pycom10g06150

Belongs to the PI3 PI4-kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
6931463 .. 6951728
20266 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 6222 bp
ATGGAGGCGTTGATGGAGCTCTGCGACCTGATTGCGGACCACCCGGCGCAATTCACCGAGAAGCTTTCGTGGATTTGTGGCCGGTGTCCGCCTCCCGAGTTTTTTCTGGGCGGATCACCTAGGGTTTCGCGGATTCAGCTCAATGCTGTCCTCGCCGTCGCGCGCTTCATCTCCAAATGCCCCGATTCTGCTGATCTCCGCCCGAAATCGGTGGTTCTCGAGTTCCTACGCTCGGTTCCCGCGTCGTTCAATCGGTCCTTTTGGCCCCAATCGTTTGGAAACGACTCGATTGCTTCTTTATTCTCGGATTTTTTGGGGTGCGTGTGTAAAGCTACCGAATTGTCTCCCGATTTTGCTACAGAGATTGCTGGGTTCACTGGTGAGGTCGTAGTTTTGGCAATTACCAGTGGCGGTGAAGATTTAGGTATTTGTCGGGCTTTCCTCATGGCCCTATCAGAACATTTCCTTCCAATTTTGCCTTCGGATGCGGAGAAGTTGATTACAATGCTTATTGACCAGTTTGCGGCTTCGGGACCGGTGGTTCAGTCCCCGATTACGCCAAGACGAATTGGGGCCTACTCAGAGACCTCGTCTGCGCAGAGCTCGCCAATGAATGGAAACCATTACCAAGCGAATGAGAGCTCCAGCCCCAGAAATGAGGCGAGCAATGTGTCGGGTTCATCGGGTAGTATATCGTCAAGGGGGTCGGTGATGATGAATGGGAGCAGCATTGTGTGGAAGAGTGGTGTTGATCAACTGGGTGTGAATTTCGGTCTTGGTGAGGGAGGCGGAGCTGTGATGCTTAGGCAGCAAGTTTCTTCATTTGAGGAAGAGTCTGTTGAGAATTTGGAGAAGCAAGAGATTGCTTTCAAATTGGTAGCTCATATTTTGGATAAAGTCAGTATCGATTCTGCGCTTTTGGATCGGGTCAGATTAATCGCAAAGAGGCAGCTACAGTCTACGTCAGTGTTTCTGAAGATTAGAAAGCGGGATTGGACTGAACATGGGGCACTTTTGAAAGCAAGAATCAATACGAAACTGTCAGTTTATCAAGCTGCTGCCAAGTTGACTCTTAGTTGCCTGGCTTGCTATGATACTGACGTGAAATCAGCAAAGAAGTTGGCACATGAGAGTCTGGCATTGTTGATGGATGCTTCTGAAGCCTGTTTACTCTCCGTGTGGCGGAAAATGAGAGTTTGTGAAGAGCTCTTTGCTTCTTTGCTATCTGGGCTTGCTCAAATTGCTGTCAAGCGTGGGGGCCAGGCATTACGTATTTTGCTCATCCGCCTCAAACCTGTTGTGTTAACTGTATGCGCACAGGCTGATACTTGGGCAACCAGCCAGGCACCAATGTTTGAGAGTGTGATGAAGACGAGTTGTGAGATAATCGAATCTTGTTGGACTAAGGAGCGTGCGCCGGTTGACACATTCATAATGGGATTAGCGACAAGTATTCGTGAACGAAATGACTATGAGGAACAGGTTGATAAAAACAAAGAGGCACTTCCTGTTGTGCAGCTTAATGTTATACGCTTGCTAGCCGATCTGAATGTTGCTGTGAAGAAGTCTGAAGTTGTGGACATGATATTACCTCTATTTATTGAAAGCTTAGAAGAGGGCGATGCTTCGAGTCCTAGTTTATTGCGACTCCAGCTCCTTGATGCTGTATCACGCATGGCAAGTTTAGGTTTTGAGAAGTCCTACCGGGAGACTGTTGTTCTAATGACAAGGAGTTACTTAAGTAAACTTTCAAGTTTAGGATCTGCTGAAAGCAAAACTGTGCCACCAGAAGCCACAACAGAGCGCCTTGAGACTCTTCCTGCAGGATTTCTTCTGATTGCTAGTGATCTTACAAATGCTAAATTACGTTCAGACTATCGTCACCGTCTACTGTCTTTATGCTCAGATGTAGGCCTCACTGCTGAATCCAAAAGCGGAAGGAGTGGGGGAGATTTTTTGGGACCACTACTTCCTGCTGTAGCTGAGATATGTTCTGATTTTGATCCTACAGTAGATGTGGAGCCTTCACTCTTAAAGTTATTTCGCAACCTGTGGCTCTATGTTGCTCTTTTTGGCTTAGCACCTCCCATACAGAATGCTCAGCAACCTGCAAAGCCACTTTCCATGTCACTCAATAGTGTAGGAAGCATGGGTACTATTCCACTTCAAGCTGTGGGTGGCCCATACATGTGGAGTGCACAGTGGTCTTCAGCTGTCCAGCAAATTGCTCAAGGAACACCTCCACTTGTTGTTAGCTCAGTGAAATGGCTTGAAGATGAATTGGAACTTAATGCTCTTCAAAATCCTGGCAGTCGTCAAGGGAGTGGGAATGAGAAAGTTGCTCTAGCCCAAAGAGCTGCTCTTTCTACTGCTCTAGGAGGGCGAGTTGAGGTTGCAGCAATGAACACTATATCAGGTGTGAAAGCTACCTATCTTCTTGCGGTAGCATTCTTGGAAATCATACGATTCAGCAGCAATGGTGGCATCCTCAATGGTGTCACTAGTTCAGCTTCTTCTAGAAGTGCATTCAGTTGTGTTTTTGAATACCTAAAAACTCCAAATCTTGTGCCCGCTGTCTTCCAATGCTTGACGGCAACCGTGCATAGGGCTTTTGAAACAGCAGTGACGTGGCTGGAAGATCGAATATCCGAAACAGGCAATGAAGCTGAGGTTAGGGAATCAACACTTTCTACCCATGCTTGCTTTCTGATAAAAAGCATGTCACAGAGAGAGGAACATATCCGGGAAGTTTCTGTGAACTTGCTGAGTCAGCTTAAAGATAGGTTTCCACAGGTCTTGTGGAATTCCTCTTGTGTTGATTCCCTGCTATTTTCAATTTATAATGATTCGCCTACTACTGTTGTCAATGATCCTGCTTGGGTGCTGACAGTTCGTTCTTTGTACCAAAAGATTGTTCGAGAGTGGATCGTTAAATCACTTTCACATGCTCCCTGCTCTAGCCAGGGTCTTCTCCAGGAAAAGCTTTGTAAAGCAAACACGTGGCAAAGATCGCAGCATACAACTGATGTGGTATCTCTTTTATCAGAAATACGGATCGGCACTGGTAAAATTGATTGCTGGAATGGAATACAAACGGCTAATATTCCTGCAGTCATGGCCGCTGCAGCTGCAGCATCAGGAGCAAACTTGAAATTATTAGAAGCCTTCAATTTGGAGGTGCTCAGTACCGGCATCGTTAGTGCAACAGTTAAGTGCAACCATGCTGGAGAAATTGCTGGCATGAGAAGCTTGTATAACAGCATTGGTGGATTTCAATCTGGTACAACACCGACTGGATTTGGTATCGGTGCGGGCCTTCAAAGGTTGATCTCAGGAGCTCGTCAACAGACACAAGCTGAGGACGATTCATTTAATGGAATCTTACTCACAAAGTTTGTGCATTTACTACAGCAATTTGTTAATTCTGCAGAGAAAGGTGTGGAAGTGGACAAGTCTCAGTTTCGCCAGATTTGTTCTCAGGCAACTGCATTACTGCTGTCAAATCTGGGCTCAAATTCAAAATCAAATGTAGAGGGCTTCTCACAACTTCTTCGTCTTCTCTGTTGGTGTCCAGCTTACATTTCCACGCCCGACGCAATGGAAACTGGTGTTTTTGTTTGGACTTGGTTAGTTTCTGCTGCGCCGGAACTGGGATCTCTAGTCCTTGCGGAGCTTGTTGATGCATGGTTGTGGACCATTGATACAAGACGCGGTATCTTTGCATTTGATGTGAAACATTCTGGGCCTGCAGCAAAATTAAGGCCTCACCTTTCACCTGGAGAGCCAGAACCACAGCCAGACATTGATCCTGTTGAGCAAATAATGGCTCATAGATTATGGCTTGGATTTCTTATGGATCGCTTTGAGGTAGTTCGACACAACAGTGTTGAGCAGCTCTTGCTTCTTGGACGAATGTTGCAAGGGATAACAAAGATTCCCTGGAATTTTTCGCGCCATCCTGCTGCTACTGGTACCTTTTTTACTGTCATGCTTCTTGGACTCAAGTTCTGCTCATGCCAATCCCAGCGAAATTTGCAGAACTTTAAAACAGGGCTTCAGTTGCTGGAAGATCGGATATATAGGACCTCTTTGGGTTGGTTTGCATATGAGCCTGAATGGTATGATACTAGCTATATGAATTTTTCTCAGAGTGAAGCTCAATCCATCTCTTTATTTGTCCACTACCTTTCAAATGAGCGAGTAGATGCAGCAGTCTATTCTGATTCAAAAGGGAGAGGACGAGAAAATGGGACCACTTTGGTTGATACGAACGATCGATCTCATCCTGTCTGGGGTCAAATGGAGAACTATGCTGTGGGAAGAGAAAAACGTAAGCAGCTACTTTTGATGCTATGCCAGCATGAGGCTGACAGGCTTGAAGTTTGGTCGCAACCAACTAATACAAAGGAGAGTGCCTCTTCACGGCAAAAAATTAGTTCGGATAAATGGATTGAGCATGCTAGGACTGCTTTTGCTGTAGATCCTCGAATTGCTTTATCCCTGGCATCACGGTTCCCAACAAACACATTCTTAAAGGCTGAAGTTACCCAGTTGGTTCAGTCACATATCGTTGATATCCGCTCCATTCCAGAAGCATTGCCATATTTTGTTACCCCAAAGGCAGTTGATGAAAATTCGGCACTCTTGCAACAATTGCCACACTGGGCTGCTTGCTCAATTACACAAGCTCTTGAGTTCCTTACTCCTGCATATAAGGGCCATCCTCGTGTCATGGCATATGTTCTTAGGGTTCTGGAGTCTTATCCTCCTGAACGAGTAACTTTCTTCATGCCACAGCTGGTGCAGGCTATGCGGTATGATGATGAGAGGTTAGTAGAAGGATATCTGCTTAGAGCAGCTCAAAGAAGTGAAATATTTGCCCATATTTTAATCTGGCACTTACAGGGTGAGATGTTTGTTCCAGAACCGGAAAAAAAAGATGCTGTTCCTGTGAAGAATAGTTCGTTTCAAGAGTTGTTGCCTCTTGTTAGACAGCATATCATTGATGGTTTCAGTCCCAAGGCACTTGATATTTTTCAAAGAGAATTTGATTTCTTTGACAAGGTTACATCTATTTCTGGTGTACTCTTTCCGCTTCCAAAGGAAGAACGCCGAGCTGGTATCCGGAGAGAGTTGGAGAAAATTGAAGTTGAGGGAGAGGATCTCTATTTGCCAATTGCTCCTACCAAGCTTGTAAGGGGCATTCAGGTAGATAGTGGAATACCCTTGCAATCTGCAGCAAAAGTTCCTATAATGATAACATTTAATGTTGTCGATCGGGTTGGGGACCGCAGTGATGTAAAACCACAAGCTTGTATGTTCAAGGTTGGAGATGATTGCCGCCAGGATGTTCTTGCTCTTCAAGTGATTTCCCTATTGAGAGACATATTTGAAGCAGTTGGAATTAATCTTTATTTGTTTCCGTATGGTGTACTCCCAACTGGCCCAGAGAGAGGCATTATTGAGGTTGTACCTAATACGCGGAGCAGAAGTCAGATGGGTGAAACTACTGATGGTGGTTTGTATGAGATTTTTCAACAGGATTACGGACCTGTTGGGTCTGCCAGCTTTGAAGCTGCGCGTGAAAACTTCATCATTAGCAGTGCTGGTTATGCAGTTGCCAGCCTTTTACTTCAACCAAAGGATCGACACAATGGGAATCTTCTGTTTGACAGCGTGGGAAGGCTTGTTCATATTGATTTTGGTTTCATTTTGGAAACCTCACCAGGTGGAAACATGCGTTTTGAAAGTGCACACTTTAAGCTCAGTCACGAGATGACACAATTATTAGACCCTTCTAGGGTTATGAAAAGCGATACCTGGAACCAATTTGTGAGCTTGTGCGTTAAGGGTTACCTTGCTGCCCGCCGATACATGGATGGGATTATCAACACGGTATCACTAATGCTAGACAGTGGGCTACCTTGCTTCAGCCGGGGCGATCCTATTGGAAATCTTCGTAAGAGATTTCATCCAGAGATGAGTGAGCGTGAGGCGGCCAATTTTATCGATCGATCATGTATGCACGGATGCCTACAACAAATGGACCACCGCTGGGTACGACTTGATACAGTTTCTGCAGCAGGGCATCGAGAAGTAAAAAGTGAGACGTTTGGAGCTTGTTTAACATGTGTACATGATTGCCTGTGTAATGGTAAATTTCATCGTCTTACAGCTGCAATTTATTTCCCGAGGGGTCTCCACTTTATAGTGTTGAGATGA

Protein Analysis

2074

Amino Acids

229.06

Weight (kDa)

6.19

Isoelectric Point (pI)

44.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PI4K_N PF19274 290 - 1470 0.0 PI4-kinase N-terminal region
PI3Ka PF00613 1511 - 1644 1.5e-23 Phosphoinositide 3-kinase family, accessory domain (PIK domain)
PI3_PI4_kinase PF00454 1771 - 1978 2.6e-35 Phosphatidylinositol 3- and 4-kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2841
Acc16I TGCGCA 2 cut(s) 597, 1315
Acc36I ACCTGC 1 cut(s) 2116
Acc65I GGTACC 1 cut(s) 3971
AccB1I GGYRCC 2 cut(s) 1345, 3971
AccB7I CCANNNNNTGG 1 cut(s) 614
AccBSI CCGCTC 1 cut(s) 4581
AccI GTMKAC 2 cut(s) 959, 1888
AccII CGCG 8 cut(s) 130, 161, 163, 242, 3711, 3952, 5482, 5581
AccIII TCCGGA 1 cut(s) 5124
AcoI YGGCCR 3 cut(s) 79, 3117, 5997
AcuI CTGAAG 7 cut(s) 995, 1179, 1590, 2193, 4040, 4560, 5914
AcvI CACGTG 1 cut(s) 3000
AdeI CACNNNGTG 1 cut(s) 5729
AflII CTTAAG 1 cut(s) 1738
AflIII ACRYGT 3 cut(s) 2187, 2997, 6128
AgeI ACCGGT 1 cut(s) 535
AhlI ACTAGT 1 cut(s) 2501
AjiI CACGTC 2 cut(s) 1102, 2628
AjuI GAANNNNNNNTTGG 6 cut(s) 463, 495, 976, 1008, 2898, 2930
AleI CACNNNNGTG 1 cut(s) 3882
AloI GAACNNNNNNTCC 4 cut(s) 525, 557, 5673, 5705
Alw21I GWGCWC 8 cut(s) 21, 605, 644, 1209, 2200, 3183, 3340, 5755
Alw26I GTCTC 8 cut(s) 348, 578, 1703, 1805, 3459, 5376, 6101, 6203
Alw44I GTGCAC 2 cut(s) 2196, 5751
AlwNI CAGNNNCTG 2 cut(s) 4063, 6077
Ama87I CYCGRG 3 cut(s) 95, 218, 6190
Aor13HI TCCGGA 1 cut(s) 5124
ApaLI GTGCAC 2 cut(s) 2196, 5751
AseI ATTAAT 2 cut(s) 935, 5406
AsiGI ACCGGT 1 cut(s) 535
Asp718I GGTACC 1 cut(s) 3971
AspA2I CCTAGG 1 cut(s) 119
AsuC2I CCSGG 4 cut(s) 44, 1706, 2744, 5936
AsuNHI GCTAGC 1 cut(s) 1537
AvaI CYCGRG 3 cut(s) 95, 218, 6190
AvrII CCTAGG 1 cut(s) 119
BaeGI GKGCMC 4 cut(s) 1012, 2200, 2571, 5755
BaeI ACNNNNGTAYC 2 cut(s) 1086, 1119
BanI GGYRCC 2 cut(s) 1345, 3971
BanII GRGCYC 6 cut(s) 21, 605, 644, 1209, 3340, 3512
BarI GAAGNNNNNNTAC 4 cut(s) 1152, 1184, 2137, 2169
BauI CACGAG 2 cut(s) 4725, 5771
BbrPI CACGTG 1 cut(s) 3000
BbsI GAAGAC 5 cut(s) 1376, 2199, 2569, 2960, 3548
Bbv12I GWGCWC 8 cut(s) 21, 605, 644, 1209, 2200, 3183, 3340, 5755
BbvCI CCTCAGC 2 cut(s) 2667, 3357
BccI CCATC 9 cut(s) 7, 1141, 3963, 4172, 4728, 5000, 5491, 5507, 5873
BceAI ACGGC 4 cut(s) 140, 2607, 3111, 4439
BcgI CGANNNNNNTGC 4 cut(s) 14, 48, 272, 306
BciVI GTATCC 1 cut(s) 5132
BclI TGATCA 1 cut(s) 751
BcnI CCSGG 4 cut(s) 44, 1706, 2744, 5936
BcoDI GTCTC 8 cut(s) 348, 578, 1703, 1805, 3459, 5376, 6101, 6203
BcuI ACTAGT 1 cut(s) 2501
BfoI RGCGCY 1 cut(s) 1807
BfrI CTTAAG 1 cut(s) 1738
BfuAI ACCTGC 1 cut(s) 2116
BfuI GTATCC 1 cut(s) 5132
BlnI CCTAGG 1 cut(s) 119
BlpI GCTNAGC 2 cut(s) 2077, 2100
BmeT110I CYCGRG 3 cut(s) 95, 218, 6190
BmgBI CACGTC 2 cut(s) 1102, 2628
BmrI ACTGGG 4 cut(s) 767, 3659, 4543, 4672
BmtI GCTAGC 1 cut(s) 1541
BmuI ACTGGG 4 cut(s) 767, 3659, 4543, 4672
BoxI GACNNNNGTC 1 cut(s) 1878
BpiI GAAGAC 5 cut(s) 1376, 2199, 2569, 2960, 3548
BplI GAGNNNNNCTC 8 cut(s) 3524, 3556, 4141, 4173, 4400, 4432, 5148, 5180
BpmI CTGGAG 6 cut(s) 628, 1634, 2957, 3246, 3798, 4775
Bpu10I CCTNAGC 3 cut(s) 803, 2667, 3357
Bpu1102I GCTNAGC 2 cut(s) 2077, 2100
BpuEI CTTGAG 4 cut(s) 1829, 2214, 3986, 4712
BpuMI CCSGG 4 cut(s) 44, 1706, 2744, 5936
Bsa29I ATCGAT 4 cut(s) 906, 4276, 6009, 6013
BsaAI YACGTR 2 cut(s) 1271, 3000
BsaBI GATNNNNATC 2 cut(s) 2001, 3274
BsaI GGTCTC 2 cut(s) 578, 6203
BsaJI CCNNGG 7 cut(s) 119, 2962, 3938, 4500, 5019, 5935, 6191
BsaWI WCCGGW 3 cut(s) 535, 4927, 5124
BsaXI ACNNNNNCTCC 6 cut(s) 1638, 1668, 2370, 2400, 5476, 5506
Bse118I RCCGGY 4 cut(s) 81, 535, 1417, 3188
Bse3DI GCAATG 6 cut(s) 673, 2406, 2482, 2665, 3603, 4595
Bse8I GATNNNNATC 2 cut(s) 2001, 3274
BseAI TCCGGA 1 cut(s) 5124
BseCI ATCGAT 4 cut(s) 906, 4276, 6009, 6013
BseDI CCNNGG 7 cut(s) 119, 2962, 3938, 4500, 5019, 5935, 6191
BseJI GATNNNNATC 2 cut(s) 2001, 3274
BseMI GCAATG 6 cut(s) 673, 2406, 2482, 2665, 3603, 4595
BsePI GCGCGC 1 cut(s) 161
BseSI GKGCMC 4 cut(s) 1012, 2200, 2571, 5755
BseYI CCCAGC 3 cut(s) 368, 4023, 6054
BsgI GTGCAG 2 cut(s) 1535, 4823
Bsh1236I CGCG 8 cut(s) 130, 161, 163, 242, 3711, 3952, 5482, 5581
Bsh1285I CGRYCG 3 cut(s) 4276, 5278, 6013
BshNI GGYRCC 2 cut(s) 1345, 3971
BshTI ACCGGT 1 cut(s) 535
BshVI ATCGAT 4 cut(s) 906, 4276, 6009, 6013
BsiEI CGRYCG 3 cut(s) 4276, 5278, 6013
BsiHKAI GWGCWC 8 cut(s) 21, 605, 644, 1209, 2200, 3183, 3340, 5755
BsiHKCI CYCGRG 3 cut(s) 95, 218, 6190
BslFI GGGAC 6 cut(s) 532, 546, 1974, 4264, 5001, 5300
BsmAI GTCTC 8 cut(s) 348, 578, 1703, 1805, 3459, 5376, 6101, 6203
BsmBI CGTCTC 1 cut(s) 6101
BsmFI GGGAC 6 cut(s) 532, 546, 1974, 4264, 5001, 5300
BsmI GAATGC 4 cut(s) 2101, 2447, 2525, 5202
Bso31I GGTCTC 2 cut(s) 578, 6203
BsoBI CYCGRG 3 cut(s) 95, 218, 6190
Bsp13I TCCGGA 1 cut(s) 5124
Bsp1407I TGTACA 1 cut(s) 6133
Bsp1720I GCTNAGC 2 cut(s) 2077, 2100
BspDI ATCGAT 4 cut(s) 906, 4276, 6009, 6013
BspEI TCCGGA 1 cut(s) 5124
BspFNI CGCG 8 cut(s) 130, 161, 163, 242, 3711, 3952, 5482, 5581
BspMAI CTGCAG 8 cut(s) 1825, 3112, 3127, 3133, 3430, 3751, 5239, 6082
BspMI ACCTGC 1 cut(s) 2116
BspOI GCTAGC 1 cut(s) 1541
BspQI GCTCTTC 3 cut(s) 1197, 2301, 5364
BspT107I GGYRCC 2 cut(s) 1345, 3971
BspTI CTTAAG 1 cut(s) 1738
BspTNI GGTCTC 2 cut(s) 578, 6203
BsrBI CCGCTC 1 cut(s) 4581
BsrDI GCAATG 6 cut(s) 673, 2406, 2482, 2665, 3603, 4595
BsrFI RCCGGY 4 cut(s) 81, 535, 1417, 3188
BsrGI TGTACA 1 cut(s) 6133
BssAI RCCGGY 4 cut(s) 81, 535, 1417, 3188
BssECI CCNNGG 7 cut(s) 119, 2962, 3938, 4500, 5019, 5935, 6191
BssHII GCGCGC 1 cut(s) 161
BssSI CACGAG 2 cut(s) 4725, 5771
BssT1I CCWWGG 2 cut(s) 119, 5019
Bst2BI CACGAG 2 cut(s) 4725, 5771
Bst6I CTCTTC 9 cut(s) 734, 825, 1197, 1608, 1821, 2301, 4315, 4423, 5364
BstAFI CTTAAG 1 cut(s) 1738
BstAPI GCANNNNNTGC 3 cut(s) 3898, 4654, 4810
BstAUI TGTACA 1 cut(s) 6133
BstBAI YACGTR 2 cut(s) 1271, 3000
BstEII GGTNACC 1 cut(s) 5852
BstFNI CGCG 8 cut(s) 130, 161, 163, 242, 3711, 3952, 5482, 5581
BstH2I RGCGCY 1 cut(s) 1807
BstMAI GTCTC 8 cut(s) 348, 578, 1703, 1805, 3459, 5376, 6101, 6203
BstMCI CGRYCG 3 cut(s) 4276, 5278, 6013
BstNSI RCATGY 6 cut(s) 2191, 2722, 2948, 4460, 5740, 6132
BstPAI GACNNNNGTC 1 cut(s) 1878
BstPI GGTNACC 1 cut(s) 5852
BstSLI GKGCMC 4 cut(s) 1012, 2200, 2571, 5755
BstSNI TACGTA 1 cut(s) 1271
BstUI CGCG 8 cut(s) 130, 161, 163, 242, 3711, 3952, 5482, 5581
BstV2I GAAGAC 5 cut(s) 1376, 2199, 2569, 2960, 3548
BstX2I RGATCY 4 cut(s) 1760, 3653, 4480, 5161
BstXI CCANNNNNNTGG 2 cut(s) 275, 2190
BstYI RGATCY 4 cut(s) 1760, 3653, 4480, 5161
Bsu15I ATCGAT 4 cut(s) 906, 4276, 6009, 6013
BsuI GTATCC 1 cut(s) 5132
BsuTUI ATCGAT 4 cut(s) 906, 4276, 6009, 6013
BtgZI GCGATG 1 cut(s) 1635
BtrI CACGTC 2 cut(s) 1102, 2628
BtsI GCAGTG 4 cut(s) 1917, 2628, 5299, 5608
BveI ACCTGC 1 cut(s) 2116
CaiI CAGNNNCTG 2 cut(s) 4063, 6077
Cfr10I RCCGGY 4 cut(s) 81, 535, 1417, 3188
ClaI ATCGAT 4 cut(s) 906, 4276, 6009, 6013
CseI GACGC 3 cut(s) 231, 3602, 3717
CsiI ACCWGGT 1 cut(s) 5725
CspAI ACCGGT 1 cut(s) 535
CspCI CAANNNNNGTGG 6 cut(s) 2778, 2813, 3009, 3044, 4243, 4278
DraI TTTAAA 1 cut(s) 4045
DraIII CACNNNGTG 1 cut(s) 5729
EaeI YGGCCR 3 cut(s) 79, 3117, 5997
Eam1104I CTCTTC 9 cut(s) 734, 825, 1197, 1608, 1821, 2301, 4315, 4423, 5364
EarI CTCTTC 9 cut(s) 734, 825, 1197, 1608, 1821, 2301, 4315, 4423, 5364
EciI GGCGGA 6 cut(s) 78, 126, 188, 804, 1198, 1274
Ecl136II GAGCTC 5 cut(s) 19, 603, 642, 1207, 3338
Eco105I TACGTA 1 cut(s) 1271
Eco130I CCWWGG 2 cut(s) 119, 5019
Eco147I AGGCCT 2 cut(s) 1914, 3763
Eco24I GRGCYC 6 cut(s) 21, 605, 644, 1209, 3340, 3512
Eco31I GGTCTC 2 cut(s) 578, 6203
Eco32I GATATC 2 cut(s) 4576, 4844
Eco53kI GAGCTC 5 cut(s) 19, 603, 642, 1207, 3338
Eco57I CTGAAG 7 cut(s) 995, 1179, 1590, 2193, 4040, 4560, 5914
Eco72I CACGTG 1 cut(s) 3000
Eco88I CYCGRG 3 cut(s) 95, 218, 6190
Eco91I GGTNACC 1 cut(s) 5852
EcoICRI GAGCTC 5 cut(s) 19, 603, 642, 1207, 3338
EcoO109I RGGNCCY 2 cut(s) 573, 4083
EcoO65I GGTNACC 1 cut(s) 5852
EcoRI GAATTC 1 cut(s) 2803
EcoRV GATATC 2 cut(s) 4576, 4844
EcoT14I CCWWGG 2 cut(s) 119, 5019
EcoT22I ATGCAT 1 cut(s) 3685
EcoT38I GRGCYC 6 cut(s) 21, 605, 644, 1209, 3340, 3512
ErhI CCWWGG 2 cut(s) 119, 5019
Esp3I CGTCTC 1 cut(s) 6101
FalI AAGNNNNNCTT 2 cut(s) 1488, 1520
FaqI GGGAC 6 cut(s) 532, 546, 1974, 4264, 5001, 5300
FauI CCCGC 5 cut(s) 247, 981, 2578, 3304, 5873
FauNDI CATATG 2 cut(s) 4105, 4738
FbaI TGATCA 1 cut(s) 751
FblI GTMKAC 2 cut(s) 959, 1888
FriOI GRGCYC 6 cut(s) 21, 605, 644, 1209, 3340, 3512
FspAI RTGCGCAY 1 cut(s) 1315
FspI TGCGCA 2 cut(s) 597, 1315
GsaI CCCAGC 3 cut(s) 372, 4027, 6058
GsuI CTGGAG 6 cut(s) 628, 1634, 2957, 3246, 3798, 4775
HaeII RGCGCY 1 cut(s) 1807
HgaI GACGC 3 cut(s) 231, 3602, 3717
HincII GTYRAC 4 cut(s) 1068, 1305, 1423, 3344
HindII GTYRAC 4 cut(s) 1068, 1305, 1423, 3344
HindIII AAGCTT 6 cut(s) 62, 1606, 2981, 3247, 5189, 5310
HpaI GTTAAC 1 cut(s) 1305
Hpy99I CGWCG 3 cut(s) 161, 247, 3596
HpyAV CCTTC 9 cut(s) 476, 489, 1932, 2034, 3175, 3326, 4832, 5676, 5805
HpyCH4IV ACGT 8 cut(s) 962, 1101, 1270, 1867, 2627, 2999, 4330, 6110
HpySE526I ACGT 8 cut(s) 962, 1101, 1270, 1867, 2627, 2999, 4330, 6110
Kpn2I TCCGGA 1 cut(s) 5124
KpnI GGTACC 1 cut(s) 3975
Ksp22I TGATCA 1 cut(s) 751
KspAI GTTAAC 1 cut(s) 1305
LguI GCTCTTC 3 cut(s) 1197, 2301, 5364
MabI ACCWGGT 1 cut(s) 5725
MaeII ACGT 8 cut(s) 962, 1101, 1270, 1867, 2627, 2999, 4330, 6110
MbiI CCGCTC 1 cut(s) 4581
MfeI CAATTG 2 cut(s) 4652, 5175
MflI RGATCY 4 cut(s) 1760, 3653, 4480, 5161
MmeI TCCRAC 4 cut(s) 1379, 5115, 5308, 5380
Mph1103I ATGCAT 1 cut(s) 3685
MroI TCCGGA 1 cut(s) 5124
MslI CAYNNNNRTG 4 cut(s) 2188, 3688, 3882, 4725
MspA1I CMGCKG 7 cut(s) 2213, 2573, 3122, 3128, 4798, 6054, 6176
MspCI CTTAAG 1 cut(s) 1738
MunI CAATTG 2 cut(s) 4652, 5175
Mva1269I GAATGC 4 cut(s) 2101, 2447, 2525, 5202
MvnI CGCG 8 cut(s) 130, 161, 163, 242, 3711, 3952, 5482, 5581
NciI CCSGG 4 cut(s) 44, 1706, 2744, 5936
NdeI CATATG 2 cut(s) 4105, 4738
NheI GCTAGC 1 cut(s) 1537
NmeAIII GCCGAG 1 cut(s) 5138
NmuCI GTSAC 7 cut(s) 1880, 2127, 2497, 2623, 2721, 4560, 5768
NsbI TGCGCA 2 cut(s) 597, 1315
NsiI ATGCAT 1 cut(s) 3685
NspI RCATGY 6 cut(s) 2191, 2722, 2948, 4460, 5740, 6132
OliI CACNNNNGTG 1 cut(s) 3882
PaeI GCATGC 1 cut(s) 4460
PaeR7I CTCGAG 1 cut(s) 218
PauI GCGCGC 1 cut(s) 161
PceI AGGCCT 2 cut(s) 1914, 3763
PciI ACATGT 2 cut(s) 2187, 6128
PciSI GCTCTTC 3 cut(s) 1197, 2301, 5364
PcsI WCGNNNNNNNCGW 1 cut(s) 239
PctI GAATGC 4 cut(s) 2101, 2447, 2525, 5202
PflFI GACNNNGTC 1 cut(s) 589
PflMI CCANNNNNTGG 1 cut(s) 614
PfoI TCCNGGA 2 cut(s) 2742, 2973
PinAI ACCGGT 1 cut(s) 535
Ple19I CGATCG 3 cut(s) 4276, 5278, 6013
PmaCI CACGTG 1 cut(s) 3000
PmlI CACGTG 1 cut(s) 3000
Ppu21I YACGTR 2 cut(s) 1271, 3000
PpuMI RGGWCCY 1 cut(s) 4083
PscI ACATGT 2 cut(s) 2187, 6128
PshAI GACNNNNGTC 1 cut(s) 1878
PshBI ATTAAT 2 cut(s) 935, 5406
PsiI TTATAA 1 cut(s) 2841
Psp124BI GAGCTC 5 cut(s) 21, 605, 644, 1209, 3340
Psp5II RGGWCCY 1 cut(s) 4083
PspCI CACGTG 1 cut(s) 3000
PspEI GGTNACC 1 cut(s) 5852
PspFI CCCAGC 3 cut(s) 368, 4023, 6054
PspPPI RGGWCCY 1 cut(s) 4083
PstI CTGCAG 8 cut(s) 1825, 3112, 3127, 3133, 3430, 3751, 5239, 6082
PstNI CAGNNNCTG 2 cut(s) 4063, 6077
PsuI RGATCY 4 cut(s) 1760, 3653, 4480, 5161
PsyI GACNNNGTC 1 cut(s) 589
PteI GCGCGC 1 cut(s) 161
PvuI CGATCG 3 cut(s) 4276, 5278, 6013
PvuII CAGCTG 4 cut(s) 2213, 3128, 4798, 6176
RseI CAYNNNNRTG 4 cut(s) 2188, 3688, 3882, 4725
SacI GAGCTC 5 cut(s) 21, 605, 644, 1209, 3340
SapI GCTCTTC 3 cut(s) 1197, 2301, 5364
SbfI CCTGCAGG 1 cut(s) 1825
SdaI CCTGCAGG 1 cut(s) 1825
SexAI ACCWGGT 1 cut(s) 5725
Sfr274I CTCGAG 1 cut(s) 218
SlaI CTCGAG 1 cut(s) 218
SmiMI CAYNNNNRTG 4 cut(s) 2188, 3688, 3882, 4725
SmlI CTYRAG 6 cut(s) 218, 1738, 1808, 2229, 4001, 4691
SmoI CTYRAG 6 cut(s) 218, 1738, 1808, 2229, 4001, 4691
SnaBI TACGTA 1 cut(s) 1271
SpeI ACTAGT 1 cut(s) 2501
SphI GCATGC 1 cut(s) 4460
Sse8387I CCTGCAGG 1 cut(s) 1825
SseBI AGGCCT 2 cut(s) 1914, 3763
SspI AATATT 2 cut(s) 3103, 4875
SstI GAGCTC 5 cut(s) 21, 605, 644, 1209, 3340
StuI AGGCCT 2 cut(s) 1914, 3763
StyI CCWWGG 2 cut(s) 119, 5019
TaiI ACGT 8 cut(s) 965, 1104, 1273, 1870, 2630, 3002, 4333, 6113
TaqII GACCGA 2 cut(s) 243, 761
TatI WGTACW 3 cut(s) 5083, 5431, 6133
TauI GCSGC 4 cut(s) 527, 3122, 5343, 5999
TseFI GTSAC 7 cut(s) 1880, 2127, 2497, 2623, 2721, 4560, 5768
Tsp45I GTSAC 7 cut(s) 1880, 2127, 2497, 2623, 2721, 4560, 5768
TspGWI ACGGA 5 cut(s) 1165, 3067, 5412, 5562, 6042
Tth111I GACNNNGTC 1 cut(s) 589
Van91I CCANNNNNTGG 1 cut(s) 614
Vha464I CTTAAG 1 cut(s) 1738
VneI GTGCAC 2 cut(s) 2196, 5751
VspI ATTAAT 2 cut(s) 935, 5406
XbaI TCTAGA 1 cut(s) 2516
XceI RCATGY 6 cut(s) 2191, 2722, 2948, 4460, 5740, 6132
XcmI CCANNNNNNNNNTGG 1 cut(s) 2796
XhoI CTCGAG 1 cut(s) 218
XmaJI CCTAGG 1 cut(s) 119
XmiI GTMKAC 2 cut(s) 959, 1888
Zsp2I ATGCAT 1 cut(s) 3685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.