 1512 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 594 |
| XapI | RAATTY | 2 cut(s) | 1097, 1323 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 79, 307 |
| XhoI | CTCGAG | 1 cut(s) | 822 |
| XmaJI | CCTAGG | 1 cut(s) | 455 |
| XmiI | GTMKAC | 1 cut(s) | 146 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1149 |
| XspI | CTAG | 2 cut(s) | 456, 746 |