Rmu_sc0017693.1_g000001

Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017693.1
Physical Location & Seq
Forward (+)
1536 .. 5120
3585 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017693.1_g000001.1.cds

Sequence Viewer

Length: 1641 bp
atgaccacactttccaggctcgccgacctcccttccttcgccgcccctccgcctcttctcactcaccgaccacctccctccgtcttcctcactcccaaacctaccaagccctctcctcctcatcacttcttcaaactccgatgctcggtcgccaaacagtccaccgttactccggtagaggtcgccgcagacggcgcgatctcctccgttgactgcgtggtggtcggcggcggaatcagcggactctgcatcgcgcaggcgctggccaccaagcacaacgacgccgttccgaatgtgatagtgacggaggccagagaccgagttggaggcaacatcatcaccgtagagaaggacgggtatctctgggaagaaggccccaatagttttcagccgtccgattccatgctcaccatgctggtggatagtggtttgaaggatgatctggttctgggggatccgaatgcacctcggttcgtgttgtgggatggcaagttgaggcctgtaccttctagcccggcggacatagctttctttgacttgatgagcattggcggcaaactcagggctgcatttggtgctcttggaattcgcccctctcctcctcctccaggtcaggaggaatcagttgaagagtttgtccgtcgtaatcttggagatgaggtttttgaacgcctgattgagcctttttgttcaggtgtttatgcgggtgatccttcaaagttaagtatgaaagcagcatttggcaaagtttggaacctagagcaaaatgggggtagcatcattggtggagcttttaaagcaatccaggagagaaatcgtgctccaaagacacctcgagatccgcgtctgccaaaaccaaagggccaaacagttggatctcttaggaagggtctttccatgctgccagatgcactttcttcaaggttgggtgacaaagtgaaggtatcctggaagctttcagatatcagtaaattggacaaaggagggtacactctgacatatgaaactccagaaggattggtctcagtactgagtaaaagtgttgttatgaccattccatcctatgtagcaagcagtctattgcgtcctctatcagctgctgctgcagatgcattatcaaaattttattacccgccagttgcagctgtgtctatttcatatccaaaagaagcaatccggactgaatgcctaatagatggtgaactaaagggatttggtcaactgcatcctcgtagccaagggctgaaaacattaggaactatatacagctcatcactctttcctaatcgagcaccagctggaagggtactgctcttgaactatattggaggggccaccaatcccgagagtgaacttgttgaagcagttcatcaggatttgaaaaaagtcctcataaagcctaatgctaaggatccactcgtattgggtgtcagagtgtggccacaagcgattccacagttcttggttggtcattttgatgtcctagatgctgcaaatgctgctcttagggatactgagacccaagggttgttccttggtgggaattatgtgtccggtgtagccttgggccggtgtgttgagggtgcatatgatattgcagctgatgtggccaattttctatcacaatatgcttacaaatag

Protein Analysis

546

Amino Acids

58.39

Weight (kDa)

8.53

Isoelectric Point (pI)

39.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 197, 254, 844
AccIII TCCGGA 1 cut(s) 1176
AclWI GGATC 7 cut(s) 449, 462, 704, 833, 883, 1406, 1419
AcoI YGGCCR 3 cut(s) 264, 1439, 1608
AcsI RAATTY 2 cut(s) 585, 1121
AcyI GRCGYC 1 cut(s) 282
AfaI GTAC 4 cut(s) 504, 989, 1029, 1308
AfiI CCNNNNNNNGG 3 cut(s) 145, 608, 1569
AgsI TTSAA 9 cut(s) 133, 433, 629, 668, 717, 921, 1318, 1361, 1381
AjnI CCWGG 4 cut(s) 14, 607, 804, 947
AluBI AGCT 8 cut(s) 527, 791, 955, 1097, 1145, 1269, 1298, 1601
AluI AGCT 8 cut(s) 527, 791, 955, 1097, 1145, 1269, 1298, 1601
Alw21I GWGCWC 3 cut(s) 580, 823, 1294
Alw26I GTCTC 3 cut(s) 309, 1027, 1511
AlwI GGATC 7 cut(s) 449, 462, 704, 833, 883, 1406, 1419
AlwNI CAGNNNCTG 2 cut(s) 262, 1100
Ama87I CYCGRG 2 cut(s) 834, 1343
Aor13HI TCCGGA 1 cut(s) 1176
AoxI GGCC 9 cut(s) 264, 309, 373, 497, 862, 1332, 1439, 1567, 1608
ApoI RAATTY 2 cut(s) 585, 1121
Asp700I GAANNNNTTC 1 cut(s) 1365
AspLEI GCGC 3 cut(s) 197, 256, 262
AspS9I GGNCC 4 cut(s) 374, 862, 1332, 1567
AsuC2I CCSGG 1 cut(s) 515
AsuHPI GGTGA 6 cut(s) 56, 331, 400, 719, 941, 1211
AvaI CYCGRG 2 cut(s) 834, 1343
BalI TGGCCA 3 cut(s) 266, 1441, 1610
BamHI GGATCC 2 cut(s) 454, 1411
BbsI GAAGAC 1 cut(s) 76
Bbv12I GWGCWC 3 cut(s) 580, 823, 1294
BccI CCATC 3 cut(s) 479, 1066, 1190
BceAI ACGGC 3 cut(s) 208, 269, 376
BciT130I CCWGG 4 cut(s) 16, 609, 806, 949
BciVI GTATCC 2 cut(s) 955, 1504
BcnI CCSGG 1 cut(s) 515
BcoDI GTCTC 3 cut(s) 309, 1027, 1511
BfaI CTAG 3 cut(s) 510, 758, 1484
BfmI CTRYAG 1 cut(s) 1104
BfoI RGCGCY 1 cut(s) 263
BfuI GTATCC 2 cut(s) 955, 1504
BmcAI AGTACT 1 cut(s) 1029
Bme1390I CCNGG 5 cut(s) 16, 515, 609, 806, 949
BmeT110I CYCGRG 2 cut(s) 834, 1343
BmgT120I GGNCC 4 cut(s) 374, 862, 1332, 1567
BmiI GGNNCC 5 cut(s) 376, 456, 755, 1333, 1413
BmrFI CCNGG 5 cut(s) 16, 515, 609, 806, 949
BmsI GCATC 7 cut(s) 131, 258, 786, 898, 1099, 1234, 1477
BpiI GAAGAC 1 cut(s) 76
BpmI CTGGAG 2 cut(s) 591, 993
Bpu10I CCTNAGC 1 cut(s) 1407
BpuMI CCSGG 1 cut(s) 515
BsaHI GRCGYC 1 cut(s) 282
BsaI GGTCTC 3 cut(s) 309, 1027, 1511
BsaJI CCNNGG 5 cut(s) 467, 1237, 1522, 1534, 1563
BsaWI WCCGGW 3 cut(s) 172, 1176, 1553
BsaXI ACNNNNNCTCC 4 cut(s) 154, 184, 645, 675
Bsc4I CCNNNNNNNGG 3 cut(s) 145, 608, 1569
Bse118I RCCGGY 1 cut(s) 1569
Bse1I ACTGG 1 cut(s) 1136
BseAI TCCGGA 1 cut(s) 1176
BseBI CCWGG 4 cut(s) 16, 609, 806, 949
BseDI CCNNGG 5 cut(s) 467, 1237, 1522, 1534, 1563
BseGI GGATG 4 cut(s) 442, 490, 1058, 1225
BseLI CCNNNNNNNGG 3 cut(s) 145, 608, 1569
BseMII CTCAG 4 cut(s) 574, 1022, 1038, 1506
BseNI ACTGG 1 cut(s) 1136
BseRI GAGGAG 6 cut(s) 105, 108, 193, 588, 591, 594
Bsh1236I CGCG 3 cut(s) 197, 254, 844
Bsh1285I CGRYCG 1 cut(s) 150
BshFI GGCC 9 cut(s) 266, 311, 375, 499, 864, 1334, 1441, 1569, 1610
BsiEI CGRYCG 1 cut(s) 150
BsiHKAI GWGCWC 3 cut(s) 580, 823, 1294
BsiHKCI CYCGRG 2 cut(s) 834, 1343
BsiSI CCGG 5 cut(s) 173, 515, 1177, 1554, 1570
BslI CCNNNNNNNGG 3 cut(s) 145, 608, 1569
BsmAI GTCTC 3 cut(s) 309, 1027, 1511
BsmI GAATGC 2 cut(s) 466, 1190
BsnI GGCC 9 cut(s) 266, 311, 375, 499, 864, 1334, 1441, 1569, 1610
Bso31I GGTCTC 3 cut(s) 309, 1027, 1511
BsoBI CYCGRG 2 cut(s) 834, 1343
Bsp1286I GDGCHC 3 cut(s) 580, 823, 1294
Bsp13I TCCGGA 1 cut(s) 1176
Bsp143I GATC 7 cut(s) 198, 439, 454, 709, 838, 875, 1411
BspANI GGCC 9 cut(s) 266, 311, 375, 499, 864, 1334, 1441, 1569, 1610
BspCNI CTCAG 4 cut(s) 573, 1023, 1037, 1507
BspEI TCCGGA 1 cut(s) 1176
BspFNI CGCG 3 cut(s) 197, 254, 844
BspLI GGNNCC 5 cut(s) 376, 456, 755, 1333, 1413
BspMAI CTGCAG 1 cut(s) 1108
BspPI GGATC 7 cut(s) 449, 462, 704, 833, 883, 1406, 1419
BspTNI GGTCTC 3 cut(s) 309, 1027, 1511
BsrFI RCCGGY 1 cut(s) 1569
BsrI ACTGG 1 cut(s) 1136
BssAI RCCGGY 1 cut(s) 1569
BssECI CCNNGG 5 cut(s) 467, 1237, 1522, 1534, 1563
BssMI GATC 7 cut(s) 198, 439, 454, 709, 838, 875, 1411
BssNI GRCGYC 1 cut(s) 282
BssT1I CCWWGG 4 cut(s) 1237, 1522, 1534, 1563
Bst2UI CCWGG 4 cut(s) 16, 609, 806, 949
Bst4CI ACNGT 5 cut(s) 159, 166, 343, 871, 1458
Bst6I CTCTTC 2 cut(s) 60, 624
BstACI GRCGYC 1 cut(s) 282
BstAPI GCANNNNNTGC 2 cut(s) 575, 1499
BstC8I GCNNGC 4 cut(s) 21, 258, 264, 1072
BstDEI CTNAG 7 cut(s) 560, 881, 1024, 1031, 1407, 1505, 1515
BstENI CCTNNNNNAGG 1 cut(s) 606
BstF5I GGATG 4 cut(s) 442, 490, 1058, 1225
BstFNI CGCG 3 cut(s) 197, 254, 844
BstH2I RGCGCY 1 cut(s) 263
BstHHI GCGC 3 cut(s) 197, 256, 262
BstKTI GATC 7 cut(s) 201, 442, 457, 712, 841, 878, 1414
BstMAI GTCTC 3 cut(s) 309, 1027, 1511
BstMBI GATC 7 cut(s) 198, 439, 454, 709, 838, 875, 1411
BstMCI CGRYCG 1 cut(s) 150
BstNI CCWGG 4 cut(s) 16, 609, 806, 949
BstSCI CCNGG 5 cut(s) 14, 513, 607, 804, 947
BstSFI CTRYAG 1 cut(s) 1104
BstUI CGCG 3 cut(s) 197, 254, 844
BstV2I GAAGAC 1 cut(s) 76
BstX2I RGATCY 4 cut(s) 454, 838, 875, 1411
BstXI CCANNNNNNTGG 2 cut(s) 418, 872
BstYI RGATCY 4 cut(s) 454, 838, 875, 1411
BsuI GTATCC 2 cut(s) 955, 1504
BsuRI GGCC 9 cut(s) 266, 311, 375, 499, 864, 1334, 1441, 1569, 1610
BtgZI GCGATG 1 cut(s) 235
BtsCI GGATG 4 cut(s) 442, 490, 1058, 1225
Cac8I GCNNGC 4 cut(s) 21, 258, 264, 1072
CaiI CAGNNNCTG 2 cut(s) 262, 1100
CfoI GCGC 3 cut(s) 197, 256, 262
Cfr10I RCCGGY 1 cut(s) 1569
Cfr13I GGNCC 4 cut(s) 374, 862, 1332, 1567
CseI GACGC 3 cut(s) 290, 833, 1073
Csp6I GTAC 4 cut(s) 503, 988, 1028, 1307
CspCI CAANNNNNGTGG 4 cut(s) 1404, 1439, 1443, 1478
CviAII CATG 3 cut(s) 403, 412, 898
CviQI GTAC 4 cut(s) 503, 988, 1028, 1307
DdeI CTNAG 7 cut(s) 560, 881, 1024, 1031, 1407, 1505, 1515
DpnI GATC 7 cut(s) 200, 441, 456, 711, 840, 877, 1413
DpnII GATC 7 cut(s) 198, 439, 454, 709, 838, 875, 1411
DraI TTTAAA 1 cut(s) 796
EaeI YGGCCR 3 cut(s) 264, 1439, 1608
Eam1104I CTCTTC 2 cut(s) 60, 624
EarI CTCTTC 2 cut(s) 60, 624
EciI GGCGGA 3 cut(s) 39, 246, 533
Eco130I CCWWGG 4 cut(s) 1237, 1522, 1534, 1563
Eco147I AGGCCT 1 cut(s) 499
Eco31I GGTCTC 3 cut(s) 309, 1027, 1511
Eco32I GATATC 1 cut(s) 964
Eco88I CYCGRG 2 cut(s) 834, 1343
EcoNI CCTNNNNNAGG 1 cut(s) 606
EcoO109I RGGNCCY 1 cut(s) 374
EcoRI GAATTC 1 cut(s) 585
EcoRII CCWGG 4 cut(s) 14, 607, 804, 947
EcoRV GATATC 1 cut(s) 964
EcoT14I CCWWGG 4 cut(s) 1237, 1522, 1534, 1563
EcoT22I ATGCAT 1 cut(s) 1114
ErhI CCWWGG 4 cut(s) 1237, 1522, 1534, 1563
FaeI CATG 3 cut(s) 406, 415, 901
FatI CATG 3 cut(s) 402, 411, 897
FauI CCCGC 2 cut(s) 697, 1140
FauNDI CATATG 2 cut(s) 1000, 1588
FokI GGATG 4 cut(s) 449, 497, 1045, 1212
FspBI CTAG 3 cut(s) 510, 758, 1484
GlaI GCGC 3 cut(s) 196, 255, 261
GsuI CTGGAG 2 cut(s) 591, 993
HaeII RGCGCY 1 cut(s) 263
HaeIII GGCC 9 cut(s) 266, 311, 375, 499, 864, 1334, 1441, 1569, 1610
HapII CCGG 5 cut(s) 173, 515, 1177, 1554, 1570
HgaI GACGC 3 cut(s) 290, 833, 1073
HhaI GCGC 3 cut(s) 197, 256, 262
Hin1I GRCGYC 1 cut(s) 282
Hin1II CATG 3 cut(s) 406, 415, 901
Hin6I GCGC 3 cut(s) 195, 254, 260
HinP1I GCGC 3 cut(s) 195, 254, 260
HincII GTYRAC 2 cut(s) 211, 1220
HindII GTYRAC 2 cut(s) 211, 1220
HindIII AAGCTT 1 cut(s) 953
HinfI GANTC 5 cut(s) 234, 243, 398, 620, 1450
HpaII CCGG 5 cut(s) 173, 515, 1177, 1554, 1570
HphI GGTGA 6 cut(s) 56, 331, 400, 719, 941, 1211
Hpy166II GTNNAC 6 cut(s) 162, 211, 990, 1202, 1220, 1352
Hpy188I TCNGA 7 cut(s) 140, 291, 397, 459, 961, 996, 1433
Hpy188III TCNNGA 7 cut(s) 614, 836, 1010, 1177, 1315, 1343, 1373
Hpy8I GTNNAC 6 cut(s) 162, 211, 990, 1202, 1220, 1352
Hpy99I CGWCG 2 cut(s) 284, 645
HpyCH4III ACNGT 5 cut(s) 159, 166, 343, 871, 1458
HpyF3I CTNAG 7 cut(s) 560, 881, 1024, 1031, 1407, 1505, 1515
Hsp92I GRCGYC 1 cut(s) 282
Hsp92II CATG 3 cut(s) 406, 415, 901
HspAI GCGC 3 cut(s) 195, 254, 260
Kpn2I TCCGGA 1 cut(s) 1176
Kzo9I GATC 7 cut(s) 198, 439, 454, 709, 838, 875, 1411
LmnI GCTCC 2 cut(s) 788, 826
LweI GCATC 7 cut(s) 131, 258, 786, 898, 1099, 1234, 1477
MaeI CTAG 3 cut(s) 510, 758, 1484
MaeIII GTNAC 3 cut(s) 166, 301, 929
MalI GATC 7 cut(s) 200, 441, 456, 711, 840, 877, 1413
MboI GATC 7 cut(s) 198, 439, 454, 709, 838, 875, 1411
MboII GAAGA 6 cut(s) 47, 76, 121, 380, 641, 909
MflI RGATCY 4 cut(s) 454, 838, 875, 1411
MhlI GDGCHC 3 cut(s) 580, 823, 1294
MlsI TGGCCA 3 cut(s) 266, 1441, 1610
MluCI AATT 5 cut(s) 585, 971, 1121, 1543, 1612
MluNI TGGCCA 3 cut(s) 266, 1441, 1610
MlyI GAGTC 1 cut(s) 237
MmeI TCCRAC 2 cut(s) 304, 853
Mox20I TGGCCA 3 cut(s) 266, 1441, 1610
Mph1103I ATGCAT 1 cut(s) 1114
MroI TCCGGA 1 cut(s) 1176
MroXI GAANNNNTTC 1 cut(s) 1365
MscI TGGCCA 3 cut(s) 266, 1441, 1610
MseI TTAA 2 cut(s) 722, 795
MslI CAYNNNNRTG 2 cut(s) 416, 1476
Msp20I TGGCCA 3 cut(s) 266, 1441, 1610
MspA1I CMGCKG 5 cut(s) 240, 1097, 1145, 1298, 1601
MspI CCGG 5 cut(s) 173, 515, 1177, 1554, 1570
MspR9I CCNGG 5 cut(s) 16, 515, 609, 806, 949
Mva1269I GAATGC 2 cut(s) 466, 1190
MvaI CCWGG 4 cut(s) 16, 609, 806, 949
MvnI CGCG 3 cut(s) 197, 254, 844
NciI CCSGG 1 cut(s) 515
NdeI CATATG 2 cut(s) 1000, 1588
NdeII GATC 7 cut(s) 198, 439, 454, 709, 838, 875, 1411
NlaIII CATG 3 cut(s) 406, 415, 901
NlaIV GGNNCC 5 cut(s) 376, 456, 755, 1333, 1413
NmuCI GTSAC 2 cut(s) 301, 929
NsiI ATGCAT 1 cut(s) 1114
PaeR7I CTCGAG 1 cut(s) 834
PceI AGGCCT 1 cut(s) 499
PcsI WCGNNNNNNNCGW 1 cut(s) 841
PctI GAATGC 2 cut(s) 466, 1190
PdmI GAANNNNTTC 1 cut(s) 1365
PfeI GAWTC 4 cut(s) 234, 398, 620, 1450
PfoI TCCNGGA 2 cut(s) 804, 947
PleI GAGTC 1 cut(s) 237
PpsI GAGTC 1 cut(s) 237
Psp6I CCWGG 4 cut(s) 14, 607, 804, 947
PspGI CCWGG 4 cut(s) 14, 607, 804, 947
PspN4I GGNNCC 5 cut(s) 376, 456, 755, 1333, 1413
PspPI GGNCC 4 cut(s) 374, 862, 1332, 1567
PstI CTGCAG 1 cut(s) 1108
PstNI CAGNNNCTG 2 cut(s) 262, 1100
PsuI RGATCY 4 cut(s) 454, 838, 875, 1411
PvuII CAGCTG 4 cut(s) 1097, 1145, 1298, 1601
RsaI GTAC 4 cut(s) 504, 989, 1029, 1308
RsaNI GTAC 4 cut(s) 503, 988, 1028, 1307
RseI CAYNNNNRTG 2 cut(s) 416, 1476
SaqAI TTAA 2 cut(s) 722, 795
Sau3AI GATC 7 cut(s) 198, 439, 454, 709, 838, 875, 1411
Sau96I GGNCC 4 cut(s) 374, 862, 1332, 1567
ScaI AGTACT 1 cut(s) 1029
SchI GAGTC 1 cut(s) 237
ScrFI CCNGG 5 cut(s) 16, 515, 609, 806, 949
SduI GDGCHC 3 cut(s) 580, 823, 1294
SfaNI GCATC 7 cut(s) 131, 258, 786, 898, 1099, 1234, 1477
SfcI CTRYAG 1 cut(s) 1104
Sfr274I CTCGAG 1 cut(s) 834
SlaI CTCGAG 1 cut(s) 834
SmiMI CAYNNNNRTG 2 cut(s) 416, 1476
SmlI CTYRAG 1 cut(s) 834
SmoI CTYRAG 1 cut(s) 834
Sse9I AATT 5 cut(s) 585, 971, 1121, 1543, 1612
SseBI AGGCCT 1 cut(s) 499
SspMI CTAG 3 cut(s) 510, 758, 1484
StuI AGGCCT 1 cut(s) 499
StyD4I CCNGG 5 cut(s) 14, 513, 607, 804, 947
StyI CCWWGG 4 cut(s) 1237, 1522, 1534, 1563
TaaI ACNGT 5 cut(s) 159, 166, 343, 871, 1458
TaqI TCGA 2 cut(s) 835, 1288
TaqII GACCGA 2 cut(s) 136, 333
TasI AATT 5 cut(s) 585, 971, 1121, 1543, 1612
TatI WGTACW 1 cut(s) 1027
TauI GCSGC 4 cut(s) 44, 188, 231, 555
TfiI GAWTC 4 cut(s) 234, 398, 620, 1450
Tru1I TTAA 2 cut(s) 722, 795
Tru9I TTAA 2 cut(s) 722, 795
TseFI GTSAC 2 cut(s) 301, 929
Tsp45I GTSAC 2 cut(s) 301, 929
TspDTI ATGAA 4 cut(s) 743, 1017, 1146, 1358
TspGWI ACGGA 4 cut(s) 70, 196, 320, 629
XagI CCTNNNNNAGG 1 cut(s) 606
XapI RAATTY 2 cut(s) 585, 1121
XhoI CTCGAG 1 cut(s) 834
XmnI GAANNNNTTC 1 cut(s) 1365
XspI CTAG 3 cut(s) 510, 758, 1484
ZrmI AGTACT 1 cut(s) 1029
Zsp2I ATGCAT 1 cut(s) 1114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.