pycom10g14010

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
17445930 .. 17446208
279 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g14010.1

Sequence Viewer

Length: 279 bp
ATGGGGGTTAATCGGGAGAAGATGGCAGTTCAACATGCTGACGAACCTGGTCATTGCCCAGAGCCATTAACTACTCCTGACCAACACCTAGGTGCAGGTGCCTTTTGTGCAGAGAAGTTTACCTCCGGCCCAGCAGCAGGTAAATTTTGCTGGGATCGGCAACCGGATTACAGTGCTTTAAGAGAAAGCAGCTTTGGCCATGGGATCCTTGAGGTACTCCTTTTTCTGTGTTTCTGTTTGGTAAACATCCAGTTTGACAATGCATTCAATTTTCTATAA

Protein Analysis

93

Amino Acids

10.16

Weight (kDa)

5.11

Isoelectric Point (pI)

37.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019737)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 86
Acc36I ACCTGC 2 cut(s) 86, 128
AccB1I GGYRCC 1 cut(s) 98
AclWI GGATC 3 cut(s) 162, 199, 212
AcoI YGGCCR 1 cut(s) 196
AcsI RAATTY 1 cut(s) 143
AfaI GTAC 1 cut(s) 216
AfiI CCNNNNNNNGG 1 cut(s) 137
AgsI TTSAA 2 cut(s) 32, 268
AjnI CCWGG 1 cut(s) 46
AjuI GAANNNNNNNTTGG 2 cut(s) 177, 209
AleI CACNNNNGTG 1 cut(s) 90
AluBI AGCT 1 cut(s) 192
AluI AGCT 1 cut(s) 192
AlwI GGATC 3 cut(s) 162, 199, 212
AoxI GGCC 2 cut(s) 127, 196
ApeKI GCWGC 2 cut(s) 134, 189
ApoI RAATTY 1 cut(s) 143
AspA2I CCTAGG 1 cut(s) 88
AspS9I GGNCC 1 cut(s) 128
AvrII CCTAGG 1 cut(s) 88
BalI TGGCCA 1 cut(s) 198
BamHI GGATCC 1 cut(s) 204
BanI GGYRCC 1 cut(s) 98
BbvI GCAGC 2 cut(s) 146, 201
BccI CCATC 1 cut(s) 16
BciT130I CCWGG 1 cut(s) 48
BfaI CTAG 1 cut(s) 89
BfuAI ACCTGC 2 cut(s) 86, 128
BisI GCNGC 2 cut(s) 135, 190
BlnI CCTAGG 1 cut(s) 88
BlsI GCNGC 2 cut(s) 136, 191
Bme1390I CCNGG 1 cut(s) 48
BmgT120I GGNCC 1 cut(s) 128
BmiI GGNNCC 2 cut(s) 100, 206
BmrFI CCNGG 1 cut(s) 48
BpuEI CTTGAG 1 cut(s) 230
BsaJI CCNNGG 2 cut(s) 88, 199
BsaWI WCCGGW 1 cut(s) 163
Bsc4I CCNNNNNNNGG 1 cut(s) 137
Bse1I ACTGG 1 cut(s) 250
Bse3DI GCAATG 1 cut(s) 52
BseBI CCWGG 1 cut(s) 48
BseDI CCNNGG 2 cut(s) 88, 199
BseGI GGATG 1 cut(s) 246
BseLI CCNNNNNNNGG 1 cut(s) 137
BseMI GCAATG 1 cut(s) 52
BseNI ACTGG 1 cut(s) 250
BseXI GCAGC 2 cut(s) 146, 201
BseYI CCCAGC 2 cut(s) 130, 150
BsgI GTGCAG 2 cut(s) 114, 129
BshFI GGCC 2 cut(s) 129, 198
BshNI GGYRCC 1 cut(s) 98
BsiSI CCGG 2 cut(s) 126, 164
BslI CCNNNNNNNGG 1 cut(s) 137
BsmI GAATGC 1 cut(s) 263
BsnI GGCC 2 cut(s) 129, 198
Bsp143I GATC 2 cut(s) 154, 204
Bsp19I CCATGG 1 cut(s) 199
BspANI GGCC 2 cut(s) 129, 198
BspLI GGNNCC 2 cut(s) 100, 206
BspMI ACCTGC 2 cut(s) 86, 128
BspPI GGATC 3 cut(s) 162, 199, 212
BspT107I GGYRCC 1 cut(s) 98
BsrDI GCAATG 1 cut(s) 52
BsrI ACTGG 1 cut(s) 250
BssECI CCNNGG 2 cut(s) 88, 199
BssMI GATC 2 cut(s) 154, 204
BssT1I CCWWGG 2 cut(s) 88, 199
Bst2UI CCWGG 1 cut(s) 48
Bst4CI ACNGT 1 cut(s) 173
BstDSI CCRYGG 1 cut(s) 199
BstF5I GGATG 1 cut(s) 246
BstKTI GATC 2 cut(s) 157, 207
BstMBI GATC 2 cut(s) 154, 204
BstMWI GCNNNNNNNGC 2 cut(s) 107, 195
BstNI CCWGG 1 cut(s) 48
BstNSI RCATGY 1 cut(s) 38
BstSCI CCNGG 1 cut(s) 46
BstV1I GCAGC 2 cut(s) 146, 201
BstX2I RGATCY 1 cut(s) 204
BstYI RGATCY 1 cut(s) 204
BsuRI GGCC 2 cut(s) 129, 198
BtgI CCRYGG 1 cut(s) 199
BtsCI GGATG 1 cut(s) 246
BtsIMutI CAGTG 1 cut(s) 178
BveI ACCTGC 2 cut(s) 86, 128
Cfr13I GGNCC 1 cut(s) 128
CsiI ACCWGGT 1 cut(s) 46
Csp6I GTAC 1 cut(s) 215
CviAII CATG 2 cut(s) 35, 200
CviJI RGCY 4 cut(s) 64, 129, 192, 198
CviKI_1 RGCY 4 cut(s) 64, 129, 192, 198
CviQI GTAC 1 cut(s) 215
DpnI GATC 2 cut(s) 156, 206
DpnII GATC 2 cut(s) 154, 204
EaeI YGGCCR 1 cut(s) 196
Eco130I CCWWGG 2 cut(s) 88, 199
EcoRII CCWGG 1 cut(s) 46
EcoT14I CCWWGG 2 cut(s) 88, 199
EcoT22I ATGCAT 1 cut(s) 265
ErhI CCWWGG 2 cut(s) 88, 199
FaeI CATG 2 cut(s) 38, 203
FaiI YATR 3 cut(s) 36, 201, 277
FatI CATG 2 cut(s) 34, 199
Fnu4HI GCNGC 2 cut(s) 135, 190
FokI GGATG 1 cut(s) 233
Fsp4HI GCNGC 2 cut(s) 135, 190
FspBI CTAG 1 cut(s) 89
GluI GCNGC 2 cut(s) 135, 190
GsaI CCCAGC 2 cut(s) 134, 154
HaeIII GGCC 2 cut(s) 129, 198
HapII CCGG 2 cut(s) 126, 164
Hin1II CATG 2 cut(s) 38, 203
HpaII CCGG 2 cut(s) 126, 164
Hpy166II GTNNAC 2 cut(s) 120, 244
Hpy188III TCNNGA 2 cut(s) 14, 77
Hpy8I GTNNAC 2 cut(s) 120, 244
HpyCH4III ACNGT 1 cut(s) 173
HpyCH4V TGCA 3 cut(s) 95, 110, 263
HpyF10VI GCNNNNNNNGC 2 cut(s) 107, 195
Hsp92II CATG 2 cut(s) 38, 203
Kzo9I GATC 2 cut(s) 154, 204
Lsp1109I GCAGC 2 cut(s) 146, 201
MabI ACCWGGT 1 cut(s) 46
MaeI CTAG 1 cut(s) 89
MalI GATC 2 cut(s) 156, 206
MboI GATC 2 cut(s) 154, 204
MboII GAAGA 1 cut(s) 31
MflI RGATCY 1 cut(s) 204
MlsI TGGCCA 1 cut(s) 198
MluCI AATT 2 cut(s) 143, 268
MluNI TGGCCA 1 cut(s) 198
MnlI CCTC 2 cut(s) 133, 205
Mox20I TGGCCA 1 cut(s) 198
Mph1103I ATGCAT 1 cut(s) 265
MscI TGGCCA 1 cut(s) 198
MseI TTAA 3 cut(s) 9, 68, 179
MslI CAYNNNNRTG 1 cut(s) 90
Msp20I TGGCCA 1 cut(s) 198
MspI CCGG 2 cut(s) 126, 164
MspR9I CCNGG 1 cut(s) 48
Mva1269I GAATGC 1 cut(s) 263
MvaI CCWGG 1 cut(s) 48
MwoI GCNNNNNNNGC 2 cut(s) 107, 195
NcoI CCATGG 1 cut(s) 199
NdeII GATC 2 cut(s) 154, 204
NlaIII CATG 2 cut(s) 38, 203
NlaIV GGNNCC 2 cut(s) 100, 206
NsiI ATGCAT 1 cut(s) 265
NspI RCATGY 1 cut(s) 38
OliI CACNNNNGTG 1 cut(s) 90
PaqCI CACCTGC 1 cut(s) 86
PctI GAATGC 1 cut(s) 263
PkrI GCNGC 2 cut(s) 136, 191
Psp6I CCWGG 1 cut(s) 46
PspFI CCCAGC 2 cut(s) 130, 150
PspGI CCWGG 1 cut(s) 46
PspN4I GGNNCC 2 cut(s) 100, 206
PspPI GGNCC 1 cut(s) 128
PsuI RGATCY 1 cut(s) 204
RsaI GTAC 1 cut(s) 216
RsaNI GTAC 1 cut(s) 215
RseI CAYNNNNRTG 1 cut(s) 90
SaqAI TTAA 3 cut(s) 9, 68, 179
SatI GCNGC 2 cut(s) 135, 190
Sau3AI GATC 2 cut(s) 154, 204
Sau96I GGNCC 1 cut(s) 128
ScrFI CCNGG 1 cut(s) 48
SetI ASST 8 cut(s) 49, 90, 94, 100, 125, 142, 194, 216
SexAI ACCWGGT 1 cut(s) 46
SmiMI CAYNNNNRTG 1 cut(s) 90
SmlI CTYRAG 1 cut(s) 209
SmoI CTYRAG 1 cut(s) 209
Sse9I AATT 2 cut(s) 143, 268
SspMI CTAG 1 cut(s) 89
StyD4I CCNGG 1 cut(s) 46
StyI CCWWGG 2 cut(s) 88, 199
TaaI ACNGT 1 cut(s) 173
TasI AATT 2 cut(s) 143, 268
Tru1I TTAA 3 cut(s) 9, 68, 179
Tru9I TTAA 3 cut(s) 9, 68, 179
TscAI CASTG 1 cut(s) 178
TseI GCWGC 2 cut(s) 134, 189
TspRI CASTG 1 cut(s) 178
XapI RAATTY 1 cut(s) 143
XceI RCATGY 1 cut(s) 38
XmaJI CCTAGG 1 cut(s) 88
XspI CTAG 1 cut(s) 89
Zsp2I ATGCAT 1 cut(s) 265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.