Rroxscaffold_7G00203880

Belongs to the PI3 PI4-kinase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
52909387 .. 52926431
17045 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00203880.1

Sequence Viewer

Length: 5964 bp
ATGGAGTCTCTGATGGAGCTCTGCGACCTAATTGCGGAGCACCCGGCCCAATTCTCCGAGAAGCTTTCGTGGATATGCGACCGGTGTCCGGTGCCGGAGTCTCTCCTAGGCAGATCGCCTCGGGTGACCCGGTCTCAGCTCAATGCCGTGCTCGCCGTCGCTCGCTTTCTCTCCAAATGCCCCGATTGGGCCGATCTCCGCCCCAAGTCCGTCGTCGTCGAGTTTCTTCGCTCCATTCCCTCCTCCTTCGACCGCTCCTTTTGGCCTCAGTCCTTCGGAACCGACTTGATCGCTTCATTTTTCGTTGATTTTCTTGGATATGTGTCGAAAGCCACCGAATTGTCGCCGGAATTCGCTGGCGAGATAGCCGGCTTCTCTGGAGAGGTCATCGTTTCAGCGATTAGCAACGGAGGCGAAGATTTAGGGATTTCTAGGGCTTTTCTAATGGCTCTGTCGCAGAATTTCCCTCCAATTTTGCCTCTGGATGCCGAGAAGCTGATCATGATGCTAATGGACCAGTTTGCGGTGGTTTCCGGCAATGTAGCTCAGTCTCCGGTGACGCCTAGAGGTCAAAATACGGCGAACTCGGAGACTTCGTCGACGCAGAGCTCGCCGATGAATAATGGTAACCATCAGCAGGCGAATGAAAGTAATGAGAGTGGGGTTGATCAGTTGGGAGTGACTTTTGGTTTGAATGATGGAGGCGGCGGAGGCGGAGCGGCCATGCTTAGGCAGCAAGTTGCTCAATTTGAGGAAGAGTCTGTGGAAAATTTGGAGAAGCAAGAGGTTGCTTTCAAATTGATTGCTCATATTTTGGAAAAAGCTCACATTGATACTGGGCTTTTGGAGCAGGTTAGACTAATTTCAAAGAGGCAGCTGCAGTCTATGTACGTGTTCCTGAGGATTAGGAAGCGAGATTGGACTGAACATGGGGCTCTCTTAAAAGCCAGGATCAATACGAAGCTGTCAGTTTATCAAGCTGCTGTCAAGTTGACTCTTAATTGCCTTGCTTGCTTTGATACTGATGGGAAATCAGCCAAGAAATTGGCACATGAGACTGTTGCGTTATTGATGGAAGCTGCTGAAGCGTGTTTACAATCTGTGTGGCGGAAGATGCGAATTTGTGAAGAGCTCTTTGGTTGTTTGTTGTCTGGGCTTTCCCAAATTGCTGTCAAACGGGGAGGCCAGGCCCTGCGCATTTTGCTCATCCGCCTCAAACCGGTTGTGTTAGCCGTATGCACTCAGGCTGATACTTGGGCAAGCAGCCAAGGAGCGATGTTTGAGAGTGTATTGAAGACAAGTTGTGAGATAATTGAGTCATGTTGGACCAAGGAGCGAGCTCCAGTCGATACATTCATAATGGGACTAGCTACAAGCATTCGTGAACGAAATGATTATGAGGAACAGGGTGATAAAGACAAAGAGGCGGTGCCTGTTGTGCAGCTTAATGTTGTACGTCTGCTAGCTGATCTGAATGTTGCTGTTAAGAAGTCTGAAGTTGTAGACATGATATTACCTCTATTTATTGAAAGCTTAGAAGAGGGTGATGCAACAACTCCTAGTTTATTGCGACTGCGGCTCCTTGATGCTGTATCACGCATGGCAAGTTTAGGTTTTGAGAAATCCTACCGTGAGACTGTTGTTCTAATGACAAGGAGTTACTTGAATAAGCTTTCAAGTTTGGGATCTGCTGATAGCAAAACTGTTCCACAAGAAGCGACAACAGAACGTGTTGAGACTCTTCCTGCAGGATTTCTACTCATTGCTAGTGGTCTTACAAGTACTAAATTGCGTTCAGACTATCGTCATCGTTTGCTATCTTTATGCTCAGATGTAGGCCTAGCAGCTGAATCCAAAAGCGGAAGGAGTGGAGCAGATTTTCTGGGTCCATTACTTCCTGCTGTAGCTGAAATATGCTCTGATTTTGATCCTACAGTAGATGTGGAGCCTTCACTTTTAAAGTTATTTCGCAACTTGTGGTTCTATGTTGCTCTTTTTGGCTTGGCACCTCCTATACAGAAGGTTCAACAACCTCTGAAACAAGTATCAACTACACTGAACAGTGTGGGAAGCATGGGTGCAATTCCTCTTCAAGCTGTGGGTGGACCATATATGTGGAATACACAATGGTCTTTTGCTGTTCAGAGAATTGCACAAGGAACTCCTCCACTTGTTGTTAGCTCTGTGAAGTGGCTTGAAGATGAGTTGGAACTGAATGCTCTTCACAACCCTGGCAGTCGTCGAGGGAATGGCAATGAGAAAGCTGCTTTAGCTCAACGAGCTGCCCTTTCTACTGCTCTAGGAGGGCGAGTTGATGTTGCAGCAATGACCACTATATCAGGAGTGAAGGCTACCTATCTTCTTGCGGTGGCATTCCTGGAGATTATACGTTTCAGCAGCAACGGTGGCATCCTGAATGGTGACTCTAGCTCAACTGCTTCTAGAAGTGCATTCAGTTGCGTATTTGAATACCTGAAAACTCCAAATCTCATGCCTGCCGTCTTCCAATGTTTGATGGCAACTGTCCATAGGGCTTTTGAAACAGCAGTTTTATGGCTGGAAGATCGAATATCTGAAACAGGAAATGAAGCTGAGAGAGAGGAACACATTCGCGAGGTTTCTGTGAACTTGCTGACTCAGCTTAGAGATAAGTTTCCACAGGTCTTGTGGAATTCATCGTGTGTTGATTCCCTGCTATTCTCAATTCATAATGATTCGCCTTCTATTGTTGTCAATGATCCTGCTTGGGTGGTGACTGTTCGTTCTTTATACCAAAAGATTGTTCGAGAGTGGATCATTAAATCACTTTCATATGCTCCTTGCTCTAGCCAGGGTCTTCTACAGGAAAAGCTTTGTAAAGCAAACACGTGGCAAAGAGCACAGCATACACCTGATGTGGTTTCTCTTTTATCTGAGATACGGATTGGCACAGGTAAAACTGATTGCTGGAATGGCATACAAACAGCAAATATTCCTGCAGTTATGGCTGCTGCAGCTGCAGCTTCAGGAGGCAACTTAAAATTAACGGAGGCCTTCAATTTGGAAGTGCTCAGTACTGGTATCGTCAGTGCAACAATGAAATGCAACCATGCTGGAGAAATCGCCGGAATGAGAAGGTTGTATAACAGCATGGGTGGATTTCAATCTGGCACTGCACCAACTGGATTTGGGCTCGGTGCTGGGCTTCAAAGGTTGATCTCGGGAGCATTTCCCCAACAGACACAAGCCGAGGATGACCAATTTAATGGGATGTTGCTCACAAAGTTTGTGCGTTTACTACAACAATTTGTTAATGCTGCAGAGAAAGGATGGGAAGTGGAGAAGTCTCAATTCCGTGAGACTTGTTCTCAGGCAACTGCATTACTTCTGTCGAATCTGGGCTCTAATTCAAAATCAAATGTGGAGGGCTTCTCACAACTTCTCCGTCTTCTCTGTTGGTGTCCTGCTTATATTTCTACGTCAGATGCAATGGAAACTGGTGTATTCATTTGGACTTGGTTGGTTTCTTCTGCTCCTGAACTGGGCTCCCTAGTCCTTGCGGAGCTTGTTGATGCATGGTTATGGACCATTGATACAAAACGTGGTATCTTTGCTTCTGACGTAAAATATTCTGGGCCTGCTGCAAAGTTAAGGCCTCAACTTTCTCCCGGTGAGCCAGAAGCGCTGCCTGAATTTGATCCTGTTGAGCAAATAATGGCTCATAGATTATGGCTTGGATTTTTCATTGATCGCTTTGAGGTAGTTCGACACAATAGTATTGAGCAACTCTTGCTTCTTGGTCGAATGTTACAAGGGACGACAAAACTTCCCTGGAATTTTTCACACCATCCTGCTGCTACTGGTACATTTTTCACTGTCATGCTTCTTGGGCTCAAGTTCTGCTCATGTCAATCGCAGCGCAATTTGCAGAACTTTAAAACAGGTCTTCAGTTGCTGGAAGACCGGATTTATAGGGCCTCTTTGGGATGGTTTGCTTTTGAGCCTGAATGGTATGACACAAGCTATATGAATTTTACTCAGAGTGAAGCTCAATCCATCTCTGCATTTGTCCACTACCTTTCAAATGAGCGGGCAGATGCAGCTGTGCAATCGGATTTAAAAGGAAGAGGACATGAAAATGGGAACCGTTTGGTTGATGCGAATGATCAATATCACCCTGTCTGGGGTCAGATGGAGAACTATGCTGCAGGAAGAGAAAAACGAAAACAGCTACTCTTGATGCTATGCCAGTATGAGGCTGACAGGCTTGAAGTCTGGGCGCAACCCACTAATACTAAGGAGACTTCAACTTCTAAGCAAAAAATTAGTTCGGAGAAATGGATTGAATATGCTAGGACTGCCTTTTCTGTAGATCCTCGAATTGCTTTATCTTTGGCAAAGAGGTTCCCAACAAACACATTCTTGAAGGCTGAAGTAACTCAGCTGGTTCAGTCGCATATATTGGACATCCGCTCCATTCCTGAAGCATTGCCATATTTTGTTACCCCAAAGGCCGTTGATGAAAATTCAGCACTTTTGCAACAGTTGCCACACTGGGCTGCGTGTTCAATCACACAAGCTCTTGAGTTTCTTACTCCAGCATATAAGGGACATCCTCGAGTCATGGCATATGTTCTTAGAGTACTGGAGTCTTATCCTCCTGAACGAGTAACTTTCTTCATGCCACAGCTAGTGCAGGCTCTGCGGTATGATGAAGAGAAATTAGTGGAAGGATATCTGCTTAGAGCCACCCAACGAAGTGATATATTTGCCCATATTTTAATCTGGCACTTACAGGGTGAGACGGAAGTTCCAGAATCAGGACAAGAGGCTGTGTCTGCCAAGAATGCTGCATTTCAAGCATTGTTGCCGCAAGTTAGACAGCATATTGTTGACGGTTTTAATCCCAAGGCACTAGACGTGTTTCAGAGAGAATTTGATTTCTTTGACAAGGTTACATCTATTTCTGGTGTACTTTTCCCACTGCCGAAGGATGAACGTCGAGCTGGCATTCGGAGAGAGTTGGAGAAAATTGAAGTGATGGGAGAGGATCTCTATTTACCAACTGCTCCTAACAAGCTTGTCAGGGGGATTCAGGTAGATAGTGGAATACCATTGCAATCAGCAGCAAAAGTCCCTATAATGATAACATTTAATGTTGTCGATCGGGGTGGGGACCACAATGATGTAAAGCCACAAGCCTGTATTTTTAAGGTTGGAGATGATTGCCGCCAAGATGTTCTTGCTCTTCAAGTGATTTCACTTCTTAGAGACATATTTGAAGCTGTTGGAATTAATCTTTATTTGTTTCCATATGGTGTGCTCCCAACTGGCCCAGAAAGAGGAATAATTGAGGTTGTACCAAATACACGAAGTAGAAGTCAGATGGGTGAAACTACTGATGGTGGTTTGTATGAGATTTTCCAACAGGACTACGGAACTGTTGGCTCTCCCAGCTTCGAGGCGGCGCGTGAAAACTTCATCGTTAGCAGTGCTGGTTATGCAGTTGCCAGCCTTTTACTTCAACCAAAGGATAGGCACAATGGCAATCTTTTGTTTGACAATGTGGGAAGGCTCGTGCATATTGATTTTGGTTTCATCCTGGAAACTTCTCCGGGTGGAAATATGCGTTTCGAAAGTGCACACTTTAAGCTTAGCCATGAGATGACACAATTGCTAGACCCTTCTGGGGTTATGAAGAGTGATACCTGGAACCAGTTTGTGAGCTTGTGCGTGAAGGGTTACCTTGCTGCCCGTCGCCACATGGATGGGATCATTAGCACGGTGGCGTTAATGCTAGACAGTGGACTGCCTTGCTTCAGCAGGGGAGACCCTATTGGAAATCTTCGCAAGAGATTTCATCCCGAGATGAGTGAGCGTGAAGCGGCTAATTTTATGATCCGTGTCTGCACAGATGCCTACAACAAATGGACCACTGCTGGCTATGACTTGATACAGTATCTGCAACAAGGTATTGAAAAGTAA

Protein Analysis

1987

Amino Acids

220.01

Weight (kDa)

5.8

Isoelectric Point (pI)

43.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PI4K_N PF19274 265 - 1427 0.0 PI4-kinase N-terminal region
PI3Ka PF00613 1463 - 1603 6.5e-23 Phosphoinositide 3-kinase family, accessory domain (PIK domain)
PI3_PI4_kinase PF00454 1727 - 1934 7e-36 Phosphatidylinositol 3- and 4-kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1196
Acc36I ACCTGC 1 cut(s) 841
AccB1I GGYRCC 3 cut(s) 91, 1429, 2005
AccBSI CCGCTC 4 cut(s) 255, 719, 4069, 4452
AccI GTMKAC 2 cut(s) 599, 1503
AccII CGCG 2 cut(s) 2613, 5449
AcoI YGGCCR 1 cut(s) 720
AcuI CTGAAG 7 cut(s) 1104, 1515, 2988, 3911, 4431, 4482, 5782
AcvI CACGTG 1 cut(s) 2868
AcyI GRCGYC 1 cut(s) 560
AfaI GTAC 8 cut(s) 890, 1455, 1783, 3055, 3844, 4623, 4953, 5340
AfeI AGCGCT 1 cut(s) 3663
AflIII ACRYGT 4 cut(s) 891, 1729, 2865, 4899
AgeI ACCGGT 2 cut(s) 81, 1219
AjiI CACGTC 1 cut(s) 4900
AjnI CCWGG 8 cut(s) 947, 1185, 2230, 2376, 2829, 3809, 5580, 5687
AjuI GAANNNNNNNTTGG 4 cut(s) 1119, 1151, 2766, 2798
Alw44I GTGCAC 1 cut(s) 5619
AlwNI CAGNNNCTG 4 cut(s) 1192, 3934, 4681, 5941
Ama87I CYCGRG 4 cut(s) 120, 3199, 4596, 5843
Aor51HI AGCGCT 1 cut(s) 3663
ApaLI GTGCAC 1 cut(s) 5619
ArsI GACNNNNNNTTYG 4 cut(s) 673, 705, 5344, 5376
AseI ATTAAT 1 cut(s) 5274
AsiGI ACCGGT 2 cut(s) 81, 1219
Asp700I GAANNNNTTC 1 cut(s) 2607
AspA2I CCTAGG 1 cut(s) 106
AspLEI GCGC 5 cut(s) 1197, 3664, 3900, 4261, 5449
AsuC2I CCSGG 4 cut(s) 44, 130, 3648, 5595
AsuII TTCGAA 1 cut(s) 5613
AsuNHI GCTAGC 1 cut(s) 1462
AvaI CYCGRG 4 cut(s) 120, 3199, 4596, 5843
AvaII GGWCC 7 cut(s) 514, 1326, 1886, 2105, 3564, 5155, 5910
AvrII CCTAGG 1 cut(s) 106
AxyI CCTNAGG 1 cut(s) 899
BaeGI GKGCMC 1 cut(s) 5623
BanI GGYRCC 3 cut(s) 91, 1429, 2005
BanII GRGCYC 9 cut(s) 21, 611, 937, 1134, 1342, 3174, 3383, 3527, 3873
BarI GAAGNNNNNNTAC 4 cut(s) 1077, 1109, 3577, 3609
BauI CACGAG 1 cut(s) 5555
BbrPI CACGTG 1 cut(s) 2868
BbsI GAAGAC 6 cut(s) 1301, 2494, 2828, 3419, 3917, 3945
BceAI ACGGC 6 cut(s) 131, 140, 594, 1217, 2483, 4478
BcgI CGANNNNNNTGC 2 cut(s) 14, 48
BciT130I CCWGG 8 cut(s) 949, 1187, 2232, 2378, 2831, 3811, 5582, 5689
BclI TGATCA 3 cut(s) 498, 667, 4144
BcnI CCSGG 4 cut(s) 44, 130, 3648, 5595
BfoI RGCGCY 1 cut(s) 3665
BfuAI ACCTGC 1 cut(s) 841
BlnI CCTAGG 1 cut(s) 106
BlpI GCTNAGC 1 cut(s) 5633
BmcAI AGTACT 3 cut(s) 1783, 3055, 4623
Bme18I GGWCC 7 cut(s) 514, 1326, 1886, 2105, 3564, 5155, 5910
BmeT110I CYCGRG 4 cut(s) 120, 3199, 4596, 5843
BmgBI CACGTC 1 cut(s) 4900
BmrI ACTGGG 3 cut(s) 846, 3530, 4543
BmtI GCTAGC 1 cut(s) 1466
BmuI ACTGGG 3 cut(s) 846, 3530, 4543
BoxI GACNNNNGTC 2 cut(s) 84, 1803
BpiI GAAGAC 6 cut(s) 1301, 2494, 2828, 3419, 3917, 3945
BplI GAGNNNNNCTC 6 cut(s) 3395, 3427, 4012, 4044, 5016, 5048
BpmI CTGGAG 6 cut(s) 399, 1326, 2399, 3114, 4560, 4646
Bpu10I CCTNAGC 1 cut(s) 728
Bpu1102I GCTNAGC 1 cut(s) 5633
Bpu14I TTCGAA 1 cut(s) 5613
BpuEI CTTGAG 2 cut(s) 3857, 4583
BpuMI CCSGG 4 cut(s) 44, 130, 3648, 5595
BsaAI YACGTR 2 cut(s) 892, 2868
BsaBI GATNNNNATC 3 cut(s) 1926, 3142, 4149
BsaHI GRCGYC 1 cut(s) 560
BsaI GGTCTC 2 cut(s) 138, 5802
BsaJI CCNNGG 9 cut(s) 106, 119, 1267, 1329, 2230, 2830, 3228, 3809, 4887
BsaWI WCCGGW 5 cut(s) 81, 88, 553, 1219, 3942
Bse118I RCCGGY 3 cut(s) 81, 368, 1219
Bse21I CCTNAGG 1 cut(s) 899
Bse3DI GCAATG 7 cut(s) 544, 1761, 2260, 2331, 3474, 4466, 5093
Bse8I GATNNNNATC 3 cut(s) 1926, 3142, 4149
BseBI CCWGG 8 cut(s) 949, 1187, 2232, 2378, 2831, 3811, 5582, 5689
BseDI CCNNGG 9 cut(s) 106, 119, 1267, 1329, 2230, 2830, 3228, 3809, 4887
BseJI GATNNNNATC 3 cut(s) 1926, 3142, 4149
BseMI GCAATG 7 cut(s) 544, 1761, 2260, 2331, 3474, 4466, 5093
BseRI GAGGAG 2 cut(s) 232, 2154
BseSI GKGCMC 1 cut(s) 5623
BseYI CCCAGC 2 cut(s) 3179, 5432
BsgI GTGCAG 4 cut(s) 1460, 3138, 4694, 5872
Bsh1236I CGCG 2 cut(s) 2613, 5449
Bsh1285I CGRYCG 3 cut(s) 82, 253, 5146
BshNI GGYRCC 3 cut(s) 91, 1429, 2005
BshTI ACCGGT 2 cut(s) 81, 1219
BsiEI CGRYCG 3 cut(s) 82, 253, 5146
BsiHKCI CYCGRG 4 cut(s) 120, 3199, 4596, 5843
BslFI GGGAC 5 cut(s) 1377, 3808, 4602, 5099, 5168
BsmBI CGTCTC 1 cut(s) 4775
BsmFI GGGAC 5 cut(s) 1377, 3808, 4602, 5099, 5168
BsmI GAATGC 6 cut(s) 1377, 2221, 2372, 2450, 4831, 4989
Bso31I GGTCTC 2 cut(s) 138, 5802
BsoBI CYCGRG 4 cut(s) 120, 3199, 4596, 5843
Bsp119I TTCGAA 1 cut(s) 5613
Bsp1720I GCTNAGC 1 cut(s) 5633
Bsp68I TCGCGA 1 cut(s) 2613
BspFNI CGCG 2 cut(s) 2613, 5449
BspHI TCATGA 1 cut(s) 501
BspMAI CTGCAG 7 cut(s) 882, 1750, 2980, 2995, 3001, 3301, 4189
BspMI ACCTGC 1 cut(s) 841
BspOI GCTAGC 1 cut(s) 1466
BspQI GCTCTTC 3 cut(s) 1122, 2226, 5232
BspT104I TTCGAA 1 cut(s) 5613
BspT107I GGYRCC 3 cut(s) 91, 1429, 2005
BspTNI GGTCTC 2 cut(s) 138, 5802
BsrBI CCGCTC 4 cut(s) 255, 719, 4069, 4452
BsrDI GCAATG 7 cut(s) 544, 1761, 2260, 2331, 3474, 4466, 5093
BsrFI RCCGGY 3 cut(s) 81, 368, 1219
BssAI RCCGGY 3 cut(s) 81, 368, 1219
BssECI CCNNGG 9 cut(s) 106, 119, 1267, 1329, 2230, 2830, 3228, 3809, 4887
BssNI GRCGYC 1 cut(s) 560
BssSI CACGAG 1 cut(s) 5555
BssT1I CCWWGG 4 cut(s) 106, 1267, 1329, 4887
Bst2BI CACGAG 1 cut(s) 5555
Bst2UI CCWGG 8 cut(s) 949, 1187, 2232, 2378, 2831, 3811, 5582, 5689
BstACI GRCGYC 1 cut(s) 560
BstAPI GCANNNNNTGC 3 cut(s) 3769, 4525, 4681
BstBAI YACGTR 2 cut(s) 892, 2868
BstBI TTCGAA 1 cut(s) 5613
BstEII GGTNACC 3 cut(s) 124, 626, 5720
BstFNI CGCG 2 cut(s) 2613, 5449
BstH2I RGCGCY 1 cut(s) 3665
BstHHI GCGC 5 cut(s) 1197, 3664, 3900, 4261, 5449
BstMCI CGRYCG 3 cut(s) 82, 253, 5146
BstNI CCWGG 8 cut(s) 949, 1187, 2232, 2378, 2831, 3811, 5582, 5689
BstPAI GACNNNNGTC 2 cut(s) 84, 1803
BstPI GGTNACC 3 cut(s) 124, 626, 5720
BstSLI GKGCMC 1 cut(s) 5623
BstUI CGCG 2 cut(s) 2613, 5449
BstV2I GAAGAC 6 cut(s) 1301, 2494, 2828, 3419, 3917, 3945
BstX2I RGATCY 3 cut(s) 1685, 4351, 5029
BstXI CCANNNNNNTGG 4 cut(s) 1045, 2115, 3245, 5747
BstYI RGATCY 3 cut(s) 1685, 4351, 5029
Bsu36I CCTNAGG 1 cut(s) 899
BtgZI GCGATG 1 cut(s) 1289
BtrI CACGTC 1 cut(s) 4900
BtsI GCAGTG 4 cut(s) 3150, 4961, 5476, 5913
BtuMI TCGCGA 1 cut(s) 2613
BveI ACCTGC 1 cut(s) 841
CaiI CAGNNNCTG 4 cut(s) 1192, 3934, 4681, 5941
CciI TCATGA 1 cut(s) 501
CfoI GCGC 5 cut(s) 1197, 3664, 3900, 4261, 5449
Cfr10I RCCGGY 3 cut(s) 81, 368, 1219
CseI GACGC 2 cut(s) 568, 610
Csp6I GTAC 8 cut(s) 889, 1454, 1782, 3054, 3843, 4622, 4952, 5339
CspAI ACCGGT 2 cut(s) 81, 1219
CspCI CAANNNNNGTGG 4 cut(s) 1085, 1120, 2646, 2681
CviQI GTAC 8 cut(s) 889, 1454, 1782, 3054, 3843, 4622, 4952, 5339
DraI TTTAAA 3 cut(s) 1959, 3916, 4098
EaeI YGGCCR 1 cut(s) 720
EciI GGCGGA 5 cut(s) 188, 723, 729, 1123, 1199
Ecl136II GAGCTC 4 cut(s) 19, 609, 1132, 1340
Eco130I CCWWGG 4 cut(s) 106, 1267, 1329, 4887
Eco147I AGGCCT 3 cut(s) 1839, 3032, 3634
Eco24I GRGCYC 9 cut(s) 21, 611, 937, 1134, 1342, 3174, 3383, 3527, 3873
Eco31I GGTCTC 2 cut(s) 138, 5802
Eco32I GATATC 1 cut(s) 4715
Eco47I GGWCC 7 cut(s) 514, 1326, 1886, 2105, 3564, 5155, 5910
Eco47III AGCGCT 1 cut(s) 3663
Eco53kI GAGCTC 4 cut(s) 19, 609, 1132, 1340
Eco57I CTGAAG 7 cut(s) 1104, 1515, 2988, 3911, 4431, 4482, 5782
Eco72I CACGTG 1 cut(s) 2868
Eco81I CCTNAGG 1 cut(s) 899
Eco88I CYCGRG 4 cut(s) 120, 3199, 4596, 5843
Eco91I GGTNACC 3 cut(s) 124, 626, 5720
EcoICRI GAGCTC 4 cut(s) 19, 609, 1132, 1340
EcoO109I RGGNCCY 2 cut(s) 1189, 3954
EcoO65I GGTNACC 3 cut(s) 124, 626, 5720
EcoRI GAATTC 2 cut(s) 350, 2671
EcoRII CCWGG 8 cut(s) 947, 1185, 2230, 2376, 2829, 3809, 5580, 5687
EcoRV GATATC 1 cut(s) 4715
EcoT14I CCWWGG 4 cut(s) 106, 1267, 1329, 4887
EcoT22I ATGCAT 1 cut(s) 3556
EcoT38I GRGCYC 9 cut(s) 21, 611, 937, 1134, 1342, 3174, 3383, 3527, 3873
ErhI CCWWGG 4 cut(s) 106, 1267, 1329, 4887
Esp3I CGTCTC 1 cut(s) 4775
FalI AAGNNNNNCTT 2 cut(s) 5205, 5237
FaqI GGGAC 5 cut(s) 1377, 3808, 4602, 5099, 5168
FauI CCCGC 1 cut(s) 4062
FauNDI CATATG 3 cut(s) 2812, 4609, 5293
FbaI TGATCA 3 cut(s) 498, 667, 4144
FblI GTMKAC 2 cut(s) 599, 1503
FriOI GRGCYC 9 cut(s) 21, 611, 937, 1134, 1342, 3174, 3383, 3527, 3873
FspI TGCGCA 1 cut(s) 1196
GlaI GCGC 5 cut(s) 1196, 3663, 3899, 4260, 5448
GsaI CCCAGC 2 cut(s) 3183, 5436
GsuI CTGGAG 6 cut(s) 399, 1326, 2399, 3114, 4560, 4646
HaeII RGCGCY 1 cut(s) 3665
HgaI GACGC 2 cut(s) 568, 610
HhaI GCGC 5 cut(s) 1197, 3664, 3900, 4261, 5449
Hin1I GRCGYC 1 cut(s) 560
Hin6I GCGC 5 cut(s) 1195, 3662, 3898, 4259, 5447
HinP1I GCGC 5 cut(s) 1195, 3662, 3898, 4259, 5447
HincII GTYRAC 3 cut(s) 600, 993, 4873
HindII GTYRAC 3 cut(s) 600, 993, 4873
HindIII AAGCTT 6 cut(s) 62, 1531, 1670, 2849, 5057, 5630
Hpy99I CGWCG 9 cut(s) 161, 215, 218, 221, 601, 604, 2244, 4983, 5739
Hsp92I GRCGYC 1 cut(s) 560
HspAI GCGC 5 cut(s) 1195, 3662, 3898, 4259, 5447
KroI GCCGGC 1 cut(s) 368
KroNI GCCGGC 1 cut(s) 370
Ksp22I TGATCA 3 cut(s) 498, 667, 4144
LguI GCTCTTC 3 cut(s) 1122, 2226, 5232
MbiI CCGCTC 4 cut(s) 255, 719, 4069, 4452
MfeI CAATTG 1 cut(s) 5651
MflI RGATCY 3 cut(s) 1685, 4351, 5029
MmeI TCCRAC 6 cut(s) 1304, 2187, 4983, 5176, 5248, 5428
Mph1103I ATGCAT 1 cut(s) 3556
MroNI GCCGGC 1 cut(s) 368
MroXI GAANNNNTTC 1 cut(s) 2607
MslI CAYNNNNRTG 6 cut(s) 2113, 3559, 3857, 4116, 5163, 5745
MspA1I CMGCKG 5 cut(s) 877, 1847, 2996, 4082, 4423
MunI CAATTG 1 cut(s) 5651
Mva1269I GAATGC 6 cut(s) 1377, 2221, 2372, 2450, 4831, 4989
MvaI CCWGG 8 cut(s) 949, 1187, 2232, 2378, 2831, 3811, 5582, 5689
MvnI CGCG 2 cut(s) 2613, 5449
NaeI GCCGGC 1 cut(s) 370
NciI CCSGG 4 cut(s) 44, 130, 3648, 5595
NdeI CATATG 3 cut(s) 2812, 4609, 5293
NgoMIV GCCGGC 1 cut(s) 368
NheI GCTAGC 1 cut(s) 1462
NmeAIII GCCGAG 2 cut(s) 514, 3253
NmuCI GTSAC 5 cut(s) 124, 556, 679, 2420, 2752
NruI TCGCGA 1 cut(s) 2613
NsbI TGCGCA 1 cut(s) 1196
NsiI ATGCAT 1 cut(s) 3556
NspV TTCGAA 1 cut(s) 5613
PaeR7I CTCGAG 1 cut(s) 4596
PagI TCATGA 1 cut(s) 501
PceI AGGCCT 3 cut(s) 1839, 3032, 3634
PciSI GCTCTTC 3 cut(s) 1122, 2226, 5232
PcsI WCGNNNNNNNCGW 1 cut(s) 593
PctI GAATGC 6 cut(s) 1377, 2221, 2372, 2450, 4831, 4989
PdiI GCCGGC 1 cut(s) 370
PdmI GAANNNNTTC 1 cut(s) 2607
PfeI GAWTC 6 cut(s) 1850, 2687, 2714, 3373, 4796, 5071
PflFI GACNNNGTC 2 cut(s) 130, 595
PfoI TCCNGGA 2 cut(s) 2376, 5580
PinAI ACCGGT 2 cut(s) 81, 1219
Ple19I CGATCG 1 cut(s) 5146
PmaCI CACGTG 1 cut(s) 2868
PmlI CACGTG 1 cut(s) 2868
Ppu21I YACGTR 2 cut(s) 892, 2868
PshAI GACNNNNGTC 2 cut(s) 84, 1803
PshBI ATTAAT 1 cut(s) 5274
Psp124BI GAGCTC 4 cut(s) 21, 611, 1134, 1342
Psp6I CCWGG 8 cut(s) 947, 1185, 2230, 2376, 2829, 3809, 5580, 5687
PspCI CACGTG 1 cut(s) 2868
PspEI GGTNACC 3 cut(s) 124, 626, 5720
PspFI CCCAGC 2 cut(s) 3179, 5432
PspGI CCWGG 8 cut(s) 947, 1185, 2230, 2376, 2829, 3809, 5580, 5687
PspXI VCTCGAGB 1 cut(s) 4596
PstI CTGCAG 7 cut(s) 882, 1750, 2980, 2995, 3001, 3301, 4189
PstNI CAGNNNCTG 4 cut(s) 1192, 3934, 4681, 5941
PsuI RGATCY 3 cut(s) 1685, 4351, 5029
PsyI GACNNNGTC 2 cut(s) 130, 595
PvuI CGATCG 1 cut(s) 5146
PvuII CAGCTG 5 cut(s) 877, 1847, 2996, 4082, 4423
RruI TCGCGA 1 cut(s) 2613
RsaI GTAC 8 cut(s) 890, 1455, 1783, 3055, 3844, 4623, 4953, 5340
RsaNI GTAC 8 cut(s) 889, 1454, 1782, 3054, 3843, 4622, 4952, 5339
RseI CAYNNNNRTG 6 cut(s) 2113, 3559, 3857, 4116, 5163, 5745
SacI GAGCTC 4 cut(s) 21, 611, 1134, 1342
SalI GTCGAC 1 cut(s) 598
SapI GCTCTTC 3 cut(s) 1122, 2226, 5232
SbfI CCTGCAGG 1 cut(s) 1750
ScaI AGTACT 3 cut(s) 1783, 3055, 4623
SdaI CCTGCAGG 1 cut(s) 1750
Sfr274I CTCGAG 1 cut(s) 4596
SfuI TTCGAA 1 cut(s) 5613
SgrDI CGTCGACG 1 cut(s) 598
SinI GGWCC 7 cut(s) 514, 1326, 1886, 2105, 3564, 5155, 5910
SlaI CTCGAG 1 cut(s) 4596
SmiMI CAYNNNNRTG 6 cut(s) 2113, 3559, 3857, 4116, 5163, 5745
SmlI CTYRAG 3 cut(s) 3872, 4562, 4596
SmoI CTYRAG 3 cut(s) 3872, 4562, 4596
Sse8387I CCTGCAGG 1 cut(s) 1750
SseBI AGGCCT 3 cut(s) 1839, 3032, 3634
SspI AATATT 2 cut(s) 2971, 3608
SstI GAGCTC 4 cut(s) 21, 611, 1134, 1342
StuI AGGCCT 3 cut(s) 1839, 3032, 3634
StyI CCWWGG 4 cut(s) 106, 1267, 1329, 4887
TatI WGTACW 4 cut(s) 1781, 3053, 4621, 4951
TauI GCSGC 7 cut(s) 708, 722, 1579, 4852, 5211, 5447, 5867
TfiI GAWTC 6 cut(s) 1850, 2687, 2714, 3373, 4796, 5071
TseFI GTSAC 5 cut(s) 124, 556, 679, 2420, 2752
Tsp45I GTSAC 5 cut(s) 124, 556, 679, 2420, 2752
TspGWI ACGGA 9 cut(s) 199, 423, 2935, 3041, 3323, 3413, 4799, 5430, 5870
Tth111I GACNNNGTC 2 cut(s) 130, 595
VneI GTGCAC 1 cut(s) 5619
VpaK11BI GGWCC 7 cut(s) 514, 1326, 1886, 2105, 3564, 5155, 5910
VspI ATTAAT 1 cut(s) 5274
XbaI TCTAGA 1 cut(s) 2441
XcmI CCANNNNNNNNNTGG 1 cut(s) 2664
XhoI CTCGAG 1 cut(s) 4596
XmaJI CCTAGG 1 cut(s) 106
XmiI GTMKAC 2 cut(s) 599, 1503
XmnI GAANNNNTTC 1 cut(s) 2607
ZrmI AGTACT 3 cut(s) 1783, 3055, 4623
Zsp2I ATGCAT 1 cut(s) 3556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.