Belongs to the PI3 PI4-kinase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49340 AT1G49340 AT1G49340 AT1G49340 |
| fragaria_vesca | FvH4_2g08470 FvH4_2g08470 |
| malus_domestica | MD05G1068200.v1.1 MD10G1078200.v1.1 |
| prunus_persica | Prupe.8G100100_v2.0.a1 Prupe.8G100100_v2.0.a1 |
| pyrus_communis | pycom10g06150 |
| rosa_chinensis | RchiOBHm_Chr6g0263811 |
| rosa_laevigata | RLG00000014311 |
| rosa_multiflora | Rmu_sc0005300.1_g000009 |
| rosa_roxburghii | Rroxscaffold_176G00431230 Rroxscaffold_7G00203880 |
| rosa_rugosa | Rorug06G0006500 |
| rosa_samantha | Rh6AG125900 Rh6CG120700 Rh6DG108400 |
| rosa_wichuraiana | Rw6G010940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1277 |
| Acc36I | ACCTGC | 1 cut(s) | 922 |
| Acc65I | GGTACC | 1 cut(s) | 5865 |
| AccB1I | GGYRCC | 4 cut(s) | 91, 1510, 2086, 5865 |
| AccBSI | CCGCTC | 4 cut(s) | 255, 800, 4213, 4596 |
| AccI | GTMKAC | 2 cut(s) | 599, 1584 |
| AccII | CGCG | 1 cut(s) | 5593 |
| AcoI | YGGCCR | 1 cut(s) | 801 |
| AcsI | RAATTY | 9 cut(s) | 350, 460, 850, 1200, 2815, 3958, 4153, 4648, 5057 |
| AcuI | CTGAAG | 7 cut(s) | 1185, 1596, 3132, 4055, 4575, 4626, 5926 |
| AcyI | GRCGYC | 2 cut(s) | 92, 560 |
| AflIII | ACRYGT | 3 cut(s) | 972, 1810, 5043 |
| AgeI | ACCGGT | 1 cut(s) | 81 |
| AjiI | CACGTC | 1 cut(s) | 5044 |
| AjnI | CCWGG | 9 cut(s) | 1028, 1266, 2311, 2457, 2973, 3492, 3790, 3953, 5831 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1200, 1232, 2910, 2942 |
| Alw21I | GWGCWC | 9 cut(s) | 21, 42, 153, 611, 1423, 3025, 3195, 5448, 5767 |
| Alw44I | GTGCAC | 1 cut(s) | 5763 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 640, 1273, 4078, 4825, 6085 |
| Ama87I | CYCGRG | 4 cut(s) | 120, 3343, 4740, 5987 |
| ApaLI | GTGCAC | 1 cut(s) | 5763 |
| ApoI | RAATTY | 9 cut(s) | 350, 460, 850, 1200, 2815, 3958, 4153, 4648, 5057 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 754, 786 |
| AseI | ATTAAT | 1 cut(s) | 5418 |
| AsiGI | ACCGGT | 1 cut(s) | 81 |
| Asp718I | GGTACC | 1 cut(s) | 5865 |
| AspA2I | CCTAGG | 1 cut(s) | 106 |
| AspLEI | GCGC | 6 cut(s) | 94, 1278, 3808, 4044, 4405, 5593 |
| AsuC2I | CCSGG | 3 cut(s) | 44, 2756, 5739 |
| AsuII | TTCGAA | 2 cut(s) | 5583, 5757 |
| AsuNHI | GCTAGC | 1 cut(s) | 1847 |
| AvaI | CYCGRG | 4 cut(s) | 120, 3343, 4740, 5987 |
| AvaII | GGWCC | 7 cut(s) | 514, 1407, 1967, 2186, 3708, 5299, 6054 |
| AvrII | CCTAGG | 1 cut(s) | 106 |
| AxyI | CCTNAGG | 1 cut(s) | 980 |
| BaeGI | GKGCMC | 1 cut(s) | 5767 |
| BanI | GGYRCC | 4 cut(s) | 91, 1510, 2086, 5865 |
| BanII | GRGCYC | 8 cut(s) | 21, 611, 1018, 1423, 3318, 3527, 3671, 4017 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 1158, 1190, 2143, 2175, 3721, 3753 |
| BauI | CACGAG | 1 cut(s) | 5699 |
| BbsI | GAAGAC | 9 cut(s) | 684, 1382, 1532, 2575, 2631, 2972, 3563, 4061, 4089 |
| Bbv12I | GWGCWC | 9 cut(s) | 21, 42, 153, 611, 1423, 3025, 3195, 5448, 5767 |
| BbvCI | CCTCAGC | 1 cut(s) | 2679 |
| BceAI | ACGGC | 7 cut(s) | 140, 594, 1298, 2304, 2564, 2620, 5393 |
| BciT130I | CCWGG | 9 cut(s) | 1030, 1268, 2313, 2459, 2975, 3494, 3792, 3955, 5833 |
| BclI | TGATCA | 3 cut(s) | 498, 748, 4288 |
| BcnI | CCSGG | 3 cut(s) | 44, 2756, 5739 |
| BfoI | RGCGCY | 2 cut(s) | 95, 3809 |
| BfuAI | ACCTGC | 1 cut(s) | 922 |
| BlnI | CCTAGG | 1 cut(s) | 106 |
| BlpI | GCTNAGC | 2 cut(s) | 36, 5777 |
| BmcAI | AGTACT | 3 cut(s) | 1864, 3199, 4767 |
| Bme18I | GGWCC | 7 cut(s) | 514, 1407, 1967, 2186, 3708, 5299, 6054 |
| BmeT110I | CYCGRG | 4 cut(s) | 120, 3343, 4740, 5987 |
| BmgBI | CACGTC | 1 cut(s) | 5044 |
| BmrI | ACTGGG | 3 cut(s) | 927, 3674, 4687 |
| BmtI | GCTAGC | 1 cut(s) | 1851 |
| BmuI | ACTGGG | 3 cut(s) | 927, 3674, 4687 |
| BoxI | GACNNNNGTC | 2 cut(s) | 84, 1884 |
| BpiI | GAAGAC | 9 cut(s) | 684, 1382, 1532, 2575, 2631, 2972, 3563, 4061, 4089 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 3539, 3571, 5160, 5192 |
| BpmI | CTGGAG | 6 cut(s) | 399, 1407, 2480, 3258, 4704, 4790 |
| Bpu10I | CCTNAGC | 2 cut(s) | 809, 2679 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 36, 5777 |
| Bpu14I | TTCGAA | 2 cut(s) | 5583, 5757 |
| BpuEI | CTTGAG | 2 cut(s) | 4001, 4727 |
| BpuMI | CCSGG | 3 cut(s) | 44, 2756, 5739 |
| BsaAI | YACGTR | 1 cut(s) | 973 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2007, 3286, 4293 |
| BsaHI | GRCGYC | 2 cut(s) | 92, 560 |
| BsaI | GGTCTC | 2 cut(s) | 138, 5946 |
| BsaWI | WCCGGW | 3 cut(s) | 81, 553, 4086 |
| Bse118I | RCCGGY | 2 cut(s) | 81, 368 |
| Bse21I | CCTNAGG | 1 cut(s) | 980 |
| Bse3DI | GCAATG | 7 cut(s) | 544, 1362, 1842, 2341, 2412, 3618, 4610 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2007, 3286, 4293 |
| BseBI | CCWGG | 9 cut(s) | 1030, 1268, 2313, 2459, 2975, 3494, 3792, 3955, 5833 |
| BseJI | GATNNNNATC | 3 cut(s) | 2007, 3286, 4293 |
| BseMI | GCAATG | 7 cut(s) | 544, 1362, 1842, 2341, 2412, 3618, 4610 |
| BseRI | GAGGAG | 2 cut(s) | 232, 2235 |
| BseSI | GKGCMC | 1 cut(s) | 5767 |
| BseYI | CCCAGC | 2 cut(s) | 3323, 5576 |
| BsgI | GTGCAG | 4 cut(s) | 1541, 3282, 4838, 6016 |
| Bsh1236I | CGCG | 1 cut(s) | 5593 |
| Bsh1285I | CGRYCG | 3 cut(s) | 82, 253, 5290 |
| BshNI | GGYRCC | 4 cut(s) | 91, 1510, 2086, 5865 |
| BshTI | ACCGGT | 1 cut(s) | 81 |
| BsiEI | CGRYCG | 3 cut(s) | 82, 253, 5290 |
| BsiHKAI | GWGCWC | 9 cut(s) | 21, 42, 153, 611, 1423, 3025, 3195, 5448, 5767 |
| BsiHKCI | CYCGRG | 4 cut(s) | 120, 3343, 4740, 5987 |
| BslFI | GGGAC | 5 cut(s) | 1458, 3952, 4746, 5243, 5312 |
| BsmBI | CGTCTC | 1 cut(s) | 4186 |
| BsmFI | GGGAC | 5 cut(s) | 1458, 3952, 4746, 5243, 5312 |
| BsmI | GAATGC | 6 cut(s) | 1458, 2302, 2453, 2531, 4975, 5133 |
| Bso31I | GGTCTC | 2 cut(s) | 138, 5946 |
| BsoBI | CYCGRG | 4 cut(s) | 120, 3343, 4740, 5987 |
| Bsp119I | TTCGAA | 2 cut(s) | 5583, 5757 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 36, 5777 |
| BspFNI | CGCG | 1 cut(s) | 5593 |
| BspMAI | CTGCAG | 6 cut(s) | 963, 1831, 3124, 3145, 3445, 4333 |
| BspMI | ACCTGC | 1 cut(s) | 922 |
| BspOI | GCTAGC | 1 cut(s) | 1851 |
| BspQI | GCTCTTC | 3 cut(s) | 1203, 2307, 5376 |
| BspT104I | TTCGAA | 2 cut(s) | 5583, 5757 |
| BspT107I | GGYRCC | 4 cut(s) | 91, 1510, 2086, 5865 |
| BspTNI | GGTCTC | 2 cut(s) | 138, 5946 |
| BsrBI | CCGCTC | 4 cut(s) | 255, 800, 4213, 4596 |
| BsrDI | GCAATG | 7 cut(s) | 544, 1362, 1842, 2341, 2412, 3618, 4610 |
| BsrFI | RCCGGY | 2 cut(s) | 81, 368 |
| BssAI | RCCGGY | 2 cut(s) | 81, 368 |
| BssNI | GRCGYC | 2 cut(s) | 92, 560 |
| BssSI | CACGAG | 1 cut(s) | 5699 |
| BssT1I | CCWWGG | 4 cut(s) | 106, 1348, 1410, 5031 |
| Bst2BI | CACGAG | 1 cut(s) | 5699 |
| Bst2UI | CCWGG | 9 cut(s) | 1030, 1268, 2313, 2459, 2975, 3494, 3792, 3955, 5833 |
| BstACI | GRCGYC | 2 cut(s) | 92, 560 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 3913, 4669, 4825 |
| BstBAI | YACGTR | 1 cut(s) | 973 |
| BstBI | TTCGAA | 2 cut(s) | 5583, 5757 |
| BstEII | GGTNACC | 1 cut(s) | 626 |
| BstFNI | CGCG | 1 cut(s) | 5593 |
| BstH2I | RGCGCY | 2 cut(s) | 95, 3809 |
| BstHHI | GCGC | 6 cut(s) | 94, 1278, 3808, 4044, 4405, 5593 |
| BstMCI | CGRYCG | 3 cut(s) | 82, 253, 5290 |
| BstNI | CCWGG | 9 cut(s) | 1030, 1268, 2313, 2459, 2975, 3494, 3792, 3955, 5833 |
| BstNSI | RCATGY | 1 cut(s) | 1173 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 84, 1884 |
| BstPI | GGTNACC | 1 cut(s) | 626 |
| BstSLI | GKGCMC | 1 cut(s) | 5767 |
| BstUI | CGCG | 1 cut(s) | 5593 |
| BstV2I | GAAGAC | 9 cut(s) | 684, 1382, 1532, 2575, 2631, 2972, 3563, 4061, 4089 |
| BstX2I | RGATCY | 3 cut(s) | 1766, 4495, 5173 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 1126, 2196, 3389, 5891 |
| BstYI | RGATCY | 3 cut(s) | 1766, 4495, 5173 |
| Bsu36I | CCTNAGG | 1 cut(s) | 980 |
| BtrI | CACGTC | 1 cut(s) | 5044 |
| BtsI | GCAGTG | 7 cut(s) | 153, 691, 3294, 5105, 5237, 5620, 6057 |
| BveI | ACCTGC | 1 cut(s) | 922 |
| CaiI | CAGNNNCTG | 5 cut(s) | 640, 1273, 4078, 4825, 6085 |
| CfoI | GCGC | 6 cut(s) | 94, 1278, 3808, 4044, 4405, 5593 |
| Cfr10I | RCCGGY | 2 cut(s) | 81, 368 |
| CseI | GACGC | 2 cut(s) | 568, 678 |
| CspAI | ACCGGT | 1 cut(s) | 81 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1166, 1201, 2790, 2825 |
| DinI | GGCGCC | 1 cut(s) | 93 |
| DraI | TTTAAA | 3 cut(s) | 2040, 4060, 4242 |
| EaeI | YGGCCR | 1 cut(s) | 801 |
| EciI | GGCGGA | 5 cut(s) | 188, 804, 810, 1204, 1280 |
| Ecl136II | GAGCTC | 3 cut(s) | 19, 609, 1421 |
| Eco130I | CCWWGG | 4 cut(s) | 106, 1348, 1410, 5031 |
| Eco147I | AGGCCT | 3 cut(s) | 1920, 3176, 3778 |
| Eco24I | GRGCYC | 8 cut(s) | 21, 611, 1018, 1423, 3318, 3527, 3671, 4017 |
| Eco31I | GGTCTC | 2 cut(s) | 138, 5946 |
| Eco32I | GATATC | 1 cut(s) | 4859 |
| Eco47I | GGWCC | 7 cut(s) | 514, 1407, 1967, 2186, 3708, 5299, 6054 |
| Eco53kI | GAGCTC | 3 cut(s) | 19, 609, 1421 |
| Eco57I | CTGAAG | 7 cut(s) | 1185, 1596, 3132, 4055, 4575, 4626, 5926 |
| Eco81I | CCTNAGG | 1 cut(s) | 980 |
| Eco88I | CYCGRG | 4 cut(s) | 120, 3343, 4740, 5987 |
| Eco91I | GGTNACC | 1 cut(s) | 626 |
| EcoICRI | GAGCTC | 3 cut(s) | 19, 609, 1421 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1270, 4098 |
| EcoO65I | GGTNACC | 1 cut(s) | 626 |
| EcoRI | GAATTC | 2 cut(s) | 350, 2815 |
| EcoRII | CCWGG | 9 cut(s) | 1028, 1266, 2311, 2457, 2973, 3492, 3790, 3953, 5831 |
| EcoRV | GATATC | 1 cut(s) | 4859 |
| EcoT14I | CCWWGG | 4 cut(s) | 106, 1348, 1410, 5031 |
| EcoT22I | ATGCAT | 1 cut(s) | 3700 |
| EcoT38I | GRGCYC | 8 cut(s) | 21, 611, 1018, 1423, 3318, 3527, 3671, 4017 |
| EgeI | GGCGCC | 1 cut(s) | 93 |
| EheI | GGCGCC | 1 cut(s) | 93 |
| ErhI | CCWWGG | 4 cut(s) | 106, 1348, 1410, 5031 |
| Esp3I | CGTCTC | 1 cut(s) | 4186 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 5349, 5381 |
| FaqI | GGGAC | 5 cut(s) | 1458, 3952, 4746, 5243, 5312 |
| FauI | CCCGC | 1 cut(s) | 4206 |
| FauNDI | CATATG | 2 cut(s) | 4753, 5437 |
| FbaI | TGATCA | 3 cut(s) | 498, 748, 4288 |
| FblI | GTMKAC | 2 cut(s) | 599, 1584 |
| FriOI | GRGCYC | 8 cut(s) | 21, 611, 1018, 1423, 3318, 3527, 3671, 4017 |
| FspI | TGCGCA | 1 cut(s) | 1277 |
| GlaI | GCGC | 6 cut(s) | 93, 1277, 3807, 4043, 4404, 5592 |
| GsaI | CCCAGC | 2 cut(s) | 3327, 5580 |
| GsuI | CTGGAG | 6 cut(s) | 399, 1407, 2480, 3258, 4704, 4790 |
| HaeII | RGCGCY | 2 cut(s) | 95, 3809 |
| HgaI | GACGC | 2 cut(s) | 568, 678 |
| HhaI | GCGC | 6 cut(s) | 94, 1278, 3808, 4044, 4405, 5593 |
| Hin1I | GRCGYC | 2 cut(s) | 92, 560 |
| Hin6I | GCGC | 6 cut(s) | 92, 1276, 3806, 4042, 4403, 5591 |
| HinP1I | GCGC | 6 cut(s) | 92, 1276, 3806, 4042, 4403, 5591 |
| HincII | GTYRAC | 3 cut(s) | 1074, 2694, 5017 |
| HindII | GTYRAC | 3 cut(s) | 1074, 2694, 5017 |
| HindIII | AAGCTT | 8 cut(s) | 62, 1612, 1751, 2993, 3947, 5201, 5322, 5774 |
| Hpy99I | CGWCG | 7 cut(s) | 161, 215, 308, 392, 2325, 5127, 5883 |
| HpyCH4IV | ACGT | 9 cut(s) | 972, 1537, 1810, 2470, 3602, 3724, 3744, 5043, 5122 |
| HpySE526I | ACGT | 9 cut(s) | 972, 1537, 1810, 2470, 3602, 3724, 3744, 5043, 5122 |
| Hsp92I | GRCGYC | 2 cut(s) | 92, 560 |
| HspAI | GCGC | 6 cut(s) | 92, 1276, 3806, 4042, 4403, 5591 |
| KasI | GGCGCC | 1 cut(s) | 91 |
| KpnI | GGTACC | 1 cut(s) | 5869 |
| KroI | GCCGGC | 1 cut(s) | 368 |
| KroNI | GCCGGC | 1 cut(s) | 370 |
| Ksp22I | TGATCA | 3 cut(s) | 498, 748, 4288 |
| LguI | GCTCTTC | 3 cut(s) | 1203, 2307, 5376 |
| MaeII | ACGT | 9 cut(s) | 972, 1537, 1810, 2470, 3602, 3724, 3744, 5043, 5122 |
| MbiI | CCGCTC | 4 cut(s) | 255, 800, 4213, 4596 |
| MfeI | CAATTG | 1 cut(s) | 5795 |
| MflI | RGATCY | 3 cut(s) | 1766, 4495, 5173 |
| Mly113I | GGCGCC | 1 cut(s) | 92 |
| MmeI | TCCRAC | 6 cut(s) | 1385, 2268, 5127, 5320, 5392, 5572 |
| Mph1103I | ATGCAT | 1 cut(s) | 3700 |
| MroNI | GCCGGC | 1 cut(s) | 368 |
| MslI | CAYNNNNRTG | 6 cut(s) | 2194, 3703, 4001, 4260, 5307, 5889 |
| MspA1I | CMGCKG | 7 cut(s) | 640, 958, 1928, 3140, 4226, 4567, 4669 |
| MunI | CAATTG | 1 cut(s) | 5795 |
| Mva1269I | GAATGC | 6 cut(s) | 1458, 2302, 2453, 2531, 4975, 5133 |
| MvaI | CCWGG | 9 cut(s) | 1030, 1268, 2313, 2459, 2975, 3494, 3792, 3955, 5833 |
| MvnI | CGCG | 1 cut(s) | 5593 |
| NaeI | GCCGGC | 1 cut(s) | 370 |
| NarI | GGCGCC | 1 cut(s) | 92 |
| NciI | CCSGG | 3 cut(s) | 44, 2756, 5739 |
| NdeI | CATATG | 2 cut(s) | 4753, 5437 |
| NgoMIV | GCCGGC | 1 cut(s) | 368 |
| NheI | GCTAGC | 1 cut(s) | 1847 |
| NmeAIII | GCCGAG | 2 cut(s) | 514, 3397 |
| NmuCI | GTSAC | 6 cut(s) | 124, 556, 760, 2501, 2896, 4575 |
| NsbI | TGCGCA | 1 cut(s) | 1277 |
| NsiI | ATGCAT | 1 cut(s) | 3700 |
| NspI | RCATGY | 1 cut(s) | 1173 |
| NspV | TTCGAA | 2 cut(s) | 5583, 5757 |
| PaeR7I | CTCGAG | 1 cut(s) | 4740 |
| PceI | AGGCCT | 3 cut(s) | 1920, 3176, 3778 |
| PciSI | GCTCTTC | 3 cut(s) | 1203, 2307, 5376 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 593 |
| PctI | GAATGC | 6 cut(s) | 1458, 2302, 2453, 2531, 4975, 5133 |
| PdiI | GCCGGC | 1 cut(s) | 370 |
| PfeI | GAWTC | 6 cut(s) | 1931, 2831, 2858, 3517, 4940, 5215 |
| PflFI | GACNNNGTC | 3 cut(s) | 130, 287, 595 |
| PfoI | TCCNGGA | 2 cut(s) | 2457, 2754 |
| PinAI | ACCGGT | 1 cut(s) | 81 |
| Ple19I | CGATCG | 1 cut(s) | 5290 |
| PluTI | GGCGCC | 1 cut(s) | 95 |
| Ppu21I | YACGTR | 1 cut(s) | 973 |
| PshAI | GACNNNNGTC | 2 cut(s) | 84, 1884 |
| PshBI | ATTAAT | 1 cut(s) | 5418 |
| Psp124BI | GAGCTC | 3 cut(s) | 21, 611, 1423 |
| Psp6I | CCWGG | 9 cut(s) | 1028, 1266, 2311, 2457, 2973, 3492, 3790, 3953, 5831 |
| PspEI | GGTNACC | 1 cut(s) | 626 |
| PspFI | CCCAGC | 2 cut(s) | 3323, 5576 |
| PspGI | CCWGG | 9 cut(s) | 1028, 1266, 2311, 2457, 2973, 3492, 3790, 3953, 5831 |
| PspXI | VCTCGAGB | 1 cut(s) | 4740 |
| PstI | CTGCAG | 6 cut(s) | 963, 1831, 3124, 3145, 3445, 4333 |
| PstNI | CAGNNNCTG | 5 cut(s) | 640, 1273, 4078, 4825, 6085 |
| PsuI | RGATCY | 3 cut(s) | 1766, 4495, 5173 |
| PsyI | GACNNNGTC | 3 cut(s) | 130, 287, 595 |
| PvuI | CGATCG | 1 cut(s) | 5290 |
| PvuII | CAGCTG | 7 cut(s) | 640, 958, 1928, 3140, 4226, 4567, 4669 |
| RseI | CAYNNNNRTG | 6 cut(s) | 2194, 3703, 4001, 4260, 5307, 5889 |
| SacI | GAGCTC | 3 cut(s) | 21, 611, 1423 |
| SapI | GCTCTTC | 3 cut(s) | 1203, 2307, 5376 |
| SbfI | CCTGCAGG | 1 cut(s) | 1831 |
| ScaI | AGTACT | 3 cut(s) | 1864, 3199, 4767 |
| SdaI | CCTGCAGG | 1 cut(s) | 1831 |
| SfoI | GGCGCC | 1 cut(s) | 93 |
| Sfr274I | CTCGAG | 1 cut(s) | 4740 |
| SfuI | TTCGAA | 2 cut(s) | 5583, 5757 |
| SinI | GGWCC | 7 cut(s) | 514, 1407, 1967, 2186, 3708, 5299, 6054 |
| SlaI | CTCGAG | 1 cut(s) | 4740 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 2194, 3703, 4001, 4260, 5307, 5889 |
| SmlI | CTYRAG | 3 cut(s) | 4016, 4706, 4740 |
| SmoI | CTYRAG | 3 cut(s) | 4016, 4706, 4740 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1831 |
| SseBI | AGGCCT | 3 cut(s) | 1920, 3176, 3778 |
| SspDI | GGCGCC | 1 cut(s) | 91 |
| SspI | AATATT | 2 cut(s) | 3115, 3752 |
| SstI | GAGCTC | 3 cut(s) | 21, 611, 1423 |
| StuI | AGGCCT | 3 cut(s) | 1920, 3176, 3778 |
| StyI | CCWWGG | 4 cut(s) | 106, 1348, 1410, 5031 |
| TaiI | ACGT | 9 cut(s) | 975, 1540, 1813, 2473, 3605, 3727, 3747, 5046, 5125 |
| TaqII | GACCGA | 1 cut(s) | 120 |
| TatI | WGTACW | 4 cut(s) | 1862, 3197, 4765, 5095 |
| TauI | GCSGC | 9 cut(s) | 789, 803, 1660, 3137, 3811, 4996, 5355, 5591, 6011 |
| TfiI | GAWTC | 6 cut(s) | 1931, 2831, 2858, 3517, 4940, 5215 |
| TseFI | GTSAC | 6 cut(s) | 124, 556, 760, 2501, 2896, 4575 |
| Tsp45I | GTSAC | 6 cut(s) | 124, 556, 760, 2501, 2896, 4575 |
| TspGWI | ACGGA | 9 cut(s) | 199, 423, 3079, 3185, 3467, 3557, 4168, 5509, 6014 |
| Tth111I | GACNNNGTC | 3 cut(s) | 130, 287, 595 |
| VneI | GTGCAC | 1 cut(s) | 5763 |
| VpaK11BI | GGWCC | 7 cut(s) | 514, 1407, 1967, 2186, 3708, 5299, 6054 |
| VspI | ATTAAT | 1 cut(s) | 5418 |
| XapI | RAATTY | 9 cut(s) | 350, 460, 850, 1200, 2815, 3958, 4153, 4648, 5057 |
| XbaI | TCTAGA | 1 cut(s) | 2522 |
| XceI | RCATGY | 1 cut(s) | 1173 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2808, 5555 |
| XhoI | CTCGAG | 1 cut(s) | 4740 |
| XmaJI | CCTAGG | 1 cut(s) | 106 |
| XmiI | GTMKAC | 2 cut(s) | 599, 1584 |
| ZrmI | AGTACT | 3 cut(s) | 1864, 3199, 4767 |
| Zsp2I | ATGCAT | 1 cut(s) | 3700 |